BLASTX nr result

ID: Forsythia22_contig00047432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00047432
         (498 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090863.1| PREDICTED: classical arabinogalactan protein...    57   6e-06

>ref|XP_011090863.1| PREDICTED: classical arabinogalactan protein 26-like [Sesamum
           indicum]
          Length = 137

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 46/129 (35%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
 Frame = +1

Query: 130 MASFYFIVAIIMALVASSLQSLPSDQPISEFSSISSAPAL------QXXXXXXXXXXXXX 291
           MA F   +A    +V     SLPS Q   E   I++APAL                    
Sbjct: 1   MAYFSNFLAAAAIIVIFLALSLPSHQLSLETPDIAAAPALLPNPPLSPYTQLSPDIAPLL 60

Query: 292 XXXXXXXXXXXXXXXXXIPSDSTQNPDMTGPVGPDTAVAPSGLLQASSTESRFLVRELKL 471
                            IPS  + NPD    +GPDTAVAPSG LQ SS  S+ LV  LKL
Sbjct: 61  PSPGGTARSPAESSMPTIPSTRSPNPDTITSIGPDTAVAPSGSLQDSSAVSQVLVEGLKL 120

Query: 472 GTSVGFLAY 498
               G LAY
Sbjct: 121 DVLYGCLAY 129


Top