BLASTX nr result

ID: Forsythia22_contig00036057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00036057
         (511 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDX82381.1| BnaA03g34400D [Brassica napus]                         65   2e-08
ref|XP_011073361.1| PREDICTED: vegetative cell wall protein gp1-...    60   7e-07
emb|CDX84578.1| BnaA03g16520D [Brassica napus]                         58   2e-06
emb|CDO98203.1| unnamed protein product [Coffea canephora]             58   3e-06

>emb|CDX82381.1| BnaA03g34400D [Brassica napus]
          Length = 528

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 27/72 (37%), Positives = 33/72 (45%)
 Frame = +3

Query: 288 CMWPWFQWIFWWCEYRKKWWLWRRFIRWREEDVWWLLWWCEYRKKRWVWPRLI*WRGKNG 467
           C W  + W +WWC     WW  RR  RWR    WW  WWC  R++ W W     W  +  
Sbjct: 459 CWWRCWWWCWWWC-----WWRTRRRARWR--CWWWCRWWCRIRRRIWCW-----WWCR-- 504

Query: 468 D*RRCWSFFKWW 503
             RR W   +WW
Sbjct: 505 --RRSWWRIRWW 514



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 36/108 (33%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
 Frame = +3

Query: 120 WQRLHRSL-RYIWIINHWRWQEQIRCLWDCKCWSLNYTSFCCGRAECDRWKGER*FRCMW 296
           W+   RS  RY W    W W    RC W C  W                W+  R  R  W
Sbjct: 445 WRTRRRSRWRYWW----WCWW---RCWWWCWWWCW--------------WRTRR--RARW 481

Query: 297 PWFQWIFWWCEYRKK---WWLWRRFIRWREEDVWWLLWWCEYRKKRWV 431
             + W  WWC  R++   WW  RR   WR    WW  WWC +R  RW+
Sbjct: 482 RCWWWCRWWCRIRRRIWCWWWCRRRSWWRIR--WW--WWCRWRVWRWI 525


>ref|XP_011073361.1| PREDICTED: vegetative cell wall protein gp1-like [Sesamum indicum]
          Length = 373

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 236 ETGVIQTPTFTIPQAPDLFLPPPVIDNPDVPQTPVQPLPFIT 111
           + GV+QTPTF IPQAPD F PPP+++ PD   TPVQP+PFIT
Sbjct: 306 DPGVVQTPTFPIPQAPD-FYPPPLVNQPD---TPVQPVPFIT 343


>emb|CDX84578.1| BnaA03g16520D [Brassica napus]
          Length = 154

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
 Frame = +3

Query: 300 WFQWIFWWCEYRKKWWLWRRFIRWREEDVWWLLWWCEYR-----KKRWVWPRLI*WRGKN 464
           W+ WI  W    + WW   R+ +WR    WW  W C +R     ++RW W R+  WRG  
Sbjct: 18  WWSWIRRW----RSWWARWRWRKWRRR--WWRSWRCTWRWIRWWRRRWCWRRIWRWRG-- 69

Query: 465 GD*RRCWSFFKWWQ 506
              R  W +++WW+
Sbjct: 70  ---RWTWRWWRWWK 80



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/116 (32%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
 Frame = +3

Query: 168 WRWQEQIRCLWDCKCWSLNYTSFCCGRAECDRWKGER*FRCMWPWFQWIFWWCEYRKKWW 347
           W W  + R  W    W          R    RW   R +RC W   +WI WW    ++ W
Sbjct: 19  WSWIRRWRSWWARWRW----------RKWRRRWW--RSWRCTW---RWIRWW----RRRW 59

Query: 348 LWRRFIRWREEDVW-WLLWWCEYRKKRWVWPRLI*WRGKNGD*RRCWSF--FKWWQ 506
            WRR  RWR    W W  WW   R +R  W R   W  +     R WS+   +WWQ
Sbjct: 60  CWRRIWRWRGRWTWRWWRWWKRRRWRRRFWRR---WSSRWWLRCRRWSWRGIRWWQ 112


>emb|CDO98203.1| unnamed protein product [Coffea canephora]
          Length = 426

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = -3

Query: 230 GVIQTPTFTIPQAPDLFLPPPVIDNPDVPQTPVQPLPFI 114
           GV Q+PTF +PQAPD+F  PP++  PD+P++P QPLPF+
Sbjct: 352 GVFQSPTFPLPQAPDVFFAPPLL--PDIPESPFQPLPFV 388


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