BLASTX nr result
ID: Forsythia22_contig00030767
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00030767
(361 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008964858.1| RNA polymerase beta' subunit (chloroplast) [... 61 2e-12
ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum in... 60 2e-11
ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana su... 60 2e-11
ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea su... 60 2e-11
ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea su... 60 2e-11
gb|ADD31164.1| RNA polymerase beta' subunit protein (chloroplast... 60 2e-11
ref|YP_009002249.1| RNA polymerase beta' subunit (chloroplast) [... 60 2e-11
gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum] 60 2e-11
ref|YP_009092058.1| RNA polymerase beta (chloroplast) [Spirodela... 58 2e-11
ref|YP_009144618.1| RNA polymerase beta' subunit (chloroplast) [... 60 2e-11
gb|AFV61805.1| RNA polymerase beta' subunit (chloroplast) [Origa... 60 2e-11
ref|YP_009110593.1| RNA polymerase beta' chain (chloroplast) [He... 60 2e-11
ref|YP_004940501.1| rpoC1 gene product (chloroplast) [Boea hygro... 61 3e-11
gb|ADD31175.1| RNA polymerase beta' subunit protein (chloroplast... 58 4e-11
ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia a... 58 5e-11
ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiell... 58 5e-11
gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [G... 56 5e-11
gb|ADD31179.1| RNA polymerase beta' subunit protein (chloroplast... 58 6e-11
dbj|BAC77550.1| RNA polymerase beta' subunit [Nicotiana sylvestris] 60 7e-11
dbj|BAC77573.1| RNA polymerase beta' subunit [Nicotiana tomentos... 60 7e-11
>ref|YP_008964858.1| RNA polymerase beta' subunit (chloroplast) [Schwalbea americana]
gi|560176691|emb|CDJ38610.1| RNA polymerase beta'
subunit (chloroplast) [Schwalbea americana]
Length = 685
Score = 61.2 bits (147), Expect(3) = 2e-12
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +2
Query: 239 NKCSTKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
N +TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 28 NAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 2e-12
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 27.7 bits (60), Expect(3) = 2e-12
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQINA
Sbjct: 16 QLRIGLVSPQQINA 29
>ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum indicum]
gi|347448286|gb|AEO92697.1| RNA polymerase beta' subunit
(chloroplast) [Sesamum indicum]
Length = 691
Score = 60.1 bits (144), Expect(3) = 2e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 2e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana subsp. woodiana]
gi|334084650|emb|CBS29341.1| RNA polymerase beta' chain
[Olea woodiana subsp. woodiana]
Length = 690
Score = 60.1 bits (144), Expect(3) = 2e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 2e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea subsp. cuspidata]
gi|334084392|emb|CBR23820.1| RNA polymerase beta' chain
[Olea europaea subsp. cuspidata]
gi|334084941|emb|CBJ04289.1| RNA polymerase beta' chain
[Olea europaea subsp. cuspidata]
gi|334085027|emb|CBR23729.1| RNA polymerase beta' chain
[Olea europaea subsp. cuspidata]
Length = 690
Score = 60.1 bits (144), Expect(3) = 2e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 2e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea subsp. europaea]
gi|334701879|ref|YP_004564488.1| RNA polymerase beta'
chain [Olea europaea subsp. maroccana]
gi|328795424|emb|CBR30305.1| RNA polymerase beta' chain
[Olea europaea subsp. europaea]
gi|334084478|emb|CBR24611.1| RNA polymerase beta' chain
[Olea europaea subsp. europaea]
gi|334084564|emb|CBR30397.1| RNA polymerase beta' chain
[Olea europaea subsp. europaea]
gi|334084855|emb|CBS29228.1| RNA polymerase beta' chain
[Olea europaea subsp. maroccana]
gi|510934395|emb|CCQ09093.1| RNA polymerase beta' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 690
Score = 60.1 bits (144), Expect(3) = 2e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 2e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>gb|ADD31164.1| RNA polymerase beta' subunit protein (chloroplast) [Ehretia
acuminata]
Length = 687
Score = 60.1 bits (144), Expect(3) = 2e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 2e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>ref|YP_009002249.1| RNA polymerase beta' subunit (chloroplast) [Pinguicula ehlersiae]
gi|575882131|emb|CDL78805.1| RNA polymerase beta'
subunit (chloroplast) [Pinguicula ehlersiae]
Length = 687
Score = 60.1 bits (144), Expect(3) = 2e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 2e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum]
Length = 687
Score = 60.1 bits (144), Expect(3) = 2e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 2e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>ref|YP_009092058.1| RNA polymerase beta (chloroplast) [Spirodela polyrhiza]
gi|672374526|gb|AEK94333.2| RNA polymerase beta
(chloroplast) [Spirodela polyrhiza]
Length = 693
Score = 57.8 bits (138), Expect(3) = 2e-11
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+ KILPN E+ G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ANKILPNGEVVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 30.8 bits (68), Expect(3) = 2e-11
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF+SMID YKH +
Sbjct: 1 MNQNFYSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>ref|YP_009144618.1| RNA polymerase beta' subunit (chloroplast) [Scutellaria
baicalensis] gi|827345831|gb|AKJ77132.1| RNA polymerase
beta' subunit (chloroplast) [Scutellaria baicalensis]
Length = 691
Score = 60.1 bits (144), Expect(3) = 2e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.5 bits (62), Expect(3) = 2e-11
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MN NF+SMID YKH +
Sbjct: 1 MNPNFYSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>gb|AFV61805.1| RNA polymerase beta' subunit (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 691
Score = 60.1 bits (144), Expect(3) = 2e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.5 bits (62), Expect(3) = 2e-11
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MN NF+SMID YKH +
Sbjct: 1 MNPNFYSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>ref|YP_009110593.1| RNA polymerase beta' chain (chloroplast) [Hesperelaea palmeri]
gi|725798277|emb|CED79753.1| RNA polymerase beta' chain
(chloroplast) [Hesperelaea palmeri]
Length = 690
Score = 59.7 bits (143), Expect(3) = 2e-11
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCER+F
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERVF 68
Score = 28.9 bits (63), Expect(3) = 2e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 2e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>ref|YP_004940501.1| rpoC1 gene product (chloroplast) [Boea hygrometrica]
gi|340549398|gb|AEK53220.1| RNA polymerase beta
(chloroplast) [Boea hygrometrica]
Length = 691
Score = 61.2 bits (147), Expect(3) = 3e-11
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
STKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 STKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 26.9 bits (58), Expect(3) = 3e-11
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MN NF SMID YKH +
Sbjct: 1 MNHNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 3e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>gb|ADD31175.1| RNA polymerase beta' subunit protein (chloroplast) [Cornus florida]
Length = 688
Score = 57.8 bits (138), Expect(3) = 4e-11
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2
Query: 254 KILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
KILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 33 KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 4e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 26.9 bits (58), Expect(3) = 4e-11
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 207 QLRIGLIFPQQINAPLKSCL 266
QLRIGL+ PQQI+A K L
Sbjct: 16 QLRIGLVSPQQISAWAKKIL 35
>ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia australiana]
gi|341834230|gb|AEK94499.1| RNA polymerase beta [Wolffia
australiana]
Length = 690
Score = 57.8 bits (138), Expect(3) = 5e-11
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+ KILPN E+ G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ANKILPNGEVVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 30.8 bits (68), Expect(3) = 5e-11
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF+SMID YKH +
Sbjct: 1 MNQNFYSMIDRYKHQQLRI 19
Score = 24.6 bits (52), Expect(3) = 5e-11
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ P+QI+A
Sbjct: 16 QLRIGLVSPEQISA 29
>ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiella lingulata]
gi|341834146|gb|AEK94416.1| RNA polymerase beta
[Wolffiella lingulata]
Length = 690
Score = 57.8 bits (138), Expect(3) = 5e-11
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+ KILPN E+ G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ANKILPNGEVVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 30.8 bits (68), Expect(3) = 5e-11
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF+SMID YKH +
Sbjct: 1 MNQNFYSMIDRYKHQQLRI 19
Score = 24.6 bits (52), Expect(3) = 5e-11
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ P+QI+A
Sbjct: 16 QLRIGLVSPEQISA 29
>gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [Gossypium
raimondii]
Length = 370
Score = 55.8 bits (133), Expect(3) = 5e-11
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 254 KILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
KILPN E G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 251 KILPNGETVGEVTKPYTFHYKTNKPEKDGLFCERIF 286
Score = 32.7 bits (73), Expect(3) = 5e-11
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1
Query: 157 IGMNQNFFSMIDWYKHNSYEL 219
IGMNQNF SMID YKH +
Sbjct: 217 IGMNQNFSSMIDRYKHQQLRI 237
Score = 24.6 bits (52), Expect(3) = 5e-11
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 207 QLRIGLIFPQQINAPLKSCL 266
QLRIG + PQQI+A K L
Sbjct: 234 QLRIGSVSPQQISAWAKKIL 253
>gb|ADD31179.1| RNA polymerase beta' subunit protein (chloroplast) [Heuchera
sanguinea]
Length = 689
Score = 58.2 bits (139), Expect(3) = 6e-11
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+ KILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 28.9 bits (63), Expect(3) = 6e-11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MNQNF SMID YKH +
Sbjct: 1 MNQNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 6e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>dbj|BAC77550.1| RNA polymerase beta' subunit [Nicotiana sylvestris]
Length = 150
Score = 60.1 bits (144), Expect(3) = 7e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 26.9 bits (58), Expect(3) = 7e-11
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MN NF SMID YKH +
Sbjct: 1 MNNNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 7e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29
>dbj|BAC77573.1| RNA polymerase beta' subunit [Nicotiana tomentosiformis]
Length = 149
Score = 60.1 bits (144), Expect(3) = 7e-11
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 248 STKILPNEEIAGKVTRLNTFHYEINKPKENGLFCERIF 361
+TKILPN EI G+VT+ TFHY+ NKP+++GLFCERIF
Sbjct: 31 ATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIF 68
Score = 26.9 bits (58), Expect(3) = 7e-11
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 163 MNQNFFSMIDWYKHNSYEL 219
MN NF SMID YKH +
Sbjct: 1 MNNNFSSMIDRYKHQQLRI 19
Score = 25.8 bits (55), Expect(3) = 7e-11
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 207 QLRIGLIFPQQINA 248
QLRIGL+ PQQI+A
Sbjct: 16 QLRIGLVSPQQISA 29