BLASTX nr result

ID: Forsythia22_contig00052371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00052371
         (544 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009627609.1| PREDICTED: putative pentatricopeptide repeat...    49   6e-07
ref|XP_008446484.1| PREDICTED: putative pentatricopeptide repeat...    46   2e-06
ref|XP_012463496.1| PREDICTED: putative pentatricopeptide repeat...    47   3e-06
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...    46   7e-06
gb|KGN52007.1| hypothetical protein Csa_5G607460 [Cucumis sativus]     46   7e-06
ref|XP_010250314.1| PREDICTED: putative pentatricopeptide repeat...    46   9e-06

>ref|XP_009627609.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Nicotiana tomentosiformis]
          Length = 743

 Score = 49.3 bits (116), Expect(2) = 6e-07
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = -3

Query: 122 SHTGNAFVGSAVI*TCSSFRRIKYAEAVFEKMSHKNILPW 3
           SH+ N FVGSA++   S  R IKYAE  F +MS+KNI+ W
Sbjct: 300 SHSDNVFVGSALVDMYSKCRNIKYAETTFSRMSNKNIISW 339



 Score = 30.4 bits (67), Expect(2) = 6e-07
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 202 GDIFTASGGLVALREGMPIHYCTIRT 125
           G I TA GGL A+ EG  IH   +RT
Sbjct: 274 GSILTACGGLQAIEEGKQIHAYIVRT 299


>ref|XP_008446484.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Cucumis melo]
          Length = 743

 Score = 46.2 bits (108), Expect(2) = 2e-06
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = -3

Query: 110 NAFVGSAVI*TCSSFRRIKYAEAVFEKMSHKNILPW 3
           N FVGSA++      R +KYAEAVF KM HKN++ W
Sbjct: 304 NIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISW 339



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -1

Query: 202 GDIFTASGGLVALREGMPIHYCTIRT 125
           G + TA GGL+AL EG  IH   IRT
Sbjct: 274 GSVLTACGGLLALDEGKQIHAYIIRT 299


>ref|XP_012463496.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Gossypium raimondii]
           gi|763813598|gb|KJB80450.1| hypothetical protein
           B456_013G098500 [Gossypium raimondii]
          Length = 743

 Score = 46.6 bits (109), Expect(2) = 3e-06
 Identities = 19/40 (47%), Positives = 29/40 (72%)
 Frame = -3

Query: 122 SHTGNAFVGSAVI*TCSSFRRIKYAEAVFEKMSHKNILPW 3
           +H  N FVGSA++      +RI +AEAVF++M+HKN++ W
Sbjct: 300 NHMDNVFVGSALVDMYCKCKRIAFAEAVFKRMTHKNVVSW 339



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -1

Query: 202 GDIFTASGGLVALREGMPIHYCTIRT 125
           G + TA GGL+AL+EG   H   IRT
Sbjct: 274 GSMLTACGGLMALKEGKQAHAFVIRT 299


>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Cucumis sativus]
          Length = 743

 Score = 46.2 bits (108), Expect(2) = 7e-06
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = -3

Query: 110 NAFVGSAVI*TCSSFRRIKYAEAVFEKMSHKNILPW 3
           N FVGSA++      R +KYAEAVF KM HKN++ W
Sbjct: 304 NIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISW 339



 Score = 30.0 bits (66), Expect(2) = 7e-06
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 202 GDIFTASGGLVALREGMPIHYCTIRT 125
           G + TA GG +AL EG  IH   IRT
Sbjct: 274 GSVLTACGGFLALDEGKQIHAYIIRT 299


>gb|KGN52007.1| hypothetical protein Csa_5G607460 [Cucumis sativus]
          Length = 562

 Score = 46.2 bits (108), Expect(2) = 7e-06
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = -3

Query: 110 NAFVGSAVI*TCSSFRRIKYAEAVFEKMSHKNILPW 3
           N FVGSA++      R +KYAEAVF KM HKN++ W
Sbjct: 123 NIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISW 158



 Score = 30.0 bits (66), Expect(2) = 7e-06
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 202 GDIFTASGGLVALREGMPIHYCTIRT 125
           G + TA GG +AL EG  IH   IRT
Sbjct: 93  GSVLTACGGFLALDEGKQIHAYIIRT 118


>ref|XP_010250314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Nelumbo nucifera]
           gi|719982062|ref|XP_010250315.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At1g68930
           [Nelumbo nucifera]
          Length = 743

 Score = 45.8 bits (107), Expect(2) = 9e-06
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = -3

Query: 110 NAFVGSAVI*TCSSFRRIKYAEAVFEKMSHKNILPW 3
           N FVGSA++   S    IKYAEAVF++M+HKNI+ W
Sbjct: 304 NIFVGSALVDMYSKSGSIKYAEAVFKRMAHKNIVSW 339



 Score = 30.0 bits (66), Expect(2) = 9e-06
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 202 GDIFTASGGLVALREGMPIHYCTIRT 125
           G + TA GGLVAL +G   H   IRT
Sbjct: 274 GSVLTACGGLVALEQGKQSHAYIIRT 299


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