BLASTX nr result
ID: Forsythia22_contig00026978
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00026978
(1194 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 378 e-117
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] 375 e-114
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera] 332 6e-98
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 336 2e-97
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] 328 2e-97
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 323 9e-96
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 315 6e-94
ref|XP_011467783.1| PREDICTED: tyrosine-protein phosphatase non-... 342 3e-92
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera] 308 2e-87
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 298 3e-86
emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera] 320 1e-84
ref|XP_009109940.1| PREDICTED: uncharacterized protein LOC103835... 254 4e-73
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 253 1e-72
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 249 2e-70
ref|XP_010675988.1| PREDICTED: uncharacterized protein LOC104891... 246 2e-70
gb|ACB45089.1| putative polyprotein [Solanum habrochaites] 244 6e-70
ref|XP_010675539.1| PREDICTED: uncharacterized protein LOC104891... 245 1e-69
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 249 2e-69
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 240 2e-69
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 240 2e-69
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 378 bits (971), Expect(2) = e-117
Identities = 180/301 (59%), Positives = 223/301 (74%), Gaps = 2/301 (0%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYLSQ--KPQIHHITSGSTKLCHRCLGHP*ASPLQ 443
F DFCV++D TT+KTIGLG+ NG YYL+Q P + + + L H+ LGHP + PLQ
Sbjct: 493 FFDFCVVQDATTRKTIGLGKQHNGLYYLAQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQ 552
Query: 444 FIAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGPHKIYSYSGA 623
+A+ I FDS +CD+C LAKQ+RL F S ISS+ PFDLIHCDIWGPH+I S+SGA
Sbjct: 553 VLAKVNPKIYFDSKHVCDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGA 612
Query: 624 RYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDNGQEFLSLQT 803
YFLTIVDD +RYTW+HLM KSETQ I+++F +WV+TQ N IK LR+DNG E S++
Sbjct: 613 XYFLTIVDDHTRYTWIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISSMKQ 672
Query: 804 FLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQHIKTACYLIN 983
+LD G +H SC YTPQQN VVERKHRHLLNV RA++FQANLPLKFWG+ I+TACYLIN
Sbjct: 673 YLDTKGINYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLIN 732
Query: 984 RIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKFHTRARQCVFLGYSSGQ 1163
R+P+PLLSHK+ Y+ HLR + CLC+ NL P HKF RAR+C+F+GY GQ
Sbjct: 733 RLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLPTHKFDQRARRCIFVGYPLGQ 792
Query: 1164 K 1166
K
Sbjct: 793 K 793
Score = 73.6 bits (179), Expect(2) = e-117
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = +1
Query: 73 IIEIKSMPKHNTVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGL 252
+++ K++PK T+ LPNGG I+SIG+++ ++ +D+VL VP F+VN+L++SKLTR L
Sbjct: 427 LLDPKNLPKTTTISLPNGGQAHIESIGSLHVTPHIKLDDVLKVPQFQVNLLSVSKLTRAL 486
Query: 253 GCYVTFFLIF 282
C V FF F
Sbjct: 487 QCIVMFFFDF 496
>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
Length = 1039
Score = 375 bits (962), Expect(2) = e-114
Identities = 178/299 (59%), Positives = 221/299 (73%), Gaps = 2/299 (0%)
Frame = +3
Query: 276 DFCVMKDLTTKKTIGLGRLSNGPYYLSQ--KPQIHHITSGSTKLCHRCLGHP*ASPLQFI 449
DFCV++D TT+KT GLG+ NG YYL+Q P + + + L H+ LGHP + PLQ +
Sbjct: 87 DFCVVQDATTRKTXGLGKQHNGLYYLAQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVL 146
Query: 450 AQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGPHKIYSYSGARY 629
A+ I FDS +CD+ LAKQ+RL F S ISS+ PFDLIHCDIWGPH+I S+SGARY
Sbjct: 147 AKVNXEIYFDSKHVCDIXPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGARY 206
Query: 630 FLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDNGQEFLSLQTFL 809
FLTIVDD +RYTW+HLM KSETQ I+++F +WV+TQ N IK LR+DNG E S++ +L
Sbjct: 207 FLTIVDDHTRYTWIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISSMKQYL 266
Query: 810 DENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQHIKTACYLINRI 989
D G +H SC YTPQQN VVERKHRHLLNV RA++FQANLPLKFWG+ I+TACYLINR+
Sbjct: 267 DTKGINYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRL 326
Query: 990 PSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKFHTRARQCVFLGYSSGQK 1166
P+PLLSHK+ Y+ HLR + CLC+ NL P HKF RAR+C+F+GY GQK
Sbjct: 327 PTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLPTHKFDQRARRCIFVGYPLGQK 385
Score = 67.0 bits (162), Expect(2) = e-114
Identities = 30/66 (45%), Positives = 48/66 (72%)
Frame = +1
Query: 73 IIEIKSMPKHNTVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGL 252
+++ K +PK T+ LP+GG I+SIG+++ ++ +D+VL VP F+VN+L++SKLTR L
Sbjct: 19 LLDPKILPKTTTISLPDGGQAHIESIGSLHVTPHIKLDDVLKVPQFQVNLLSVSKLTRAL 78
Query: 253 GCYVTF 270
C V F
Sbjct: 79 QCIVMF 84
>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
Length = 1236
Score = 332 bits (852), Expect(2) = 6e-98
Identities = 165/321 (51%), Positives = 216/321 (67%), Gaps = 18/321 (5%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYL----SQKPQIH--------------HITSGST 395
FP +C+++DLTT+ TIGLG +G YYL S+KP+ +TS ST
Sbjct: 439 FPHWCILQDLTTRTTIGLGEQRDGLYYLVALASKKPKTQTPSAAATSCRSPSSQVTS-ST 497
Query: 396 KLCHRCLGHP*ASPLQFIAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLI 575
L HRCLGH +S L F+A+ +L F S++ CDVC LAKQ RLPF VS ISS +PF+LI
Sbjct: 498 ALWHRCLGHLSSSRLDFMAKHLLNFPFQSNNACDVCALAKQRRLPFSVSSISSVRPFELI 557
Query: 576 HCDIWGPHKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTI 755
HCDIWGP+KI S S A+YFLTIVDD+SR+TWV M HKSETQ ++ NFF++V+TQ +++I
Sbjct: 558 HCDIWGPYKIASLSSAKYFLTIVDDYSRFTWVFFMHHKSETQHLLVNFFSFVQTQFHVSI 617
Query: 756 KVLRSDNGQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLP 935
+R DNG EF S++ F + GT + SC YTPQQN VVERKH H+L ARA FQA+LP
Sbjct: 618 ANIRVDNGGEFFSMREFFKQKGTTYQHSCVYTPQQNGVVERKHCHILESARAFHFQAHLP 677
Query: 936 LKFWGQHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKF 1115
L FW + + T ++INR+P+PLLS +T +E H+RV+ CL + N+ HKF
Sbjct: 678 LPFWAECVSTVVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYATNVHIPHKF 737
Query: 1116 HTRARQCVFLGYSSGQKRIHL 1178
RA++C+FLGY GQK L
Sbjct: 738 APRAKRCIFLGYPVGQKAYKL 758
Score = 54.7 bits (130), Expect(2) = 6e-98
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +1
Query: 109 VQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
V +P+G PI SIG + +T+ N L VP+FKV+++++S++T+ L C VTFF
Sbjct: 385 VAMPSGEQAPITSIGNLPLNYVVTLKNALGVPSFKVDLMSVSRVTKDLNCSVTFF 439
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 336 bits (862), Expect(2) = 2e-97
Identities = 166/318 (52%), Positives = 213/318 (66%), Gaps = 15/318 (4%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYLS---------------QKPQIHHITSGSTKLC 404
FP +CV++DL T++ IGLG+ +G YYL+ +P ++T+ ST L
Sbjct: 489 FPHWCVLQDLATRRMIGLGKQRDGLYYLAALTTNKTETNSYSSPNRPPTCNLTTSSTDLW 548
Query: 405 HRCLGHP*ASPLQFIAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCD 584
H LGH S L FIA++ L S ++ C +C LAKQ RLPF S+ISS KPFDLIHCD
Sbjct: 549 HSRLGHVSHSRLSFIAKNFLNFSIQFNNDCPICLLAKQHRLPFGTSEISSEKPFDLIHCD 608
Query: 585 IWGPHKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVL 764
IWG +K S SGA YFLTIVDD++R+TW+ LM+HK E Q +IK+FF++V TQ IK+
Sbjct: 609 IWGRYKHSSLSGAHYFLTIVDDYTRFTWIFLMKHKDEAQPLIKHFFSYVSTQFASHIKIF 668
Query: 765 RSDNGQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKF 944
RSDNG EFLSLQ+F +NG +F SC YTPQQN VVERKHRH+L VARA+KFQA LP +F
Sbjct: 669 RSDNGGEFLSLQSFFKDNGVLFQHSCVYTPQQNGVVERKHRHILQVARALKFQAQLPTQF 728
Query: 945 WGQHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKFHTR 1124
WG+ TA ++INR+PSP+LS KT +E HLRV+ CL + N+ +HKF R
Sbjct: 729 WGECALTAVHIINRLPSPVLSFKTPFERLYLKPPTYSHLRVFGCLAYATNVHVSHKFDHR 788
Query: 1125 ARQCVFLGYSSGQKRIHL 1178
A C+F+GY GQK L
Sbjct: 789 AIACIFIGYPVGQKAYKL 806
Score = 49.3 bits (116), Expect(2) = 2e-97
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +1
Query: 109 VQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
V LP+G I + G++ + + +VL VP FKV+++++S+LTRGL C VTFF
Sbjct: 435 VLLPSGEKANIVAKGSLPLNSVYYLRDVLCVPTFKVDLMSVSRLTRGLNCSVTFF 489
>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
Length = 1125
Score = 328 bits (841), Expect(2) = 2e-97
Identities = 165/321 (51%), Positives = 216/321 (67%), Gaps = 18/321 (5%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYL----SQKPQIH--------------HITSGST 395
FP +C+++DLTT+ TIGLG +G YYL S+KP+ +TS ST
Sbjct: 192 FPHWCILQDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSAATTSCRSPSSQVTS-ST 250
Query: 396 KLCHRCLGHP*ASPLQFIAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLI 575
L HR LGH +S L F+A+ +L F S++ CDVC LAKQ +LPF VS ISS +PF+LI
Sbjct: 251 ALWHRRLGHLSSSRLDFMAKHLLNFHFQSNNACDVCALAKQRQLPFSVSSISSVRPFELI 310
Query: 576 HCDIWGPHKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTI 755
HCDIWGP+KI S SGA+YFLTIVDD+SR+T V M HKSETQ ++ NFF++V+TQ +++I
Sbjct: 311 HCDIWGPYKIASLSGAKYFLTIVDDYSRFTXVFFMHHKSETQHLLVNFFSFVQTQFHVSI 370
Query: 756 KVLRSDNGQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLP 935
+R DNG EF S + F + GT + SC YTPQQN VVERKHRH+L ARA FQA+LP
Sbjct: 371 ANIRVDNGGEFFSXREFFKQKGTTYQHSCVYTPQQNGVVERKHRHILESARAFXFQAHLP 430
Query: 936 LKFWGQHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKF 1115
L FW + + TA ++INR+P+PLLS +T +E H+RV+ CL + N+ HKF
Sbjct: 431 LPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYATNVHVPHKF 490
Query: 1116 HTRARQCVFLGYSSGQKRIHL 1178
RA++C+FLGY GQK L
Sbjct: 491 APRAKRCIFLGYPVGQKAYKL 511
Score = 57.0 bits (136), Expect(2) = 2e-97
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = +1
Query: 109 VQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
V +P+G PI SIG + + T+ NVL VP+FKV+++++S++T+ L C VTFF
Sbjct: 138 VAMPSGEQAPITSIGNLPLNSAATLKNVLGVPSFKVDLMSVSRVTKDLNCSVTFF 192
>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
Length = 1059
Score = 323 bits (827), Expect(2) = 9e-96
Identities = 161/321 (50%), Positives = 213/321 (66%), Gaps = 18/321 (5%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYL----SQKPQIH--------------HITSGST 395
FP +C+++DLTT+ TIGLG +G YYL S+KP+ +TS ST
Sbjct: 456 FPHWCILQDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSXXATSCRSPSSQVTS-ST 514
Query: 396 KLCHRCLGHP*ASPLQFIAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLI 575
L H LGH +S L F+A+ +L F S++ CDVC LAKQ RLPF VS ISS +PF+LI
Sbjct: 515 ALWHXRLGHLSSSRLDFMAKHLLNFPFQSNNACDVCXLAKQRRLPFSVSSISSVRPFELI 574
Query: 576 HCDIWGPHKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTI 755
HCD WGP+KI S SGA+ FLTIVDD+SR+TWV M HKSETQ ++ FF++V+TQ +++I
Sbjct: 575 HCDXWGPYKIASLSGAKXFLTIVDDYSRFTWVFFMHHKSETQHLLVKFFSFVQTQFHVSI 634
Query: 756 KVLRSDNGQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLP 935
+R DNG EF S++ F + GT + SC YT QQN VVERKHRH+L RA +FQA+LP
Sbjct: 635 ANIRVDNGGEFFSMREFFKQKGTTYQHSCVYTSQQNGVVERKHRHILESTRAFRFQAHLP 694
Query: 936 LKFWGQHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKF 1115
L FW + + TA ++INR+P+PLLS +T +E H+RV+ CL + N+ HKF
Sbjct: 695 LPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYATNVHVPHKF 754
Query: 1116 HTRARQCVFLGYSSGQKRIHL 1178
RA++C+FLGY GQK L
Sbjct: 755 APRAKRCIFLGYPVGQKAYKL 775
Score = 57.0 bits (136), Expect(2) = 9e-96
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = +1
Query: 109 VQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
V +P+G PI SIG + + T+ NVL VP+FKV+++++S++T+ L C VTFF
Sbjct: 402 VAMPSGEQAPITSIGNLPLNSAATLKNVLGVPSFKVDLMSVSRVTKDLNCSVTFF 456
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 315 bits (807), Expect(2) = 6e-94
Identities = 151/302 (50%), Positives = 205/302 (67%), Gaps = 3/302 (0%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYL---SQKPQIHHITSGSTKLCHRCLGHP*ASPL 440
FPD+C+++DL + K IG G+ G YY+ + K + H++ S L H LGHP S
Sbjct: 724 FPDYCILQDLVSGKMIGSGKQRGGLYYMHPSTNKSVVFHVSQPSD-LWHLRLGHPSFSRF 782
Query: 441 QFIAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGPHKIYSYSG 620
+ +++ + I + + C +C AKQ+RLPF S I++ PF L+HCD+WGPHKI +++G
Sbjct: 783 KLLSRLLPDIHKEIGNHCPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKIPAHTG 842
Query: 621 ARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDNGQEFLSLQ 800
+RYFLTIVDDFSR TW+ LM HKSETQS++ NF +VKTQ + ++ +R DNG EF+ L+
Sbjct: 843 SRYFLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQFVKTQFHTDVQTVRMDNGTEFIPLR 902
Query: 801 TFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQHIKTACYLI 980
FL G SC YTPQQN VVERKHRH+LNVAR++ FQ+N+PL+FWG+ + TA YLI
Sbjct: 903 IFLQNKGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLI 962
Query: 981 NRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKFHTRARQCVFLGYSSG 1160
NRIP+PLLS+K+ +E HLRV+ C C+ N+ P KF RA CVFLGY G
Sbjct: 963 NRIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCECYVTNVHPKQKFDPRASICVFLGYPHG 1022
Query: 1161 QK 1166
+K
Sbjct: 1023 KK 1024
Score = 58.5 bits (140), Expect(2) = 6e-94
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +1
Query: 106 TVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
TV LPNG PI GTV F++ +T+ +VL VP+F +N+++ SKL + CY+ FF
Sbjct: 669 TVNLPNGVASPITHTGTVIFDSQLTLKDVLCVPSFNLNLISASKLAKDQNCYIIFF 724
>ref|XP_011467783.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 23-like
[Fragaria vesca subsp. vesca]
Length = 627
Score = 342 bits (878), Expect(2) = 3e-92
Identities = 175/320 (54%), Positives = 217/320 (67%), Gaps = 17/320 (5%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYL------SQKPQIH---------HITSGSTKLC 404
FP +C+++DL ++KTIGLG+ NG YYL KP+ H H+T+ S+ L
Sbjct: 17 FPYWCILQDLISRKTIGLGKERNGLYYLVALMTKKTKPKPHQSSTIQHSCHLTTSSSNLW 76
Query: 405 HRCLGHP*ASPLQFIAQSILGISF--DSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIH 578
HR LGH +SPL +IA+ L IS DS+ CD+C LAKQSRL F S ISS KPFDLIH
Sbjct: 77 HRRLGHVSSSPLDYIAKHFLDISIPSDSNHACDICPLAKQSRLSFGTSSISSVKPFDLIH 136
Query: 579 CDIWGPHKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIK 758
CDIWGP+K S SGARYFLTIVDD+ R++WV LM+HK +TQS+IK FFA+ TQ + IK
Sbjct: 137 CDIWGPYKHPSLSGARYFLTIVDDYFRFSWVFLMQHKWDTQSLIKQFFAFASTQFSSQIK 196
Query: 759 VLRSDNGQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPL 938
RSD G EFLSL+ F +NG IF SC Y PQQN VVE KHRH+L VARA +FQANLP+
Sbjct: 197 TFRSDIGAEFLSLRNFFKDNGVIFQHSCVYMPQQNGVVESKHRHILQVARAFRFQANLPI 256
Query: 939 KFWGQHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKFH 1118
KFWG+ I TA ++INR+P+PLLS +T +E HL V+ CL F N++ HKF
Sbjct: 257 KFWGECILTAVHVINRLPTPLLSFQTPFERLYSRPPPFHHLPVFGCLAFATNVKVTHKFA 316
Query: 1119 TRARQCVFLGYSSGQKRIHL 1178
RA C+F+GY GQK L
Sbjct: 317 PRAVMCIFIGYPVGQKAYKL 336
Score = 25.8 bits (55), Expect(2) = 3e-92
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 223 LAISKLTRGLGCYVTFF 273
+++S+LTR + C VTFF
Sbjct: 1 MSVSRLTRDMNCSVTFF 17
>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
Length = 1472
Score = 308 bits (788), Expect(2) = 2e-87
Identities = 154/317 (48%), Positives = 205/317 (64%), Gaps = 14/317 (4%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYL----SQKPQIHHITS----------GSTKLCH 407
FP +C++++L T++TIGLG+ +G YYL ++K +H +S ST L H
Sbjct: 449 FPYWCILQNLATRRTIGLGKQRDGLYYLVALATEKSLTNHSSSTNQPACNLAISSTDLWH 508
Query: 408 RCLGHP*ASPLQFIAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDI 587
LGH S L FIA++ L S S++ C +C LAKQSRLPF S ISS KPF++IHC I
Sbjct: 509 SRLGHVSPSRLSFIAKNFLNFSVQSNNACPICPLAKQSRLPFGTSAISSTKPFEIIHCHI 568
Query: 588 WGPHKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLR 767
WG ++ S GA YFLTIVDD++R+TW+ LMRHK E QS++K FF++V TQ IK R
Sbjct: 569 WGRYQHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFCIKTFR 628
Query: 768 SDNGQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFW 947
+DNG+EF SL +F +NG IF S YTPQQN VVERKHRH+L V RA+KF A +P +FW
Sbjct: 629 NDNGREFTSLHSFFQDNGVIFQHSYVYTPQQNGVVERKHRHILQVTRALKFHAQVPTQFW 688
Query: 948 GQHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKFHTRA 1127
G+ TA ++IN +PSP+LS KT +E +L V+ CL + N+ +HKF RA
Sbjct: 689 GECALTAVHIINWLPSPVLSFKTPFELLYSKPPSYSYLHVFGCLAYATNVHTSHKFDYRA 748
Query: 1128 RQCVFLGYSSGQKRIHL 1178
+F+GY GQK L
Sbjct: 749 MSSIFIGYPVGQKAYKL 765
Score = 44.3 bits (103), Expect(2) = 2e-87
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 109 VQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
V LP+G I + T+ + + +VL+V FKV+++ +S+LTRGL C +TFF
Sbjct: 395 VLLPSGEKANIVTKWTLPLNSVYYLHDVLFVLTFKVDLILVSRLTRGLNCSMTFF 449
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 298 bits (762), Expect(2) = 3e-86
Identities = 153/317 (48%), Positives = 199/317 (62%), Gaps = 14/317 (4%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYL----SQKPQIHHITS----------GSTKLCH 407
FP +C+++DL T++TIGLG+ + YYL ++K +H +S ST L H
Sbjct: 480 FPYWCILQDLATRRTIGLGKQRDRLYYLVALATEKSLTNHSSSTNQPACNLAISSTDLWH 539
Query: 408 RCLGHP*ASPLQFIAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDI 587
LGH S++ C +C LAKQSRLPF S ISS KPF++IHCDI
Sbjct: 540 SRLGH-------------------SNNACPICPLAKQSRLPFGTSAISSTKPFEIIHCDI 580
Query: 588 WGPHKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLR 767
WG ++ S GA YFLTIVDD++R+TW+ LMRHK E QS++K FF++V TQ IK R
Sbjct: 581 WGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFRIKTFR 640
Query: 768 SDNGQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFW 947
SDN EF SL++F +NG IF SC YTPQQN VVERKHRH+L VARA+KF A +P +FW
Sbjct: 641 SDNXXEFTSLRSFFQDNGVIFQHSCVYTPQQNGVVERKHRHILQVARALKFHAQVPTQFW 700
Query: 948 GQHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKFHTRA 1127
G+ TA ++INR+ SP+LS KT +E HLRV+ CL + N+ +HKF RA
Sbjct: 701 GECALTAVHIINRLXSPILSFKTPFELLYLKSPXYSHLRVFGCLAYATNVHTSHKFDYRA 760
Query: 1128 RQCVFLGYSSGQKRIHL 1178
+F+GY GQK L
Sbjct: 761 MPSIFIGYPVGQKAYKL 777
Score = 50.1 bits (118), Expect(2) = 3e-86
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +1
Query: 109 VQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
V LP+G I + GT+ + + +VL VP FKV+++++S+LT+GL C VTFF
Sbjct: 426 VLLPSGEKANIVTKGTLPLNSVYYLHDVLSVPTFKVDLISVSRLTKGLNCSVTFF 480
>emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]
Length = 1114
Score = 320 bits (820), Expect = 1e-84
Identities = 158/298 (53%), Positives = 205/298 (68%)
Frame = +3
Query: 285 VMKDLTTKKTIGLGRLSNGPYYLSQKPQIHHITSGSTKLCHRCLGHP*ASPLQFIAQSIL 464
+M DLTT+ TIGLG + YYL +TS ST L HR LGH +S L F+A+ +L
Sbjct: 362 LMSDLTTRTTIGLGEQRDXLYYLVAS----QVTS-STALWHRRLGHLSSSRLNFMAKHLL 416
Query: 465 GISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGPHKIYSYSGARYFLTIV 644
F S++ CDVC LAKQ RLP VS ISS +PF+LIHCDIWGP+KI S SGA+YFLTIV
Sbjct: 417 NFPFQSNNACDVCALAKQRRLPISVSSISSVRPFELIHCDIWGPYKIASLSGAKYFLTIV 476
Query: 645 DDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDNGQEFLSLQTFLDENGT 824
DD+SR+TWV M HKSETQ ++ NFF++V+TQ +++I +R DNG EF S++ F + GT
Sbjct: 477 DDYSRFTWVFFMHHKSETQHLLVNFFSFVQTQFHVSIANIRVDNGGEFFSMREFFKQKGT 536
Query: 825 IFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQHIKTACYLINRIPSPLL 1004
+ SC YTPQQN VVERKHRH+L ARA +FQA+LPL FW + + T ++INR+P+PLL
Sbjct: 537 TYQHSCVYTPQQNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTXVHIINRLPTPLL 596
Query: 1005 SHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPNHKFHTRARQCVFLGYSSGQKRIHL 1178
S +T +E H+RV+ CL + N+ HKF RA++C+FLGY QK L
Sbjct: 597 SRQTPFERLYGKLPSYSHIRVFGCLAYATNVHVPHKFAPRAKRCIFLGYPVXQKAYKL 654
>ref|XP_009109940.1| PREDICTED: uncharacterized protein LOC103835509 [Brassica rapa]
Length = 944
Score = 254 bits (650), Expect(2) = 4e-73
Identities = 143/312 (45%), Positives = 183/312 (58%), Gaps = 8/312 (2%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYLSQKPQ-IHHITSGSTK----LCHRCLGHP*AS 434
FP C +++ + TIG G L + Y L PQ I +GS L H+ LGHP +
Sbjct: 539 FPTSCYIQEFSQGLTIGKGSLKHNLYILDLIPQDISAAFTGSLSADGMLWHQRLGHPSPA 598
Query: 435 PLQFIAQ--SILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGPHKIY 608
LQ ++ SI SH C VC LAKQ RL F + S KPFDL H DIWGP
Sbjct: 599 KLQVLSTELSIPRCIIPSHSTCTVCPLAKQKRLSFPFNNNLSLKPFDLHHLDIWGPFAQE 658
Query: 609 SYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDNGQEF 788
S G +YFLTIVDD SR TW+HL++ KS+ ++ F V TQ+N+ +K +RSDN E
Sbjct: 659 SIEGYKYFLTIVDDCSRVTWIHLLKRKSDVITLFPEFLQRVYTQYNVRVKAIRSDNAPE- 717
Query: 789 LSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQHIKTA 968
L + +G I + SC YTP+QN VVERKH+HLLNVARA+ FQ+N+PL +W I T+
Sbjct: 718 LRFAELIKTHGMIHYFSCAYTPEQNSVVERKHQHLLNVARALLFQSNVPLLYWSDCITTS 777
Query: 969 CYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINL-RPNHKFHTRARQCVFL 1145
+LINR PSPLL H+T YE LR + CLC+ L + +KF RAR C+FL
Sbjct: 778 VFLINRTPSPLLDHRTPYEVLLKRKPDYSLLRSFGCLCYVSTLQKDRNKFSPRARPCLFL 837
Query: 1146 GYSSGQKRIHLI 1181
GY SG K L+
Sbjct: 838 GYPSGYKGYKLL 849
Score = 49.7 bits (117), Expect(2) = 4e-73
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +1
Query: 106 TVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
TV LPNG +PI GTV +++ + +VL+VP+F N++++S L R C FF
Sbjct: 484 TVSLPNGTRIPILHTGTVALSDSLILYDVLHVPSFFFNLVSVSALLRSSQCSAHFF 539
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 253 bits (647), Expect(2) = 1e-72
Identities = 144/302 (47%), Positives = 184/302 (60%), Gaps = 7/302 (2%)
Frame = +3
Query: 282 CVMKDLTTKKTIGLGRLSNGPYYLS--QKPQIHHITSGSTKLCHRCLGHP*ASP---LQF 446
C ++DL + K IG+G S G Y L+ +K + + + + L H+ LGHP + F
Sbjct: 491 CFIQDLQSGKMIGMGTESEGLYCLNLPRKGTCNVVNTKTQDLWHQRLGHPSSKVSVLFPF 550
Query: 447 IAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGPHKIYSYSGAR 626
+ L +S C +C LAK +R PF +S SS+ FDLIH DIWG + + S SGA+
Sbjct: 551 LQNKTLDVS-----TCSICPLAKHTRTPFPLSVSSSDSCFDLIHVDIWGGYHVPSLSGAQ 605
Query: 627 YFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDNGQEFLSLQTF 806
YFLTIVDD SR TWV+LM HKSE +S++ +F V Q +K++RSDNG EF Q F
Sbjct: 606 YFLTIVDDHSRSTWVYLMHHKSEARSLLVHFVNLVANQFGSQVKIVRSDNGPEFKHTQ-F 664
Query: 807 LDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQHIKTACYLINR 986
G + SC TPQQN VVERKHRHLLNVARA+ FQ++LP FWG I TA YLINR
Sbjct: 665 YSSRGILHQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINR 724
Query: 987 IPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCF--TINLRPNHKFHTRARQCVFLGYSSG 1160
P+PLL KT +E HLRV+ C CF T LRP+ KF R+ + VF+GY G
Sbjct: 725 TPTPLLQGKTPFEKLFHKSPNYSHLRVFGCRCFVSTHPLRPS-KFDPRSIESVFIGYPHG 783
Query: 1161 QK 1166
QK
Sbjct: 784 QK 785
Score = 48.9 bits (115), Expect(2) = 1e-72
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = +1
Query: 52 DLGTNDGIIEIKSM-----PKHNT-VQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFK 213
D G +D I+ S P HN V+LP+G + IGTV+F + NVL VP F
Sbjct: 408 DSGASDHIVCDSSFLTSFQPVHNRIVKLPDGTSAHVSHIGTVSFSAQFVLHNVLCVPLFY 467
Query: 214 VNILAISKLTRGLGCYVTFFL 276
+N+++ISKL YVT FL
Sbjct: 468 LNLISISKLAFD-SFYVTIFL 487
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 249 bits (636), Expect(2) = 2e-70
Identities = 139/311 (44%), Positives = 182/311 (58%), Gaps = 11/311 (3%)
Frame = +3
Query: 267 IFPD-FCVMKDLTTKKTIGLGRLSNGPYYLSQKPQIHHITSGSTK------LCHRCLGHP 425
IF D CV++D T+K IG+G SNG Y+L Q+ ++ ++ K L H LGHP
Sbjct: 463 IFTDKVCVIQDRTSKMLIGVGTESNGVYHL-QRAEVVATSANVVKWKTNKALWHMRLGHP 521
Query: 426 *ASPLQFIAQSILGISFDSHD---ICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGP 596
+ L + S+ S D ICDVC AKQ+R F S + + F IH D+WGP
Sbjct: 522 SSKVLSSVLPSLEDFDSCSSDLKTICDVCVRAKQTRASFSESFNKAEECFSFIHYDVWGP 581
Query: 597 HKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDN 776
+K S GA YFLTIVDD SR W+HLM KSE S+++ F A Q N +K +RS+N
Sbjct: 582 YKHASSCGAHYFLTIVDDHSRAVWIHLMLAKSEVASLLQQFIAMASRQFNKQVKTVRSNN 641
Query: 777 GQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQH 956
G EF+SL+++ E G + SC YT QQN VERKHRH+LNVAR++ FQA LP+ FW +
Sbjct: 642 GTEFMSLKSYFAERGIVHQISCVYTHQQNGRVERKHRHILNVARSLLFQAELPISFWEES 701
Query: 957 IKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPN-HKFHTRARQ 1133
+ TA YLINR P+P+L KT Y+ LRV+ LCF KF R R+
Sbjct: 702 VLTAAYLINRTPTPILDGKTPYKILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERGRK 761
Query: 1134 CVFLGYSSGQK 1166
C+F+GY GQK
Sbjct: 762 CIFVGYPHGQK 772
Score = 46.2 bits (108), Expect(2) = 2e-70
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +1
Query: 58 GTNDGIIEIKSMPKHNTVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISK 237
G D + EI +P H+ V LPN H GT+ NM + +VL+VP+ ++++++
Sbjct: 395 GFLDLLTEIYEIP-HSVVVLPNAKHTIATKKGTLILGANMKLTHVLFVPDLSCTLISVAR 453
Query: 238 LTRGLGCYVTF 270
L R L C+ F
Sbjct: 454 LLRELHCFAIF 464
>ref|XP_010675988.1| PREDICTED: uncharacterized protein LOC104891900 [Beta vulgaris subsp.
vulgaris]
Length = 968
Score = 246 bits (628), Expect(2) = 2e-70
Identities = 125/302 (41%), Positives = 184/302 (60%), Gaps = 5/302 (1%)
Frame = +3
Query: 276 DFCVMKDLTTKKTIGLGRLSNGPYYLSQKPQIHHITSG----STKLCHRCLGHP*ASPLQ 443
D CV++D ++ IG NG YY HH++ G S +L H +GHP + +
Sbjct: 467 DVCVIQD-PSRNLIGTAVRRNGLYYFGGGSSAHHVSVGEVVPSLELWHHRMGHP-SEKIV 524
Query: 444 FIAQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGPHKIYSYSGA 623
+ +L + + C+VC AK R F +S+ +++ F+ +HCD+WGP+K S GA
Sbjct: 525 KLLPPVLHLQGSLNKGCEVCFRAKHPRTKFPISEHKASRIFEKVHCDLWGPYKHVSSCGA 584
Query: 624 RYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDNGQEFLSLQT 803
RYFLT+VDD+SR WV+L+ K+E S+ F A + Q + TIKV++SDNG EF L+
Sbjct: 585 RYFLTLVDDYSRAVWVYLLTDKTEVFSMFMAFIAMIDRQFSQTIKVVQSDNGTEFNCLKD 644
Query: 804 FLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQHIKTACYLIN 983
+ G +F SC YTPQQN VERKH+H+LNV RA++F+A+LP+ FWG+ + T +LIN
Sbjct: 645 YFTAVGILFQTSCTYTPQQNGRVERKHQHILNVGRALRFEAHLPIYFWGESVLTVAHLIN 704
Query: 984 RIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLR-PNHKFHTRARQCVFLGYSSG 1160
R P+PLL +KT YE ++V+ LCF + R KF +R+R+C+F+GY G
Sbjct: 705 RTPTPLLHNKTPYELLFGHSPSYDAIKVFGSLCFAYDHRSKGDKFASRSRKCMFVGYPLG 764
Query: 1161 QK 1166
+K
Sbjct: 765 KK 766
Score = 49.3 bits (116), Expect(2) = 2e-70
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = +1
Query: 43 ITTDLGTNDGIIEIKSMPKHNTVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNI 222
+T D+ I I P V LPNG V K G+V+ +++T+ +VL+VP+ N+
Sbjct: 393 VTGDISLLSDITCIPDCP----VGLPNGAIVMAKQEGSVHLSDSLTLTHVLFVPHLHCNL 448
Query: 223 LAISKLTRGLGCYVTF 270
L++S+LT + C + F
Sbjct: 449 LSVSQLTAAMNCVLKF 464
>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
Length = 849
Score = 244 bits (623), Expect(2) = 6e-70
Identities = 135/313 (43%), Positives = 180/313 (57%), Gaps = 14/313 (4%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYLSQ----------KPQIHHITSGSTKLCHRCLG 419
+PD C+++DL T K G G + NG YY S P + T L HR LG
Sbjct: 213 YPDHCILQDLHTVKVKGTGSMENGLYYWSHIVSPTVAYSVSPSVALSTLDDVDLWHRRLG 272
Query: 420 HP*ASPLQFIAQSILGISFDSH-DICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGP 596
H LQ I IS S C +C LAKQ+RLPF S ++ FDLIH D+WGP
Sbjct: 273 HIPHKVLQ--QMQIPHISSSSKLTSCPICPLAKQTRLPFPQSPTRADNVFDLIHADVWGP 330
Query: 597 HKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDN 776
+K ++ G RYFLT+VDD SR W+ L+++KS+ ++K+F ++ Q IK+ RSDN
Sbjct: 331 YKFPTHDGNRYFLTLVDDCSRMIWIFLLKYKSDVFIVLKDFLQLIQRQFGGYIKIFRSDN 390
Query: 777 GQEFLS--LQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWG 950
G EF + G + SC YTPQQN VVER+HR +L VARAI+FQANLP++FWG
Sbjct: 391 GTEFFNSHCSELFRTAGIVHQSSCVYTPQQNGVVERRHRQILEVARAIRFQANLPIRFWG 450
Query: 951 QHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLRPN-HKFHTRA 1127
++ A YLINRIPS LS ++ + HLRV CLC+ +N + KF TR+
Sbjct: 451 LCVQNAVYLINRIPSTALSGRSPFAVFFGKEPSLHHLRVMGCLCYAVNHHTHGDKFDTRS 510
Query: 1128 RQCVFLGYSSGQK 1166
+ V +GYS+ QK
Sbjct: 511 IKSVLMGYSTTQK 523
Score = 49.3 bits (116), Expect(2) = 6e-70
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +1
Query: 97 KHNTVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
++N V LPNG +PI G I +VLY+P+FK N+L++S+LT+ L C + F+
Sbjct: 156 EYNKVHLPNGQKIPIVFSGKSRLTLG-DISHVLYIPDFKYNLLSVSELTKELHCCMVFY 213
>ref|XP_010675539.1| PREDICTED: uncharacterized protein LOC104891530 [Beta vulgaris subsp.
vulgaris]
Length = 1011
Score = 245 bits (626), Expect(2) = 1e-69
Identities = 129/300 (43%), Positives = 182/300 (60%), Gaps = 5/300 (1%)
Frame = +3
Query: 282 CVMKDLTTKKTIGLGRLSNGPYYLSQKPQIH--HITSGSTK--LCHRCLGHP*ASPLQFI 449
C ++D K+ IG GR +G YY + +H +T S + L HR +GHP ++ +
Sbjct: 371 CAIQD-HMKELIGTGRKVDGLYYFNGDDSVHVAAVTGASAEFDLWHRRMGHPSEKVVKLL 429
Query: 450 AQSILGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGPHKIYSYSGARY 629
+ S+ C++C AK +R F +S +++ F+ IHCD+WGP++ S GARY
Sbjct: 430 PPLCGHVGSLSNKACEICFRAKHTREKFPLSDSKASRIFEKIHCDLWGPYRQVSSCGARY 489
Query: 630 FLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDNGQEFLSLQTFL 809
FLTIVDDFSR WV+LM K+E + +F A V Q + TIK+++SDNG EF L +
Sbjct: 490 FLTIVDDFSRAVWVYLMEDKTEVFGMFMSFVAMVDRQFSQTIKLVQSDNGTEFNCLLDYF 549
Query: 810 DENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQHIKTACYLINRI 989
+G IF SC TPQQN VERKH+H+LNV RA++FQANLP+ FWG+ I A +LINR
Sbjct: 550 SASGIIFQTSCVATPQQNGRVERKHQHILNVGRALRFQANLPIYFWGESILAAVHLINRT 609
Query: 990 PSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINLR-PNHKFHTRARQCVFLGYSSGQK 1166
PSPLL +K+ + +R + CLCF N + KF +R+R+CVF+GY G+K
Sbjct: 610 PSPLLQNKSPFHVLFGFPPAYAAIRTFGCLCFAHNHKTKGDKFASRSRKCVFVGYPFGKK 669
Score = 47.4 bits (111), Expect(2) = 1e-69
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +1
Query: 58 GTNDGIIEIKSMPKHNTVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISK 237
GT G+ ++ S+ V LPNG V G+V ++T+ NVL VP F ++L++++
Sbjct: 297 GTVSGMFDLVSISPC-PVGLPNGSTVVATQKGSVKLSESITLLNVLLVPQFGCSLLSVAQ 355
Query: 238 LTRGLGCYVTF 270
LT L C+V F
Sbjct: 356 LTNDLQCFVQF 366
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 249 bits (635), Expect(2) = 2e-69
Identities = 130/312 (41%), Positives = 185/312 (59%), Gaps = 12/312 (3%)
Frame = +3
Query: 282 CVMKDLTTKKTIGLGRLSNGPYYLSQKPQIHHITSGSTK--------LCHRCLGHP*ASP 437
CV++D T + +G+G+ Y + H T S L H+ LGHP
Sbjct: 359 CVLQDATRELMVGMGKQVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQK 418
Query: 438 LQFIAQSILGISFDSHDI---CDVCHLAKQSRLPFKVSQISSNKPFDLIHCDIWGPHKIY 608
LQ ++ S+L ++ C VCH++KQ LPF S++PFDLIH D WGP +
Sbjct: 419 LQPMS-SLLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNNKSSRPFDLIHIDTWGPFSVQ 477
Query: 609 SYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLRSDNGQEF 788
++ G RYFLTIVDD+SR TWV+L+R+KS+ ++I F V+ Q TIK +RSDN E
Sbjct: 478 THDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPE- 536
Query: 789 LSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFWGQHIKTA 968
L+ F G + + SCP TPQQN VVERKH+H+LNVAR++ FQ+++P+ +WG I TA
Sbjct: 537 LNFTQFYHSKGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTA 596
Query: 969 CYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCF-TINLRPNHKFHTRARQCVFL 1145
YLINR+P+P+L K +E H++V+ CLC+ + + + HKF RA+ C F+
Sbjct: 597 VYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFI 656
Query: 1146 GYSSGQKRIHLI 1181
GY SG K L+
Sbjct: 657 GYPSGFKGYKLL 668
Score = 43.1 bits (100), Expect(2) = 2e-69
Identities = 15/40 (37%), Positives = 30/40 (75%)
Frame = +1
Query: 151 GTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTF 270
G+V+ ++ +++VL++P FK N+L++S LT+ +GC + F
Sbjct: 315 GSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWF 354
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 240 bits (613), Expect(2) = 2e-69
Identities = 137/314 (43%), Positives = 177/314 (56%), Gaps = 15/314 (4%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYLSQKPQIHHITSGSTKLC-----------HRCL 416
F D +++DLT IG G+ + Y L S +K C H L
Sbjct: 522 FRDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRL 581
Query: 417 GHP*ASPLQFIAQSI---LGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDI 587
GHP + I +S S S C VC LAKQ RL F VS S PF+L+H D+
Sbjct: 582 GHPSDIRVHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDV 641
Query: 588 WGPHKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLR 767
WGP S G R+FL+IVDD+SR TWV+L++ KS+ F ++V+ Q N +IK +R
Sbjct: 642 WGPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVR 701
Query: 768 SDNGQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFW 947
SDN E L ++ + G + SCPYTPQQN +VERKH+H+LNVARA+ FQ+N+PL FW
Sbjct: 702 SDNAPE-LGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFW 760
Query: 948 GQHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINL-RPNHKFHTR 1124
G I T+ YLINR PSPLL +KT +E HLRV+ CLC+ L + HKF+ R
Sbjct: 761 GDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPR 820
Query: 1125 ARQCVFLGYSSGQK 1166
A VFLGY G K
Sbjct: 821 AMSAVFLGYPHGVK 834
Score = 51.2 bits (121), Expect(2) = 2e-69
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 106 TVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
+V LPNG + + GTV +++T+ +VL++P F N+L++S LT+ C V FF
Sbjct: 467 SVSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFF 522
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 240 bits (613), Expect(2) = 2e-69
Identities = 137/314 (43%), Positives = 177/314 (56%), Gaps = 15/314 (4%)
Frame = +3
Query: 270 FPDFCVMKDLTTKKTIGLGRLSNGPYYLSQKPQIHHITSGSTKLC-----------HRCL 416
F D +++DLT IG G+ + Y L S +K C H L
Sbjct: 491 FRDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRL 550
Query: 417 GHP*ASPLQFIAQSI---LGISFDSHDICDVCHLAKQSRLPFKVSQISSNKPFDLIHCDI 587
GHP + I +S S S C VC LAKQ RL F VS S PF+L+H D+
Sbjct: 551 GHPSDIRVHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDV 610
Query: 588 WGPHKIYSYSGARYFLTIVDDFSRYTWVHLMRHKSETQSIIKNFFAWVKTQHNLTIKVLR 767
WGP S G R+FL+IVDD+SR TWV+L++ KS+ F ++V+ Q N +IK +R
Sbjct: 611 WGPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVR 670
Query: 768 SDNGQEFLSLQTFLDENGTIFHRSCPYTPQQNRVVERKHRHLLNVARAIKFQANLPLKFW 947
SDN E L ++ + G + SCPYTPQQN +VERKH+H+LNVARA+ FQ+N+PL FW
Sbjct: 671 SDNAPE-LGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFW 729
Query: 948 GQHIKTACYLINRIPSPLLSHKTSYEXXXXXXXXXXHLRVYSCLCFTINL-RPNHKFHTR 1124
G I T+ YLINR PSPLL +KT +E HLRV+ CLC+ L + HKF+ R
Sbjct: 730 GDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPR 789
Query: 1125 ARQCVFLGYSSGQK 1166
A VFLGY G K
Sbjct: 790 AMSAVFLGYPHGVK 803
Score = 51.2 bits (121), Expect(2) = 2e-69
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 106 TVQLPNGGHVPIKSIGTVNFENNMTIDNVLYVPNFKVNILAISKLTRGLGCYVTFF 273
+V LPNG + + GTV +++T+ +VL++P F N+L++S LT+ C V FF
Sbjct: 436 SVSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFF 491