BLASTX nr result
ID: Forsythia22_contig00042941
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00042941
(344 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 47 4e-09
emb|CAN62027.1| hypothetical protein VITISV_005441 [Vitis vinifera] 44 2e-08
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 44 1e-07
gb|AAF37861.1| reverse transcriptase-like protein [Ipomoea batatas] 47 1e-07
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] 42 2e-07
emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera] 42 2e-07
gb|AAF37865.1| reverse transcriptase-like protein [Ipomoea batatas] 47 2e-07
gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subc... 41 2e-07
ref|WP_044909203.1| hypothetical protein, partial [[Clostridium]... 37 3e-07
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 41 3e-07
ref|XP_012575627.1| PREDICTED: uncharacterized protein LOC105853... 41 4e-07
gb|AAG44309.1|AF232954_1 reverse transcriptase-like protein [Aeg... 42 4e-07
gb|AAG44304.1|AF232943_1 reverse transcriptase-like protein [Aeg... 42 4e-07
gb|AAG44305.1|AF232944_1 reverse transcriptase-like protein [Aeg... 42 4e-07
gb|AAK84849.1| reverse transcriptase [Zea mays] 41 4e-07
gb|AAG44308.1|AF232952_1 reverse transcriptase-like protein [Aeg... 42 4e-07
emb|CAN75844.1| hypothetical protein VITISV_005150 [Vitis vinifera] 45 8e-07
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 47.4 bits (111), Expect(2) = 4e-09
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2
Query: 188 KTDTVYLLKKSLYGLKQFPRQWYKSLTPIF*L*ALGDAILVS 313
K D V LK+SLYGLKQ PRQWYKS +PI+ L + D ++ +
Sbjct: 881 KEDYVCKLKRSLYGLKQSPRQWYKSGSPIYLLLYVDDMLIAA 922
Score = 39.7 bits (91), Expect(2) = 4e-09
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +3
Query: 93 ELEHFDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
ELE DVKT FL G+LEE I MDQ EG + K+
Sbjct: 849 ELEQLDVKTAFLYGELEEEIYMDQPEGFIVPGKE 882
>emb|CAN62027.1| hypothetical protein VITISV_005441 [Vitis vinifera]
Length = 90
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +3
Query: 93 ELEHFDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
E+E DVKT FL+GDLEE I M+QLEG K K+
Sbjct: 2 EIEQLDVKTAFLHGDLEEEIYMEQLEGFTIKCKE 35
Score = 40.4 bits (93), Expect(2) = 2e-08
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = +2
Query: 182 KSKTDTVYLLKKSLYGLKQFPRQWYK 259
K K V LKKSLYGLKQ PRQWYK
Sbjct: 32 KCKEHLVCRLKKSLYGLKQAPRQWYK 57
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 43.5 bits (101), Expect(2) = 1e-07
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +2
Query: 182 KSKTDTVYLLKKSLYGLKQFPRQWYKSLTPI 274
K K D V LKKSLYGLKQ PRQWYK +
Sbjct: 918 KGKEDYVCKLKKSLYGLKQAPRQWYKKFESV 948
Score = 38.5 bits (88), Expect(2) = 1e-07
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 93 ELEHFDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
E++ DVKT FL+GDL++ I M+Q EG V K K+
Sbjct: 888 EIQQMDVKTAFLHGDLDKEIYMEQPEGFVLKGKE 921
>gb|AAF37861.1| reverse transcriptase-like protein [Ipomoea batatas]
Length = 95
Score = 46.6 bits (109), Expect(2) = 1e-07
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +2
Query: 170 GDRGKSKTDTVYLLKKSLYGLKQFPRQWYKSLTPI 274
G + K K D V LKKSLYGLKQ PRQWYK T +
Sbjct: 24 GFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSV 58
Score = 35.4 bits (80), Expect(2) = 1e-07
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 105 FDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
FDVKT F +GDL+E I M+Q EG K K+
Sbjct: 2 FDVKTAFFHGDLDEEIYMEQPEGFKVKGKE 31
>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
Length = 406
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2
Query: 200 VYLLKKSLYGLKQFPRQWYK 259
VY LKKSLYGLKQ PRQWYK
Sbjct: 33 VYKLKKSLYGLKQSPRQWYK 52
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3
Query: 108 DVKTTFLNGDLEEIICMDQLEGIVE 182
DVKTTFL+GDLEE++ M QLEG ++
Sbjct: 2 DVKTTFLHGDLEELVYMVQLEGFIQ 26
>emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]
Length = 367
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2
Query: 200 VYLLKKSLYGLKQFPRQWYK 259
VY LKKSLYGLKQ PRQWYK
Sbjct: 33 VYKLKKSLYGLKQSPRQWYK 52
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3
Query: 108 DVKTTFLNGDLEEIICMDQLEGIVE 182
DVKTTFL+GDLEE++ M QLEG ++
Sbjct: 2 DVKTTFLHGDLEELVYMVQLEGFIQ 26
>gb|AAF37865.1| reverse transcriptase-like protein [Ipomoea batatas]
Length = 95
Score = 46.6 bits (109), Expect(2) = 2e-07
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +2
Query: 170 GDRGKSKTDTVYLLKKSLYGLKQFPRQWYKSLTPI 274
G + K K D V LKKSLYGLKQ PRQWYK T +
Sbjct: 24 GFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSV 58
Score = 35.0 bits (79), Expect(2) = 2e-07
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 105 FDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
FDVKT FL+GDL+E I M+ EG K K+
Sbjct: 2 FDVKTAFLHGDLDEEIYMEHPEGFKVKGKE 31
>gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1136
Score = 41.2 bits (95), Expect(2) = 2e-07
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3
Query: 93 ELEHFDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
ELE VKTTFL+G+LEE I +DQLEG + K+
Sbjct: 673 ELEQLGVKTTFLHGELEEEIYIDQLEGFIVPGKE 706
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +2
Query: 188 KTDTVYLLKKSLYGLKQFPRQWYK 259
K D V LK+SLYGLKQ PRQWYK
Sbjct: 705 KEDYVCKLKRSLYGLKQSPRQWYK 728
>ref|WP_044909203.1| hypothetical protein, partial [[Clostridium] innocuum]
Length = 75
Score = 37.4 bits (85), Expect(3) = 3e-07
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +2
Query: 182 KSKTDTVYLLKKSLYGLKQFPRQWY 256
K K V LKKSLYGLKQ PR WY
Sbjct: 27 KGKESLVCRLKKSLYGLKQSPRMWY 51
Score = 35.4 bits (80), Expect(3) = 3e-07
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 108 DVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
DVKTTFL+GDLEE I M Q E + K K+
Sbjct: 2 DVKTTFLHGDLEEEIYMSQPEHYIVKGKE 30
Score = 27.7 bits (60), Expect(3) = 3e-07
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 259 KSDSYILTLGFRRCNFGLCLYFR 327
K D+++L++GF R C+YFR
Sbjct: 53 KFDAFVLSIGFVRSKLDHCVYFR 75
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 40.8 bits (94), Expect(2) = 3e-07
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +3
Query: 93 ELEHFDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
ELE DVKT FL+G+LEE I MDQ EG + K+
Sbjct: 766 ELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKE 799
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +2
Query: 188 KTDTVYLLKKSLYGLKQFPRQWYK 259
K D V LK+SLYGLKQ PRQWYK
Sbjct: 798 KEDYVCKLKRSLYGLKQSPRQWYK 821
>ref|XP_012575627.1| PREDICTED: uncharacterized protein LOC105853109 [Cicer arietinum]
Length = 204
Score = 41.2 bits (95), Expect(2) = 4e-07
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 93 ELEHFDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
ELEH DVKTTFL+GDL E I M + +G + K+
Sbjct: 2 ELEHMDVKTTFLHGDLNETILMQRSDGFKTQGKE 35
Score = 39.3 bits (90), Expect(2) = 4e-07
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2
Query: 170 GDRGKSKTDTVYLLKKSLYGLKQFPRQWYKS 262
G + + K D V LLK S+YGLKQ PR+WY S
Sbjct: 28 GFKTQGKEDWVCLLKISIYGLKQLPRKWYLS 58
>gb|AAG44309.1|AF232954_1 reverse transcriptase-like protein [Aegiceras corniculatum]
gi|12005268|gb|AAG44361.1|AF233057_1 reverse
transcriptase-like protein [Spiranthes spiralis]
Length = 94
Score = 42.0 bits (97), Expect(2) = 4e-07
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 170 GDRGKSKTDTVYLLKKSLYGLKQFPRQWYK 259
G + K K + V LKKSLYGLKQ PRQWYK
Sbjct: 24 GFQVKGKENLVCRLKKSLYGLKQAPRQWYK 53
Score = 38.5 bits (88), Expect(2) = 4e-07
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 105 FDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
FDVKT FLNG+LEE I M+Q EG K K+
Sbjct: 2 FDVKTAFLNGELEEEIFMEQPEGFQVKGKE 31
>gb|AAG44304.1|AF232943_1 reverse transcriptase-like protein [Aegiceras corniculatum]
Length = 94
Score = 42.0 bits (97), Expect(2) = 4e-07
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 170 GDRGKSKTDTVYLLKKSLYGLKQFPRQWYK 259
G + K K + V LKKSLYGLKQ PRQWYK
Sbjct: 24 GFQVKGKENLVCRLKKSLYGLKQAPRQWYK 53
Score = 38.5 bits (88), Expect(2) = 4e-07
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 105 FDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
FDVKT FLNG+LEE I M+Q EG K K+
Sbjct: 2 FDVKTAFLNGELEEEIFMEQPEGFQVKGKE 31
>gb|AAG44305.1|AF232944_1 reverse transcriptase-like protein [Aegiceras corniculatum]
gi|12005108|gb|AAG44307.1|AF232951_1 reverse
transcriptase-like protein [Aegiceras corniculatum]
Length = 94
Score = 42.0 bits (97), Expect(2) = 4e-07
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 170 GDRGKSKTDTVYLLKKSLYGLKQFPRQWYK 259
G + K K + V LKKSLYGLKQ PRQWYK
Sbjct: 24 GFQVKGKENLVCRLKKSLYGLKQAPRQWYK 53
Score = 38.5 bits (88), Expect(2) = 4e-07
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 105 FDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
FDVKT FLNG+LEE I M+Q EG K K+
Sbjct: 2 FDVKTAFLNGELEEEIFMEQPEGFQVKGKE 31
>gb|AAK84849.1| reverse transcriptase [Zea mays]
Length = 94
Score = 41.2 bits (95), Expect(2) = 4e-07
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +2
Query: 188 KTDTVYLLKKSLYGLKQFPRQWYK 259
K D V LKKSLYGLKQ PRQWYK
Sbjct: 30 KEDYVCRLKKSLYGLKQSPRQWYK 53
Score = 39.3 bits (90), Expect(2) = 4e-07
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 105 FDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
FDVKT FL+GDLEE I MDQ EG + K+
Sbjct: 2 FDVKTAFLHGDLEEDIYMDQPEGFIVPGKE 31
>gb|AAG44308.1|AF232952_1 reverse transcriptase-like protein [Aegiceras corniculatum]
Length = 92
Score = 42.0 bits (97), Expect(2) = 4e-07
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 170 GDRGKSKTDTVYLLKKSLYGLKQFPRQWYK 259
G + K K + V LKKSLYGLKQ PRQWYK
Sbjct: 24 GFQVKGKENLVCRLKKSLYGLKQAPRQWYK 53
Score = 38.5 bits (88), Expect(2) = 4e-07
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 105 FDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
FDVKT FLNG+LEE I M+Q EG K K+
Sbjct: 2 FDVKTAFLNGELEEEIFMEQPEGFQVKGKE 31
>emb|CAN75844.1| hypothetical protein VITISV_005150 [Vitis vinifera]
Length = 875
Score = 44.7 bits (104), Expect(2) = 8e-07
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +3
Query: 75 ITHLG*ELEHFDVKTTFLNGDLEEIICMDQLEGIVEKVKQ 194
+TH EL H DVK FLNGDL+E + M+Q G VE K+
Sbjct: 571 VTHFDLELHHMDVKIAFLNGDLDEDVYMEQPTGFVEVGKE 610
Score = 34.7 bits (78), Expect(2) = 8e-07
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2
Query: 188 KTDTVYLLKKSLYGLKQFPRQWYKSLTPI 274
K D V L KS+YGLKQ RQWY+ I
Sbjct: 609 KEDLVCKLNKSIYGLKQASRQWYQKFDRI 637