BLASTX nr result
ID: Forsythia22_contig00027491
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00027491
(305 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011079564.1| PREDICTED: DNA mismatch repair protein MSH6 ... 106 5e-21
emb|CBI36942.3| unnamed protein product [Vitis vinifera] 84 5e-14
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein MSH6 ... 84 5e-14
emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera] 84 5e-14
ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-... 83 8e-14
ref|XP_010087248.1| DNA mismatch repair protein Msh6-1 [Morus no... 82 1e-13
ref|XP_010556698.1| PREDICTED: DNA mismatch repair protein MSH6 ... 81 2e-13
ref|XP_010556697.1| PREDICTED: DNA mismatch repair protein MSH6 ... 81 2e-13
ref|XP_009802974.1| PREDICTED: DNA mismatch repair protein MSH6 ... 80 7e-13
ref|XP_012834133.1| PREDICTED: DNA mismatch repair protein MSH6 ... 78 2e-12
emb|CDP17077.1| unnamed protein product [Coffea canephora] 78 3e-12
ref|XP_010932609.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 77 3e-12
ref|XP_010422644.1| PREDICTED: DNA mismatch repair protein MSH6-... 77 5e-12
ref|XP_010422643.1| PREDICTED: DNA mismatch repair protein MSH6-... 77 5e-12
ref|XP_010429135.1| PREDICTED: DNA mismatch repair protein MSH6-... 77 6e-12
ref|XP_004229396.2| PREDICTED: uncharacterized protein LOC101243... 76 1e-11
ref|XP_009134448.1| PREDICTED: DNA mismatch repair protein MSH6 ... 75 1e-11
emb|CDX90956.1| BnaA03g26360D [Brassica napus] 75 1e-11
ref|XP_008800758.1| PREDICTED: DNA mismatch repair protein MSH6 ... 75 2e-11
gb|KDO87015.1| hypothetical protein CISIN_1g000778mg [Citrus sin... 75 2e-11
>ref|XP_011079564.1| PREDICTED: DNA mismatch repair protein MSH6 [Sesamum indicum]
Length = 1339
Score = 106 bits (265), Expect = 5e-21
Identities = 60/102 (58%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Frame = +2
Query: 2 RGKSELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHI-ADSGKVSIPDCTLVGDIA 178
RGK+E A KKS +L+NSVS SF N + T I AD GKVS+ D VGD A
Sbjct: 273 RGKTESIARKKSKIGVELENSVSTVSFAGNSEKRNEPTARISADGGKVSLRDSPTVGDAA 332
Query: 179 ERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
ERF REA KL L VDR+DANRR PGD NYDPRTLYLP +F
Sbjct: 333 ERFVTREAEKLPFLEVDRRDANRRRPGDANYDPRTLYLPPEF 374
>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 83.6 bits (205), Expect = 5e-14
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Frame = +2
Query: 8 KSELSANKKSMGSGDLKNS---VSKFSFGVNEGEPKGSTKHIADSGKVS-IPDCTLVGDI 175
K + + +MGSG + S K +F V+ EP + A+S K S I D L GD
Sbjct: 202 KKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKN----AESRKASDILDNVLPGDA 257
Query: 176 AERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
ERFGAREA KL LG +RKDA RR PGD NYDPRTLYLP +F
Sbjct: 258 LERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNF 300
>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein MSH6 [Vitis vinifera]
Length = 1297
Score = 83.6 bits (205), Expect = 5e-14
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Frame = +2
Query: 8 KSELSANKKSMGSGDLKNS---VSKFSFGVNEGEPKGSTKHIADSGKVS-IPDCTLVGDI 175
K + + +MGSG + S K +F V+ EP + A+S K S I D L GD
Sbjct: 232 KKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKN----AESRKASDILDNVLPGDA 287
Query: 176 AERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
ERFGAREA KL LG +RKDA RR PGD NYDPRTLYLP +F
Sbjct: 288 LERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNF 330
>emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
Length = 1349
Score = 83.6 bits (205), Expect = 5e-14
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Frame = +2
Query: 8 KSELSANKKSMGSGDLKNS---VSKFSFGVNEGEPKGSTKHIADSGKVS-IPDCTLVGDI 175
K + + +MGSG + S K +F V+ EP + A+S K S I D L GD
Sbjct: 240 KKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKN----AESRKASDILDNVLPGDA 295
Query: 176 AERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
ERFGAREA KL LG +RKDA RR PGD NYDPRTLYLP +F
Sbjct: 296 LERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNF 338
>ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum
tuberosum]
Length = 1308
Score = 82.8 bits (203), Expect = 8e-14
Identities = 48/98 (48%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Frame = +2
Query: 20 SANKKSMGSGDLKNSVSKFS---FGVNEGEPKGSTKHIADSGKVSIPDCTLVGDIAERFG 190
S++KKS D +++ SK GVN EP + + D K S D L+ A+RFG
Sbjct: 249 SSSKKSKTVSDKRSANSKMDSAVIGVNGKEPVATKE---DCAKASNNDNVLLCGAADRFG 305
Query: 191 AREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
RE K LG DRKDANRRSPGD NYDPRT+YLP +F
Sbjct: 306 QRETQKFPFLGKDRKDANRRSPGDANYDPRTIYLPLNF 343
>ref|XP_010087248.1| DNA mismatch repair protein Msh6-1 [Morus notabilis]
gi|587837858|gb|EXB28598.1| DNA mismatch repair protein
Msh6-1 [Morus notabilis]
Length = 1302
Score = 82.4 bits (202), Expect = 1e-13
Identities = 49/101 (48%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +2
Query: 5 GKSELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKVSIP-DCTLVGDIAE 181
G+ +L + KK+ G D VSK F V+ EP + +SGK S + L GD +E
Sbjct: 255 GEGKLGSAKKAKGGED----VSKAGFKVSLVEPANNN---VESGKASNAINTALPGDASE 307
Query: 182 RFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
RF REA KLR LG +R+D+ RR PGD +YDPRTLYLP DF
Sbjct: 308 RFSMREAKKLRFLGEERRDSKRRRPGDPDYDPRTLYLPPDF 348
>ref|XP_010556698.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X2 [Tarenaya
hassleriana]
Length = 1116
Score = 81.3 bits (199), Expect = 2e-13
Identities = 49/109 (44%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Frame = +2
Query: 5 GKSELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKV---------SIPDC 157
GK+E ++K SG + +K S + PKG I+D K S+
Sbjct: 94 GKTE---SRKRKASGGAEQGCAKKSSITKDTTPKGFKTSISDPAKKIAEVDKVVKSLDSN 150
Query: 158 TLVGDIAERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
TL + ERFGAREA KLR LG R+D NRR P D NYDPRTLYLP DF
Sbjct: 151 TLANEAVERFGAREAEKLRFLGAVRRDVNRRLPTDENYDPRTLYLPPDF 199
>ref|XP_010556697.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X1 [Tarenaya
hassleriana]
Length = 1265
Score = 81.3 bits (199), Expect = 2e-13
Identities = 49/109 (44%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Frame = +2
Query: 5 GKSELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKV---------SIPDC 157
GK+E ++K SG + +K S + PKG I+D K S+
Sbjct: 243 GKTE---SRKRKASGGAEQGCAKKSSITKDTTPKGFKTSISDPAKKIAEVDKVVKSLDSN 299
Query: 158 TLVGDIAERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
TL + ERFGAREA KLR LG R+D NRR P D NYDPRTLYLP DF
Sbjct: 300 TLANEAVERFGAREAEKLRFLGAVRRDVNRRLPTDENYDPRTLYLPPDF 348
>ref|XP_009802974.1| PREDICTED: DNA mismatch repair protein MSH6 [Nicotiana sylvestris]
Length = 1314
Score = 79.7 bits (195), Expect = 7e-13
Identities = 46/99 (46%), Positives = 57/99 (57%)
Frame = +2
Query: 8 KSELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKVSIPDCTLVGDIAERF 187
K S++KKS D K++ SK VN K K D + + D L+ A+RF
Sbjct: 254 KLSSSSSKKSKTLADKKSANSKVDNAVNGVNGKELVKTNEDCVRPTNNDNVLLCGAADRF 313
Query: 188 GAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
G REA K + DRKDANRRSPGD NYDP+TLYLP +F
Sbjct: 314 GQREAEKFPFVAKDRKDANRRSPGDANYDPKTLYLPPNF 352
>ref|XP_012834133.1| PREDICTED: DNA mismatch repair protein MSH6 [Erythranthe guttatus]
Length = 1300
Score = 78.2 bits (191), Expect = 2e-12
Identities = 48/95 (50%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +2
Query: 23 ANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHI-ADSGKVSIPDCTLVGDIAERFGARE 199
+NKK G+ K+S SK F + + STK A S KVS D + VGD AERF RE
Sbjct: 247 SNKKRKTGGECKSSASKAPFAGDAEKLVDSTKRTSASSPKVSPLDSSKVGDDAERFVLRE 306
Query: 200 AVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
A K + +RKDA R PGDVNYD RTLYLP F
Sbjct: 307 ADKFGFVEKNRKDAEGRRPGDVNYDSRTLYLPPSF 341
>emb|CDP17077.1| unnamed protein product [Coffea canephora]
Length = 1300
Score = 77.8 bits (190), Expect = 3e-12
Identities = 53/106 (50%), Positives = 64/106 (60%), Gaps = 6/106 (5%)
Frame = +2
Query: 5 GKSELSAN--KKSMGSGDLKNSVSKFSF---GVNEGEPKGSTKHIADSGKVSIPDCTLVG 169
G ++L AN KK GD + SK S G N EP G+ I++ G I C
Sbjct: 237 GAAKLGANSSKKIKNVGDTEQIDSKISCHVKGENLIEPAGNNV-ISEKG---IDSCRTSI 292
Query: 170 DIAE-RFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
D+AE RFGAREA KL LG DR+DANRR PG V+YDP+TLYLP +F
Sbjct: 293 DVAEERFGAREAGKLWFLGKDRRDANRRRPGHVDYDPKTLYLPPEF 338
>ref|XP_010932609.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH6
[Elaeis guineensis]
Length = 1287
Score = 77.4 bits (189), Expect = 3e-12
Identities = 43/97 (44%), Positives = 53/97 (54%)
Frame = +2
Query: 14 ELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKVSIPDCTLVGDIAERFGA 193
+L KK GD + S SK S GS + + D TL G+ AERFG
Sbjct: 233 KLDCAKKVRFDGDGEKSTSKASLSSIRSSTVGSLSNSERGHVLYNLDSTLTGEAAERFGK 292
Query: 194 REAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
REA + R LG RKDA+ R PGD +YDP+TLYLP +F
Sbjct: 293 REAERFRFLGQGRKDAHGRQPGDADYDPKTLYLPPEF 329
>ref|XP_010422644.1| PREDICTED: DNA mismatch repair protein MSH6-like isoform X2
[Camelina sativa]
Length = 1322
Score = 77.0 bits (188), Expect = 5e-12
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = +2
Query: 2 RGKSELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKV--SIPDCTLVGDI 175
R SE++ + S K+++ K F + EP K I ++ KV + D L GD
Sbjct: 274 RKASEVTKSGSEKKSRTDKDTILK-GFKASVVEPP---KKIVEADKVVKGLDDTILDGDA 329
Query: 176 AERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
RFGARE+ K R LGVDR+DA RR P D NYDPRTLYLP DF
Sbjct: 330 LARFGARESEKFRFLGVDRRDAKRRRPTDENYDPRTLYLPPDF 372
>ref|XP_010422643.1| PREDICTED: DNA mismatch repair protein MSH6-like isoform X1
[Camelina sativa]
Length = 1118
Score = 77.0 bits (188), Expect = 5e-12
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = +2
Query: 2 RGKSELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKV--SIPDCTLVGDI 175
R SE++ + S K+++ K F + EP K I ++ KV + D L GD
Sbjct: 70 RKASEVTKSGSEKKSRTDKDTILK-GFKASVVEPP---KKIVEADKVVKGLDDTILDGDA 125
Query: 176 AERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
RFGARE+ K R LGVDR+DA RR P D NYDPRTLYLP DF
Sbjct: 126 LARFGARESEKFRFLGVDRRDAKRRRPTDENYDPRTLYLPPDF 168
>ref|XP_010429135.1| PREDICTED: DNA mismatch repair protein MSH6-like [Camelina sativa]
Length = 1325
Score = 76.6 bits (187), Expect = 6e-12
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = +2
Query: 2 RGKSELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKV--SIPDCTLVGDI 175
R SE++ + S K+++ K F + EP K I ++ KV + D L GD
Sbjct: 279 RKSSEVTKSGSEKKSRTDKDTILK-GFKASVVEPP---KKIVEADKVVKGLDDNILDGDA 334
Query: 176 AERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
RFGARE+ K R LGVDR+DA RR P D NYDPRTLYLP DF
Sbjct: 335 LARFGARESEKFRFLGVDRRDAKRRRPTDENYDPRTLYLPPDF 377
>ref|XP_004229396.2| PREDICTED: uncharacterized protein LOC101243927 [Solanum
lycopersicum]
Length = 2996
Score = 75.9 bits (185), Expect = 1e-11
Identities = 45/98 (45%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Frame = +2
Query: 20 SANKKSMGSGDLKNSVSKFS---FGVNEGEPKGSTKHIADSGKVSIPDCTLVGDIAERFG 190
S++KKS D +++ SK GVN EP + + D K S L+ A+RFG
Sbjct: 1936 SSSKKSKTLADKRSANSKMDSAVIGVNGKEPTATNE---DCAKASNNVNVLLCGAADRFG 1992
Query: 191 AREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
RE K LG DRKDANRRSP D +YDPRT+YLP +F
Sbjct: 1993 QRETQKFPFLGKDRKDANRRSPDDADYDPRTIYLPPNF 2030
>ref|XP_009134448.1| PREDICTED: DNA mismatch repair protein MSH6 [Brassica rapa]
Length = 1337
Score = 75.5 bits (184), Expect = 1e-11
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 KHIADSGKV--SIPDCTLVGDIAERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLY 289
K I ++ KV S+ D L GD RFGARE+ K R +G+DR+DA RR P D NYDPRTLY
Sbjct: 317 KKIGEADKVVKSLDDNMLDGDALARFGARESEKFRFMGIDRRDAKRRRPTDENYDPRTLY 376
Query: 290 LPQDF 304
LP DF
Sbjct: 377 LPPDF 381
>emb|CDX90956.1| BnaA03g26360D [Brassica napus]
Length = 1337
Score = 75.5 bits (184), Expect = 1e-11
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = +2
Query: 116 KHIADSGKV--SIPDCTLVGDIAERFGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLY 289
K I ++ KV S+ D L GD RFGARE+ K R +G+DR+DA RR P D NYDPRTLY
Sbjct: 317 KKIGEADKVVKSLDDNMLDGDALARFGARESEKFRFMGIDRRDAKRRRPTDENYDPRTLY 376
Query: 290 LPQDF 304
LP DF
Sbjct: 377 LPPDF 381
>ref|XP_008800758.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X1 [Phoenix
dactylifera]
Length = 1292
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/88 (45%), Positives = 50/88 (56%)
Frame = +2
Query: 41 GSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKVSIPDCTLVGDIAERFGAREAVKLRLL 220
G GD + S SK S GS + + D +L G+ AERFG REA + R L
Sbjct: 239 GDGDGEKSASKASLSGIRTSTVGSLSNFERGQVLHTLDSSLTGEAAERFGKREAERFRFL 298
Query: 221 GVDRKDANRRSPGDVNYDPRTLYLPQDF 304
G RKDA+ R PGD +YDP+TLYLP +F
Sbjct: 299 GEGRKDAHGRWPGDADYDPKTLYLPPEF 326
>gb|KDO87015.1| hypothetical protein CISIN_1g000778mg [Citrus sinensis]
Length = 987
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 8 KSELSANKKSMGSGDLKNSVSKFSFGVNEGEPKGSTKHIADSGKVSIP-DCTLVGDIAER 184
K + S KKS G+ N+ K P I S K+S D ++GD++ER
Sbjct: 232 KRKSSGVKKSKSDGNAVNADFK--------SPIIKPVKIFGSDKLSNGFDNPVMGDVSER 283
Query: 185 FGAREAVKLRLLGVDRKDANRRSPGDVNYDPRTLYLPQDF 304
F AREA K LG DR+DA RR PGDV YDPRTLYLP DF
Sbjct: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDF 323