BLASTX nr result

ID: Forsythia22_contig00051632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00051632
         (253 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    84   3e-14
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    81   2e-13
gb|KJB09790.1| hypothetical protein B456_001G166300 [Gossypium r...    78   2e-12
ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S...    73   3e-11

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 41/45 (91%), Positives = 41/45 (91%), Gaps = 2/45 (4%)
 Frame = +1

Query: 124 LDSRIFCFSGGGEQWCLRCGRCPPVGP--LPARKNRSLASRTSGG 252
           LDSRIFCFSGGGEQ  LRCGRCPPVGP  LPARKNRSLASRTSGG
Sbjct: 52  LDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARKNRSLASRTSGG 96


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|657370789|gb|KEH16850.1| NADH-quinone oxidoreductase
           protein [Medicago truncatula]
          Length = 556

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 39/44 (88%), Positives = 40/44 (90%), Gaps = 2/44 (4%)
 Frame = -3

Query: 251 PPLVRLASERFFRA--GRGPTGGHLPQRKHHCSPPPEKQKIRES 126
           PPLVRLASERFFRA  G GPTGGHLPQRK HCSPPP+KQKIRES
Sbjct: 274 PPLVRLASERFFRARSGPGPTGGHLPQRKLHCSPPPDKQKIRES 317


>gb|KJB09790.1| hypothetical protein B456_001G166300 [Gossypium raimondii]
          Length = 571

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 45/65 (69%), Positives = 47/65 (72%)
 Frame = -2

Query: 252 APTSPAG**AVLSGGKGPYGRASTATQAPLFATTREAKDSRVQAENTCIDSGLMPRPTTE 73
           APTSPAG          PYGRAS ATQA LFATTR+AKDSRVQAENTCIDSGLM    T 
Sbjct: 292 APTSPAG----------PYGRASPATQAALFATTRKAKDSRVQAENTCIDSGLM----TR 337

Query: 72  ARDGA 58
           A DG+
Sbjct: 338 ADDGS 342


>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
           gi|241931727|gb|EES04872.1| hypothetical protein
           SORBIDRAFT_04g009491, partial [Sorghum bicolor]
          Length = 289

 Score = 73.2 bits (178), Expect(2) = 3e-11
 Identities = 33/40 (82%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
 Frame = +1

Query: 106 YACIFSLDSRIFCFSGGGEQWCLRCGRCPPVGP--LPARK 219
           YAC+F LDSRIFCFSGGGEQ  LRCGRCPPVGP  LPAR+
Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARR 278



 Score = 21.2 bits (43), Expect(2) = 3e-11
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 87  LALDHYLCMY 116
           L+LDHY C++
Sbjct: 234 LSLDHYACLF 243


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