BLASTX nr result

ID: Forsythia22_contig00025349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00025349
         (326 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP18743.1| unnamed protein product [Coffea canephora]             60   4e-07
ref|XP_010272730.1| PREDICTED: actin-related protein 2/3 complex...    58   3e-06
ref|XP_010272729.1| PREDICTED: actin-related protein 2/3 complex...    58   3e-06
ref|XP_009603259.1| PREDICTED: actin-related protein 2/3 complex...    57   4e-06
ref|XP_004238729.1| PREDICTED: actin-related protein 2/3 complex...    57   4e-06
ref|XP_006448017.1| hypothetical protein CICLE_v10015615mg [Citr...    57   5e-06
ref|XP_011033728.1| PREDICTED: actin-related protein 2/3 complex...    57   6e-06
ref|XP_011033727.1| PREDICTED: actin-related protein 2/3 complex...    57   6e-06
ref|XP_010273478.1| PREDICTED: actin-related protein 2/3 complex...    57   6e-06
ref|XP_002525890.1| WD-repeat protein, putative [Ricinus communi...    57   6e-06
ref|XP_002321070.1| putative ARP2/3 protein complex subunit p41 ...    57   6e-06
ref|XP_006357213.1| PREDICTED: actin-related protein 2/3 complex...    57   6e-06
ref|XP_007048784.1| Actin-related protein C1B isoform 2, partial...    57   6e-06
ref|XP_007048783.1| Actin-related protein C1A isoform 1 [Theobro...    57   6e-06
ref|XP_002282499.1| PREDICTED: actin-related protein 2/3 complex...    57   6e-06
ref|XP_009785144.1| PREDICTED: actin-related protein 2/3 complex...    56   8e-06
ref|XP_006448016.1| hypothetical protein CICLE_v10015615mg [Citr...    56   8e-06

>emb|CDP18743.1| unnamed protein product [Coffea canephora]
          Length = 378

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSFCWAFG+KWSPSGNT AYVG
Sbjct: 196 QIVQLDLSFCWAFGVKWSPSGNTLAYVG 223


>ref|XP_010272730.1| PREDICTED: actin-related protein 2/3 complex subunit 1A-like
           isoform X2 [Nelumbo nucifera]
          Length = 345

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           +I+Q+DLSFCW FG+KWSPSGNT AYVG
Sbjct: 173 EIIQLDLSFCWTFGVKWSPSGNTLAYVG 200


>ref|XP_010272729.1| PREDICTED: actin-related protein 2/3 complex subunit 1A-like
           isoform X1 [Nelumbo nucifera]
          Length = 368

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           +I+Q+DLSFCW FG+KWSPSGNT AYVG
Sbjct: 196 EIIQLDLSFCWTFGVKWSPSGNTLAYVG 223


>ref|XP_009603259.1| PREDICTED: actin-related protein 2/3 complex subunit 1A-like
           isoform X1 [Nicotiana tomentosiformis]
          Length = 325

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DL FCWAFG++WSPSGNT AYVG
Sbjct: 147 QIVQLDLCFCWAFGVRWSPSGNTLAYVG 174


>ref|XP_004238729.1| PREDICTED: actin-related protein 2/3 complex subunit 1A-like
           [Solanum lycopersicum] gi|723697137|ref|XP_010320633.1|
           PREDICTED: actin-related protein 2/3 complex subunit
           1A-like [Solanum lycopersicum]
          Length = 375

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DL FCWAFG++WSPSGNT AYVG
Sbjct: 196 QIVQLDLCFCWAFGVRWSPSGNTLAYVG 223


>ref|XP_006448017.1| hypothetical protein CICLE_v10015615mg [Citrus clementina]
           gi|568878550|ref|XP_006492252.1| PREDICTED:
           actin-related protein 2/3 complex subunit 1A-like
           [Citrus sinensis] gi|557550628|gb|ESR61257.1|
           hypothetical protein CICLE_v10015615mg [Citrus
           clementina] gi|641839676|gb|KDO58603.1| hypothetical
           protein CISIN_1g016982mg [Citrus sinensis]
          Length = 379

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSF WAFG+KWSPSGNT AYVG
Sbjct: 196 QILQLDLSFSWAFGVKWSPSGNTLAYVG 223


>ref|XP_011033728.1| PREDICTED: actin-related protein 2/3 complex subunit 1B-like
           isoform X2 [Populus euphratica]
          Length = 312

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSF WAFG+KWSPSGNT AYVG
Sbjct: 196 QIVQLDLSFSWAFGVKWSPSGNTLAYVG 223


>ref|XP_011033727.1| PREDICTED: actin-related protein 2/3 complex subunit 1A-like
           isoform X1 [Populus euphratica]
          Length = 378

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSF WAFG+KWSPSGNT AYVG
Sbjct: 196 QIVQLDLSFSWAFGVKWSPSGNTLAYVG 223


>ref|XP_010273478.1| PREDICTED: actin-related protein 2/3 complex subunit 1A [Nelumbo
           nucifera]
          Length = 378

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSF WAFG+KWSPSGNT AYVG
Sbjct: 196 QIVQLDLSFSWAFGVKWSPSGNTLAYVG 223


>ref|XP_002525890.1| WD-repeat protein, putative [Ricinus communis]
           gi|223534804|gb|EEF36494.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 386

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSF WAFG+KWSPSGNT AYVG
Sbjct: 197 QIIQLDLSFSWAFGVKWSPSGNTLAYVG 224


>ref|XP_002321070.1| putative ARP2/3 protein complex subunit p41 [Populus trichocarpa]
           gi|222861843|gb|EEE99385.1| putative ARP2/3 protein
           complex subunit p41 [Populus trichocarpa]
          Length = 378

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSF WAFG+KWSPSGNT AYVG
Sbjct: 196 QIVQLDLSFSWAFGVKWSPSGNTLAYVG 223


>ref|XP_006357213.1| PREDICTED: actin-related protein 2/3 complex subunit 1A-like
           [Solanum tuberosum]
          Length = 374

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DL FCWAFG+ WSPSGNT AYVG
Sbjct: 196 QIVQLDLCFCWAFGVSWSPSGNTLAYVG 223


>ref|XP_007048784.1| Actin-related protein C1B isoform 2, partial [Theobroma cacao]
           gi|508701045|gb|EOX92941.1| Actin-related protein C1B
           isoform 2, partial [Theobroma cacao]
          Length = 263

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSF WAFG+KWSPSGNT AYVG
Sbjct: 196 QIVQLDLSFSWAFGVKWSPSGNTLAYVG 223


>ref|XP_007048783.1| Actin-related protein C1A isoform 1 [Theobroma cacao]
           gi|508701044|gb|EOX92940.1| Actin-related protein C1A
           isoform 1 [Theobroma cacao]
          Length = 377

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSF WAFG+KWSPSGNT AYVG
Sbjct: 196 QIVQLDLSFSWAFGVKWSPSGNTLAYVG 223


>ref|XP_002282499.1| PREDICTED: actin-related protein 2/3 complex subunit 1A [Vitis
           vinifera] gi|731409121|ref|XP_010657081.1| PREDICTED:
           actin-related protein 2/3 complex subunit 1A [Vitis
           vinifera] gi|302143485|emb|CBI22046.3| unnamed protein
           product [Vitis vinifera]
          Length = 378

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DLSF WAFG+KWSPSGNT AYVG
Sbjct: 196 QIVQLDLSFSWAFGVKWSPSGNTLAYVG 223


>ref|XP_009785144.1| PREDICTED: actin-related protein 2/3 complex subunit 1A-like
           isoform X1 [Nicotiana sylvestris]
          Length = 374

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVG 241
           QI+Q+DL FCWAFG++WSPSGNT +YVG
Sbjct: 196 QIVQLDLCFCWAFGVRWSPSGNTLSYVG 223


>ref|XP_006448016.1| hypothetical protein CICLE_v10015615mg [Citrus clementina]
           gi|557550627|gb|ESR61256.1| hypothetical protein
           CICLE_v10015615mg [Citrus clementina]
          Length = 326

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
 Frame = -3

Query: 324 QIMQIDLSFCWAFGIKWSPSGNTFAYVGQKFI-TMLRF 214
           QI+Q+DLSF WAFG+KWSPSGNT AYV +  I T ++F
Sbjct: 196 QILQLDLSFSWAFGVKWSPSGNTLAYVDETGIWTFIKF 233


Top