BLASTX nr result
ID: Forsythia22_contig00028156
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00028156
(1074 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007048331.1| Zinc finger C-x8-C-x5-C-x3-H type family pro... 39 1e-07
ref|XP_007048330.1| Zinc finger C-x8-C-x5-C-x3-H type family pro... 39 1e-07
ref|XP_012470253.1| PREDICTED: zinc finger CCCH domain-containin... 41 3e-07
ref|XP_012470261.1| PREDICTED: zinc finger CCCH domain-containin... 41 3e-07
ref|XP_012470263.1| PREDICTED: zinc finger CCCH domain-containin... 41 3e-07
ref|XP_012470264.1| PREDICTED: zinc finger CCCH domain-containin... 41 3e-07
gb|KJB18743.1| hypothetical protein B456_003G068000 [Gossypium r... 41 3e-07
gb|KJB18751.1| hypothetical protein B456_003G068000 [Gossypium r... 41 3e-07
ref|XP_010465975.1| PREDICTED: zinc finger CCCH domain-containin... 37 1e-06
ref|XP_012478323.1| PREDICTED: zinc finger CCCH domain-containin... 39 1e-06
gb|KJB29889.1| hypothetical protein B456_005G122500 [Gossypium r... 39 1e-06
ref|XP_010507053.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 37 2e-06
>ref|XP_007048331.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 2
[Theobroma cacao] gi|508700592|gb|EOX92488.1| Zinc finger
C-x8-C-x5-C-x3-H type family protein, putative isoform 2
[Theobroma cacao]
Length = 967
Score = 39.3 bits (90), Expect(3) = 1e-07
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I KDA+K I KK+V+K+ +++ ++ P+
Sbjct: 903 PTWKEGQIGKDAYKNIVKKVVDKVTATMQGANIPQ 937
Score = 37.4 bits (85), Expect(3) = 1e-07
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +1
Query: 34 LASSFLGKQTGGLPN-----ESKKSIDVRTQELVKKTYGSKKGNDGKGLLDFKFALDELV 198
+ASS + K+ G+ E K+ + +T KK DGKG+ FKFAL E V
Sbjct: 838 VASSEVTKENEGVEETKKAQEENKNGPSENVDADDRTDEGKKSKDGKGIRAFKFALVEFV 897
Query: 199 KDLSK 213
KDL K
Sbjct: 898 KDLLK 902
Score = 26.9 bits (58), Expect(3) = 1e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK+SK VQ
Sbjct: 940 EKIDQYLSFSKPKLSKLVQ 958
>ref|XP_007048330.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
1 [Theobroma cacao] gi|508700591|gb|EOX92487.1| Zinc
finger C-x8-C-x5-C-x3-H type family protein, putative
isoform 1 [Theobroma cacao]
Length = 946
Score = 39.3 bits (90), Expect(3) = 1e-07
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I KDA+K I KK+V+K+ +++ ++ P+
Sbjct: 882 PTWKEGQIGKDAYKNIVKKVVDKVTATMQGANIPQ 916
Score = 37.4 bits (85), Expect(3) = 1e-07
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +1
Query: 34 LASSFLGKQTGGLPN-----ESKKSIDVRTQELVKKTYGSKKGNDGKGLLDFKFALDELV 198
+ASS + K+ G+ E K+ + +T KK DGKG+ FKFAL E V
Sbjct: 817 VASSEVTKENEGVEETKKAQEENKNGPSENVDADDRTDEGKKSKDGKGIRAFKFALVEFV 876
Query: 199 KDLSK 213
KDL K
Sbjct: 877 KDLLK 881
Score = 26.9 bits (58), Expect(3) = 1e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK+SK VQ
Sbjct: 919 EKIDQYLSFSKPKLSKLVQ 937
>ref|XP_012470253.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like isoform
X1 [Gossypium raimondii] gi|823140859|ref|XP_012470254.1|
PREDICTED: zinc finger CCCH domain-containing protein
38-like isoform X1 [Gossypium raimondii]
gi|823140861|ref|XP_012470255.1| PREDICTED: zinc finger
CCCH domain-containing protein 38-like isoform X1
[Gossypium raimondii] gi|823140863|ref|XP_012470256.1|
PREDICTED: zinc finger CCCH domain-containing protein
38-like isoform X1 [Gossypium raimondii]
gi|823140865|ref|XP_012470257.1| PREDICTED: zinc finger
CCCH domain-containing protein 38-like isoform X1
[Gossypium raimondii] gi|823140867|ref|XP_012470258.1|
PREDICTED: zinc finger CCCH domain-containing protein
38-like isoform X1 [Gossypium raimondii]
gi|823140869|ref|XP_012470259.1| PREDICTED: zinc finger
CCCH domain-containing protein 38-like isoform X1
[Gossypium raimondii] gi|823140871|ref|XP_012470260.1|
PREDICTED: zinc finger CCCH domain-containing protein
38-like isoform X1 [Gossypium raimondii]
Length = 976
Score = 40.8 bits (94), Expect(3) = 3e-07
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I K+A+K I KK+V+K+I +V+ ++ P+
Sbjct: 912 PTWKEGQIGKEAYKNIVKKVVDKVIATVQGTNIPQ 946
Score = 34.7 bits (78), Expect(3) = 3e-07
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +1
Query: 124 KTYGSKKGNDGKGLLDFKFALDELVKDLSK 213
KT +KK D KG+ FKFAL E VKDL K
Sbjct: 882 KTDEAKKNKDTKGIRAFKFALVEFVKDLLK 911
Score = 26.9 bits (58), Expect(3) = 3e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK+SK VQ
Sbjct: 949 EKIDQYLSFSKPKLSKLVQ 967
>ref|XP_012470261.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like isoform
X2 [Gossypium raimondii] gi|823140875|ref|XP_012470262.1|
PREDICTED: zinc finger CCCH domain-containing protein
38-like isoform X2 [Gossypium raimondii]
gi|763751354|gb|KJB18742.1| hypothetical protein
B456_003G068000 [Gossypium raimondii]
gi|763751357|gb|KJB18745.1| hypothetical protein
B456_003G068000 [Gossypium raimondii]
gi|763751358|gb|KJB18746.1| hypothetical protein
B456_003G068000 [Gossypium raimondii]
gi|763751359|gb|KJB18747.1| hypothetical protein
B456_003G068000 [Gossypium raimondii]
gi|763751361|gb|KJB18749.1| hypothetical protein
B456_003G068000 [Gossypium raimondii]
gi|763751362|gb|KJB18750.1| hypothetical protein
B456_003G068000 [Gossypium raimondii]
Length = 972
Score = 40.8 bits (94), Expect(3) = 3e-07
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I K+A+K I KK+V+K+I +V+ ++ P+
Sbjct: 908 PTWKEGQIGKEAYKNIVKKVVDKVIATVQGTNIPQ 942
Score = 34.7 bits (78), Expect(3) = 3e-07
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +1
Query: 124 KTYGSKKGNDGKGLLDFKFALDELVKDLSK 213
KT +KK D KG+ FKFAL E VKDL K
Sbjct: 878 KTDEAKKNKDTKGIRAFKFALVEFVKDLLK 907
Score = 26.9 bits (58), Expect(3) = 3e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK+SK VQ
Sbjct: 945 EKIDQYLSFSKPKLSKLVQ 963
>ref|XP_012470263.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like isoform
X3 [Gossypium raimondii]
Length = 970
Score = 40.8 bits (94), Expect(3) = 3e-07
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I K+A+K I KK+V+K+I +V+ ++ P+
Sbjct: 906 PTWKEGQIGKEAYKNIVKKVVDKVIATVQGTNIPQ 940
Score = 34.7 bits (78), Expect(3) = 3e-07
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +1
Query: 124 KTYGSKKGNDGKGLLDFKFALDELVKDLSK 213
KT +KK D KG+ FKFAL E VKDL K
Sbjct: 876 KTDEAKKNKDTKGIRAFKFALVEFVKDLLK 905
Score = 26.9 bits (58), Expect(3) = 3e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK+SK VQ
Sbjct: 943 EKIDQYLSFSKPKLSKLVQ 961
>ref|XP_012470264.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
isoform X4 [Gossypium raimondii]
Length = 936
Score = 40.8 bits (94), Expect(3) = 3e-07
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I K+A+K I KK+V+K+I +V+ ++ P+
Sbjct: 872 PTWKEGQIGKEAYKNIVKKVVDKVIATVQGTNIPQ 906
Score = 34.7 bits (78), Expect(3) = 3e-07
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +1
Query: 124 KTYGSKKGNDGKGLLDFKFALDELVKDLSK 213
KT +KK D KG+ FKFAL E VKDL K
Sbjct: 842 KTDEAKKNKDTKGIRAFKFALVEFVKDLLK 871
Score = 26.9 bits (58), Expect(3) = 3e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK+SK VQ
Sbjct: 909 EKIDQYLSFSKPKLSKLVQ 927
>gb|KJB18743.1| hypothetical protein B456_003G068000 [Gossypium raimondii]
gi|763751356|gb|KJB18744.1| hypothetical protein
B456_003G068000 [Gossypium raimondii]
gi|763751360|gb|KJB18748.1| hypothetical protein
B456_003G068000 [Gossypium raimondii]
Length = 932
Score = 40.8 bits (94), Expect(3) = 3e-07
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I K+A+K I KK+V+K+I +V+ ++ P+
Sbjct: 868 PTWKEGQIGKEAYKNIVKKVVDKVIATVQGTNIPQ 902
Score = 34.7 bits (78), Expect(3) = 3e-07
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +1
Query: 124 KTYGSKKGNDGKGLLDFKFALDELVKDLSK 213
KT +KK D KG+ FKFAL E VKDL K
Sbjct: 838 KTDEAKKNKDTKGIRAFKFALVEFVKDLLK 867
Score = 26.9 bits (58), Expect(3) = 3e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK+SK VQ
Sbjct: 905 EKIDQYLSFSKPKLSKLVQ 923
>gb|KJB18751.1| hypothetical protein B456_003G068000 [Gossypium raimondii]
Length = 789
Score = 40.8 bits (94), Expect(3) = 3e-07
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I K+A+K I KK+V+K+I +V+ ++ P+
Sbjct: 725 PTWKEGQIGKEAYKNIVKKVVDKVIATVQGTNIPQ 759
Score = 34.7 bits (78), Expect(3) = 3e-07
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +1
Query: 124 KTYGSKKGNDGKGLLDFKFALDELVKDLSK 213
KT +KK D KG+ FKFAL E VKDL K
Sbjct: 695 KTDEAKKNKDTKGIRAFKFALVEFVKDLLK 724
Score = 26.9 bits (58), Expect(3) = 3e-07
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK+SK VQ
Sbjct: 762 EKIDQYLSFSKPKLSKLVQ 780
>ref|XP_010465975.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
[Camelina sativa]
Length = 682
Score = 37.4 bits (85), Expect(3) = 1e-06
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EGK+ KD +K I KK+V K+ ++++ + P+
Sbjct: 618 PAWKEGKMDKDVYKNIVKKVVEKVTVTMQSGNVPQ 652
Score = 36.6 bits (83), Expect(3) = 1e-06
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = +1
Query: 52 GKQTGGLPNESKKSIDVRTQELVKKTYGS----KKGNDGKGLLDFKFALDELVKDLSK 213
GK+TG N+++ +D +++ GS KKG D K +L FKFAL E+VK+L K
Sbjct: 563 GKKTGEDTNDAENIVD---EDVNDDGEGSDEENKKGKDPKEMLAFKFALVEVVKELLK 617
Score = 26.6 bits (57), Expect(3) = 1e-06
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK++K VQ
Sbjct: 655 EKIDQYLSASKPKLTKLVQ 673
>ref|XP_012478323.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
[Gossypium raimondii] gi|763762636|gb|KJB29890.1|
hypothetical protein B456_005G122500 [Gossypium
raimondii] gi|763762637|gb|KJB29891.1| hypothetical
protein B456_005G122500 [Gossypium raimondii]
Length = 857
Score = 38.5 bits (88), Expect(3) = 1e-06
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I K+A+K I +K+V+K+ +++ ++ PR
Sbjct: 793 PTWKEGQIGKEAYKSIVRKVVDKVTATMQGTNIPR 827
Score = 36.6 bits (83), Expect(3) = 1e-06
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +1
Query: 34 LASSFLGKQTGGLPN------ESKKSIDVRTQELVKKTYGSKKGNDGKGLLDFKFALDEL 195
+AS L K+ GG+ E+K + T + +T KK D KG+ FKFAL E
Sbjct: 728 IASFELTKENGGIVQTKKAEAENKNGLSENT-DADDRTEEGKKSKDVKGVRAFKFALVEF 786
Query: 196 VKDLSK 213
VKDL K
Sbjct: 787 VKDLLK 792
Score = 25.0 bits (53), Expect(3) = 1e-06
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHV 368
EKID YL ++PK+SK V
Sbjct: 830 EKIDQYLSFSKPKLSKLV 847
>gb|KJB29889.1| hypothetical protein B456_005G122500 [Gossypium raimondii]
Length = 854
Score = 38.5 bits (88), Expect(3) = 1e-06
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EG+I K+A+K I +K+V+K+ +++ ++ PR
Sbjct: 790 PTWKEGQIGKEAYKSIVRKVVDKVTATMQGTNIPR 824
Score = 36.6 bits (83), Expect(3) = 1e-06
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +1
Query: 34 LASSFLGKQTGGLPN------ESKKSIDVRTQELVKKTYGSKKGNDGKGLLDFKFALDEL 195
+AS L K+ GG+ E+K + T + +T KK D KG+ FKFAL E
Sbjct: 725 IASFELTKENGGIVQTKKAEAENKNGLSENT-DADDRTEEGKKSKDVKGVRAFKFALVEF 783
Query: 196 VKDLSK 213
VKDL K
Sbjct: 784 VKDLLK 789
Score = 25.0 bits (53), Expect(3) = 1e-06
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHV 368
EKID YL ++PK+SK V
Sbjct: 827 EKIDQYLSFSKPKLSKLV 844
>ref|XP_010507053.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 38-like [Camelina sativa]
Length = 687
Score = 37.4 bits (85), Expect(3) = 2e-06
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 209 PKWMEGKISKDAHKIIAKKLVNKIIRSVEASHTPR 313
P W EGK+ KD +K I KK+V K+ ++++ + P+
Sbjct: 623 PAWKEGKMDKDVYKNIVKKVVEKVTVTMQSGNVPQ 657
Score = 35.4 bits (80), Expect(3) = 2e-06
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 52 GKQTGGLPNESKKSIDVRTQEL-VKKTYGSKKGNDGKGLLDFKFALDELVKDLSK 213
GK+TG N+++ +D + V +KKG D K + FKFAL E+VK+L K
Sbjct: 568 GKKTGQDTNDAENIVDEDVDDDGVGSDEENKKGKDPKEMRAFKFALVEVVKELLK 622
Score = 26.6 bits (57), Expect(3) = 2e-06
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 315 EKIDNYLLRARPKISKHVQ 371
EKID YL ++PK++K VQ
Sbjct: 660 EKIDQYLSASKPKLTKLVQ 678