BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00047400
         (357 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010097937.1| Retrovirus-related Pol polyprotein from tran...    42   8e-08
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    40   3e-06
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]      40   9e-06

>ref|XP_010097937.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis] gi|587884397|gb|EXB73293.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Morus notabilis]
          Length = 1822

 Score = 41.6 bits (96), Expect(2) = 8e-08
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = -1

Query: 333 KRMNRTLIERVRCML*IA*LLKPFWGEM 250
           +RMNRTL+ERVRCML  A L K FWGE+
Sbjct: 52  ERMNRTLLERVRCMLIEASLPKRFWGEV 79



 Score = 41.2 bits (95), Expect(2) = 8e-08
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = -3

Query: 202 PQILSNLRVFGGITCAHLKQGKFEARAKKCIFLG 101
           P    NL+VFG    AH K+GK + RAKKC+F+G
Sbjct: 108 PLNFENLKVFGCTAYAHQKEGKLDPRAKKCMFVG 141


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 40.0 bits (92), Expect(3) = 3e-06
 Identities = 20/34 (58%), Positives = 22/34 (64%)
 Frame = -3

Query: 202 PQILSNLRVFGGITCAHLKQGKFEARAKKCIFLG 101
           P   S+LRVFG I  AH+   K E RA KCIFLG
Sbjct: 614 PANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLG 647



 Score = 35.4 bits (80), Expect(3) = 3e-06
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = -1

Query: 333 KRMNRTLIERVRCML*IA*LLKPFWGEMYS 244
           +RMNRT+I + RCML  A L K FW E  S
Sbjct: 558 ERMNRTIISKARCMLSNAGLPKQFWAEAVS 587



 Score = 20.8 bits (42), Expect(3) = 3e-06
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 107 LGYPQGATLDKLW 69
           LGYP G    KLW
Sbjct: 646 LGYPSGVKGYKLW 658


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score = 40.4 bits (93), Expect(2) = 9e-06
 Identities = 20/34 (58%), Positives = 22/34 (64%)
 Frame = -3

Query: 202 PQILSNLRVFGGITCAHLKQGKFEARAKKCIFLG 101
           P   S+LRVFG    AH+  GK E RA KCIFLG
Sbjct: 625 PTNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLG 658



 Score = 35.4 bits (80), Expect(2) = 9e-06
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = -1

Query: 333 KRMNRTLIERVRCML*IA*LLKPFWGEMYS 244
           +RMNRT+I + RCML  A L K FW E  S
Sbjct: 569 ERMNRTIISKARCMLSNAGLPKQFWAEAVS 598