BLASTX nr result

ID: Forsythia22_contig00047271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00047271
         (542 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008232623.1| PREDICTED: putative ribonuclease H protein A...    57   6e-06
ref|XP_008222000.1| PREDICTED: putative ribonuclease H protein A...    57   6e-06
ref|XP_008237273.1| PREDICTED: uncharacterized protein LOC103336...    56   8e-06

>ref|XP_008232623.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
            gi|645266610|ref|XP_008238689.1| PREDICTED: putative
            ribonuclease H protein At1g65750 [Prunus mume]
          Length = 965

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
 Frame = +3

Query: 9    GTLAVIQNHLGSIMEAESRRAVGNYSVEDTEASVLRDGLILAKECGLLIEAFECDSLRTV 188
            G  A++++  G+++ A + RA    SV  TE   L+ G+  A +  LL    E DSL+ V
Sbjct: 825  GAGAIVRDSHGNLVGALAMRAPSRISVLATELYALKVGISFALDVSLLPLEIESDSLQAV 884

Query: 189  Q--NPHSDYSYAHNASILDIITLLNDGSSGSIHFVPRDGNKLSHKLA*FDYSDMGLVRWF 362
               N   +   A    +  +  LL   +S ++  VPR  NK +H++A F   D  L  W 
Sbjct: 885  SMVNSEEECLAAEGGLVDGVRRLLVRSASTAVRHVPRQANKAAHRIARFSLRDQSLSIWL 944

Query: 363  HCTPFFISSTV 395
               P ++   V
Sbjct: 945  DVGPLWLMDAV 955


>ref|XP_008222000.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 561

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
 Frame = +3

Query: 9   GTLAVIQNHLGSIMEAESRRAVGNYSVEDTEASVLRDGLILAKECGLLIEAFECDSLRTV 188
           G  A++++  G+++ A + RA    SV  TE   L+ G+  A +  LL    E DSL+ V
Sbjct: 421 GAGAIVRDSHGNLVGALAMRAPSRISVLATELYALKVGISFALDVSLLPLEIESDSLQAV 480

Query: 189 Q--NPHSDYSYAHNASILDIITLLNDGSSGSIHFVPRDGNKLSHKLA*FDYSDMGLVRWF 362
              N   +   A    +  +  LL   +S ++  VPR  NK +H++A F   D  L  W 
Sbjct: 481 SMVNSEEECLAAEGGLVDGVRRLLVRSASTAVRHVPRQANKAAHRIARFSLRDQSLSIWL 540

Query: 363 HCTPFFISSTV 395
              P ++   V
Sbjct: 541 DVGPLWLMDAV 551


>ref|XP_008237273.1| PREDICTED: uncharacterized protein LOC103336015 [Prunus mume]
          Length = 1765

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
 Frame = +3

Query: 9    GTLAVIQNHLGSIMEAESRRAVGNYSVEDTEASVLRDGLILAKECGLLIEAFECDSLRTV 188
            G  A++++  G+++ A + RA    SV  TE   L+ G+  A +  LL    E DSL+ V
Sbjct: 1625 GAGAIVRDSHGNLVGALAMRAPSRISVLATELYALKVGISFALDVSLLPLEIEYDSLQAV 1684

Query: 189  Q--NPHSDYSYAHNASILDIITLLNDGSSGSIHFVPRDGNKLSHKLA*FDYSDMGLVRWF 362
               N   +   A    +  +  LL   +S ++  VPR  NK +H++A F   D  L  W 
Sbjct: 1685 SMVNSEEECLAAEGGLVDGVRRLLVRSASTAVRHVPRQANKAAHRIARFSLRDQSLSIWL 1744

Query: 363  HCTPFFISSTV 395
               P ++   V
Sbjct: 1745 DVGPLWLMDAV 1755


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