BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00026825
         (1233 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   578   e-162
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   504   e-140
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   486   e-134
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]   471   e-130
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               453   e-124
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]         432   e-118
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   430   e-117
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   430   e-117
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...   430   e-117
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     430   e-117
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc...   429   e-117
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc...   429   e-117
gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subc...   429   e-117
gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subc...   429   e-117
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     429   e-117
gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-...   429   e-117
gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japo...   429   e-117
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   429   e-117
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   429   e-117
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc...   429   e-117

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  578 bits (1490), Expect = e-162
 Identities = 274/412 (66%), Positives = 337/412 (81%), Gaps = 1/412 (0%)
 Frame = -1

Query: 1233 FKMNVLTIVPKLNKINEASTSAYIVESSCLWHNRLGHANFKSVRKLMNLNLLPSLSFDPN 1054
            +K+NV+TI+   + +N+ASTS Y++ESS LWH RLGH N+ ++R+L+NLN +P+   + N
Sbjct: 445  WKLNVMTIIK--SNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSN 502

Query: 1053 HKCETCVEAKLAKRPFPSVERNTSPLELIHSDICDLKFVQTKGGKKYFITFIDDCTRYCY 874
            HKCETCVEAKL +  F SVERNT PL+LIHSDICDLKFVQT+GG KYFITF+DD T+YCY
Sbjct: 503  HKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCY 562

Query: 873  VYLLRSKDEALEMFKHYKNEVENQLSKTIKIVRSDRGGEYGAPFEEFCSEQGIIHQTTAP 694
            VYLL+SKDEA+E F  YK EVENQL+K IK++RSDRGGEY +PF + C++ GIIH+TTAP
Sbjct: 563  VYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAP 622

Query: 693  YSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWEEAILSANHILNKIPHKVKDETPYEL 514
            YSPQSNG+AERKNRTLKEMMNAMLISS LPQN+W EAIL+AN++LNK+P K  ++TPYEL
Sbjct: 623  YSPQSNGVAERKNRTLKEMMNAMLISSSLPQNMWGEAILTANYLLNKVPKKKAEKTPYEL 682

Query: 513  WKGHKPSYKYLKVWGCLAKVEVPKPKQIKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXX 334
            WKG KPSY YL++WGCLAKV VP PK++KIGPKT+DCIFIGYAHNS+AYRFLV++S    
Sbjct: 683  WKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPD 742

Query: 333  XXXXXXXESRNASFFEHVFPRKDKIDVSVTKRTYDTANDSEN-EEEPRRSKRARKSTSFG 157
                   ESRNASFFE VFP K K + S +KR  ++ + +E  E EPRRSKR R   SFG
Sbjct: 743  IHKNTIMESRNASFFEDVFPCKSKEEPSSSKRMLESQDQNEEVEVEPRRSKRVRTEKSFG 802

Query: 156  SEFLTYMIENEPKTFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
             +FLT+M+E EP+TF EA+++ E   WKEAI SEI+SI+QNHTWELVDLPPG
Sbjct: 803  PDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPG 854


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  504 bits (1297), Expect = e-140
 Identities = 246/411 (59%), Positives = 301/411 (73%)
 Frame = -1

Query: 1233 FKMNVLTIVPKLNKINEASTSAYIVESSCLWHNRLGHANFKSVRKLMNLNLLPSLSFDPN 1054
            +K+NV+TI+   + +N+ASTS Y++ESS LWH RL H N+ ++R+L+NLN +P+   + N
Sbjct: 445  WKLNVMTIIK--SNMNKASTSTYMLESSNLWHGRLRHVNYDTLRRLINLNHIPTFQINSN 502

Query: 1053 HKCETCVEAKLAKRPFPSVERNTSPLELIHSDICDLKFVQTKGGKKYFITFIDDCTRYCY 874
            HKCETCVEAKL +  F SVERNT PL+LIHSDICDLKFVQT+GG KYFITF+DD T+YCY
Sbjct: 503  HKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCY 562

Query: 873  VYLLRSKDEALEMFKHYKNEVENQLSKTIKIVRSDRGGEYGAPFEEFCSEQGIIHQTTAP 694
            VYLL+SKDEA+E F  YK EVENQL+K IK++RSDRGGEY +PF + C++ GIIH+TT P
Sbjct: 563  VYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTTP 622

Query: 693  YSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWEEAILSANHILNKIPHKVKDETPYEL 514
            YSPQSNG+AERKNRTLKEMMNAMLIS  LPQN+W EAIL+AN++LNK+P K  ++TPYEL
Sbjct: 623  YSPQSNGVAERKNRTLKEMMNAMLISFSLPQNMWGEAILTANYLLNKVPKKKAEKTPYEL 682

Query: 513  WKGHKPSYKYLKVWGCLAKVEVPKPKQIKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXX 334
            WKG KPSY YL++WGCLAKV VP PK++KIGPKT+DCIFIGYAHNS+AYRFLV++S    
Sbjct: 683  WKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPD 742

Query: 333  XXXXXXXESRNASFFEHVFPRKDKIDVSVTKRTYDTANDSENEEEPRRSKRARKSTSFGS 154
                   ESRNASFFE VFP                                        
Sbjct: 743  IHKNTIMESRNASFFEDVFP---------------------------------------- 762

Query: 153  EFLTYMIENEPKTFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
                     EP+TF EA+++ E   WKEAI SEI+SI+QNHTWELV+LP G
Sbjct: 763  --------CEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVBLPLG 805


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  486 bits (1250), Expect = e-134
 Identities = 241/388 (62%), Positives = 285/388 (73%), Gaps = 12/388 (3%)
 Frame = -1

Query: 1233 FKMNVLTIVPKLNKINEASTSAYIVESSCLWHNRLGHANFKSVRKLMNLNLLPSLSFDPN 1054
            FKMNV+T+VPK    N+  +SAY+++SS +WH RLGH N+ ++ +L++L+ LP  + DPN
Sbjct: 572  FKMNVMTVVPKSINNNKIDSSAYLLKSSNIWHGRLGHVNYDTLCRLIHLDYLPKFNIDPN 631

Query: 1053 HKCETCVEAKLAKRPFPSVERNTSPLELIHSDICDLKFVQTKGGKKYFITFIDDCTRYCY 874
            HKCETCVE+KL K PF SVER+T PL+L HSDICDLKFVQT+GGKKYFITFIDDCTRYCY
Sbjct: 632  HKCETCVESKLTKVPFHSVERSTEPLDLFHSDICDLKFVQTRGGKKYFITFIDDCTRYCY 691

Query: 873  VYLLRSKDEALEMFKHYKNEVENQLSKTIKIVRSDRGGEYGAPFEEFCSEQGIIHQTTAP 694
            VYLL+SKDEA+EMFKHYK EVENQLSK IK +RSDRGGEY +PFEEFC E GIIHQT AP
Sbjct: 692  VYLLKSKDEAIEMFKHYKIEVENQLSKKIKAIRSDRGGEYESPFEEFCLEHGIIHQTIAP 751

Query: 693  YSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWEEAILSANHILNKIPHKVKDETPYEL 514
            YSPQSNG+AERKNRTLKEMMNAML+SS                                 
Sbjct: 752  YSPQSNGMAERKNRTLKEMMNAMLLSS--------------------------------- 778

Query: 513  WKGHKPSYKYLKVWGCLAKVEVPKPKQIKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXX 334
              GHKP YKYLKVWGCLAKVEVPKPK++KIGPKT+DCIFIGYA+NSSAYRFLV+KS    
Sbjct: 779  --GHKPCYKYLKVWGCLAKVEVPKPKKVKIGPKTIDCIFIGYANNSSAYRFLVYKSEIPD 836

Query: 333  XXXXXXXESRNASFFEHVFPRKDKIDVSVTKRTYD------------TANDSENEEEPRR 190
                   ESRNA+FFE +FP     + S  KRT+D             + + + +EEPRR
Sbjct: 837  VHVNTIIESRNAAFFETIFPYNKPSETSTQKRTHDITFGNNXLEVNQESKEKQVDEEPRR 896

Query: 189  SKRARKSTSFGSEFLTYMIENEPKTFSE 106
             KR RKSTSFG +FLTY++EN+P+TF E
Sbjct: 897  GKRXRKSTSFGPDFLTYLLENDPQTFKE 924


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score =  471 bits (1213), Expect = e-130
 Identities = 229/298 (76%), Positives = 254/298 (85%), Gaps = 1/298 (0%)
 Frame = -1

Query: 990  NTSPLELIHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEV 811
            NT P++LIHSDICDL FVQ +GGK+YFITFIDDCTRY YVYLLR KDEAL++FKHYKNEV
Sbjct: 180  NTEPMDLIHSDICDLMFVQKRGGKRYFITFIDDCTRYYYVYLLRRKDEALDVFKHYKNEV 239

Query: 810  ENQLSKTIKIVRSDRGGEYGAPFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMN 631
            ENQLSK IK ++SDRGGEY APF EFCSE GIIHQT APYSPQSN +AE KN TLKEMMN
Sbjct: 240  ENQLSKNIKAIKSDRGGEYDAPFGEFCSEHGIIHQTIAPYSPQSNSVAECKNLTLKEMMN 299

Query: 630  AMLISSGLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVE 451
            AMLISSGLPQNLW EAIL ANHILNKIPHK KD T YELWKGHKPSYKYLKVW CL KV 
Sbjct: 300  AMLISSGLPQNLWREAILFANHILNKIPHKNKDVTSYELWKGHKPSYKYLKVWECLTKVV 359

Query: 450  VPKPKQIKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPR 271
            + KPKQ+KIGPKT+DCIFIGYA+NSSAY FLVHKS           ESRNASFFE++FP 
Sbjct: 360  LQKPKQVKIGPKTIDCIFIGYANNSSAYHFLVHKSSIPDIHEDTIIESRNASFFENIFPC 419

Query: 270  KDKIDVSVTKRTYDTAN-DSENEEEPRRSKRARKSTSFGSEFLTYMIENEPKTFSEAM 100
            K+K +VS+ KRTYDTAN + +NEEEPR SKRA+K+ SFG E+LTYM++NEPKTF EAM
Sbjct: 420  KEKQEVSLNKRTYDTANGNHQNEEEPRCSKRAKKTKSFGLEYLTYMLDNEPKTFKEAM 477


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  453 bits (1165), Expect = e-124
 Identities = 229/411 (55%), Positives = 281/411 (68%)
 Frame = -1

Query: 1233 FKMNVLTIVPKLNKINEASTSAYIVESSCLWHNRLGHANFKSVRKLMNLNLLPSLSFDPN 1054
            FK+NV+ +    + IN+ S S Y++ES+ LWH RLGH N+K++RKL+ L +L     D +
Sbjct: 478  FKLNVMVV----DSINKNSASVYLLESNDLWHARLGHVNYKALRKLVTLEVLLDFKCDKS 533

Query: 1053 HKCETCVEAKLAKRPFPSVERNTSPLELIHSDICDLKFVQTKGGKKYFITFIDDCTRYCY 874
             KCE CVE                       +ICD+K   ++GGKKYFITFIDDCTR+CY
Sbjct: 534  -KCEICVE-----------------------NICDMKSTPSRGGKKYFITFIDDCTRFCY 569

Query: 873  VYLLRSKDEALEMFKHYKNEVENQLSKTIKIVRSDRGGEYGAPFEEFCSEQGIIHQTTAP 694
            VYLL SKDEA++ FK YKNEVENQL+  IK++RSDRGGEY + F E C E GIIHQTTAP
Sbjct: 570  VYLLNSKDEAIDAFKQYKNEVENQLNLKIKMIRSDRGGEYESLFAEICLEYGIIHQTTAP 629

Query: 693  YSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWEEAILSANHILNKIPHKVKDETPYEL 514
            Y+PQSNG+AERKNRTLKEMMNA++ISSG P+NLW E IL+AN ILN++P       PYEL
Sbjct: 630  YTPQSNGLAERKNRTLKEMMNALIISSGSPRNLWGETILTANKILNRVPRSKTQSIPYEL 689

Query: 513  WKGHKPSYKYLKVWGCLAKVEVPKPKQIKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXX 334
            WKG KP+ KY KVWGCLAKVEVP PK++KIGPK VDC+FIGYA NS A RFLVHKS    
Sbjct: 690  WKGRKPNLKYFKVWGCLAKVEVPLPKRVKIGPKIVDCVFIGYAVNSKACRFLVHKSD--- 746

Query: 333  XXXXXXXESRNASFFEHVFPRKDKIDVSVTKRTYDTANDSENEEEPRRSKRARKSTSFGS 154
                                   +I V+  K        ++  E+PRRS R RKSTSFG 
Sbjct: 747  ---------------------NPEIHVNTEK--------AQPNEDPRRSTRQRKSTSFGP 777

Query: 153  EFLTYMIENEPKTFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            +F+ +++ENEP TF   MS+ E+ +WKEA+NSEIESI+ NHTWEL DLPPG
Sbjct: 778  DFVAFLLENEPPTFKATMSSSESIYWKEAVNSEIESILSNHTWELADLPPG 828


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  432 bits (1112), Expect = e-118
 Identities = 207/399 (51%), Positives = 288/399 (72%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 433  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 492

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+TFIDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 493  LHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 552

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 553  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 612

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL++WGCLAKV VP  K+
Sbjct: 613  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRIWGCLAKVNVPITKK 672

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 673  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHVGTIIESRDATFFESFFPMKDTHSG 732

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 733  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 792

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 793  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 831


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  430 bits (1106), Expect = e-117
 Identities = 206/389 (52%), Positives = 285/389 (73%), Gaps = 7/389 (1%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF+++++L +++L+P        KC  CV+AK  ++PF +VE R+T+PLEL
Sbjct: 450  IWHSRLCHVNFEAIKRLSDMSLIPEYKHVKGVKCGICVQAKQPRKPFHTVEGRSTTPLEL 509

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            IHSDIC++  +  KGGK+YF+T IDD TR+CY+YLLR+KDEALE FK YK EVENQL K 
Sbjct: 510  IHSDICEMNGIIIKGGKRYFLTLIDDATRFCYIYLLRTKDEALEHFKIYKTEVENQLDKK 569

Query: 789  IKIVRSDRGGEYGAP-FEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGEY +  F+E+C E GIIH+TTAPYSPQSNG+AERKNRT+ ++ NA+L SS
Sbjct: 570  IKRLRSDRGGEYLSNLFDEYCKECGIIHETTAPYSPQSNGVAERKNRTVCDLANALLQSS 629

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            G+P   W EA+L+  ++LN++P + ++ TPYE +KG KP   +L+ WGCLAKV VP PK+
Sbjct: 630  GMPDIWWGEAVLTVCYVLNRVPPRNREATPYEGFKGRKPDLSHLRTWGCLAKVNVPLPKK 689

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDKIDV 253
             K+GPKTVDC+F+GYAHNS+AYRFLV  S           ESR+ +FFE +FP +DK  V
Sbjct: 690  RKLGPKTVDCVFLGYAHNSAAYRFLVVHSETSEIAVNVIMESRDVTFFESIFPMRDKEVV 749

Query: 252  SV--TKRTY---DTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPKTFSEAMSTPE 88
            +     RTY    + ND   + E RRSKR R   S G +++ Y+++ EP++ +EA ++P+
Sbjct: 750  APDGPSRTYSLPSSVNDQTPDLELRRSKRQRTEKSLGDDYIIYLVDEEPRSLTEAYTSPD 809

Query: 87   APFWKEAINSEIESIMQNHTWELVDLPPG 1
            A +W+EA+ SE++SI+ N TWE+ DLP G
Sbjct: 810  AEYWREAVLSEMDSIISNGTWEITDLPAG 838


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  430 bits (1106), Expect = e-117
 Identities = 207/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 394  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 453

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+TFIDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 454  LHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 513

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 514  IKRLRSDRGGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTA 573

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 574  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 633

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A FFE  FP KD    
Sbjct: 634  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDAIFFESFFPMKDTHSG 693

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 694  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 753

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 754  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 792


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  430 bits (1105), Expect = e-117
 Identities = 206/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 433  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 492

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 493  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 552

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 553  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 612

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 613  GLPKAWWREALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 672

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 673  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSG 732

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 733  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 792

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 793  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 831


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  430 bits (1105), Expect = e-117
 Identities = 206/399 (51%), Positives = 287/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 433  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 492

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+TFIDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 493  LHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 552

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIA+RKNRTL +++NAML ++
Sbjct: 553  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAKRKNRTLTDLVNAMLDTA 612

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 613  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 672

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 673  HKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSG 732

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 733  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 792

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 793  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 831


>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1468

 Score =  429 bits (1104), Expect = e-117
 Identities = 205/399 (51%), Positives = 284/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 520  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 579

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 580  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 639

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 640  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 699

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 700  GLPKTWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 759

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDKIDV 253
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 760  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSG 819

Query: 252  S---------------VTKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
            S                T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 820  SNQPSEIIPNSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGGDFTVYLVDDTPK 879

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 880  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 918


>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1235

 Score =  429 bits (1104), Expect = e-117
 Identities = 206/399 (51%), Positives = 288/399 (72%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  +VE RN +PLEL
Sbjct: 366  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAVEERNLAPLEL 425

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+TFIDD TR+CYVYLL++KDEAL+ FK YK EV+NQL + 
Sbjct: 426  LHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVKNQLDRK 485

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 486  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTT 545

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 546  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 605

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYA++S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 606  RKLGPKTVDCVFLGYAYHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSG 665

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     TK T++  ++ +  E PRRSKR + + SFG +F  Y++++ PK
Sbjct: 666  SNQPSEIIPSSITPPEQTKHTHELVSEEDVSEAPRRSKRQKTAKSFGDDFTVYLVDDTPK 725

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 726  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 764


>gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1397

 Score =  429 bits (1104), Expect = e-117
 Identities = 206/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 510  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 569

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 570  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 629

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 630  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 689

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 690  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 749

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 750  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFERFFPMKDTHSG 809

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 810  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 869

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 870  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 908


>gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  429 bits (1104), Expect = e-117
 Identities = 205/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 433  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 492

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 493  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 552

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 553  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 612

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 613  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 672

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDKIDV 253
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD  + 
Sbjct: 673  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHNG 732

Query: 252  S---------------VTKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
            S                T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 733  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 792

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA++SE++SI+ N TWE+ + P G
Sbjct: 793  SISEAYASPDADYWKEAVHSEMDSIIANGTWEVTERPYG 831


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  429 bits (1104), Expect = e-117
 Identities = 207/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 522  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 581

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 582  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 641

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 642  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 701

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN+IP++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 702  GLPKAWWGEALLTSNHVLNRIPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 761

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 762  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSG 821

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 822  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 881

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 882  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 920


>gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1393

 Score =  429 bits (1104), Expect = e-117
 Identities = 206/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 510  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 569

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 570  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 629

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 630  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 689

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 690  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 749

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 750  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFERFFPMKDTHSG 809

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 810  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 869

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 870  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 908


>gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  429 bits (1104), Expect = e-117
 Identities = 205/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 433  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 492

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 493  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 552

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 553  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 612

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 613  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 672

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDKIDV 253
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD  + 
Sbjct: 673  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHNG 732

Query: 252  S---------------VTKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
            S                T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 733  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 792

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA++SE++SI+ N TWE+ + P G
Sbjct: 793  SISEAYASPDADYWKEAVHSEMDSIIANGTWEVTERPYG 831


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  429 bits (1103), Expect = e-117
 Identities = 206/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 433  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 492

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 493  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 552

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 553  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 612

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 613  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 672

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 673  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSG 732

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 733  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 792

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 793  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 831


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  429 bits (1103), Expect = e-117
 Identities = 206/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 433  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 492

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 493  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 552

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 553  IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 612

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 613  GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 672

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 673  RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSG 732

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 733  SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 792

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 793  SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 831


>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1805

 Score =  429 bits (1103), Expect = e-117
 Identities = 206/399 (51%), Positives = 286/399 (71%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1146 LWHNRLGHANFKSVRKLMNLNLLPSLSFDPNHKCETCVEAKLAKRPFPSVE-RNTSPLEL 970
            +WH+RL H NF  + +L ++ L+P  S     KC +CV++K  ++P  + E RN +PLEL
Sbjct: 918  VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 977

Query: 969  IHSDICDLKFVQTKGGKKYFITFIDDCTRYCYVYLLRSKDEALEMFKHYKNEVENQLSKT 790
            +HSD+C++  V TKGGK+YF+T IDD TR+CYVYLL++KDEAL+ FK YK EVENQL + 
Sbjct: 978  LHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRK 1037

Query: 789  IKIVRSDRGGEYGA-PFEEFCSEQGIIHQTTAPYSPQSNGIAERKNRTLKEMMNAMLISS 613
            IK +RSDRGGE+ +  F+ FC E GIIH+ T PYSP+SNGIAERKNRTL +++NAML ++
Sbjct: 1038 IKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTA 1097

Query: 612  GLPQNLWEEAILSANHILNKIPHKVKDETPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQ 433
            GLP+  W EA+L++NH+LN++P++ KD+TPYE+W G KPS  YL+ WGCLAKV VP  K+
Sbjct: 1098 GLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKK 1157

Query: 432  IKIGPKTVDCIFIGYAHNSSAYRFLVHKSXXXXXXXXXXXESRNASFFEHVFPRKDK--- 262
             K+GPKTVDC+F+GYAH+S AYRFL+ KS           ESR+A+FFE  FP KD    
Sbjct: 1158 RKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSG 1217

Query: 261  -------IDVSV-----TKRTYDTANDSENEEEPRRSKRARKSTSFGSEFLTYMIENEPK 118
                   I  S+     T+ T++  ++ +  E PRRSKR R + SFG +F  Y++++ PK
Sbjct: 1218 SNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPK 1277

Query: 117  TFSEAMSTPEAPFWKEAINSEIESIMQNHTWELVDLPPG 1
            + SEA ++P+A +WKEA+ SE++SI+ N TWE+ + P G
Sbjct: 1278 SISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYG 1316