BLASTX nr result
ID: Forsythia22_contig00028303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00028303
(784 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chl... 224 3e-78
ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chl... 212 4e-71
ref|XP_012841998.1| PREDICTED: RNA pseudouridine synthase 6, chl... 213 1e-70
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob... 214 5e-70
ref|XP_011037691.1| PREDICTED: RNA pseudouridine synthase 6, chl... 207 9e-70
ref|XP_012444881.1| PREDICTED: RNA pseudouridine synthase 6, chl... 213 1e-69
ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chl... 213 1e-69
gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium r... 213 1e-69
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun... 207 3e-69
emb|CDP04372.1| unnamed protein product [Coffea canephora] 216 5e-69
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl... 212 1e-68
ref|XP_009777366.1| PREDICTED: RNA pseudouridine synthase 6, chl... 211 3e-68
ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chl... 215 6e-68
ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chl... 217 8e-68
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr... 207 1e-67
gb|KHG01919.1| hypothetical protein F383_22898 [Gossypium arboreum] 210 1e-67
gb|KHG01920.1| hypothetical protein F383_22898 [Gossypium arboreum] 210 1e-67
ref|XP_004232727.2| PREDICTED: RNA pseudouridine synthase 6, chl... 214 2e-67
ref|XP_004293270.1| PREDICTED: RNA pseudouridine synthase 6, chl... 205 2e-67
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 205 4e-67
>ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Sesamum
indicum]
Length = 484
Score = 224 bits (570), Expect(2) = 3e-78
Identities = 104/120 (86%), Positives = 113/120 (94%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAVFYALVCPDPPP+A PEQIK +KE TDPSVLRKRASIKGKT+REAQKTF
Sbjct: 131 LFVADLIHFGAVFYALVCPDPPPSATPEQIKTFKEFTDPSVLRKRASIKGKTVREAQKTF 190
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RITR DEFVEAGTYLRVHVHPKRFPRCYEIDW+SRI++VTD YV+LDKPAGTSVGGTTDN
Sbjct: 191 RITRPDEFVEAGTYLRVHVHPKRFPRCYEIDWRSRIVAVTDDYVILDKPAGTSVGGTTDN 250
Score = 96.3 bits (238), Expect(2) = 3e-78
Identities = 58/123 (47%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = -3
Query: 731 MAAGATTAXXXXXXXXXXXXXXXXXSYRGNFIAPINLVRTLASTTL-FKNISSYQTFNNR 555
MA GATTA S+R NF INL RTLA+T FKNI + T
Sbjct: 3 MAIGATTALSSTLAGSVVSSLLSASSFRRNFFTHINLARTLAATNCRFKNIHKHHTLIAG 62
Query: 554 SRSFSCKXXXXXXXXXXXXXXXXXNGYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYI 375
R+ SC+ N YP Y RLLPCPS NGPPRVEHLVVS+GG VLEYI
Sbjct: 63 KRNLSCESTASADISTNSSIHISNNSYPPYGRLLPCPSQNGPPRVEHLVVSKGGPVLEYI 122
Query: 374 CQA 366
A
Sbjct: 123 SSA 125
>ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Prunus
mume]
Length = 469
Score = 212 bits (540), Expect(2) = 4e-71
Identities = 98/119 (82%), Positives = 112/119 (94%)
Frame = -1
Query: 358 FLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTFR 179
F+ LIHFGAV+YALVCP PPP A PEQ++V+KEVT+PSVL+KRASIKGKT+REAQKTFR
Sbjct: 115 FVADLIHFGAVYYALVCPKPPPTATPEQMRVFKEVTEPSVLKKRASIKGKTVREAQKTFR 174
Query: 178 ITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
IT+ DEFVEAGTYLRVHVHPKRFPRCYEIDWKSRII+V++ +VVLDKPAGT+VGGTTDN
Sbjct: 175 ITQADEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDN 233
Score = 84.3 bits (207), Expect(2) = 4e-71
Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Frame = -3
Query: 644 NFIAPINLVRTLAST--TLFKNISSYQ-----TFNNRSR---SFSCKXXXXXXXXXXXXX 495
+F AP+ LVRTLA T L ++ ++Y+ F+ S+ +F+CK
Sbjct: 8 SFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTFACKSLKQDVTQPTAVS 67
Query: 494 XXXXNGYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQ 369
GYP Y+RLLPCPSHNGPPRVEHLVVSEGG VLEYIC+
Sbjct: 68 SVN--GYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICK 107
>ref|XP_012841998.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Erythranthe
guttatus] gi|604328238|gb|EYU33906.1| hypothetical
protein MIMGU_mgv1a005451mg [Erythranthe guttata]
Length = 483
Score = 213 bits (541), Expect(2) = 1e-70
Identities = 99/119 (83%), Positives = 108/119 (90%)
Frame = -1
Query: 358 FLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTFR 179
F+ LIHFGAVFYALVCPDPPP A PEQI +KE TDPS+LRKR+SIKGKT REAQKTFR
Sbjct: 129 FVADLIHFGAVFYALVCPDPPPTATPEQINFFKEYTDPSLLRKRSSIKGKTFREAQKTFR 188
Query: 178 ITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
I+RTDEFVE GTYLRVHVHPKRFPRCYE DW+SR+I+V +SYVVLDKPAGTSVGGTTDN
Sbjct: 189 ISRTDEFVETGTYLRVHVHPKRFPRCYETDWRSRVIAVAESYVVLDKPAGTSVGGTTDN 247
Score = 82.4 bits (202), Expect(2) = 1e-70
Identities = 47/97 (48%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Frame = -3
Query: 650 RGNFIAPINLVRTLAST-TLFKNISSYQTFNNRSRSFSCKXXXXXXXXXXXXXXXXXNG- 477
R NF PINL RTLAST + F++I + N R+ SC+ N
Sbjct: 26 RRNFFIPINLARTLASTQSSFRHIHKHHICNAAHRNRSCESTASAYVSTDSSISTSNNNS 85
Query: 476 YPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
YP Y RLLPCPS NGPPRVEH VV+EGG VL+YI ++
Sbjct: 86 YPPYGRLLPCPSQNGPPRVEHFVVTEGGPVLDYISKS 122
>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
gi|508781387|gb|EOY28643.1| Pseudouridine synthase
family protein [Theobroma cacao]
Length = 491
Score = 214 bits (546), Expect(2) = 5e-70
Identities = 100/120 (83%), Positives = 111/120 (92%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP PPP+A PEQI+++KEVT PSVL KR SI+GKT+REAQKTF
Sbjct: 135 MFVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTF 194
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT D+FVEAGTYLRVHVHPKRFPRCYEIDWKSRII+VTDSYVVLDKPAGTSVGGTTDN
Sbjct: 195 RITHVDQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDN 254
Score = 78.2 bits (191), Expect(2) = 5e-70
Identities = 47/111 (42%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Frame = -3
Query: 635 APINLVRTLAST---------TLFKNISSYQTFNNRSRSFSC------------KXXXXX 519
AP++L+RTLAST K + S+ + R SC
Sbjct: 19 APMSLLRTLASTGASLYKLNKNYSKTVLSWSCLGSSRRELSCLSTKMDAAQTASATSVNG 78
Query: 518 XXXXXXXXXXXXNGYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
YP Y RLLPCPSHNGPPRVEHLVVSEGG VLEYIC+A
Sbjct: 79 VLLYFMIEIHFLFSYPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKA 129
>ref|XP_011037691.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Populus
euphratica]
Length = 467
Score = 207 bits (527), Expect(2) = 9e-70
Identities = 97/120 (80%), Positives = 109/120 (90%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV YALVCP PPP A PEQI+V++EVT PSVL+KRASIKGKT+REAQKTF
Sbjct: 113 LFVADLIHFGAVHYALVCPQPPPTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTF 172
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT D+F+EAG YLRVHVHPKRFPRCY+IDWKSRII VT+S+VVLDKPAGTSVGGTTDN
Sbjct: 173 RITHVDQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDN 232
Score = 84.7 bits (208), Expect(2) = 9e-70
Identities = 48/97 (49%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = -3
Query: 653 YRGNFIAPINLVRTLASTTLFK-NISSYQTFNNRSRSFSCKXXXXXXXXXXXXXXXXXNG 477
YRG F AP+ L+RTLAST + N + + R FSC+ G
Sbjct: 14 YRG-FSAPVTLLRTLASTRAYSLNKKALVWCSLSKRKFSCESLKQDIASTTATSSVN--G 70
Query: 476 YPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
YP Y+RLLPCPSHN PPR+EHLVVSE G VL+YIC+A
Sbjct: 71 YPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKA 107
>ref|XP_012444881.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Gossypium raimondii] gi|823224229|ref|XP_012444882.1|
PREDICTED: RNA pseudouridine synthase 6, chloroplastic
isoform X1 [Gossypium raimondii]
gi|823224231|ref|XP_012444883.1| PREDICTED: RNA
pseudouridine synthase 6, chloroplastic isoform X1
[Gossypium raimondii]
Length = 488
Score = 213 bits (542), Expect(2) = 1e-69
Identities = 99/120 (82%), Positives = 111/120 (92%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP PPP+A PEQI+++KEVT PSVL KR SIKGKT+REAQKTF
Sbjct: 121 LFVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTF 180
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT ++FVEAGTYLRVHVHPKRFPRCYEIDWKSRII+VTDSYVVLDKPAGTSVGGT+DN
Sbjct: 181 RITHVEQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDN 240
Score = 78.2 bits (191), Expect(2) = 1e-69
Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Frame = -3
Query: 635 APINLVRTLASTTLFKNISSYQTFNNRSRSFSCKXXXXXXXXXXXXXXXXXN-------G 477
AP++ RTLAS++L+K+ N++S FSC G
Sbjct: 23 APVSSWRTLASSSLYKHYKR----NSKSAVFSCLSSSKIELSCLSSKVDVAQTTTTSVNG 78
Query: 476 YPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
Y Y RLLPCPS NGPPRVEHLVVSEGG VLEYIC++
Sbjct: 79 YHKYDRLLPCPSENGPPRVEHLVVSEGGPVLEYICKS 115
>ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X2
[Gossypium raimondii]
Length = 477
Score = 213 bits (542), Expect(2) = 1e-69
Identities = 99/120 (82%), Positives = 111/120 (92%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP PPP+A PEQI+++KEVT PSVL KR SIKGKT+REAQKTF
Sbjct: 121 LFVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTF 180
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT ++FVEAGTYLRVHVHPKRFPRCYEIDWKSRII+VTDSYVVLDKPAGTSVGGT+DN
Sbjct: 181 RITHVEQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDN 240
Score = 78.2 bits (191), Expect(2) = 1e-69
Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Frame = -3
Query: 635 APINLVRTLASTTLFKNISSYQTFNNRSRSFSCKXXXXXXXXXXXXXXXXXN-------G 477
AP++ RTLAS++L+K+ N++S FSC G
Sbjct: 23 APVSSWRTLASSSLYKHYKR----NSKSAVFSCLSSSKIELSCLSSKVDVAQTTTTSVNG 78
Query: 476 YPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
Y Y RLLPCPS NGPPRVEHLVVSEGG VLEYIC++
Sbjct: 79 YHKYDRLLPCPSENGPPRVEHLVVSEGGPVLEYICKS 115
>gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium raimondii]
gi|763790717|gb|KJB57713.1| hypothetical protein
B456_009G176900 [Gossypium raimondii]
Length = 475
Score = 213 bits (542), Expect(2) = 1e-69
Identities = 99/120 (82%), Positives = 111/120 (92%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP PPP+A PEQI+++KEVT PSVL KR SIKGKT+REAQKTF
Sbjct: 119 LFVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTF 178
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT ++FVEAGTYLRVHVHPKRFPRCYEIDWKSRII+VTDSYVVLDKPAGTSVGGT+DN
Sbjct: 179 RITHVEQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDN 238
Score = 78.2 bits (191), Expect(2) = 1e-69
Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Frame = -3
Query: 635 APINLVRTLASTTLFKNISSYQTFNNRSRSFSCKXXXXXXXXXXXXXXXXXN-------G 477
AP++ RTLAS++L+K+ N++S FSC G
Sbjct: 21 APVSSWRTLASSSLYKHYKR----NSKSAVFSCLSSSKIELSCLSSKVDVAQTTTTSVNG 76
Query: 476 YPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
Y Y RLLPCPS NGPPRVEHLVVSEGG VLEYIC++
Sbjct: 77 YHKYDRLLPCPSENGPPRVEHLVVSEGGPVLEYICKS 113
>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
gi|462409392|gb|EMJ14726.1| hypothetical protein
PRUPE_ppa020640mg [Prunus persica]
Length = 477
Score = 207 bits (527), Expect(2) = 3e-69
Identities = 96/119 (80%), Positives = 109/119 (91%)
Frame = -1
Query: 358 FLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTFR 179
F+ LIHFGAV+YALVCP PPP A PEQ++V+KEVT PSVL+ RASIKGKT+REAQKTFR
Sbjct: 123 FVADLIHFGAVYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFR 182
Query: 178 ITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
IT DEFVEAGTYLRVHVHPKRFPRCY+IDWKSRII+V++ +VVLDKPAGT+VGGTTDN
Sbjct: 183 ITHADEFVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDN 241
Score = 82.8 bits (203), Expect(2) = 3e-69
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Frame = -3
Query: 644 NFIAPINLVRTLAST--TLFKNISSYQ-----TFNNRSR---SFSCKXXXXXXXXXXXXX 495
+F AP+ LVRTLA T L ++ ++Y+ F+ S+ +F+C+
Sbjct: 16 SFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTFACESLKQGVTQPTSVS 75
Query: 494 XXXXNGYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQ 369
GYP Y+RLLPCPSHNGPPRVEHLVVSEGG VLEYIC+
Sbjct: 76 SVN--GYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICK 115
>emb|CDP04372.1| unnamed protein product [Coffea canephora]
Length = 486
Score = 216 bits (550), Expect(2) = 5e-69
Identities = 99/120 (82%), Positives = 112/120 (93%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP PPP+A PEQIK YKEVT PSVL+ RASIKGKT+REAQKT+
Sbjct: 133 LFVADLIHFGAVYYALVCPKPPPSATPEQIKTYKEVTAPSVLKNRASIKGKTVREAQKTY 192
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RITR DEFVEAGTYLRVHVHPKRFPRCYEIDW+SRI+++T+SYV+LDKPAGTSVGGTTDN
Sbjct: 193 RITRADEFVEAGTYLRVHVHPKRFPRCYEIDWRSRIVAITESYVILDKPAGTSVGGTTDN 252
Score = 73.2 bits (178), Expect(2) = 5e-69
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Frame = -3
Query: 653 YRGNFIAPINLVRTLAS----TTLFKNISSYQTFNNRSRS----FSCKXXXXXXXXXXXX 498
YR ++P+ LV LAS T ++ S++ T+++R+RS FSC+
Sbjct: 25 YRRTLLSPVRLVCRLASNHFWTENYQKNSNFITWDSRARSRYRSFSCQSTASSNVDSTPD 84
Query: 497 XXXXXNGYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYI 375
G+ Y RLLPCPS NGPPRVEHLVV EGG VL+YI
Sbjct: 85 SVSSN-GFRRYGRLLPCPSENGPPRVEHLVVKEGGPVLDYI 124
>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 483
Score = 212 bits (540), Expect(2) = 1e-68
Identities = 99/115 (86%), Positives = 107/115 (93%)
Frame = -1
Query: 346 LIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTFRITRT 167
LI FGAV+YALVCP PPP A PEQIKVY+EVTDPS+LR+R SIKGKT+REAQKTF+ITR
Sbjct: 135 LIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRA 194
Query: 166 DEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
DE VEAGTYLRVHVHPKRFPRCY+IDWKSRII+VTD YVVLDKPAGTSVGGTTDN
Sbjct: 195 DEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDN 249
Score = 75.9 bits (185), Expect(2) = 1e-68
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = -3
Query: 653 YRGNFIAPINLVRTLASTT--LFKNISSYQ--TFNNRSRSFSCKXXXXXXXXXXXXXXXX 486
+R F +P N+V T AST L KN + Y+ ++ SRSFSC+
Sbjct: 26 WRNGFFSPFNMVHTFASTRSRLLKNKNHYKRLALSSCSRSFSCQSTALSDISSTSHTVSS 85
Query: 485 XNGYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
G+ Y RL+PCP N PPRVEHLVV++ G VLEYIC+A
Sbjct: 86 N-GHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVLEYICKA 124
>ref|XP_009777366.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Nicotiana
sylvestris]
Length = 483
Score = 211 bits (538), Expect(2) = 3e-68
Identities = 100/115 (86%), Positives = 105/115 (91%)
Frame = -1
Query: 346 LIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTFRITRT 167
LI FGAV+YALVCP PPP A EQIKVY+EVTDPSVLRKR SIKGKT+REAQKTFRITR
Sbjct: 135 LIQFGAVYYALVCPKPPPTATAEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRA 194
Query: 166 DEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
DE VE GTYLRVHVHPKRFPRCYEIDWKSRII+VTD YV+LDKPAGTSVGGTTDN
Sbjct: 195 DEIVETGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDDYVILDKPAGTSVGGTTDN 249
Score = 75.5 bits (184), Expect(2) = 3e-68
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Frame = -3
Query: 653 YRGNFIAPINLVRTLASTT--LFKNISSYQ--TFNNRSRSFSCKXXXXXXXXXXXXXXXX 486
+R F++P+ L+ TLAS+ L KN + YQ F++ SR FSC+
Sbjct: 26 WRNGFVSPVTLLHTLASSRSRLLKNKNQYQDLVFSSCSRGFSCQSTALSDVNSPSHTVSS 85
Query: 485 XNGYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
G+ +Y RLLPCP N PPRVEHLVV++ G VL+YI +A
Sbjct: 86 N-GHLMYGRLLPCPLQNSPPRVEHLVVTKEGPVLDYISKA 124
>ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Vitis
vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
product [Vitis vinifera]
Length = 472
Score = 215 bits (547), Expect(2) = 6e-68
Identities = 101/120 (84%), Positives = 113/120 (94%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP+PPP+A PEQ++++KEVT PSVLRKR SIKGKTIREAQKTF
Sbjct: 119 LFVADLIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTF 178
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT +EFVEAGTYLRVHVHPKRFPRCYEIDWKSRII+VT+SYVVLDKPAGTSVGGTTDN
Sbjct: 179 RITDVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDN 238
Score = 70.9 bits (172), Expect(2) = 6e-68
Identities = 40/93 (43%), Positives = 52/93 (55%)
Frame = -3
Query: 644 NFIAPINLVRTLASTTLFKNISSYQTFNNRSRSFSCKXXXXXXXXXXXXXXXXXNGYPIY 465
+F P+ L RTLAS+ +F + + + + + + GYP Y
Sbjct: 25 SFGTPVALARTLASSNVFSRRHKRVVWCSNNPTCTRELTASSDSANTSSVN----GYPEY 80
Query: 464 SRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
RLLPCPS NGPPRVEHLVVSEGG VL+YI +A
Sbjct: 81 HRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKA 113
>ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Nelumbo
nucifera]
Length = 484
Score = 217 bits (552), Expect(2) = 8e-68
Identities = 102/120 (85%), Positives = 113/120 (94%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP+PPPNAMPEQI+VYKEVT PSVL+ R SIKGKTIREAQKTF
Sbjct: 131 LFVADLIHFGAVYYALVCPEPPPNAMPEQIRVYKEVTAPSVLKNRLSIKGKTIREAQKTF 190
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT +EFVEAGTYLRVHVHPKRFPRCYEIDW+SRII+VT+SYVVLDKPAGTSVGGT+DN
Sbjct: 191 RITHINEFVEAGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTSDN 250
Score = 68.6 bits (166), Expect(2) = 8e-68
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -3
Query: 479 GYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
GYP Y+RLLPCP NGPPR+EHLVVSEGG VLEYI +A
Sbjct: 88 GYPEYTRLLPCPLQNGPPRIEHLVVSEGGPVLEYISKA 125
>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551677|gb|ESR62306.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 487
Score = 207 bits (527), Expect(2) = 1e-67
Identities = 97/120 (80%), Positives = 110/120 (91%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP PP A PEQ++V+KEVTDPSVL KR+SIKGKT+REAQKTF
Sbjct: 125 LFVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTF 184
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT D+ VEAGTYLRVHVHPKRFPRCY+IDWKSRII+VT+S+VVLDKPAGTSVGGTTDN
Sbjct: 185 RITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDN 244
Score = 77.8 bits (190), Expect(2) = 1e-67
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Frame = -3
Query: 635 APINLVRTLASTTLFKNISSYQT-----FNNRSRSFSCKXXXXXXXXXXXXXXXXXN--- 480
AP++L+RTLAST + + Y++ F++ +R+F C+
Sbjct: 19 APVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTTATAAAATP 78
Query: 479 ---GYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQ 369
GYP Y RLLPCPS N PPRVEHLVVSEGG VLEYIC+
Sbjct: 79 SSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICR 118
>gb|KHG01919.1| hypothetical protein F383_22898 [Gossypium arboreum]
Length = 520
Score = 210 bits (535), Expect(2) = 1e-67
Identities = 98/120 (81%), Positives = 110/120 (91%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP PPP+A PEQI+++KEVT PSVL KR SIKGKT+REAQKTF
Sbjct: 119 LFVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTF 178
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT ++FVEAGTYLRVHVHPKRFPRCYEIDWKSRII+V DSYVVLDKPAGTSVGGT+DN
Sbjct: 179 RITHFEQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTSDN 238
Score = 74.3 bits (181), Expect(2) = 1e-67
Identities = 43/97 (44%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Frame = -3
Query: 635 APINLVRTLASTTLFKNISSYQTFNNRSRSFSCKXXXXXXXXXXXXXXXXXN-------G 477
AP++ RTLAS++L+K+ N++ SC G
Sbjct: 21 APVSSWRTLASSSLYKHYKR----NSKGAVLSCLSSSKIELACLSSEVDVAQTTTSSVNG 76
Query: 476 YPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
Y Y RLLPCPS NGPPRVEHLVVSEGG VLEYIC++
Sbjct: 77 YHKYDRLLPCPSENGPPRVEHLVVSEGGPVLEYICKS 113
>gb|KHG01920.1| hypothetical protein F383_22898 [Gossypium arboreum]
Length = 475
Score = 210 bits (535), Expect(2) = 1e-67
Identities = 98/120 (81%), Positives = 110/120 (91%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP PPP+A PEQI+++KEVT PSVL KR SIKGKT+REAQKTF
Sbjct: 119 LFVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTF 178
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT ++FVEAGTYLRVHVHPKRFPRCYEIDWKSRII+V DSYVVLDKPAGTSVGGT+DN
Sbjct: 179 RITHFEQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTSDN 238
Score = 74.3 bits (181), Expect(2) = 1e-67
Identities = 43/97 (44%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Frame = -3
Query: 635 APINLVRTLASTTLFKNISSYQTFNNRSRSFSCKXXXXXXXXXXXXXXXXXN-------G 477
AP++ RTLAS++L+K+ N++ SC G
Sbjct: 21 APVSSWRTLASSSLYKHYKR----NSKGAVLSCLSSSKIELACLSSEVDVAQTTTSSVNG 76
Query: 476 YPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
Y Y RLLPCPS NGPPRVEHLVVSEGG VLEYIC++
Sbjct: 77 YHKYDRLLPCPSENGPPRVEHLVVSEGGPVLEYICKS 113
>ref|XP_004232727.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Solanum
lycopersicum] gi|723673958|ref|XP_010316608.1|
PREDICTED: RNA pseudouridine synthase 6, chloroplastic
[Solanum lycopersicum] gi|723673961|ref|XP_010316609.1|
PREDICTED: RNA pseudouridine synthase 6, chloroplastic
[Solanum lycopersicum] gi|723673964|ref|XP_010316610.1|
PREDICTED: RNA pseudouridine synthase 6, chloroplastic
[Solanum lycopersicum]
Length = 483
Score = 214 bits (545), Expect(2) = 2e-67
Identities = 101/115 (87%), Positives = 107/115 (93%)
Frame = -1
Query: 346 LIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTFRITRT 167
LI FGAV+YALVCP PPP A PEQIKVY+EVTDPSVLRKR SIKGKT+REAQKTF+ITR
Sbjct: 135 LIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRA 194
Query: 166 DEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
DE VEAGTYLRVHVHPKRFPRCY+IDWKSRII+VTD YVVLDKPAGTSVGGTTDN
Sbjct: 195 DEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDN 249
Score = 70.1 bits (170), Expect(2) = 2e-67
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Frame = -3
Query: 653 YRGNFIAPINLVRTLASTT--LFKNISSYQ--TFNNRSRSFSCKXXXXXXXXXXXXXXXX 486
+R F +P N+V T AS+ L KN + Y+ ++ S+SF C+
Sbjct: 26 WRNGFFSPFNMVHTFASSRSRLLKNKNHYKRLALSSCSKSFCCQSTALSDINSTSHTVSS 85
Query: 485 XNGYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQA 366
G+ Y RL+PCP N PPRVEHLVV++ G V+EYIC+A
Sbjct: 86 N-GHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVVEYICKA 124
>ref|XP_004293270.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Fragaria
vesca subsp. vesca] gi|764549508|ref|XP_011459966.1|
PREDICTED: RNA pseudouridine synthase 6, chloroplastic
[Fragaria vesca subsp. vesca]
gi|764549517|ref|XP_011459967.1| PREDICTED: RNA
pseudouridine synthase 6, chloroplastic [Fragaria vesca
subsp. vesca]
Length = 477
Score = 205 bits (521), Expect(2) = 2e-67
Identities = 94/119 (78%), Positives = 108/119 (90%)
Frame = -1
Query: 358 FLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTFR 179
F+ LIHFGAV+YALVCP PPP A PEQ++VYKEVT PSVL+KR SIKGKT+REAQKTFR
Sbjct: 123 FVADLIHFGAVYYALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFR 182
Query: 178 ITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
IT D++VE GTYLRVHVHPKRFPRCY+IDWKSR+I+VT+ +VVLDKPAGT+VGGTTDN
Sbjct: 183 ITHADQYVEDGTYLRVHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDN 241
Score = 79.0 bits (193), Expect(2) = 2e-67
Identities = 48/103 (46%), Positives = 59/103 (57%), Gaps = 11/103 (10%)
Frame = -3
Query: 644 NFIAPINLVRTLASTT--LFKNISSYQ---------TFNNRSRSFSCKXXXXXXXXXXXX 498
+FIAP+ LVRTLA T L + + SYQ +++ +C+
Sbjct: 16 SFIAPVGLVRTLALTHVGLSEQLRSYQHVKVAWFSKKLKKKNKRVACESLKEEVTYPTAA 75
Query: 497 XXXXXNGYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQ 369
GYP Y+RLLPCPS NGPPRVEHLVVSEGG VLEYIC+
Sbjct: 76 SSVY--GYP-YTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICK 115
>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 487
Score = 205 bits (522), Expect(2) = 4e-67
Identities = 96/120 (80%), Positives = 109/120 (90%)
Frame = -1
Query: 361 IFLLYLIHFGAVFYALVCPDPPPNAMPEQIKVYKEVTDPSVLRKRASIKGKTIREAQKTF 182
+F+ LIHFGAV+YALVCP PP A PEQ++V+KEVTDPSVL KR+SIKGKT+REAQKTF
Sbjct: 125 LFVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTF 184
Query: 181 RITRTDEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIISVTDSYVVLDKPAGTSVGGTTDN 2
RIT D+ VEAGTYLRVHVHPKRFPRCY+IDW SRII+VT+S+VVLDKPAGTSVGGTTDN
Sbjct: 185 RITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDN 244
Score = 77.8 bits (190), Expect(2) = 4e-67
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Frame = -3
Query: 635 APINLVRTLASTTLFKNISSYQT-----FNNRSRSFSCKXXXXXXXXXXXXXXXXXN--- 480
AP++L+RTLAST + + Y++ F++ +R+F C+
Sbjct: 19 APVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTAAIAAATTP 78
Query: 479 ---GYPIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQ 369
GYP Y RLLPCPS N PPRVEHLVVSEGG VLEYIC+
Sbjct: 79 SSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICR 118