BLASTX nr result

ID: Forsythia22_contig00042541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00042541
         (601 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago ...    60   8e-07
ref|XP_003605618.1| Photosystem II reaction center protein M [Me...    39   6e-06

>ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
           gi|355518112|gb|AES99735.1| hypothetical protein
           MTR_5g084150 [Medicago truncatula]
          Length = 187

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 36/80 (45%), Positives = 40/80 (50%)
 Frame = +3

Query: 129 GGSTRLANYWAELDLNQHKHIANKFTFCPC*LLRYQPRKNPF*AYW*SMTNFLS*YPTPR 308
           GGS    N+WAELDLNQ +HIAN+FT                             YPTPR
Sbjct: 16  GGSV---NFWAELDLNQRRHIANEFT-----------------------------YPTPR 43

Query: 309 GIRIPAASLKERCSKQDNGG 368
           G RIP ASLKERC K  + G
Sbjct: 44  GSRIPVASLKERCPKPLDDG 63


>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
          Length = 164

 Score = 38.5 bits (88), Expect(2) = 6e-06
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -1

Query: 412 IVHTMIIVRGLWASRPPLSC-LEHLSFKEAAGIRIPLG 302
           +VH + +  G  AS PP S  L HLSFKEA GIR+PLG
Sbjct: 34  LVH-LFVTNGGRASMPPSSSGLGHLSFKEATGIRLPLG 70



 Score = 38.5 bits (88), Expect(2) = 6e-06
 Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 4/34 (11%)
 Frame = -3

Query: 224 QLTGTECKFVGNMFMLVQIQLGPII----CQSGA 135
           +L GT+CKFVGNM  LVQIQL  ++    CQ G+
Sbjct: 71  RLMGTDCKFVGNMSTLVQIQLVQLVRAPPCQGGS 104


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