BLASTX nr result

ID: Forsythia22_contig00037134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00037134
         (312 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090804.1| PREDICTED: glycine-rich RNA-binding protein ...    65   2e-08
ref|XP_009617118.1| PREDICTED: RNA-binding motif protein, Y chro...    59   1e-06
ref|XP_009617117.1| PREDICTED: nuclear cap-binding protein subun...    59   1e-06

>ref|XP_011090804.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
           [Sesamum indicum]
          Length = 172

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 40/92 (43%), Positives = 50/92 (54%)
 Frame = -1

Query: 276 MAIFSLLCNSSISSIRFQINFANQTPFSSKFLIPIKSVFDNSKLSTFHPTILCNSSIQKP 97
           MA+FS  C   I   +F    A Q PFSSK      S F   ++S   P    N+ I+K 
Sbjct: 1   MALFSSPCKPPILCPKFHRIRAIQRPFSSKSSTSKTSNFGTPRISISDPATQINTPIRKA 60

Query: 96  HYCSSLSPSNEPDKIDPPTTIIFIKGLAQSTS 1
            +CSSLS   E D+  P + IIF+KGLAQSTS
Sbjct: 61  QFCSSLSSPGELDEGVPSSVIIFVKGLAQSTS 92


>ref|XP_009617118.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
           B isoform X2 [Nicotiana tomentosiformis]
          Length = 167

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 37/92 (40%), Positives = 50/92 (54%)
 Frame = -1

Query: 276 MAIFSLLCNSSISSIRFQINFANQTPFSSKFLIPIKSVFDNSKLSTFHPTILCNSSIQKP 97
           MA+F   CN +++SI F  +FA    F S    P   +  + K+S F P I  + S +KP
Sbjct: 1   MALFCSPCNKTLTSISFA-SFAIPKAFKS----PYPPILSSEKVSNFTPRISIDLSQKKP 55

Query: 96  HYCSSLSPSNEPDKIDPPTTIIFIKGLAQSTS 1
           H       S EPD     TTIIF+KGLA+ST+
Sbjct: 56  HLPKCSDSSAEPDNTANSTTIIFLKGLAKSTA 87


>ref|XP_009617117.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform X1
           [Nicotiana tomentosiformis]
          Length = 183

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 37/92 (40%), Positives = 50/92 (54%)
 Frame = -1

Query: 276 MAIFSLLCNSSISSIRFQINFANQTPFSSKFLIPIKSVFDNSKLSTFHPTILCNSSIQKP 97
           MA+F   CN +++SI F  +FA    F S    P   +  + K+S F P I  + S +KP
Sbjct: 1   MALFCSPCNKTLTSISFA-SFAIPKAFKS----PYPPILSSEKVSNFTPRISIDLSQKKP 55

Query: 96  HYCSSLSPSNEPDKIDPPTTIIFIKGLAQSTS 1
           H       S EPD     TTIIF+KGLA+ST+
Sbjct: 56  HLPKCSDSSAEPDNTANSTTIIFLKGLAKSTA 87


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