BLASTX nr result

ID: Forsythia22_contig00032370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00032370
         (292 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011074773.1| PREDICTED: zinc finger CCCH domain-containin...    68   2e-09

>ref|XP_011074773.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
           [Sesamum indicum] gi|747056984|ref|XP_011074774.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           55-like [Sesamum indicum]
           gi|747056986|ref|XP_011074775.1| PREDICTED: zinc finger
           CCCH domain-containing protein 55-like [Sesamum indicum]
          Length = 838

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 31/128 (24%)
 Frame = +2

Query: 2   EDETEPSAGMSDYNSRTGKKHHSSYDNGWDQDFSASENTNA-LVRDDSGLPSSEPLQGN- 175
           E+ET+  + +S++NS TGK+H SS+D G   ++SAS    A   RD SG PS E  + N 
Sbjct: 14  EEETKHFSELSEHNSLTGKEH-SSHDIGRYHEYSASRAYTAPRSRDQSGQPSRESTEANP 72

Query: 176 -----------------------------NVSLYFDGSGHCNHNHTPEKDWSYSSRYIGR 268
                                        N+S  FDG+    +NH+PE D S+S RY+GR
Sbjct: 73  VAPVNDSLVKSRQNASEGKEIGEGNRYYQNLSPGFDGAERRKYNHSPENDRSHSRRYLGR 132

Query: 269 DRSKSRRR 292
            RS+SR R
Sbjct: 133 GRSRSRSR 140


Top