BLASTX nr result

ID: Forsythia22_contig00025422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00025422
         (274 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHY20334.1| cytochrome c oxidase subunit 3 (mitochondrion) (m...    47   1e-06

>gb|AHY20334.1| cytochrome c oxidase subunit 3 (mitochondrion) (mitochondrion)
           [Brassica juncea var. tumida]
          Length = 307

 Score = 47.4 bits (111), Expect(2) = 1e-06
 Identities = 21/25 (84%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
 Frame = -3

Query: 74  WG*RGG-LHTTEAKWFMIESQRHSY 3
           WG +GG LHTTE KWFMIESQRHSY
Sbjct: 27  WGVKGGGLHTTETKWFMIESQRHSY 51



 Score = 31.6 bits (70), Expect(2) = 1e-06
 Identities = 17/22 (77%), Positives = 17/22 (77%), Gaps = 3/22 (13%)
 Frame = -1

Query: 154 MKEPSLPI---C*IEIKLDPKE 98
           MKEPSLPI   C IE KLDPKE
Sbjct: 1   MKEPSLPISLSCQIERKLDPKE 22


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