BLASTX nr result
ID: Forsythia22_contig00052166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00052166
(652 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007032202.1| Cysteine-rich RLK (RECEPTOR-like protein kin... 58 4e-17
ref|XP_008779879.1| PREDICTED: uncharacterized protein LOC103699... 59 1e-14
ref|XP_003524766.2| PREDICTED: uncharacterized protein LOC100820... 54 2e-14
ref|XP_010495376.1| PREDICTED: uncharacterized protein LOC104772... 54 4e-14
ref|XP_008778555.1| PREDICTED: uncharacterized protein LOC103698... 52 8e-14
ref|XP_012453130.1| PREDICTED: uncharacterized protein LOC105775... 52 2e-13
ref|XP_007024187.1| Cysteine-rich RLK (RECEPTOR-like protein kin... 51 4e-13
gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus v... 57 6e-13
ref|XP_012849842.1| PREDICTED: uncharacterized protein LOC105969... 55 9e-13
gb|KHN30942.1| Histone deacetylase 6 [Glycine soja] 59 2e-12
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 60 3e-12
ref|XP_009142130.1| PREDICTED: uncharacterized protein LOC103866... 54 4e-12
ref|XP_006587971.1| PREDICTED: uncharacterized protein LOC102669... 49 2e-11
ref|XP_007023091.1| Uncharacterized protein TCM_027093 [Theobrom... 49 2e-11
ref|XP_010647451.1| PREDICTED: uncharacterized protein LOC104878... 53 2e-11
ref|XP_009109940.1| PREDICTED: uncharacterized protein LOC103835... 57 4e-11
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 55 5e-11
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 55 5e-11
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei... 55 5e-11
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei... 55 6e-11
>ref|XP_007032202.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao] gi|508711231|gb|EOY03128.1| Cysteine-rich RLK
(RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 647
Score = 58.2 bits (139), Expect(2) = 4e-17
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +2
Query: 230 YDSWILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVLIQP 388
++SWI+DT ATDHI CSL FT+F ++ +V LPN + THIG IV I P
Sbjct: 175 HNSWIVDTGATDHIACSLHSFTTFKSIQGVFVELPNNAKALVTHIG-IVQISP 226
Score = 57.0 bits (136), Expect(2) = 4e-17
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Frame = +1
Query: 388 LILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGLLYL 567
L L NVL VPSFKFNLISVS+L+ S++ LIF++K +I + S IG+ +V GL +
Sbjct: 228 LQLDNVLFVPSFKFNLISVSQLSKSRNHCLIFTNKHCIILEIPSWTMIGVAEVKVGLHLM 287
Query: 568 Q----DTPPRHPHRAAAT-------TSPNDSNIWHHRL 648
Q P+ A+ T + N+WHHRL
Sbjct: 288 QCKLLGKRPQGSISASTTIKIPICNSVSLRFNLWHHRL 325
>ref|XP_008779879.1| PREDICTED: uncharacterized protein LOC103699645, partial [Phoenix
dactylifera]
Length = 521
Score = 58.9 bits (141), Expect(2) = 1e-14
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Frame = +1
Query: 382 SALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGLL 561
S +IL +VL VPSF FNL+S K+ S + LIF S +Q LSS TIG+ +V NGL
Sbjct: 347 STIILKDVLCVPSFSFNLLSAKKIAESLNCCLIFFSNRCFLQDLSSWTTIGMGEVRNGLY 406
Query: 562 YLQD------------TPPRHPHRAAATTSPND---SNIWHHRLG 651
+L + H + + + ND S++WH RLG
Sbjct: 407 HLLRMEVASSILVTTLSKLSHKDFSVSASIMNDRSVSDLWHCRLG 451
Score = 47.8 bits (112), Expect(2) = 1e-14
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTI 373
WI+DT ATDH+ C + F++ T + + V LPN V THIGT+
Sbjct: 299 WIIDTGATDHMICDTELFSTVTAIVSYSVKLPNGIEVPVTHIGTV 343
>ref|XP_003524766.2| PREDICTED: uncharacterized protein LOC100820019 isoform X1 [Glycine
max] gi|571455200|ref|XP_006580017.1| PREDICTED:
uncharacterized protein LOC100820019 isoform X2 [Glycine
max] gi|571455202|ref|XP_006580018.1| PREDICTED:
uncharacterized protein LOC100820019 isoform X3 [Glycine
max] gi|571455204|ref|XP_006580019.1| PREDICTED:
uncharacterized protein LOC100820019 isoform X4 [Glycine
max]
Length = 495
Score = 54.3 bits (129), Expect(2) = 2e-14
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +1
Query: 388 LILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTK 543
+ L NVL +P+F FNLIS+SKL S + ALIFSS ++Q S+RM IG+ +
Sbjct: 444 ITLFNVLYIPTFTFNLISISKLVSSTNCALIFSSTSCMLQDASNRMKIGIVE 495
Score = 51.6 bits (122), Expect(2) = 2e-14
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +2
Query: 236 SWILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVLIQ--PLFYTMY 406
SWILD+ ATDH+ CSL S+ ++ V+LPN V ATH GT+ L + LF +Y
Sbjct: 393 SWILDSGATDHVTCSLNNLHSYERINPVTVMLPNGNHVHATHSGTVHLSRTITLFNVLY 451
>ref|XP_010495376.1| PREDICTED: uncharacterized protein LOC104772464 [Camelina sativa]
Length = 1032
Score = 53.9 bits (128), Expect(2) = 4e-14
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSK-LTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNG 555
+S+LILHNVL VPSFKFN+ISVS L + A F CY+ +++ M + N
Sbjct: 522 SSSLILHNVLHVPSFKFNIISVSSLLNHDQYSAHFFPFYCYIQESIQGLMIGRGNLMHNL 581
Query: 556 LLYLQDTPPRHPHRAAATTSPNDSNIWHHRLG 651
+Y D P + D +WH RLG
Sbjct: 582 YIYSNDRPFSASQSHFTGSLKVDGLLWHQRLG 613
Score = 51.2 bits (121), Expect(2) = 4e-14
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 230 YDSWILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVLIQPL 391
+ SWI+DT AT H+ L F TT+S V LPN+ RV TH GT+ L L
Sbjct: 472 HGSWIIDTGATSHVCSDLALFNETTTVSGVTVSLPNDARVDITHCGTVHLSSSL 525
>ref|XP_008778555.1| PREDICTED: uncharacterized protein LOC103698337 [Phoenix
dactylifera]
Length = 848
Score = 52.4 bits (124), Expect(2) = 8e-14
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Frame = +1
Query: 388 LILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGLLYL 567
L L +VL VP F FNLIS SKL S + L+F S IQ L + TI + K+ +GL +L
Sbjct: 314 LTLTDVLCVPKFSFNLISASKLIASNNCCLMFISASCFIQDLLNWRTIRMGKLEDGLYHL 373
Query: 568 Q---------------DTPPRHPHRAAATTSPNDSNIWHHRLG 651
Q ++A S ++ ++WH RLG
Sbjct: 374 QLNEIQTTTGTLNSSLSKSSSPLSSSSAVVSSHEFDLWHCRLG 416
Score = 51.6 bits (122), Expect(2) = 8e-14
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 236 SWILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVLIQPLFYT 400
SWI+DT ATDH+ CS+ F++ N+ V LP +R +AT++GT+ L + L T
Sbjct: 263 SWIIDTGATDHMVCSISHFSTIKASINATVKLPTGERTTATYVGTVKLSKFLTLT 317
>ref|XP_012453130.1| PREDICTED: uncharacterized protein LOC105775144 [Gossypium
raimondii]
Length = 513
Score = 52.0 bits (123), Expect(2) = 2e-13
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +1
Query: 388 LILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGLLYL 567
L L NVL +P F FNL+S++KLT + + +F IQAL S IG +V +G LYL
Sbjct: 439 LYLTNVLYIPEFAFNLLSITKLTSTLSCSFVFHKSSCEIQALPSMKMIGTARVMSG-LYL 497
Query: 568 QDTP 579
D P
Sbjct: 498 LDCP 501
Score = 50.4 bits (119), Expect(2) = 2e-13
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVLIQPLFYT 400
WI+DT ATDHI +L F S+T + Y+ LPN +V+A GT++ L+ T
Sbjct: 389 WIVDTSATDHITHTLTSFASYTKIKPIYITLPNGTKVTARFSGTVIFSAHLYLT 442
>ref|XP_007024187.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao] gi|508779553|gb|EOY26809.1| Cysteine-rich RLK
(RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 1255
Score = 51.2 bits (121), Expect(2) = 4e-13
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVL 379
WI+D+ ATDHI SL F S T++N YV LPN+++ + +HIG + L
Sbjct: 301 WIVDSGATDHICYSLDSFESTKTVNNCYVELPNDRKATVSHIGIVKL 347
Score = 50.4 bits (119), Expect(2) = 4e-13
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +1
Query: 388 LILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGLLYL 567
L L NVL VPSFKFNL+ V KLT +K ++F+ ++Q + S+ IG+ + GL +
Sbjct: 351 LTLKNVLHVPSFKFNLLFVGKLTQNKKTYVLFTDMHCIVQDVISQTVIGVARAYTGLYLM 410
Query: 568 QD 573
Q+
Sbjct: 411 QE 412
>gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus vulgaris]
Length = 1009
Score = 57.0 bits (136), Expect(2) = 6e-13
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGL 558
N L +VL VP FNL+S SKL+++ + +LIFSS +IQ +++ IG+ V GL
Sbjct: 669 NHKFYLIDVLYVPQLSFNLVSTSKLSLNMNCSLIFSSNNCMIQDNTTKERIGIVSVKAGL 728
Query: 559 LYLQDT----PPRHPHRAAATTSPNDSNIWHHRLG 651
+ + H + + D N+WH+R+G
Sbjct: 729 YAFESSFFRNTATHTIAHSFNCTVKDINLWHYRMG 763
Score = 43.9 bits (102), Expect(2) = 6e-13
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIV 376
WILD+ ATDH+ SL FTS+ ++ + LPN V A + GT++
Sbjct: 622 WILDSGATDHVCSSLSEFTSYKSIKPISISLPNGHHVFAKYSGTVI 667
>ref|XP_012849842.1| PREDICTED: uncharacterized protein LOC105969618 [Erythranthe
guttatus]
Length = 650
Score = 54.7 bits (130), Expect(2) = 9e-13
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +1
Query: 391 ILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGLLYL 567
IL NV +PSFKFNL+S+S+ T S + +IFSS + Q S++ TIG NGL YL
Sbjct: 390 ILTNVFYIPSFKFNLLSISQFTKSTNCDIIFSSSGCVFQDQSTKKTIGRGNPHNGLFYL 448
Score = 45.8 bits (107), Expect(2) = 9e-13
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTL-SNSYVLLPNEKRVSATHIGTI 373
WI+D+ A++HI SL FF+S++ + N YV LP+ THIGT+
Sbjct: 338 WIIDSGASNHICTSLSFFSSYSPIRKNIYVQLPDGSHAPVTHIGTV 383
>gb|KHN30942.1| Histone deacetylase 6 [Glycine soja]
Length = 818
Score = 58.9 bits (141), Expect(2) = 2e-12
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +1
Query: 388 LILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGLLYL 567
+ LHNVL +P+F FNLIS+SKL S + LIFSS ++Q +++ M IG+ + +GL +L
Sbjct: 756 ITLHNVLYIPTFTFNLISISKLVSSINCELIFSSTSCVLQEMNNHMKIGIVEAKHGLYHL 815
Score = 40.4 bits (93), Expect(2) = 2e-12
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 236 SWILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVL 379
SWILD+ ATDH+ SL S ++ V L N + V ATH GT+ L
Sbjct: 705 SWILDSGATDHVTYSLHNLHSHRRINPIIVKLSNGQYVHATHSGTVQL 752
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 60.5 bits (145), Expect(2) = 3e-12
Identities = 34/91 (37%), Positives = 46/91 (50%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGL 558
N +IL NVL +P F+ NLIS+S LT +IF C IQ L+ +T+G K L
Sbjct: 489 NKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNL 548
Query: 559 LYLQDTPPRHPHRAAATTSPNDSNIWHHRLG 651
L P A + + D ++WH RLG
Sbjct: 549 YVLDTQSP-----AISVNAVVDVSVWHKRLG 574
Score = 38.1 bits (87), Expect(2) = 3e-12
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 233 DSWILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVL 379
D+W++D+ AT H+ K F + T S+V LP V + +GT+++
Sbjct: 440 DTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLI 488
>ref|XP_009142130.1| PREDICTED: uncharacterized protein LOC103866013 [Brassica rapa]
Length = 1076
Score = 54.3 bits (129), Expect(2) = 4e-12
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDLALIFSS-KCYLI-------QALSSRMTIG 534
+S L L +VL +P+FKF+L+S+S LT + ++A++FSS CY+ Q L IG
Sbjct: 489 SSKLTLFDVLYIPTFKFHLLSISALTRNSNMAVLFSSDSCYIFPENPFQNQELIQDFMIG 548
Query: 535 LTKVTNGLLYLQDTPPRHPHRAAATTSP--------NDSNIWHHRLG 651
+ L L + HP R ++++P S +WH RLG
Sbjct: 549 KGNLQRNLYVLDAS---HPSRNVSSSTPITALSVLSISSEVWHQRLG 592
Score = 43.9 bits (102), Expect(2) = 4e-12
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +2
Query: 236 SWILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVLIQPL 391
+WI+DT A+ H+ L F + T+S+++V+LP+ R+ T GTI++ L
Sbjct: 441 AWIIDTGASCHVCADLALFQNTKTISDTFVILPDGSRIPVTVSGTIIVSSKL 492
>ref|XP_006587971.1| PREDICTED: uncharacterized protein LOC102669567 [Glycine max]
Length = 453
Score = 48.5 bits (114), Expect(2) = 2e-11
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVLIQPLF 394
WILD+ T HI CS + F SF +L S+VLLPN +V IG I L +F
Sbjct: 283 WILDSGETSHICCSKEQFNSFKSLHVSHVLLPNSTKVKVEGIGRIKLNDDIF 334
Score = 47.8 bits (112), Expect(2) = 2e-11
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGL 558
N + LHN+L +P+F+FNL+S+ L I +++Q L + I + GL
Sbjct: 330 NDDIFLHNMLFIPTFRFNLLSLVSLINDNSFQFIMQPNSFVLQDLKTLRRIDTARQHQGL 389
Query: 559 LYLQDTPPRHPHRAAATTSPN--DSNIWHHRLG 651
L P+ P + S N WH RLG
Sbjct: 390 LLFNF--PKSPFHDTSIQSCNVVTYETWHQRLG 420
>ref|XP_007023091.1| Uncharacterized protein TCM_027093 [Theobroma cacao]
gi|508778457|gb|EOY25713.1| Uncharacterized protein
TCM_027093 [Theobroma cacao]
Length = 994
Score = 48.5 bits (114), Expect(2) = 2e-11
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +1
Query: 382 SALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGLL 561
S L L NV VPSF+FNL+SV +LT +K+ +++F K ++Q S IG+ + GL
Sbjct: 221 SLLTLKNVFCVPSFRFNLVSVGQLTRTKNTSVLFIDKYCVVQDTHSWTVIGVARTFLGLY 280
Query: 562 YLQ 570
++
Sbjct: 281 AME 283
Score = 47.4 bits (111), Expect(2) = 2e-11
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +2
Query: 242 ILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVL 379
I+D+ A+DHI SL F S ++NS+V LPN KR TH+G + L
Sbjct: 174 IMDSGASDHIAYSLNKFISARPVTNSFVQLPNNKRAIVTHVGVVKL 219
>ref|XP_010647451.1| PREDICTED: uncharacterized protein LOC104878577 [Vitis vinifera]
Length = 359
Score = 53.1 bits (126), Expect(2) = 2e-11
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGL 558
+S L L +VL VPSF NLIS SKL ++ +IF ++Q L S IG K GL
Sbjct: 244 DSQLTLKDVLCVPSFNLNLISASKLAKDQNCCIIFFPDYCILQDLVSGKMIGSGKQCGGL 303
Query: 559 LYLQDTPPRHP--HRAAATTSPNDSNIWHHRLG 651
Y+ HP +++ S++WH RLG
Sbjct: 304 YYM------HPSTNKSVVFHVSQPSDLWHLRLG 330
Score = 42.7 bits (99), Expect(2) = 2e-11
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2
Query: 236 SWILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIV 376
SWILDT ATDHI + FT + + V LPN TH GT++
Sbjct: 196 SWILDTGATDHIVSHMSLFTDLKPSNVTTVNLPNGAASPITHTGTVI 242
>ref|XP_009109940.1| PREDICTED: uncharacterized protein LOC103835509 [Brassica rapa]
Length = 944
Score = 56.6 bits (135), Expect(2) = 4e-11
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDL-ALIFSSKCYLIQALSSRMTIGLTKVTNG 555
+ +LIL++VL VPSF FNL+SVS L S A F + CY IQ S +TIG + +
Sbjct: 504 SDSLILYDVLHVPSFFFNLVSVSALLRSSQCSAHFFPTSCY-IQEFSQGLTIGKGSLKHN 562
Query: 556 LLYLQDTPPRHPHRAAATTSPNDSNIWHHRLG 651
LY+ D P+ A + D +WH RLG
Sbjct: 563 -LYILDLIPQDISAAFTGSLSADGMLWHQRLG 593
Score = 38.1 bits (87), Expect(2) = 4e-11
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 230 YDSWILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVLIQPL 391
+ SWI+D+ AT H+ F S+ V LPN R+ H GT+ L L
Sbjct: 454 HGSWIVDSGATSHVCSDRAMFKEVFPASDLTVSLPNGTRIPILHTGTVALSDSL 507
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 55.5 bits (132), Expect(2) = 5e-11
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGL 558
+S++ L +VL +P+F +NL+SVS LT ++ F ++IQ L+ + IG K + L
Sbjct: 487 SSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNL 546
Query: 559 -----LYLQDTPPRHPHRAAATTSPNDSNIWHHRLG 651
L+ T P + T S ++WHHRLG
Sbjct: 547 YILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLG 582
Score = 38.9 bits (89), Expect(2) = 5e-11
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVL 379
WILDT A+ H+ C+L F+ + V LPN + T GT++L
Sbjct: 440 WILDTGASTHVCCNLGLFSEVHDIPVVSVSLPNGSSLKVTQAGTVLL 486
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 55.5 bits (132), Expect(2) = 5e-11
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGL 558
+S++ L +VL +P+F +NL+SVS LT ++ F ++IQ L+ + IG K + L
Sbjct: 456 SSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNL 515
Query: 559 -----LYLQDTPPRHPHRAAATTSPNDSNIWHHRLG 651
L+ T P + T S ++WHHRLG
Sbjct: 516 YILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLG 551
Score = 38.9 bits (89), Expect(2) = 5e-11
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVL 379
WILDT A+ H+ C+L F+ + V LPN + T GT++L
Sbjct: 409 WILDTGASTHVCCNLGLFSEVHDIPVVSVSLPNGSSLKVTQAGTVLL 455
>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Tarenaya hassleriana]
Length = 1238
Score = 55.5 bits (132), Expect(2) = 5e-11
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGL 558
+S++ L +VL +P+F +NL+SVS LT ++ F ++IQ L+ + IG K + L
Sbjct: 487 SSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNL 546
Query: 559 -----LYLQDTPPRHPHRAAATTSPNDSNIWHHRLG 651
L+ T P + T S ++WHHRLG
Sbjct: 547 YILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLG 582
Score = 38.9 bits (89), Expect(2) = 5e-11
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVL 379
WILDT A+ H+ C+L F+ + V LPN + T GT++L
Sbjct: 440 WILDTGASTHVCCNLGLFSEVHDIPVVSVSLPNGSSLKVTQAGTVLL 486
>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X4 [Tarenaya hassleriana]
Length = 940
Score = 55.5 bits (132), Expect(2) = 6e-11
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = +1
Query: 379 NSALILHNVLLVPSFKFNLISVSKLTISKDLALIFSSKCYLIQALSSRMTIGLTKVTNGL 558
+S++ L +VL +P+F +NL+SVS LT ++ F ++IQ L+ + IG K + L
Sbjct: 152 SSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNL 211
Query: 559 -----LYLQDTPPRHPHRAAATTSPNDSNIWHHRLG 651
L+ T P + T S ++WHHRLG
Sbjct: 212 YILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLG 247
Score = 38.9 bits (89), Expect(2) = 6e-11
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 239 WILDTEATDHIGCSLKFFTSFTTLSNSYVLLPNEKRVSATHIGTIVL 379
WILDT A+ H+ C+L F+ + V LPN + T GT++L
Sbjct: 105 WILDTGASTHVCCNLGLFSEVHDIPVVSVSLPNGSSLKVTQAGTVLL 151