BLASTX nr result

ID: Forsythia22_contig00035809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00035809
         (406 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_044299.1| putative transport protein [Soybean chlorotic m...    59   1e-06

>ref|NP_044299.1| putative transport protein [Soybean chlorotic mottle virus]
           gi|139996|sp|P15631.1|MVP_SOCMV RecName: Full=Movement
           protein; Short=Mov; AltName: Full=Cell-to-cell transport
           protein; AltName: Full=ORF IA [Soybean chlorotic mottle
           virus] gi|58842|emb|CAA33833.1| putative transport
           protein [Soybean chlorotic mottle virus]
          Length = 303

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 34/114 (29%), Positives = 58/114 (50%)
 Frame = +1

Query: 61  YLFSISYLVNYAIHNQHNMTIVREPKGIKIDPLFTDYLEHKESEFVWLVQPSKRSIEIDP 240
           + FSISY +NYA+ N H+    ++ + I ID LF++ LE K   F  L +     IE  P
Sbjct: 190 HAFSISYRINYALSNSHHSVEFKQKEKIYIDELFSEVLELKHPVFSKLTKSQSLRIEPSP 249

Query: 241 RQERTLVKEQKPLLLRTKSLRKPPHNNWREKQESSQAEQLRQLSETVNQMAKEI 402
             E+ L+  ++      K++ KPP  ++   + S     +  L++ V  + K+I
Sbjct: 250 VFEKPLISFKENQKTEEKTVFKPPKRDFELTETSKLKSMISDLTQKVVNLDKKI 303


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