BLASTX nr result

ID: Forsythia22_contig00033065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00033065
         (279 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010110245.1| ABC transporter C family member 2 [Morus not...    51   5e-06
emb|CAN80368.1| hypothetical protein VITISV_014720 [Vitis vinifera]    47   9e-06

>ref|XP_010110245.1| ABC transporter C family member 2 [Morus notabilis]
           gi|587938935|gb|EXC25624.1| ABC transporter C family
           member 2 [Morus notabilis]
          Length = 1167

 Score = 50.8 bits (120), Expect(2) = 5e-06
 Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
 Frame = +2

Query: 83  GCTSRNRTWKIVEWPKRKRAVGCKLVFTVKHTADCCGAIQG*TRLTSYKGFAQD-----R 247
           G   +N TW+IVE P +K+ VGCK VFTVK  AD  G++         KGF Q      +
Sbjct: 74  GALEKNGTWEIVELPSKKKTVGCKWVFTVKFNAD--GSVNRYKARLVAKGFTQAYGIDYK 131

Query: 248 EIFAPL 265
           E FAP+
Sbjct: 132 ETFAPV 137



 Score = 25.8 bits (55), Expect(2) = 5e-06
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 12  LSISSNTQNALRDPKWENTLFEEMDA 89
           + I  + + AL DPKW   + EEM A
Sbjct: 50  VKIQKDIKEALTDPKWRLAVQEEMGA 75


>emb|CAN80368.1| hypothetical protein VITISV_014720 [Vitis vinifera]
          Length = 869

 Score = 46.6 bits (109), Expect(2) = 9e-06
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
 Frame = +2

Query: 95  RNRTWKIVEWPKRKRAVGCKLVFTVKHTADCCGAIQG*TRLTSYKGFAQD-----REIFA 259
           +N TW++V+ PK K+ VGCK VF +K  AD  G+++        KGF Q      +E FA
Sbjct: 423 KNGTWEVVDLPKEKKVVGCKWVFMIKSKAD--GSVERYKARLVAKGFTQTYGIDYQETFA 480

Query: 260 PL 265
           P+
Sbjct: 481 PI 482



 Score = 29.3 bits (64), Expect(2) = 9e-06
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 12  LSISSNTQNALRDPKWENTLFEEMDA 89
           L +  N Q AL +P W+  +FEEM+A
Sbjct: 395 LVVPRNIQEALDEPSWKLAVFEEMNA 420


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