BLASTX nr result
ID: Forsythia22_contig00027004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00027004
(736 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002535497.1| conserved hypothetical protein [Ricinus comm... 86 6e-27
ref|XP_011101728.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 102 2e-19
gb|AJO25113.1| hypothetical chloroplast RF34 (chloroplast) [Sola... 91 9e-16
gb|AHY80541.1| hypothetical chloroplast RF34 [Beta vulgaris subs... 89 2e-15
ref|YP_008592640.1| photosystem I assembly protein ycf3 (chlorop... 89 2e-15
gb|AFB70727.1| photosystem I assembly protein Ycf3, partial (chl... 89 2e-15
gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rume... 89 3e-15
gb|AAZ03964.1| Ycf3 [Ranunculus macranthus] 89 3e-15
ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrom... 89 3e-15
gb|ADD30856.1| putative RF3 protein (chloroplast) [Dillenia indica] 89 3e-15
gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast)... 89 3e-15
ref|YP_778493.1| photosystem I assembly protein Ycf3 [Jasminum n... 89 3e-15
gb|AHF21152.1| hypothetical chloroplast RF34 [Erodium manescavi]... 88 5e-15
ref|YP_008082582.1| hypothetical chloroplast RF34 (chloroplast) ... 88 5e-15
gb|AKM98081.1| photosystem I assembly protein Ycf3 (chloroplast)... 88 6e-15
ref|YP_009154952.1| photosystem I assembly protein Ycf3 (chlorop... 88 6e-15
ref|YP_009144628.1| photosystem I assembly protein Ycf3 (chlorop... 88 6e-15
ref|YP_009127856.1| hypothetical chloroplast RF34 (chloroplast) ... 88 6e-15
ref|YP_009127279.1| hypothetical chloroplast RF34 (chloroplast) ... 88 6e-15
ref|YP_009127195.1| hypothetical chloroplast RF34 (chloroplast) ... 88 6e-15
>ref|XP_002535497.1| conserved hypothetical protein [Ricinus communis]
gi|223522895|gb|EEF26886.1| conserved hypothetical
protein [Ricinus communis]
Length = 110
Score = 86.3 bits (212), Expect(2) = 6e-27
Identities = 54/97 (55%), Positives = 55/97 (56%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVIXXXXXXXXXLSVLRER 327
MPRSRI GN IDKTF VA ILLRIIPTTSGEKEAFTYYRD
Sbjct: 1 MPRSRITGNSIDKTF--VAKILLRIIPTTSGEKEAFTYYRD------------------- 39
Query: 326 HVIQENF*NKSTLVEGEVWK*NNSFCRVSSINATSDA 216
GEV+K NNSFCRVS INA SDA
Sbjct: 40 ---------------GEVYKENNSFCRVSPINAASDA 61
Score = 62.4 bits (150), Expect(2) = 6e-27
Identities = 35/49 (71%), Positives = 35/49 (71%)
Frame = -1
Query: 202 DSSIERKVTPRGSLLWVNPTPLVPIGSIGEEALHLGINNTKTLLEITPF 56
DSSIERKV NPTPLVPIG I EEAL LGINNTK LLEI PF
Sbjct: 65 DSSIERKV---------NPTPLVPIGGIKEEALRLGINNTKPLLEIFPF 104
>ref|XP_011101728.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC105179794 [Sesamum indicum]
Length = 66
Score = 102 bits (255), Expect = 2e-19
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = -3
Query: 158 MGQSYSTSTNRQHRGRSTTPRNQQHENFVRNYPFPYRARD*KNGWDNKHPS 6
MGQSYST+TN QH+GRSTTPRNQQHEN VRNYPFPY ARD KNGWDNKHPS
Sbjct: 1 MGQSYSTNTNGQHKGRSTTPRNQQHENLVRNYPFPYGARDXKNGWDNKHPS 51
>gb|AJO25113.1| hypothetical chloroplast RF34 (chloroplast) [Solanum lycopersicum]
Length = 171
Score = 90.5 bits (223), Expect = 9e-16
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = -3
Query: 515 LLPMPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 378
+LPMPRSRINGNFIDKTFSIVA+ILLR+IPTTSGEKEAFTYYRDG+
Sbjct: 1 MLPMPRSRINGNFIDKTFSIVADILLRVIPTTSGEKEAFTYYRDGM 46
>gb|AHY80541.1| hypothetical chloroplast RF34 [Beta vulgaris subsp. vulgaris]
Length = 169
Score = 89.4 bits (220), Expect = 2e-15
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>ref|YP_008592640.1| photosystem I assembly protein ycf3 (chloroplast) [Berberis bealei]
gi|536462681|gb|AGU37046.1| photosystem I assembly
protein ycf3 (chloroplast) [Berberis bealei]
Length = 169
Score = 89.4 bits (220), Expect = 2e-15
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>gb|AFB70727.1| photosystem I assembly protein Ycf3, partial (chloroplast) [Mollugo
verticillata]
Length = 217
Score = 89.4 bits (220), Expect = 2e-15
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rumex acetosa]
Length = 169
Score = 89.0 bits (219), Expect = 3e-15
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVM 44
>gb|AAZ03964.1| Ycf3 [Ranunculus macranthus]
Length = 170
Score = 89.0 bits (219), Expect = 3e-15
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG I
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 44
>ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrometrica]
gi|340549408|gb|AEK53230.1| hypothetical chloroplast
RF34 (chloroplast) [Boea hygrometrica]
Length = 171
Score = 89.0 bits (219), Expect = 3e-15
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILL+IIPTTSGEKEAFTYYRDGVI
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKEAFTYYRDGVI 44
>gb|ADD30856.1| putative RF3 protein (chloroplast) [Dillenia indica]
Length = 168
Score = 88.6 bits (218), Expect = 3e-15
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG++
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGML 44
>gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast) [Solanum
carolinense]
Length = 44
Score = 88.6 bits (218), Expect = 3e-15
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILLR+IPTTSGEKEAFTYYRDG I
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDGAI 44
>ref|YP_778493.1| photosystem I assembly protein Ycf3 [Jasminum nudiflorum]
gi|122164970|sp|Q06RC8.1|YCF3_JASNU RecName:
Full=Photosystem I assembly protein Ycf3
gi|110456226|gb|ABG74631.1| YCF3 protein [Jasminum
nudiflorum]
Length = 168
Score = 88.6 bits (218), Expect = 3e-15
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 378
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGI 43
>gb|AHF21152.1| hypothetical chloroplast RF34 [Erodium manescavi]
gi|574450429|gb|AHG24613.1| hypothetical chloroplast
RF34 [Erodium foetidum subsp. foetidum]
Length = 169
Score = 88.2 bits (217), Expect = 5e-15
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILLRIIPTTSGE+EAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEREAFTYYRDGVM 44
>ref|YP_008082582.1| hypothetical chloroplast RF34 (chloroplast) [Utricularia gibba]
gi|498921855|gb|AGL61076.1| hypothetical chloroplast
RF34 (chloroplast) [Utricularia gibba]
Length = 169
Score = 88.2 bits (217), Expect = 5e-15
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILL+IIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLKIIPTTSGEKEAFTYYRDGVM 44
>gb|AKM98081.1| photosystem I assembly protein Ycf3 (chloroplast) [Anemone patens]
gi|844170208|gb|AKM98169.1| photosystem I assembly
protein Ycf3 (chloroplast) [Anemone patens]
gi|844170334|gb|AKM98257.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pulsatilla pratensis]
gi|844170456|gb|AKM98345.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pulsatilla pratensis]
gi|844170588|gb|AKM98433.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pulsatilla vernalis]
gi|844170729|gb|AKM98521.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pulsatilla vernalis]
Length = 172
Score = 87.8 bits (216), Expect = 6e-15
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 378
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43
>ref|YP_009154952.1| photosystem I assembly protein Ycf3 (chloroplast) [Gentiana
straminea] gi|884997239|ref|YP_009155037.1| photosystem
I assembly protein Ycf3 (chloroplast) [Gentiana
crassicaulis] gi|658157551|gb|AID57326.1| photosystem I
assembly protein Ycf3 (chloroplast) [Gentiana straminea]
gi|659105141|gb|AID61136.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gentiana crassicaulis]
Length = 168
Score = 87.8 bits (216), Expect = 6e-15
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 378
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43
>ref|YP_009144628.1| photosystem I assembly protein Ycf3 (chloroplast) [Scutellaria
baicalensis] gi|827345839|gb|AKJ77140.1| photosystem I
assembly protein Ycf3 (chloroplast) [Scutellaria
baicalensis]
Length = 169
Score = 87.8 bits (216), Expect = 6e-15
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILL+IIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKEAFTYYRDGVM 44
>ref|YP_009127856.1| hypothetical chloroplast RF34 (chloroplast) [Tamarindus indica]
Length = 169
Score = 87.8 bits (216), Expect = 6e-15
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 375
MPRSRINGNFIDKTFSIVANILL+IIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKEAFTYYRDGVM 44
>ref|YP_009127279.1| hypothetical chloroplast RF34 (chloroplast) [Ceratonia siliqua]
Length = 168
Score = 87.8 bits (216), Expect = 6e-15
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 378
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43
>ref|YP_009127195.1| hypothetical chloroplast RF34 (chloroplast) [Libidibia coriaria]
gi|772649883|ref|YP_009127362.1| hypothetical
chloroplast RF34 (chloroplast) [Haematoxylum brasiletto]
gi|788229677|ref|YP_009127693.1| hypothetical
chloroplast RF34 (chloroplast) [Prosopis glandulosa]
Length = 168
Score = 87.8 bits (216), Expect = 6e-15
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = -3
Query: 506 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 378
MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43