BLASTX nr result
ID: Forsythia22_contig00037862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00037862
(290 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 85 4e-20
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 81 5e-18
ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449... 77 6e-18
emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera] 79 1e-17
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 79 2e-17
ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975... 77 3e-17
emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera] 87 2e-16
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 73 1e-13
ref|XP_009358232.1| PREDICTED: uncharacterized protein LOC103948... 73 1e-13
ref|XP_012477592.1| PREDICTED: uncharacterized protein LOC105793... 80 4e-13
ref|XP_008363252.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 60 2e-11
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 62 3e-11
emb|CAN80110.1| hypothetical protein VITISV_013165 [Vitis vinifera] 70 3e-11
gb|ABA96959.2| retrotransposon protein, putative, Ty1-copia subc... 58 5e-11
ref|XP_006605017.1| PREDICTED: uncharacterized protein LOC102660... 70 7e-11
gb|AAX96510.1| retrotransposon protein, putative, Ty1-copia sub-... 57 7e-11
gb|ABA93952.1| retrotransposon protein, putative, Ty1-copia subc... 57 2e-10
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc... 57 3e-10
emb|CAN79527.1| hypothetical protein VITISV_044108 [Vitis vinifera] 63 3e-10
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc... 57 3e-10
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 85.1 bits (209), Expect(2) = 4e-20
Identities = 41/64 (64%), Positives = 49/64 (76%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GA+S KSSKQTCI+RS +E +FIALDK G+ E L+NFLE+I WP PV ICIHCD+Q
Sbjct: 1132 GAVSWKSSKQTCIARSTMESKFIALDKAGKEAEWLQNFLEDIPFWPKPVGPICIHCDSQA 1191
Query: 14 TIAR 3
I R
Sbjct: 1192 AIGR 1195
Score = 39.3 bits (90), Expect(2) = 4e-20
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
LHY KY +++GYSDAN E KSTS YVFT
Sbjct: 1095 LHYNKYPAMIEGYSDANWITGSNEVKSTSGYVFT 1128
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 80.9 bits (198), Expect(2) = 5e-18
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = -1
Query: 191 AIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQTT 12
A+S KSSKQT I+RS +E EFIALDK GE E LR+FLE+I W PVP ICIHCD+Q+
Sbjct: 1187 AVSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSA 1246
Query: 11 IAR 3
I R
Sbjct: 1247 IGR 1249
Score = 36.6 bits (83), Expect(2) = 5e-18
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
LHY +Y V++GYSDAN +SKS S YVFT
Sbjct: 1149 LHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFT 1182
>ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]
Length = 2699
Score = 76.6 bits (187), Expect(2) = 6e-18
Identities = 38/63 (60%), Positives = 46/63 (73%)
Frame = -1
Query: 191 AIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQTT 12
AIS KSSKQ CI+RS +EFEFI LD GE E L+NF+E+I +WP V AICIHCD+
Sbjct: 2626 AISWKSSKQKCIARSTMEFEFITLDLAGEEAEWLKNFVEDIPMWPKLVTAICIHCDSMAA 2685
Query: 11 IAR 3
+R
Sbjct: 2686 QSR 2688
Score = 40.4 bits (93), Expect(2) = 6e-18
Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
LHY KY +V+G+SDAN ESKSTS YVFT
Sbjct: 2588 LHYTKYPPIVEGFSDANWISDTTESKSTSGYVFT 2621
>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
Length = 313
Score = 79.3 bits (194), Expect(2) = 1e-17
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = -1
Query: 191 AIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQTT 12
A S KSSKQT I+RS +E EFIALDK GE E LR+FLE+I W PVP ICIHCD+Q+
Sbjct: 184 AXSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSA 243
Query: 11 IAR 3
I R
Sbjct: 244 IGR 246
Score = 36.6 bits (83), Expect(2) = 1e-17
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
LHY +Y V++GYSDAN +SKS S YVFT
Sbjct: 146 LHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFT 179
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 78.6 bits (192), Expect(2) = 2e-17
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -1
Query: 191 AIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQTT 12
A+S KSSKQ I+RS +E EFIALDK GE E LR+FLE+I W PVP ICIHCD+Q+
Sbjct: 1148 AVSWKSSKQXVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSA 1207
Query: 11 IAR 3
I R
Sbjct: 1208 IGR 1210
Score = 36.6 bits (83), Expect(2) = 2e-17
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
LHY +Y V++GYSDAN +SKS S YVFT
Sbjct: 1110 LHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFT 1143
>ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975464 [Erythranthe
guttatus]
Length = 1203
Score = 77.4 bits (189), Expect(2) = 3e-17
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -1
Query: 191 AIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQTT 12
A+S KS+KQTCI+RS +E EFIALDK G E RNFLE+I W PVP I IHCD+Q+
Sbjct: 452 AVSWKSTKQTCIARSTMESEFIALDKIGAEAEWPRNFLEDIPCWNKPVPTILIHCDSQSA 511
Query: 11 IAR 3
I R
Sbjct: 512 IGR 514
Score = 37.4 bits (85), Expect(2) = 3e-17
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN*ES-----KSTSDYVFT 203
LHY +Y V++GYSDAN S KSTS YVFT
Sbjct: 414 LHYTRYPSVLEGYSDANWISDTKDYKSTSGYVFT 447
>emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera]
Length = 422
Score = 87.0 bits (214), Expect(2) = 2e-16
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = -1
Query: 191 AIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQTT 12
A+S KSSKQTCI+RS +E EFIA+DK GE E LRNFLE+I W PV AICIHCD+Q+T
Sbjct: 294 AVSWKSSKQTCIARSTMESEFIAIDKAGEEAEXLRNFLEDIPNWSKPVXAICIHCDSQST 353
Query: 11 IAR 3
I R
Sbjct: 354 IGR 356
Score = 24.6 bits (52), Expect(2) = 2e-16
Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 5/22 (22%)
Frame = -2
Query: 253 YSDAN*-----ESKSTSDYVFT 203
YSDAN +SKSTS YVFT
Sbjct: 268 YSDANWISDSKDSKSTSGYVFT 289
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 73.2 bits (178), Expect(2) = 1e-13
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -1
Query: 170 KQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQTTIAR 3
KQT I+RS +E EFIALDK GE E LR+FLE+I W PVP ICIHCD+Q+ I R
Sbjct: 974 KQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSAIGR 1029
Score = 29.6 bits (65), Expect(2) = 1e-13
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN 239
LHY +Y V++GYSDAN
Sbjct: 943 LHYTRYPAVLEGYSDAN 959
>ref|XP_009358232.1| PREDICTED: uncharacterized protein LOC103948872 [Pyrus x
bretschneideri]
Length = 609
Score = 73.2 bits (178), Expect(2) = 1e-13
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 191 AIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDN 21
AIS KSSKQTCI+RS +E EFI LD G E LR+FLE++ IW PV AICIHCD+
Sbjct: 481 AISWKSSKQTCIARSTMESEFIPLDMAGGEAEWLRDFLEDVPIWRKPVMAICIHCDS 537
Score = 29.6 bits (65), Expect(2) = 1e-13
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN*-----ESKSTSDYVFT 203
L + +Y V++G++DAN ++KSTS YVFT
Sbjct: 443 LWHSRYPPVLEGFTDANWISDSNDTKSTSGYVFT 476
>ref|XP_012477592.1| PREDICTED: uncharacterized protein LOC105793213 [Gossypium
raimondii]
Length = 431
Score = 80.5 bits (197), Expect = 4e-13
Identities = 38/64 (59%), Positives = 51/64 (79%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GA+S KSS+Q I+RS +EFEF+AL+K+GE + L+NFL++I WP VP ICI+CDNQ+
Sbjct: 333 GAVSWKSSRQMIITRSTMEFEFVALNKSGEEAKWLQNFLKDISEWPKSVPIICIYCDNQS 392
Query: 14 TIAR 3
TI R
Sbjct: 393 TIGR 396
>ref|XP_008363252.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103426950 [Malus domestica]
Length = 724
Score = 59.7 bits (143), Expect(2) = 2e-11
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = -1
Query: 191 AIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAI 39
AIS KSS QTCI+ S +E EFIALD G E LR+FLE++ IWP P+P +
Sbjct: 316 AISWKSSXQTCIAXSTMESEFIALDMAGGEAEWLRDFLEDVPIWPKPLPKV 366
Score = 35.0 bits (79), Expect(2) = 2e-11
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
LHY +Y V++G++DAN ++KSTS YVFT
Sbjct: 278 LHYTRYPPVLEGFTDANWISDSTDTKSTSGYVFT 311
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 61.6 bits (148), Expect(2) = 3e-11
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GA++ +S++QT I+RS +E EF+AL+ G E L+NFL NI + P P++ +HCD Q+
Sbjct: 1151 GAVTWRSARQTIIARSTMESEFVALEMAGSEAEWLKNFLANIPLGMKPTPSVSMHCDCQS 1210
Query: 14 TIA 6
IA
Sbjct: 1211 AIA 1213
Score = 32.7 bits (73), Expect(2) = 3e-11
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
+ Y + V++GYSDAN E+KSTS YVFT
Sbjct: 1114 IEYSGFPAVLEGYSDANWISDSDETKSTSGYVFT 1147
>emb|CAN80110.1| hypothetical protein VITISV_013165 [Vitis vinifera]
Length = 811
Score = 69.7 bits (169), Expect(2) = 3e-11
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GA+S KS+KQTCI+ S +E EFIAL+KT +E +RN L +I +W P P + + CD+Q
Sbjct: 548 GAVSWKSAKQTCITWSTMEAEFIALEKTSSKIEWIRNLLADISLWTRPAPXMFMXCDSQA 607
Query: 14 TIAR 3
TIA+
Sbjct: 608 TIAK 611
Score = 24.6 bits (52), Expect(2) = 3e-11
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 5/23 (21%)
Frame = -2
Query: 256 GYSDAN*-----ESKSTSDYVFT 203
G+SDAN E KSTS YVFT
Sbjct: 522 GFSDANWISDSYEMKSTSGYVFT 544
>gb|ABA96959.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 920
Score = 57.8 bits (138), Expect(2) = 5e-11
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GA+S KS KQT ++RS +E E ALD E LR FL ++ + PVPAI ++CDNQT
Sbjct: 769 GAVSWKSCKQTILTRSTMEAELTALDTATVEAEWLREFLMDLPVVEKPVPAILMNCDNQT 828
Query: 14 TIAR 3
I +
Sbjct: 829 VIIK 832
Score = 35.8 bits (81), Expect(2) = 5e-11
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
+HY Y +V++GYSD+N E K+TS+YVFT
Sbjct: 732 IHYTGYPKVLEGYSDSNWISDADEIKATSEYVFT 765
>ref|XP_006605017.1| PREDICTED: uncharacterized protein LOC102660537 [Glycine max]
Length = 1533
Score = 70.1 bits (170), Expect(2) = 7e-11
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GAIS S KQTCI+ S +E EF+AL G+ E LRN + I +WP P+P + I CD+QT
Sbjct: 342 GAISWASKKQTCITNSTMESEFVALAAAGKEAEWLRNLIYEIPLWPKPIPPMSIRCDSQT 401
Query: 14 TIAR 3
T+A+
Sbjct: 402 TLAK 405
Score = 23.1 bits (48), Expect(2) = 7e-11
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVF 206
L Y + V++GYSDA+ + STS +VF
Sbjct: 305 LTYTGFPSVIEGYSDASWITNMEDYSSTSGWVF 337
>gb|AAX96510.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550477|gb|ABA93274.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 643
Score = 57.0 bits (136), Expect(2) = 7e-11
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GA+S KS KQT ++RS +E EF ALD E LR L ++ + PVPAI ++CDNQT
Sbjct: 508 GAVSWKSCKQTILTRSTMEAEFTALDIATVEAEWLRELLMDLSVVEKPVPAILMNCDNQT 567
Query: 14 TIAR 3
I +
Sbjct: 568 MIIK 571
Score = 36.2 bits (82), Expect(2) = 7e-11
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
+HY +Y +V++GYSD+N E K+TS YVFT
Sbjct: 471 IHYARYPKVLEGYSDSNWISDADEIKATSGYVFT 504
>gb|ABA93952.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1336
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GA+S +S KQT ++RS +E E ALD E LR+ L ++L+ PVPAI ++CDNQT
Sbjct: 1173 GAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLLVVEKPVPAILMNCDNQT 1232
Query: 14 T 12
T
Sbjct: 1233 T 1233
Score = 34.3 bits (77), Expect(2) = 2e-10
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
LHY Y V++GYSD+N E K+TS YVFT
Sbjct: 1136 LHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFT 1169
>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1235
Score = 57.0 bits (136), Expect(2) = 3e-10
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GA+S +S KQT ++RS +E E ALD E LR+ L N+ + PVPAI ++CDNQT
Sbjct: 1106 GAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMNLPVVEKPVPAILMNCDNQT 1165
Query: 14 TIAR 3
I +
Sbjct: 1166 VIVK 1169
Score = 34.3 bits (77), Expect(2) = 3e-10
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
LHY Y V++GYSD+N E K+TS YVFT
Sbjct: 1069 LHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFT 1102
>emb|CAN79527.1| hypothetical protein VITISV_044108 [Vitis vinifera]
Length = 330
Score = 62.8 bits (151), Expect(2) = 3e-10
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = -1
Query: 191 AIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQTT 12
A+S K +K+TCI+RSIIE EFIAL+ VE LRN L +I +W P + + CD+Q
Sbjct: 163 AVSWKFAKKTCITRSIIEIEFIALENASSKVEWLRNILTDIPLWTRPALFVSMRCDSQVA 222
Query: 11 IAR 3
IA+
Sbjct: 223 IAK 225
Score = 28.5 bits (62), Expect(2) = 3e-10
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVF 206
L++ + V++G+SDAN E KSTS YVF
Sbjct: 125 LYFSGFPSVLEGFSDANWISNSNEMKSTSGYVF 157
>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 622
Score = 56.6 bits (135), Expect(2) = 3e-10
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = -1
Query: 194 GAIS*KSSKQTCISRSIIEFEFIALDKTGE*VE*LRNFLENILIWPMPVPAICIHCDNQT 15
GA+S +S KQT ++RSI+E E ALD E LR+ L ++ + PVPAI ++CDNQT
Sbjct: 468 GAVSWRSCKQTILTRSIMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQT 527
Query: 14 T 12
T
Sbjct: 528 T 528
Score = 34.3 bits (77), Expect(2) = 3e-10
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
Frame = -2
Query: 289 LHYEKYARVVQGYSDAN-----*ESKSTSDYVFT 203
LHY Y V++GYSD+N E K+TS YVFT
Sbjct: 431 LHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFT 464