BLASTX nr result

ID: Forsythia22_contig00052284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00052284
         (295 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38641.1| unknown [Medicago truncatula]                           62   1e-07
ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...    52   9e-07

>gb|AFK38641.1| unknown [Medicago truncatula]
          Length = 57

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 34/56 (60%), Positives = 36/56 (64%), Gaps = 11/56 (19%)
 Frame = +3

Query: 150 MRRPLLRKETGERKSYAIDRP-----------FFLILFEAGQIENEMHKINRGRVP 284
           MRRP LRKETGE KSYAIDRP           FF ILFEAG+IENEM K  +   P
Sbjct: 1   MRRPFLRKETGEIKSYAIDRPFRSDFESIVLSFFSILFEAGRIENEMQKYGKSSKP 56


>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
           gi|657370785|gb|KEH16846.1| hypothetical protein
           MTR_0082s0050 [Medicago truncatula]
          Length = 334

 Score = 52.4 bits (124), Expect(2) = 9e-07
 Identities = 31/55 (56%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -1

Query: 193 LFLSPVSFRRRGLRIPNPV-GPDGFVCPSLANRIPAQRHCLCAPYRSRLVFQRLG 32
           LF+SPVSFRR+GLRIPNPV G      P  A  I + R+ + APYRSR VF   G
Sbjct: 196 LFISPVSFRRKGLRIPNPVGGRTALFAP--AWLIASPRNDILAPYRSRSVFATAG 248



 Score = 26.9 bits (58), Expect(2) = 9e-07
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -3

Query: 44  STAGKAVVEAKPIA 3
           +TAG+AVVEAKPIA
Sbjct: 245 ATAGEAVVEAKPIA 258


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