BLASTX nr result

ID: Forsythia22_contig00025669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00025669
         (510 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp....    70   1e-16
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    69   9e-10
gb|AFW86835.1| hypothetical protein ZEAMMB73_214691 [Zea mays]         64   5e-08

>ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp. mays]
           gi|94502700|ref|YP_588308.1| hypothetical protein
           ZeamMp046 [Zea mays subsp. mays]
           gi|40795138|gb|AAR91182.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|40795139|gb|AAR91183.1|
           hypothetical protein (mitochondrion) [Zea mays]
          Length = 99

 Score = 69.7 bits (169), Expect(2) = 1e-16
 Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
 Frame = -1

Query: 246 IKHGNKKK-KCLFDYFDRGGWRKWTKQTRISHR------TNTGKESY*KLS*PTFVEPCI 88
           IKHGNKK  KCLF +F RGGW KW KQT I         ++  ++++ + +   FV PCI
Sbjct: 4   IKHGNKKHLKCLFYHFYRGGWIKWAKQTHIFQSKRWVPFSSRQRKNHLENAPNPFVGPCI 63

Query: 87  VSDPNLPGASLP 52
           VSDPNLPGAS P
Sbjct: 64  VSDPNLPGASPP 75



 Score = 43.1 bits (100), Expect(2) = 1e-16
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -3

Query: 64  SEPPIEASEVGEPYDGQLSPA 2
           + PP+EASEVGEPYDGQLSPA
Sbjct: 72  ASPPLEASEVGEPYDGQLSPA 92


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
          Length = 1094

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 36/50 (72%), Positives = 38/50 (76%)
 Frame = -1

Query: 510  AYYYTTLHLALHIYKANPCPVPGRAKGASILTLYPHLRPG*RALLIQGGD 361
            A YYTTLH ALHIY+ANPCPVPGR KGASIL  Y  L     ALLIQGG+
Sbjct: 899  ANYYTTLHSALHIYRANPCPVPGRVKGASILIPY-SLAQANGALLIQGGE 947


>gb|AFW86835.1| hypothetical protein ZEAMMB73_214691 [Zea mays]
          Length = 77

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
 Frame = -3

Query: 190 MEKVDKTDSHFSSNKY-------RKRIILKTFLTHLRRAVYCK*SEPARSEPPIEASEVG 32
           M+KV KTDSHFS  K        +KRIILKT L                + PP+EASEVG
Sbjct: 1   MDKVGKTDSHFSIEKMGSFFVSTKKRIILKTLLNPFVGPCIVSDPNLPGASPPLEASEVG 60

Query: 31  EPYDGQLSPA 2
           EPYDGQLSPA
Sbjct: 61  EPYDGQLSPA 70


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