BLASTX nr result
ID: Forsythia22_contig00045202
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00045202
(319 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 100 1e-25
emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera] 96 9e-24
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 95 1e-23
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera] 102 2e-23
emb|CAN73795.1| hypothetical protein VITISV_036649 [Vitis vinifera] 100 3e-23
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 95 6e-23
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 93 6e-23
ref|XP_010647148.1| PREDICTED: uncharacterized protein LOC104878... 91 1e-22
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 96 2e-22
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 94 2e-22
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 96 2e-22
emb|CAN61537.1| hypothetical protein VITISV_012372 [Vitis vinifera] 96 2e-22
gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-... 94 2e-22
emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera] 90 2e-22
ref|XP_010227141.1| PREDICTED: uncharacterized protein LOC104581... 93 4e-22
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 92 5e-22
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 91 6e-22
gb|EMT21953.1| ABC transporter C family member 10 [Aegilops taus... 94 8e-22
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 93 1e-21
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 92 1e-21
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 99.8 bits (247), Expect(2) = 1e-25
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++TWIQSLL+EL+I P +WCDN A ALA NPVYHA+TKH+ELD+HF+RDKV KQ
Sbjct: 735 EVTWIQSLLKELHIHLVTAPIMWCDNQSAIALAHNPVYHAKTKHVELDIHFIRDKVTAKQ 794
Query: 35 LVISYVPTTDQ 3
+ + ++P+ DQ
Sbjct: 795 ITVQFIPSEDQ 805
Score = 43.1 bits (100), Expect(2) = 1e-25
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WSSKKQ VV+RSSTEAEYR LA TA+
Sbjct: 709 WSSKKQAVVSRSSTEAEYRALAQATAE 735
>emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera]
Length = 328
Score = 96.3 bits (238), Expect(2) = 9e-24
Identities = 39/71 (54%), Positives = 58/71 (81%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ W++S+ EL I+ P IWCDN GA ALA+NPV+H+RTKHIE+D+H+V+++VL K+
Sbjct: 190 EVAWLRSIFSELGISLVNTPVIWCDNQGAGALAANPVFHSRTKHIEVDVHYVQEQVLDKK 249
Query: 35 LVISYVPTTDQ 3
LV+SYVP+ +Q
Sbjct: 250 LVVSYVPSVEQ 260
Score = 40.4 bits (93), Expect(2) = 9e-24
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WSS+KQ +VARSSTE EYR LAH + +
Sbjct: 164 WSSRKQSMVARSSTEVEYRALAHASTE 190
>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
Length = 1002
Score = 95.1 bits (235), Expect(2) = 1e-23
Identities = 40/71 (56%), Positives = 57/71 (80%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ W++SL EL I+ P IWCDN GA ALA+NPV+H+RTKHIE+D+ +VR++VL K+
Sbjct: 902 EVAWLRSLFSELGISLVNTPVIWCDNQGAGALAANPVFHSRTKHIEVDVXYVREQVLDKK 961
Query: 35 LVISYVPTTDQ 3
LV+SYVP+ +Q
Sbjct: 962 LVVSYVPSVEQ 972
Score = 41.2 bits (95), Expect(2) = 1e-23
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAH 224
WSS+KQ VVARSST+AEYR LAH
Sbjct: 876 WSSRKQPVVARSSTKAEYRALAH 898
>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
Length = 1074
Score = 102 bits (255), Expect(2) = 2e-23
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
+++W+Q LL+EL I Q + P IWCDN+ A+ALA+N V+HAR+KHIE+D HFVRDKVL K+
Sbjct: 957 EVSWVQFLLKELCIPQQDTPLIWCDNISATALAANSVFHARSKHIEIDFHFVRDKVLHKE 1016
Query: 35 LVISYVPTTDQ 3
L+I YVP+TDQ
Sbjct: 1017 LLIQYVPSTDQ 1027
Score = 32.7 bits (73), Expect(2) = 2e-23
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WSS KQ VV+RSS E+EY LA + A+
Sbjct: 931 WSSTKQRVVSRSSAESEYWALALLVAE 957
>emb|CAN73795.1| hypothetical protein VITISV_036649 [Vitis vinifera]
Length = 828
Score = 100 bits (248), Expect(2) = 3e-23
Identities = 43/71 (60%), Positives = 59/71 (83%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
+++W+Q LL+EL I Q P IWCDN+ +ALA+N V+HAR+KH+E+D+HFVRDKVL K+
Sbjct: 711 EVSWVQFLLKELCIPQPNNPLIWCDNISVAALAANSVFHARSKHLEIDLHFVRDKVLRKE 770
Query: 35 LVISYVPTTDQ 3
L+I YVP+TDQ
Sbjct: 771 LLIQYVPSTDQ 781
Score = 35.0 bits (79), Expect(2) = 3e-23
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WSS KQ VV+RSS ++EYR LA + A+
Sbjct: 685 WSSTKQCVVSRSSAKSEYRALAFLAAE 711
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 95.1 bits (235), Expect(2) = 6e-23
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ W+QSLL EL I T IP +WCDNLGA+ L+S P+++ARTKHIE+D HFVRD+VL+K+
Sbjct: 1337 EVIWLQSLLHELGIRLTGIPRLWCDNLGATYLSSKPIFNARTKHIEVDFHFVRDRVLSKK 1396
Query: 35 LVISYVPTTDQ 3
L I + T DQ
Sbjct: 1397 LDIRLISTNDQ 1407
Score = 38.9 bits (89), Expect(2) = 6e-23
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
W+SKKQ V+RSSTEAEY+ +A+ TA+
Sbjct: 1311 WNSKKQSTVSRSSTEAEYKAMANATAE 1337
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 92.8 bits (229), Expect(2) = 6e-23
Identities = 38/71 (53%), Positives = 57/71 (80%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ W+QSLL EL T +P IWCDN+ +L++NPV H+RTKH+ELD++FVR+KV+ ++
Sbjct: 1160 EMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERK 1219
Query: 35 LVISYVPTTDQ 3
LV+++VPT DQ
Sbjct: 1220 LVVNHVPTEDQ 1230
Score = 41.2 bits (95), Expect(2) = 6e-23
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAKSL 206
WSSKKQ +RSSTEAEYR+LA +T++ L
Sbjct: 1134 WSSKKQHTTSRSSTEAEYRSLASLTSEML 1162
>ref|XP_010647148.1| PREDICTED: uncharacterized protein LOC104878438 [Vitis vinifera]
Length = 910
Score = 90.9 bits (224), Expect(2) = 1e-22
Identities = 37/71 (52%), Positives = 56/71 (78%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ W+QSLL EL T +P IWCDN+ +L++NPV H+RTKH+ELD++FVR+KV+ ++
Sbjct: 808 ELLWLQSLLSELKSKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERK 867
Query: 35 LVISYVPTTDQ 3
LV+++VP DQ
Sbjct: 868 LVVNHVPAEDQ 878
Score = 42.0 bits (97), Expect(2) = 1e-22
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAKSL 206
WSSKKQ ++RSSTEAEYR+LA +T++ L
Sbjct: 782 WSSKKQHTISRSSTEAEYRSLASLTSELL 810
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 95.5 bits (236), Expect(2) = 2e-22
Identities = 41/71 (57%), Positives = 57/71 (80%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ WIQ +LQEL ++ + P +WCDN A+ LA+NPV+HARTKHIE+D+HF+RD VL KQ
Sbjct: 1264 EMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFHARTKHIEMDLHFIRDHVLRKQ 1323
Query: 35 LVISYVPTTDQ 3
LVI Y+P+ +Q
Sbjct: 1324 LVIQYLPSAEQ 1334
Score = 37.0 bits (84), Expect(2) = 2e-22
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAKSL 206
WSS KQ VV+RSS E+EYR LA T++ +
Sbjct: 1238 WSSNKQKVVSRSSAESEYRALASATSEMI 1266
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 94.0 bits (232), Expect(2) = 2e-22
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
+I W+Q+LLQELNI + +WCDN+GA L+ NPV+HARTKHIE+D HFVR++V K
Sbjct: 1335 EIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKL 1394
Query: 35 LVISYVPTTDQ 3
L + YV T DQ
Sbjct: 1395 LQVDYVSTNDQ 1405
Score = 38.5 bits (88), Expect(2) = 2e-22
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
W++KKQ V+RSSTEAEY+ LA+ TA+
Sbjct: 1309 WNAKKQATVSRSSTEAEYKALANATAE 1335
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 95.5 bits (236), Expect(2) = 2e-22
Identities = 41/71 (57%), Positives = 57/71 (80%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ WIQ +LQEL ++ + P +WCDN A+ LA+NPV+HARTKHIE+D+HF+RD VL KQ
Sbjct: 1122 EMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFHARTKHIEMDLHFIRDHVLRKQ 1181
Query: 35 LVISYVPTTDQ 3
LVI Y+P+ +Q
Sbjct: 1182 LVIQYLPSAEQ 1192
Score = 37.0 bits (84), Expect(2) = 2e-22
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAKSL 206
WSS KQ VV+RSS E+EYR LA T++ +
Sbjct: 1096 WSSNKQKVVSRSSAESEYRALASATSEMI 1124
>emb|CAN61537.1| hypothetical protein VITISV_012372 [Vitis vinifera]
Length = 742
Score = 96.3 bits (238), Expect(2) = 2e-22
Identities = 40/71 (56%), Positives = 58/71 (81%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
+ITW+Q+LL+EL I+QT +P +WCDN +ALA+NP HAR+KH+ELD+HF+RDKVL ++
Sbjct: 541 EITWVQALLKELCISQTTVPLLWCDNQSVAALAANPXSHARSKHVELDLHFIRDKVLRQE 600
Query: 35 LVISYVPTTDQ 3
+ I Y+ +T Q
Sbjct: 601 IQIQYIXSTXQ 611
Score = 36.2 bits (82), Expect(2) = 2e-22
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WSS KQ VV+RSS E+EY+ L ITA+
Sbjct: 515 WSSTKQKVVSRSSAESEYQALVSITAE 541
>gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-class, partial
[Oryza sativa Japonica Group]
Length = 352
Score = 94.0 bits (232), Expect(2) = 2e-22
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
+I W+Q+LLQELNI + +WCDN+GA L+ NPV+HARTKHIE+D HFVR++V K
Sbjct: 250 EIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKL 309
Query: 35 LVISYVPTTDQ 3
L + YV T DQ
Sbjct: 310 LQVDYVSTNDQ 320
Score = 38.5 bits (88), Expect(2) = 2e-22
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
W++KKQ V+RSSTEAEY+ LA+ TA+
Sbjct: 224 WNAKKQATVSRSSTEAEYKALANATAE 250
>emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]
Length = 735
Score = 90.1 bits (222), Expect(2) = 2e-22
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ W+ SL EL I+ IWCDN G ALA+NPV+H+RTKHIE+D+H+VR++VL ++
Sbjct: 635 EVAWLCSLFSELGISLVNTLVIWCDNQGVGALAANPVFHSRTKHIEVDVHYVREQVLDQK 694
Query: 35 LVISYVPTTDQ 3
LV+SYVP+ +Q
Sbjct: 695 LVVSYVPSVEQ 705
Score = 42.0 bits (97), Expect(2) = 2e-22
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WSS+KQ VVARSSTEAEYR L+H + +
Sbjct: 609 WSSRKQSVVARSSTEAEYRALSHASTE 635
>ref|XP_010227141.1| PREDICTED: uncharacterized protein LOC104581367 [Brachypodium
distachyon]
Length = 957
Score = 92.8 bits (229), Expect(2) = 4e-22
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ W QSLL EL + Q P +WCDNLGA+ L++NPV+HARTKHIE+D HFVR++V K
Sbjct: 875 ELIWFQSLLGELGVRQERAPVLWCDNLGATYLSANPVFHARTKHIEVDYHFVRERVARKA 934
Query: 35 LVISYVPTTDQ 3
L I +V T DQ
Sbjct: 935 LEIRFVSTNDQ 945
Score = 38.5 bits (88), Expect(2) = 4e-22
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAKSLGF 200
W ++KQ V+RSSTEAEY+ LA+ TA+ + F
Sbjct: 849 WGARKQATVSRSSTEAEYKALANATAELIWF 879
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 92.4 bits (228), Expect(2) = 5e-22
Identities = 39/71 (54%), Positives = 53/71 (74%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
+I W+Q+LLQEL + +WCDNLGA L++NP++HARTKHIE+D HFVR++V K
Sbjct: 719 EIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKL 778
Query: 35 LVISYVPTTDQ 3
L I+Y+ T DQ
Sbjct: 779 LEIAYISTKDQ 789
Score = 38.5 bits (88), Expect(2) = 5e-22
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WS++KQ V+RSSTEAEY+ LA+ TA+
Sbjct: 693 WSARKQATVSRSSTEAEYKALANATAE 719
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 90.5 bits (223), Expect(2) = 6e-22
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
+I WIQ+LL EL I +I +WCDN+GA + +NPV+HARTKHIE+D HFVR++V K
Sbjct: 1334 EIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKF 1393
Query: 35 LVISYVPTTDQ 3
L + Y+ T DQ
Sbjct: 1394 LQVEYISTKDQ 1404
Score = 40.0 bits (92), Expect(2) = 6e-22
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WS++KQ V+RSSTEAEY+ LA++TA+
Sbjct: 1308 WSARKQATVSRSSTEAEYKALANVTAE 1334
>gb|EMT21953.1| ABC transporter C family member 10 [Aegilops tauschii]
Length = 3041
Score = 93.6 bits (231), Expect(2) = 8e-22
Identities = 39/71 (54%), Positives = 57/71 (80%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
+I W+QS+L+EL + T+ P +WCDNLGA+ L++NPV+HARTKHI++D HFVR++V +Q
Sbjct: 2687 EIIWVQSMLRELGVKHTKTPCLWCDNLGATYLSANPVFHARTKHIKIDFHFVRERVARRQ 2746
Query: 35 LVISYVPTTDQ 3
L I +V + DQ
Sbjct: 2747 LDIRFVHSRDQ 2757
Score = 36.6 bits (83), Expect(2) = 8e-22
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
W KKQ V+RSSTEAEY+ LA+ TA+
Sbjct: 2661 WCVKKQATVSRSSTEAEYKALANATAE 2687
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 92.8 bits (229), Expect(2) = 1e-21
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++TW++ +L EL I + + +WCDNLGA+ L++NPV+HARTKHIE+D HFVR++V K
Sbjct: 838 EVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKL 897
Query: 35 LVISYVPTTDQ 3
L I ++ TTDQ
Sbjct: 898 LDIQFISTTDQ 908
Score = 37.0 bits (84), Expect(2) = 1e-21
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WS++KQ V+RSSTEAEY+ LA+ T +
Sbjct: 812 WSARKQATVSRSSTEAEYKALANATTE 838
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 92.0 bits (227), Expect(2) = 1e-21
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = -3
Query: 215 KITWIQSLLQELNITQTEIPGIWCDNLGASALASNPVYHARTKHIELDMHFVRDKVLTKQ 36
++ W+Q+LL+EL I E +WCDNLGA+ LA NPV+HARTKHIE+D HFVR++V KQ
Sbjct: 1978 EVMWVQALLKELGINSPETACMWCDNLGATYLAVNPVFHARTKHIEIDYHFVRERVARKQ 2037
Query: 35 LVISYVPTTDQ 3
L I ++ + DQ
Sbjct: 2038 LEIKFISSGDQ 2048
Score = 37.4 bits (85), Expect(2) = 1e-21
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = -1
Query: 292 WSSKKQ*VVARSSTEAEYRTLAHITAK 212
WS++KQ V+RSSTEAEY+ +A+ TA+
Sbjct: 1952 WSARKQATVSRSSTEAEYKAVANATAE 1978