BLASTX nr result
ID: Forsythia22_contig00042842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00042842
(393 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011090810.1| PREDICTED: mediator of RNA polymerase II tra... 164 2e-43
ref|XP_012858371.1| PREDICTED: mediator of RNA polymerase II tra... 153 1e-39
gb|EYU43842.1| hypothetical protein MIMGU_mgv1a0002972mg, partia... 153 1e-39
ref|XP_012481826.1| PREDICTED: mediator of RNA polymerase II tra... 145 2e-37
gb|KHG14892.1| hypothetical protein F383_10620 [Gossypium arboreum] 145 2e-37
ref|XP_002516789.1| conserved hypothetical protein [Ricinus comm... 140 2e-37
ref|XP_012069510.1| PREDICTED: mediator of RNA polymerase II tra... 140 8e-37
ref|XP_009617286.1| PREDICTED: mediator of RNA polymerase II tra... 143 8e-37
emb|CDO98984.1| unnamed protein product [Coffea canephora] 145 1e-36
ref|XP_008340907.1| PREDICTED: mediator of RNA polymerase II tra... 142 2e-36
ref|XP_007225455.1| hypothetical protein PRUPE_ppa000298mg [Prun... 142 3e-36
ref|XP_007034585.1| REF4-related 1 [Theobroma cacao] gi|50871361... 139 3e-36
ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citr... 139 4e-36
gb|KDO74831.1| hypothetical protein CISIN_1g001375mg [Citrus sin... 139 4e-36
ref|XP_009777924.1| PREDICTED: mediator of RNA polymerase II tra... 140 5e-36
ref|XP_010649855.1| PREDICTED: mediator of RNA polymerase II tra... 137 3e-35
ref|XP_010649858.1| PREDICTED: mediator of RNA polymerase II tra... 137 3e-35
ref|XP_008223018.1| PREDICTED: mediator of RNA polymerase II tra... 139 4e-35
ref|XP_010322737.1| PREDICTED: mediator of RNA polymerase II tra... 137 5e-35
ref|XP_006339413.1| PREDICTED: mediator of RNA polymerase II tra... 135 1e-34
>ref|XP_011090810.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Sesamum indicum]
Length = 1326
Score = 164 bits (415), Expect(2) = 2e-43
Identities = 81/109 (74%), Positives = 94/109 (86%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGSKNEVPRTRRMDL 148
ERDPIEGPVPRLDTR+ MLLSITTLV+ADLVEEEE+VA DE G+KN+VP RRMDL
Sbjct: 384 ERDPIEGPVPRLDTRLSMLLSITTLVVADLVEEEESVAADEFGYDLGNKNQVPGKRRMDL 443
Query: 147 FFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
FS+QNL ++QSL+TPP+S I NQAAAKAMMF+SGINVG+AYFEC+S
Sbjct: 444 IFSLQNLHDYQSLLTPPQSAIPATNQAAAKAMMFVSGINVGTAYFECMS 492
Score = 38.5 bits (88), Expect(2) = 2e-43
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTWKGI 318
TSA+E+I GLVK+LQAIN+T+W I
Sbjct: 345 TSAVEIITGLVKSLQAINATSWHEI 369
>ref|XP_012858371.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Erythranthe guttatus]
Length = 1302
Score = 153 bits (387), Expect(2) = 1e-39
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGSKNEVPRTRRMDL 148
ERDPIEGPVPRLDTR+ MLLSITTLV+ADLVEEEE+VA DE E K+ + RRMDL
Sbjct: 372 ERDPIEGPVPRLDTRLSMLLSITTLVVADLVEEEESVAVDEFEYCLEIKHRISGKRRMDL 431
Query: 147 FFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
FS+QNL E+QSL+TPP+SVI ANQAA+KAMMFISGI VG+AYF+ IS
Sbjct: 432 IFSLQNLHEYQSLLTPPQSVISAANQAASKAMMFISGITVGTAYFDSIS 480
Score = 36.6 bits (83), Expect(2) = 1e-39
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTWKGI 318
TSAIE+I GLVK+LQAI+ T+W I
Sbjct: 333 TSAIEIITGLVKSLQAIHITSWHAI 357
>gb|EYU43842.1| hypothetical protein MIMGU_mgv1a0002972mg, partial [Erythranthe
guttata]
Length = 1207
Score = 153 bits (387), Expect(2) = 1e-39
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGSKNEVPRTRRMDL 148
ERDPIEGPVPRLDTR+ MLLSITTLV+ADLVEEEE+VA DE E K+ + RRMDL
Sbjct: 277 ERDPIEGPVPRLDTRLSMLLSITTLVVADLVEEEESVAVDEFEYCLEIKHRISGKRRMDL 336
Query: 147 FFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
FS+QNL E+QSL+TPP+SVI ANQAA+KAMMFISGI VG+AYF+ IS
Sbjct: 337 IFSLQNLHEYQSLLTPPQSVISAANQAASKAMMFISGITVGTAYFDSIS 385
Score = 36.6 bits (83), Expect(2) = 1e-39
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTWKGI 318
TSAIE+I GLVK+LQAI+ T+W I
Sbjct: 238 TSAIEIITGLVKSLQAIHITSWHAI 262
>ref|XP_012481826.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Gossypium raimondii] gi|763761028|gb|KJB28282.1|
hypothetical protein B456_005G040400 [Gossypium
raimondii]
Length = 1327
Score = 145 bits (365), Expect(2) = 2e-37
Identities = 72/112 (64%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGS---KNEVPRTRR 157
ERDPIEGP+PRLDTR+CMLLSI TLV+ADL+EEEE TDE E G + + + PR RR
Sbjct: 384 ERDPIEGPMPRLDTRLCMLLSIMTLVVADLIEEEEGAPTDETEYGSTNHWKEMKFPRKRR 443
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L ++Q L+ PPK V+ ANQAAAKAM+F+SGINVGSAYFEC++
Sbjct: 444 ADLVSSLQVLGDYQGLLAPPKFVVSAANQAAAKAMLFVSGINVGSAYFECVN 495
Score = 37.4 bits (85), Expect(2) = 2e-37
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSA+E+I GL KTLQAIN T W
Sbjct: 345 TSAVEIITGLTKTLQAINGTNW 366
>gb|KHG14892.1| hypothetical protein F383_10620 [Gossypium arboreum]
Length = 1325
Score = 145 bits (365), Expect(2) = 2e-37
Identities = 72/112 (64%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGS---KNEVPRTRR 157
ERDPIEGP+PRLDTR+CMLLSI TLV+ADL+EEEE TDE E G + + + PR RR
Sbjct: 384 ERDPIEGPMPRLDTRLCMLLSIMTLVVADLIEEEEGAPTDETEYGSTNHWKEMKFPRKRR 443
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L ++Q L+ PPK V+ ANQAAAKAM+F+SGINVGSAYFEC++
Sbjct: 444 ADLVSSLQVLGDYQGLLAPPKFVVSAANQAAAKAMLFVSGINVGSAYFECVN 495
Score = 37.4 bits (85), Expect(2) = 2e-37
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSA+E+I GL KTLQAIN T W
Sbjct: 345 TSAVEIITGLTKTLQAINGTNW 366
>ref|XP_002516789.1| conserved hypothetical protein [Ricinus communis]
gi|223543877|gb|EEF45403.1| conserved hypothetical
protein [Ricinus communis]
Length = 1325
Score = 140 bits (352), Expect(2) = 2e-37
Identities = 67/112 (59%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGS---KNEVPRTRR 157
ERDPIEGP+PRLD R+C+LLSI LV++DL+EEEEN T+E E G + +N+ RR
Sbjct: 383 ERDPIEGPIPRLDARLCILLSIIPLVVSDLIEEEENAPTEESESGSTNHWKENKFQGKRR 442
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL FS+Q L +HQ L++PP+SV+ ANQAA KAM+F+SGI +GSAYFECI+
Sbjct: 443 NDLVFSLQLLGDHQGLLSPPQSVVSAANQAATKAMLFVSGITIGSAYFECIN 494
Score = 42.4 bits (98), Expect(2) = 2e-37
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE+I GLVKTLQA+NSTTW
Sbjct: 344 TSAIEIITGLVKTLQAVNSTTW 365
>ref|XP_012069510.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Jatropha curcas]
Length = 1323
Score = 140 bits (353), Expect(2) = 8e-37
Identities = 71/112 (63%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGSKNEVPRT---RR 157
ERDPIEGP+PRLDTR+C+LLS+ LV+ADL+EEEENV DE E G + + +T RR
Sbjct: 383 ERDPIEGPIPRLDTRLCILLSVVPLVVADLIEEEENVPIDEAECGPTNPWKDKKTTGKRR 442
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L +HQ L++PP+SV+ ANQAAAKAM+FISGINV SAYFECI+
Sbjct: 443 NDLVSSLQFLGDHQGLLSPPQSVVSAANQAAAKAMLFISGINVASAYFECIN 494
Score = 40.0 bits (92), Expect(2) = 8e-37
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE+I GL KTLQAIN+TTW
Sbjct: 344 TSAIEIITGLTKTLQAINNTTW 365
>ref|XP_009617286.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Nicotiana tomentosiformis]
Length = 1319
Score = 143 bits (360), Expect(2) = 8e-37
Identities = 71/111 (63%), Positives = 89/111 (80%), Gaps = 2/111 (1%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEG--GKGSKNEVPRTRRM 154
ERDPIEGP+PRLDTR+CML SI TLV+ADL+EEEE+ A DEIE G+ K +V TRR
Sbjct: 378 ERDPIEGPMPRLDTRLCMLFSIITLVVADLIEEEESEACDEIESSIGRHMKKQVAGTRRR 437
Query: 153 DLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
D+ +Q+L ++QSL+TPP+++I ANQAAAKAMMF SGIN S+YFECI+
Sbjct: 438 DIVSCLQSLGDYQSLLTPPQAIITAANQAAAKAMMFRSGINTNSSYFECIN 488
Score = 37.4 bits (85), Expect(2) = 8e-37
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE+I LVK+LQAIN+TTW
Sbjct: 339 TSAIEIITDLVKSLQAINATTW 360
>emb|CDO98984.1| unnamed protein product [Coffea canephora]
Length = 1327
Score = 145 bits (365), Expect(2) = 1e-36
Identities = 76/110 (69%), Positives = 88/110 (80%), Gaps = 1/110 (0%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGSK-NEVPRTRRMD 151
ERDPIEGPVPRLDTR+CMLLSITTLV+ADL+EEEE+ TDEI+ S+ + RR D
Sbjct: 387 ERDPIEGPVPRLDTRLCMLLSITTLVVADLIEEEESAPTDEIDVDLDSQCKQTTGNRRGD 446
Query: 150 LFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
L S+QNL + + L+TPP SVI ANQAAAKAMMF+SGINVGSAYFE IS
Sbjct: 447 LASSLQNLGDFEMLLTPPHSVIPAANQAAAKAMMFVSGINVGSAYFESIS 496
Score = 35.0 bits (79), Expect(2) = 1e-36
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TS++E + GLVK LQAIN +TW
Sbjct: 348 TSSVETVTGLVKALQAINGSTW 369
>ref|XP_008340907.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Malus domestica]
Length = 1325
Score = 142 bits (357), Expect(2) = 2e-36
Identities = 71/112 (63%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGK---GSKNEVPRTRR 157
ER PIEGPVPRLDTR+CMLLSITTLV+ADL+EEEE T++ E G + EVPR RR
Sbjct: 382 ERYPIEGPVPRLDTRLCMLLSITTLVVADLIEEEEITPTNKNECGSINGWKEKEVPRQRR 441
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L ++Q L+TPP+ V+ ANQAAAKAM+F+SG+ VGSAYF+C+S
Sbjct: 442 NDLVSSLQTLGDYQGLLTPPQCVVSAANQAAAKAMLFLSGVTVGSAYFDCVS 493
Score = 37.4 bits (85), Expect(2) = 2e-36
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSA+E+I GL+KTL+AIN T+W
Sbjct: 343 TSAVEVITGLIKTLRAINGTSW 364
>ref|XP_007225455.1| hypothetical protein PRUPE_ppa000298mg [Prunus persica]
gi|462422391|gb|EMJ26654.1| hypothetical protein
PRUPE_ppa000298mg [Prunus persica]
Length = 1326
Score = 142 bits (359), Expect(2) = 3e-36
Identities = 71/112 (63%), Positives = 89/112 (79%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGS---KNEVPRTRR 157
ERDPIEGPVPRLDTR+CMLL ITTLV++DL+EEEE T+E E G + + EVP RR
Sbjct: 383 ERDPIEGPVPRLDTRLCMLLCITTLVVSDLIEEEEIAPTNETEYGSVNCWKEKEVPGKRR 442
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L ++Q L+TPP+SV+ ANQAAAKAM+ +SG+++GSAYFECIS
Sbjct: 443 YDLVSSLQMLGDYQGLLTPPQSVVSAANQAAAKAMLILSGVSIGSAYFECIS 494
Score = 35.8 bits (81), Expect(2) = 3e-36
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TS++E I GLVKT QAIN T+W
Sbjct: 344 TSSVETITGLVKTFQAINGTSW 365
>ref|XP_007034585.1| REF4-related 1 [Theobroma cacao] gi|508713614|gb|EOY05511.1|
REF4-related 1 [Theobroma cacao]
Length = 1325
Score = 139 bits (350), Expect(2) = 3e-36
Identities = 70/112 (62%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGSKNEVPRTRRM-- 154
ERDPIEGPVPRLDTR+CMLLSI TLV+A+L+EEEE TDE+E G + + + RR
Sbjct: 384 ERDPIEGPVPRLDTRLCMLLSIITLVVAELIEEEEGAPTDEMECGSTNHWKEKKCRRKCR 443
Query: 153 -DLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L ++Q L+ PP+SV+ ANQAAA+AM+F+SGINVGSAYFECI+
Sbjct: 444 DDLVSSLQVLGDYQGLLAPPQSVVSAANQAAARAMLFVSGINVGSAYFECIN 495
Score = 39.3 bits (90), Expect(2) = 3e-36
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE+I GL+KTLQAIN T+W
Sbjct: 345 TSAIEIITGLIKTLQAINGTSW 366
>ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citrus clementina]
gi|568872251|ref|XP_006489285.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 33A-like [Citrus
sinensis] gi|557521672|gb|ESR33039.1| hypothetical
protein CICLE_v10006738mg [Citrus clementina]
Length = 1331
Score = 139 bits (351), Expect(2) = 4e-36
Identities = 69/112 (61%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGG---KGSKNEVPRTRR 157
ERDPIEGP+PRLD R+CML S+TTL+IADL++EEE+ DE E G + +VP RR
Sbjct: 389 ERDPIEGPMPRLDPRLCMLFSVTTLLIADLIDEEESAPNDETECGFTYPWKEKKVPGKRR 448
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L ++Q L+TPP+SV+ ANQAAAKAM+F+SGI+VGSAYFECI+
Sbjct: 449 NDLVSSLQVLGDYQGLLTPPQSVVSAANQAAAKAMLFVSGIDVGSAYFECIN 500
Score = 38.5 bits (88), Expect(2) = 4e-36
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE+I L+KTLQAIN TTW
Sbjct: 350 TSAIEIITSLIKTLQAINGTTW 371
>gb|KDO74831.1| hypothetical protein CISIN_1g001375mg [Citrus sinensis]
Length = 1091
Score = 139 bits (351), Expect(2) = 4e-36
Identities = 69/112 (61%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGG---KGSKNEVPRTRR 157
ERDPIEGP+PRLD R+CML S+TTL+IADL++EEE+ DE E G + +VP RR
Sbjct: 149 ERDPIEGPMPRLDPRLCMLFSVTTLLIADLIDEEESAPNDETECGFTYPWKEKKVPGKRR 208
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L ++Q L+TPP+SV+ ANQAAAKAM+F+SGI+VGSAYFECI+
Sbjct: 209 NDLVSSLQVLGDYQGLLTPPQSVVSAANQAAAKAMLFVSGIDVGSAYFECIN 260
Score = 38.5 bits (88), Expect(2) = 4e-36
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE+I L+KTLQAIN TTW
Sbjct: 110 TSAIEIITSLIKTLQAINGTTW 131
>ref|XP_009777924.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X1 [Nicotiana sylvestris]
gi|698582790|ref|XP_009777925.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 33A isoform X2
[Nicotiana sylvestris]
Length = 1319
Score = 140 bits (353), Expect(2) = 5e-36
Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGG--KGSKNEVPRTRRM 154
ERDPIEGP+PRLDTR+CML SI TLV+ADL+EEEE+ A DEIE + KN+V TRR
Sbjct: 378 ERDPIEGPMPRLDTRLCMLFSIITLVVADLIEEEESEACDEIESSIDRHMKNQVAGTRRR 437
Query: 153 DLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
D+ +Q+L ++QSL+TPP+++ ANQAAAKAMMF SGIN S+YFECI+
Sbjct: 438 DIVSCLQSLGDYQSLLTPPQAITTAANQAAAKAMMFRSGINSNSSYFECIN 488
Score = 37.4 bits (85), Expect(2) = 5e-36
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE+I LVK+LQAIN+TTW
Sbjct: 339 TSAIEIITDLVKSLQAINATTW 360
>ref|XP_010649855.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X1 [Vitis vinifera]
gi|731389070|ref|XP_010649857.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 33A isoform X1
[Vitis vinifera]
Length = 1321
Score = 137 bits (344), Expect(2) = 3e-35
Identities = 71/112 (63%), Positives = 85/112 (75%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEG---GKGSKNEVPRTRR 157
ERDPIEGP+PRLDTR+C+LLSITTLV+ADL+EEEE+ DE E + VP R
Sbjct: 380 ERDPIEGPMPRLDTRLCLLLSITTLVVADLIEEEESAPNDETERHPTNHWKEKHVPGKCR 439
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L +++ L+TPP+SVI ANQAAAKAMM +SGINVGSAYFE IS
Sbjct: 440 KDLVSSLQMLGDYEGLLTPPQSVISAANQAAAKAMMLVSGINVGSAYFEFIS 491
Score = 38.1 bits (87), Expect(2) = 3e-35
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE I GL+K LQAIN TTW
Sbjct: 341 TSAIETITGLIKVLQAINGTTW 362
>ref|XP_010649858.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X2 [Vitis vinifera]
Length = 1191
Score = 137 bits (344), Expect(2) = 3e-35
Identities = 71/112 (63%), Positives = 85/112 (75%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEG---GKGSKNEVPRTRR 157
ERDPIEGP+PRLDTR+C+LLSITTLV+ADL+EEEE+ DE E + VP R
Sbjct: 250 ERDPIEGPMPRLDTRLCLLLSITTLVVADLIEEEESAPNDETERHPTNHWKEKHVPGKCR 309
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L +++ L+TPP+SVI ANQAAAKAMM +SGINVGSAYFE IS
Sbjct: 310 KDLVSSLQMLGDYEGLLTPPQSVISAANQAAAKAMMLVSGINVGSAYFEFIS 361
Score = 38.1 bits (87), Expect(2) = 3e-35
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE I GL+K LQAIN TTW
Sbjct: 211 TSAIETITGLIKVLQAINGTTW 232
>ref|XP_008223018.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Prunus mume]
Length = 1326
Score = 139 bits (349), Expect(2) = 4e-35
Identities = 70/112 (62%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEGGKGS---KNEVPRTRR 157
ERDPIEGPVPRLDTR+CMLL ITTLV++DL+EEEE T+E E G + + EV RR
Sbjct: 383 ERDPIEGPVPRLDTRLCMLLCITTLVVSDLIEEEEIAPTNETEYGSVNCWKEKEVLGKRR 442
Query: 156 MDLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
DL S+Q L ++Q L+TPP+SV+ ANQAAAKAM+ +SG+++GSAYFECIS
Sbjct: 443 YDLVSSLQMLGDYQGLLTPPQSVVSAANQAAAKAMLILSGVSIGSAYFECIS 494
Score = 35.8 bits (81), Expect(2) = 4e-35
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TS++E I GLVKT QAIN T+W
Sbjct: 344 TSSVETITGLVKTFQAINGTSW 365
>ref|XP_010322737.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Solanum lycopersicum]
Length = 1318
Score = 137 bits (344), Expect(2) = 5e-35
Identities = 72/111 (64%), Positives = 87/111 (78%), Gaps = 2/111 (1%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEG--GKGSKNEVPRTRRM 154
ERDPIEGPVPRLDTR+CML SI TLVIADL+EEEE+ A DEIE G+ K +V TRR
Sbjct: 378 ERDPIEGPVPRLDTRLCMLFSIITLVIADLIEEEESEACDEIESSIGRHMKKQVEGTRRE 437
Query: 153 DLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
D+ +QNL ++QSL+TPP++V ANQAAAKAMMF SG N ++YFECI+
Sbjct: 438 DVISCLQNLGDYQSLLTPPQAVTNAANQAAAKAMMFRSGAN--TSYFECIN 486
Score = 37.4 bits (85), Expect(2) = 5e-35
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE+I LVK+LQAIN+TTW
Sbjct: 339 TSAIEIITDLVKSLQAINATTW 360
>ref|XP_006339413.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum tuberosum]
Length = 1318
Score = 135 bits (341), Expect(2) = 1e-34
Identities = 72/111 (64%), Positives = 87/111 (78%), Gaps = 2/111 (1%)
Frame = -1
Query: 327 ERDPIEGPVPRLDTRMCMLLSITTLVIADLVEEEENVATDEIEG--GKGSKNEVPRTRRM 154
ERDPIEGPVPRLDTR+CML SI TLVIADL+EEEE+ A DEIE G+ K +V TRR
Sbjct: 378 ERDPIEGPVPRLDTRLCMLFSIITLVIADLIEEEESEACDEIESSIGRHMKKQVEGTRRG 437
Query: 153 DLFFSVQNLSEHQSLITPPKSVIEIANQAAAKAMMFISGINVGSAYFECIS 1
D+ +QNL ++QSL+TPP++V ANQAAAKAMMF SG N ++YFECI+
Sbjct: 438 DVVSCLQNLGDYQSLLTPPQAVTTAANQAAAKAMMFRSGAN--TSYFECIN 486
Score = 37.4 bits (85), Expect(2) = 1e-34
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -2
Query: 392 TSAIEMIAGLVKTLQAINSTTW 327
TSAIE+I LVK+LQAIN+TTW
Sbjct: 339 TSAIEIITDLVKSLQAINATTW 360