BLASTX nr result

ID: Forsythia22_contig00043552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00043552
         (305 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010065718.1| PREDICTED: pentatricopeptide repeat-containi...    42   1e-06
ref|XP_012441679.1| PREDICTED: pentatricopeptide repeat-containi...    40   7e-06
emb|CDP17813.1| unnamed protein product [Coffea canephora]             41   7e-06
ref|XP_006577074.1| PREDICTED: pentatricopeptide repeat-containi...    42   9e-06
gb|KHN18774.1| Pentatricopeptide repeat-containing protein [Glyc...    42   9e-06

>ref|XP_010065718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Eucalyptus grandis]
           gi|629097574|gb|KCW63339.1| hypothetical protein
           EUGRSUZ_G00971 [Eucalyptus grandis]
          Length = 539

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 21/35 (60%), Positives = 24/35 (68%)
 Frame = +1

Query: 58  EENNFRLLASSEGLDPDSMTYRILVSG**RTEGRR 162
           E N  RLLA S+GL+PD M YRILVSG  R   R+
Sbjct: 466 EANKLRLLAQSKGLEPDGMMYRILVSGFTRERKRK 500



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 15/36 (41%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = +3

Query: 150 RREEGEVMLEDRIG-GFIPDITAYNLLTDGLNKTKI 254
           +R+EG++++++ +   FIPD+  YN L DGL+ +KI
Sbjct: 498 KRKEGQILVDEMLDKDFIPDLATYNRLIDGLSNSKI 533


>ref|XP_012441679.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
           [Gossypium raimondii] gi|763795143|gb|KJB62139.1|
           hypothetical protein B456_009G402600 [Gossypium
           raimondii]
          Length = 492

 Score = 40.4 bits (93), Expect(2) = 7e-06
 Identities = 21/35 (60%), Positives = 27/35 (77%)
 Frame = +1

Query: 58  EENNFRLLASSEGLDPDSMTYRILVSG**RTEGRR 162
           + N FRLLAS++GL+PD +TY ILV G  R +GRR
Sbjct: 414 DANKFRLLASAKGLEPDEVTYNILVYGYTR-DGRR 447



 Score = 35.8 bits (81), Expect(2) = 7e-06
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = +3

Query: 150 RREEGEVMLEDRIG-GFIPDITAYNLLTDGLNKT 248
           RR+EGE ++++ +  G+IPDI  YN L DGL+ +
Sbjct: 446 RRKEGENLVDEMLDKGYIPDIATYNRLMDGLSNS 479


>emb|CDP17813.1| unnamed protein product [Coffea canephora]
          Length = 479

 Score = 41.2 bits (95), Expect(2) = 7e-06
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +1

Query: 58  EENNFRLLASSEGLDPDSMTYRILVSG 138
           E N  RLLA+ +GLDPD  TYRIL+SG
Sbjct: 411 EANKLRLLAAGKGLDPDGTTYRILISG 437



 Score = 35.0 bits (79), Expect(2) = 7e-06
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 150 RREEGEVMLEDRI-GGFIPDITAYNLLTDGLNKTK 251
           + EEGE ++E+ +  G IPDI  YN L  GL+K K
Sbjct: 443 KEEEGEALVEEMLDSGLIPDIATYNKLKLGLSKRK 477


>ref|XP_006577074.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Glycine max]
          Length = 477

 Score = 41.6 bits (96), Expect(2) = 9e-06
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +1

Query: 58  EENNFRLLASSEGLDPDSMTYRILVSG 138
           E N  RLLASS+G +PD MTYRILV G
Sbjct: 399 EANRLRLLASSKGFEPDEMTYRILVMG 425



 Score = 34.3 bits (77), Expect(2) = 9e-06
 Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = +3

Query: 153 REEGEVMLEDRIG-GFIPDITAYNLLTDGLNKTK 251
           RE+GE+++++ +  GFIPD+ +YN L  GL+  +
Sbjct: 432 REQGELLVDEMLDMGFIPDLASYNQLMSGLSNCR 465


>gb|KHN18774.1| Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 336

 Score = 41.6 bits (96), Expect(2) = 9e-06
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +1

Query: 58  EENNFRLLASSEGLDPDSMTYRILVSG 138
           E N  RLLASS+G +PD MTYRILV G
Sbjct: 168 EANRLRLLASSKGFEPDEMTYRILVMG 194



 Score = 34.3 bits (77), Expect(2) = 9e-06
 Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = +3

Query: 153 REEGEVMLEDRIG-GFIPDITAYNLLTDGLNKTK 251
           RE+GE+++++ +  GFIPD+ +YN L  GL+  +
Sbjct: 201 REQGELLVDEMLDMGFIPDLASYNQLMSGLSNCR 234


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