BLASTX nr result
ID: Forsythia22_contig00025152
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00025152
(2392 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 404 0.0
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 285 e-102
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 274 1e-91
gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposo... 278 2e-88
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] 278 1e-87
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 260 3e-84
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 260 2e-83
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei... 260 2e-83
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei... 260 2e-83
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 255 3e-83
ref|XP_010692480.1| PREDICTED: uncharacterized protein LOC104905... 249 2e-81
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo... 237 4e-77
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 267 6e-76
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 249 7e-76
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 228 2e-75
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 246 2e-75
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera] 239 3e-75
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 255 6e-74
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 232 2e-72
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 224 2e-72
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 404 bits (1039), Expect(2) = 0.0
Identities = 231/484 (47%), Positives = 302/484 (62%), Gaps = 10/484 (2%)
Frame = +2
Query: 965 FSLRTISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLL 1144
F L SS S F+LIHVDI GGYH PSL+GA+YFLTIV++++RSTWVYL+ HK + R+LL
Sbjct: 574 FPLSVSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIVDDHSRSTWVYLMHHKSEARSLL 633
Query: 1145 NNFIHLVETQFDKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHS 1321
+F++LV QF +VKIVRSDNGPE FY S+ I+HQTSC+NT Q NGVVE K+RH
Sbjct: 634 VHFVNLVANQFGSQVKIVRSDNGPEFKHTQFYSSRGILHQTSCINTPQQNGVVERKHRHL 693
Query: 1322 LNVARAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPL-KRFSKNHQITLIYEYL 1498
LNVARA+LFQ++LPK F G+AILT+AYLIN+TP + K P K F K+ + + +
Sbjct: 694 LNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKSPNYSHLRVFG 753
Query: 1499 VVCVSHLPTSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQ 1678
C +P+KFDPR+ + +F+GYPH QKGY+VY+L + K +SRDV FFE FP+Q
Sbjct: 754 CRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYSLKDKKXLISRDVTFFETEFPYQ 813
Query: 1679 SNPHLTSQT----GVSIVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQ 1846
+ TS + S+ QTP DI+ SF++S N P+ +S+ + Q
Sbjct: 814 NXLSTTSPSLDTFFPSLPQTP------DIDDDHISFNHSG----SNLQPSATSSVDXHPQ 863
Query: 1847 HXXXXXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPS 2026
TKTPT LQ+FH+EAALPS
Sbjct: 864 PTLDNSHSSSHVDPPSSPPSLNTSPPVISQPSPSQPRRSSRPTKTPTTLQDFHIEAALPS 923
Query: 2027 RTAPSTPLTQ----STVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXRE 2194
R P + ++ T+HSLS VLSY+RL+ HKAFT I++ KEP RE
Sbjct: 924 RPVPPSSTSEVAHSGTIHSLSQVLSYDRLSPMHKAFTVKITLAKEPRSFSQAVLDSRWRE 983
Query: 2195 AIHNKIQALQENNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKR 2374
A++ +IQALQ N TWSLVPL SHK+P KWVYK+K NP+GTI+ YKA LVAKG+SQV+
Sbjct: 984 AMNTEIQALQANKTWSLVPLPSHKKPIGCKWVYKIKYNPDGTIERYKARLVAKGFSQVEG 1043
Query: 2375 VDYK 2386
+DY+
Sbjct: 1044 IDYR 1047
Score = 270 bits (689), Expect(2) = 0.0
Identities = 138/276 (50%), Positives = 175/276 (63%), Gaps = 20/276 (7%)
Frame = +1
Query: 160 QAHFKCNFCGRKGHTYDYCRRRKAAMEGEHENSKGNHVTSMHDKRFDRNNFLFSQEECKE 339
+AH KC +CG KGHTYDYCRRRK M G SK NH ++++ + D NF SQ EC++
Sbjct: 285 RAHLKCTYCGGKGHTYDYCRRRKNTMGGGQGRSKVNHAATLNEGKEDVTNFPLSQSECQQ 344
Query: 340 LVELLSKNKATKVNHA--------------------GNVSNYDEVSGKAFSITQNGKKNV 459
++ LLSK K +H+ GNV NY+E+SG+ F+++++ K +
Sbjct: 345 MMGLLSKIKTAATSHSDGHQMLEMLHATKQASANLVGNVPNYEELSGRVFALSRDIKDTM 404
Query: 460 WILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYML 639
WILDSGASDHIV S T +PVHNR VKLP+ T+A V+HI V F+ F+LHNVL +
Sbjct: 405 WILDSGASDHIVCDSSFLTSFQPVHNRIVKLPDGTSAHVSHIGTVSFSAQFVLHNVLCVP 464
Query: 640 FFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGTCNP 819
FYLNLISI+KLA DSFY+TIFLR CFIQDL+S LYCLN +KGTCN
Sbjct: 465 LFYLNLISISKLAFDSFYVTIFLRQVCFIQDLQSGKMIGMGTESEGLYCLNLPRKGTCNV 524
Query: 820 VHRQTPKLWHQRLGHLLPKFHCYFPFLQINPVMKIS 927
V+ +T LWHQRLGH K FPFLQ N + +S
Sbjct: 525 VNTKTQDLWHQRLGHPSSKVSVLFPFLQ-NKTLDVS 559
Score = 70.1 bits (170), Expect = 8e-09
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +2
Query: 2 RHEKQTGVSNGKTIVQLEATAFAVKKGGRNSDAGKFEVRCEKCNMTNHRTKNCRPTSSVI 181
RHEKQ SNGK V EA+AF+V+K ++ + + EV+CEKCNMTNH TKNCR
Sbjct: 232 RHEKQAEASNGKVAVPNEASAFSVRKLDQDPNTTEREVKCEKCNMTNHSTKNCRAHLKCT 291
Query: 182 FVG 190
+ G
Sbjct: 292 YCG 294
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 285 bits (730), Expect(4) = e-102
Identities = 179/490 (36%), Positives = 267/490 (54%), Gaps = 16/490 (3%)
Frame = +2
Query: 965 FSLRTISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLL 1144
F +I++ F+L+H D+ G + P+ TG++YFLTIV++++R TW++L+ HK +T++LL
Sbjct: 813 FPKSSITTKFPFSLLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWIFLMHHKSETQSLL 872
Query: 1145 NNFIHLVETQFDKKVKIVRSDNGPE-VTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRH 1318
NF+ V+TQF V+ VR DNG E + L F +K I QTSC+ T Q NGVVE K+RH
Sbjct: 873 TNFVQFVKTQFHTDVQTVRMDNGTEFIPLRIFLQNKGIELQTSCIYTPQQNGVVERKHRH 932
Query: 1319 SLNVARAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSKNHQITLIYEYL 1498
LNVAR+++FQ+N+P F G +LT+ YLIN+ P K P + N +L + +
Sbjct: 933 ILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFE-VLYNRPPSLTHLRV 991
Query: 1499 VVCVSHLPTSKP-TKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPF 1675
C ++ P KFDPRA+ C+FLGYPH +KGY+V +L K+ VSRDV F E+ FPF
Sbjct: 992 FGCECYVTNVHPKQKFDPRASICVFLGYPHGKKGYKVLDLQTQKISVSRDVFFRENIFPF 1051
Query: 1676 QSNPHLTSQTGVSIVQTPTPSHSFDIEPLVSS---FSNSRVPPLE-----NTPPNLSSAT 1831
S+ + Q S+ P P SFD P S FS S PPL ++PP+ ++
Sbjct: 1052 HSSSSQSQQHSPSL-PLPLPI-SFDSTPQPISLPRFSPSSTPPLSHHNPVSSPPSSNTDV 1109
Query: 1832 NSSSQHXXXXXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQ----- 1996
H + L ++ +Q
Sbjct: 1110 PEPLSH-ESVASPLPSSPSPSSLSSPPSVPLVPSNTSAPSPTHEPPLRRSTRHIQPPAWH 1168
Query: 1997 EFHVEAALPSRTAPSTPLTQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXX 2176
+V +A + ++ + Q T + LS LS+ R + +H+AF ++ Q EP
Sbjct: 1169 HDYVMSAQLNHSSTQSSSRQGTRYPLSSHLSFFRFSPHHRAFLALLTAQTEPSSFEQADC 1228
Query: 2177 XXXXREAIHNKIQALQENNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKG 2356
R+A+ ++QAL+ NNTW +VPL +P +WVYK+K + +GTI+ YKA LVAKG
Sbjct: 1229 DPRWRQAMSTELQALERNNTWEMVPLPPGHKPIGCRWVYKIKYHSDGTIERYKARLVAKG 1288
Query: 2357 YSQVKRVDYK 2386
Y+QV +DY+
Sbjct: 1289 YTQVAGIDYQ 1298
Score = 103 bits (258), Expect(4) = e-102
Identities = 74/245 (30%), Positives = 107/245 (43%), Gaps = 13/245 (5%)
Frame = +1
Query: 169 FKCNFCGRKGHTYDYCRRRKAA------MEGEHENSKGNHVTS-------MHDKRFDRNN 309
F C FC ++GHT D CR + + G+ +GN ++ M D
Sbjct: 554 FHCKFCDKRGHTEDRCRLKNGSNNKTGQFRGQRPFGRGNQPSANATESQEMSDSTSSSTV 613
Query: 310 FLFSQEECKELVELLSKNKATKVNHAGNVSNYDEVSGKAFSITQNGKKNVWILDSGASDH 489
F+ E+ ++L + + +A +++GN+ Y +G A+DH
Sbjct: 614 QGFTTEQIQQLAQAI---RALNHSNSGNIDAYANAAG-------------------ATDH 651
Query: 490 IVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYMLFFYLNLISIT 669
IV SLFT LKP + V LPN + +TH V+F L +VL + F LNLIS +
Sbjct: 652 IVSHMSLFTDLKPSNVTTVNLPNGVASPITHTGTVIFDSQLTLKDVLCVPSFNLNLISAS 711
Query: 670 KLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGTCNPVHRQTPKLWH 849
KLA D IF +C +QDL S LY ++P + Q LWH
Sbjct: 712 KLAKDQNCYIIFFPDYCILQDLVSGKMIGSGKQRGGLYYMHPSTNKSVVFHVSQPSDLWH 771
Query: 850 QRLGH 864
RLGH
Sbjct: 772 LRLGH 776
Score = 34.7 bits (78), Expect(4) = e-102
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 921 NQCPICPLAKQTRMSFP 971
N CPICP AKQTR+ FP
Sbjct: 798 NHCPICPQAKQTRLPFP 814
Score = 21.6 bits (44), Expect(4) = e-102
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = +2
Query: 119 CEKCNMTNHRTKNCR 163
C+ CN + H CR
Sbjct: 536 CDHCNRSGHTIDECR 550
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 274 bits (701), Expect(3) = 1e-91
Identities = 175/475 (36%), Positives = 256/475 (53%), Gaps = 6/475 (1%)
Frame = +2
Query: 980 ISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIH 1159
ISS + F+LIH DI G + S +GA YFLTIV+++TR TW++L+ K +T+ +L +FI
Sbjct: 587 ISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYTWIHLMSFKSETQGILQSFIS 646
Query: 1160 LVETQFDKKVKIVRSDNGPEVTLEHFYL-SKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVA 1333
VETQF++ +K +R+DNG E++ YL +K I + SC T Q NGVVE K+RH LNV
Sbjct: 647 WVETQFNRCIKTLRTDNGTEISSMKQYLDTKGINYHHSCAYTPQQNGVVERKHRHLLNVG 706
Query: 1334 RAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLK----RFSKNHQITLIYEYLV 1501
RA+ FQANLP +F G +I T+ YLIN+ P K P + + H + + L
Sbjct: 707 RALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLR-TFGCLC 765
Query: 1502 VCVSHLPTSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQS 1681
+ LPT KFD RA +C+F+GYP QKGYRVY+L NK F S DVVF E FPF +
Sbjct: 766 YATNLLPTH---KFDQRARRCIFVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEHIFPFHT 822
Query: 1682 NPHLTSQTGVSIVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXXX 1861
NP + +V P P S+ EP+ + + P ++ PP L S+ S+S
Sbjct: 823 NP---QEEQHDVVVLPLPQTSY--EPITTETTK---PQADDQPPPLLSSLESTSNERTL- 873
Query: 1862 XXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPS 2041
+ + L+ FH+ ++ S
Sbjct: 874 ------------------XLDTIVSPPPPTTRRSDRIKQPNVHLRNFHLYHTAKVASSQS 915
Query: 2042 TPLTQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQAL 2221
+ L+ T H L+ +SY +L+ ++ F I+ EP +EA+ ++ AL
Sbjct: 916 SSLS-GTRHPLTRYISYAQLSPKYRNFVCAITTLVEPTTYEQAVLDPKWQEAMAAELHAL 974
Query: 2222 QENNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDYK 2386
++N+TW+L PL +P KWVYK+K N +GT++ YKA LVAKG++Q + +DYK
Sbjct: 975 EQNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYK 1029
Score = 80.9 bits (198), Expect(3) = 1e-91
Identities = 63/249 (25%), Positives = 96/249 (38%), Gaps = 19/249 (7%)
Frame = +1
Query: 175 CNFCGRKGHTYDYCR-----------RRKAAMEGEHENSKGNHVTSMHDKRFDRNNFLF- 318
C++C R H+ + C K +S N+V +K + L
Sbjct: 298 CSYCDRDYHSIEKCYYLHGFPIGHKLHGKNVKPPNQRHSNANNVKVETNKAVETEAKLLP 357
Query: 319 -------SQEECKELVELLSKNKATKVNHAGNVSNYDEVSGKAFSITQNGKKNVWILDSG 477
+ EE +L+ ++ KN H N + + S K + WI+DSG
Sbjct: 358 TNDGPRLTTEEYNQLMAMIRKNNGGNSQHFANATGINMSSSKIIPNCPHSNM-CWIIDSG 416
Query: 478 ASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYMLFFYLNL 657
A+DH+ + L + LPN A + I + T H L +VL + F +NL
Sbjct: 417 ATDHVTSSAELLDPKNLPKTTTISLPNGGQAHIESIGSLHVTPHIKLDDVLKVPQFQVNL 476
Query: 658 ISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGTCNPVHRQTP 837
+S++KL I +F FC +QD + LY L Q +
Sbjct: 477 LSVSKLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNGLYYLAQDQNPALAYAIHKHS 536
Query: 838 KLWHQRLGH 864
LWHQRLGH
Sbjct: 537 DLWHQRLGH 545
Score = 33.9 bits (76), Expect(3) = 1e-91
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3
Query: 915 NENQCPICPLAKQTRMSFP 971
+++ C ICPLAKQTR+SFP
Sbjct: 565 SKHVCDICPLAKQTRLSFP 583
>gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1311
Score = 278 bits (711), Expect(2) = 2e-88
Identities = 175/475 (36%), Positives = 251/475 (52%), Gaps = 2/475 (0%)
Frame = +2
Query: 965 FSLRTISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLL 1144
FS T + F L+HVDI G +PS+ G KYFLTIV++++R TWV+L+ K +TR+++
Sbjct: 446 FSSSTSHASHIFYLLHVDIWGPCSKPSMHGHKYFLTIVDDHSRFTWVHLMHTKAETRDII 505
Query: 1145 NNFIHLVETQFDKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHS 1321
NFI VETQ++KK+K +RSDNG E + FY SK I+HQT+CV T + NG+ E K++H
Sbjct: 506 VNFIASVETQYNKKIKKIRSDNGYEFLMPSFYASKGIMHQTTCVETPEQNGIAERKHQHL 565
Query: 1322 LNVARAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSKN-HQITLIYEYL 1498
LNV RA+LFQANLP F A+L + YL+N P F P ++ + +I+ + +
Sbjct: 566 LNVTRALLFQANLPSNFWCYALLHATYLVNCIPTPFLHNVSPYEKLHGHLPEISHLRVFG 625
Query: 1499 VVCVSHLPTSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQ 1678
+C + + K DPRA C+F+G+ S KGY VYNL + + SR+VVF+ED F
Sbjct: 626 CLCYASTLKANRKKLDPRAHPCIFIGFKASTKGYLVYNLHLHSIITSRNVVFYEDHF--- 682
Query: 1679 SNPHLTSQTGVSIVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXX 1858
S + SH L SF+ S P+ PP ++ H
Sbjct: 683 -----------SQIPETQSSHPESSTILPKSFNISPHDPIIEKPP--QPVIQETTDHTPL 729
Query: 1859 XXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAP 2038
R PT+LQ++H S ++
Sbjct: 730 QLTSTDESAFSQRTKHEPR--------------RSTRPKHAPTYLQDYH-----HSLSSH 770
Query: 2039 STPLTQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQA 2218
T ++ S+ + LS VLSY+RL+H HK F +IS EP +A+ ++QA
Sbjct: 771 DTKVSTSSRYPLSSVLSYSRLSHTHKHFVMSISSTVEPSSYAEASQYDCWIKAMEAELQA 830
Query: 2219 LQENNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
LQ NNTW L L HK +WVYK+K +G+I+ YKA LVAKGY+Q++ +DY
Sbjct: 831 LQSNNTWKLTLLPPHKTAIGCRWVYKIKHRADGSIERYKARLVAKGYTQMEGLDY 885
Score = 78.6 bits (192), Expect(2) = 2e-88
Identities = 74/263 (28%), Positives = 100/263 (38%), Gaps = 8/263 (3%)
Frame = +1
Query: 175 CNFCGRKGHTYDYCRRRKAAMEGEHENSKGNHVTSMHDKRFDRNNFLFSQEECKELVELL 354
CN+CGR GHT + C + K M HE RN ++ C
Sbjct: 219 CNYCGRIGHTENICYK-KHGMPLNHET---------------RNKGTSGRKSC------- 255
Query: 355 SKNKATKVNHAGNVSNYDEVSGKAFSITQNGKKNVWILDSGASDHIVYAPSLFTFLKPVH 534
H G ++ + WILDS A+DH+ + S + ++
Sbjct: 256 --------THCGTFQSFT---------------SPWILDSRATDHVTCSLSNLHSYECIN 292
Query: 535 NRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYMLFFYLNLISITKLALDSFYITIFLRH 714
VKLPN TH V + L NVLYM F NLISI+KL + IF
Sbjct: 293 PVPVKLPNGHQVHATHSGIVHLSKSITLFNVLYMPAFTFNLISISKLVSSTHCALIFSST 352
Query: 715 FCFIQDLRSXXXXXXXXXXXXLYCLNPMQ--KGTCNPVHRQTPK-----LWHQRLGHL-L 870
C +QD + LY L P Q K C+ + K LWH R+GHL
Sbjct: 353 SCMLQDASTRTKIGIVEEKHGLYHLIPDQVNKVICSTIIHPKCKIIPIDLWHFRMGHLST 412
Query: 871 PKFHCYFPFLQINPVMKISVLFV 939
+ C P P+++ FV
Sbjct: 413 ERLQCMKPHY---PILRNDKTFV 432
>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
Length = 1039
Score = 278 bits (710), Expect(3) = 1e-87
Identities = 176/475 (37%), Positives = 258/475 (54%), Gaps = 6/475 (1%)
Frame = +2
Query: 980 ISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIH 1159
ISS + F+LIH DI G + S +GA+YFLTIV+++TR TW++L+ K +T+ +L +FI
Sbjct: 179 ISSHAPFDLIHCDIWGPHRINSHSGARYFLTIVDDHTRYTWIHLMSFKSETQGILQSFIS 238
Query: 1160 LVETQFDKKVKIVRSDNGPEVTLEHFYL-SKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVA 1333
VETQF++ +K +R+DNG E++ YL +K I + SC T Q NGVVE K+RH LNV
Sbjct: 239 WVETQFNRCIKTLRTDNGTEISSMKQYLDTKGINYHHSCAYTPQQNGVVERKHRHLLNVG 298
Query: 1334 RAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLK----RFSKNHQITLIYEYLV 1501
RA+ FQANLP +F G +I T+ YLIN+ P K P + + H + + L
Sbjct: 299 RALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLR-TFGCLC 357
Query: 1502 VCVSHLPTSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQS 1681
+ LPT KFD RA +C+F+GYP QKGYRVY+L NK F S DVVF E FPF +
Sbjct: 358 YATNLLPTH---KFDQRARRCIFVGYPLGQKGYRVYDLETNKFFSSXDVVFHEHIFPFHT 414
Query: 1682 NPHLTSQTGVSIVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXXX 1861
NP + +V P P S+ EP+ + + P ++ PP L S+ S+S
Sbjct: 415 NP---QEEQHDVVVLPLPQTSY--EPITTETTK---PQADDQPPPLLSSLESTSNERTLD 466
Query: 1862 XXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPS 2041
+ + L+ FH+ ++ S
Sbjct: 467 -------------------LDTIVSPPPPATRRSDRIKQPNVXLRNFHLYHTAKVXSSQS 507
Query: 2042 TPLTQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQAL 2221
+ L+ T H L+ +SY +L+ ++ F I+ EP +EA+ ++ AL
Sbjct: 508 SSLS-GTRHPLTRYISYAQLSPKYRNFVCAITTLVEPTTYEQAVLDPKWQEAMAAELHAL 566
Query: 2222 QENNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDYK 2386
++N+TW+L PL S +P KWVYK+K N +GT++ YKA LVAKG++Q + +DYK
Sbjct: 567 EQNHTWTLTPLPSGHRPIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYK 621
Score = 67.4 bits (163), Expect(3) = 1e-87
Identities = 43/135 (31%), Positives = 61/135 (45%)
Frame = +1
Query: 460 WILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYML 639
WI+DSGA+DH+ + L + LP+ A + I + T H L +VL +
Sbjct: 3 WIIDSGATDHVTSSAELLDPKILPKTTTISLPDGGQAHIESIGSLHVTPHIKLDDVLKVP 62
Query: 640 FFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGTCNP 819
F +NL+S++KL I +F FC +QD + LY L Q
Sbjct: 63 QFQVNLLSVSKLTRALQCIVMFXSDFCVVQDATTRKTXGLGKQHNGLYYLAQDQNPALAY 122
Query: 820 VHRQTPKLWHQRLGH 864
+ LWHQRLGH
Sbjct: 123 AIHKHSDLWHQRLGH 137
Score = 30.0 bits (66), Expect(3) = 1e-87
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 915 NENQCPICPLAKQTRMSFP 971
+++ C I PLAKQTR+SFP
Sbjct: 157 SKHVCDIXPLAKQTRLSFP 175
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 260 bits (665), Expect(3) = 3e-84
Identities = 164/465 (35%), Positives = 240/465 (51%), Gaps = 3/465 (0%)
Frame = +2
Query: 998 FNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIHLVETQF 1177
F L+HVD+ G E S G ++FL+IV++Y+R TWVYL+K K F+ VE QF
Sbjct: 603 FELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQF 662
Query: 1178 DKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVARAILFQA 1354
+ +K VRSDN PE+ + + K I+HQ SC T Q N +VE K++H LNVARA+LFQ+
Sbjct: 663 NASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQS 722
Query: 1355 NLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSK-NHQITLIYEYLVVCVSHLPTSK 1531
N+P F G+ ILTS YLIN+TP + K P + + + + + + +C T
Sbjct: 723 NVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKD 782
Query: 1532 PTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQSNPHLTSQTGV 1711
KF+PRA +FLGYPH KGY+V +L N V +SR+VVF E TFPF+S P SQ +
Sbjct: 783 RHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ--SQPAL 840
Query: 1712 S-IVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXXXXXXXXXXXX 1888
Q+ +P I P S S++ P + P + S+ SS
Sbjct: 841 DPFPQSVSPFFYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETD------------- 887
Query: 1889 XXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPSTPLTQSTVH 2068
+KTP +L ++H + T P+T +
Sbjct: 888 ----------SSGFVTSSSAHVTRPQRQSKTPAYLSDYHCYLISHNSTPHPNPVTP---Y 934
Query: 2069 SLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQENNTWSLV 2248
LS L+Y+ L+ +++ F I+ EP R+A+ +++AL NTWS+
Sbjct: 935 PLSACLTYDLLSPSYRTFALNITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSIC 994
Query: 2249 PLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
L K KWV+K K N +G+I+ +KA LVAKGY+Q++ VD+
Sbjct: 995 TLPDGKNAVGCKWVFKTKYNADGSIERHKARLVAKGYTQLEGVDF 1039
Score = 69.7 bits (169), Expect(3) = 3e-84
Identities = 64/251 (25%), Positives = 98/251 (39%), Gaps = 21/251 (8%)
Frame = +1
Query: 175 CNFCGRKGHTYDYCRRRKAAMEGEHENSKGNHVTSMHDKRFDRNNFLFSQEECKELV-EL 351
C CG GH C R G + N + R + +Q + L+ +L
Sbjct: 304 CTHCGMTGHVVSRCFRLHGYPPGHKSHPNWNSRSG--PPRPKSQSLEKAQNQVHSLLSQL 361
Query: 352 LSKNK-----ATKVNHAGNVSNYDEVSGKAFSITQNGKKN------VWILDSGASDHIVY 498
LS++K + N A +S + + N VWILD+GAS H+
Sbjct: 362 LSQHKGQGSVSLDSNFAVPSPPSPGISLVTYPLLTTSPSNITFPTAVWILDTGASTHVCC 421
Query: 499 APSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYMLFFYLNLISITKLA 678
LF+ + + V LPN ++ +VT V+ + L +VL++ F+ NL+S++ L
Sbjct: 422 NLGLFSEVHDIPVVSVSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLSVSCLT 481
Query: 679 LDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGT---------CNPVHRQ 831
+ F R IQDL LY L + + C +
Sbjct: 482 QQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSAT 541
Query: 832 TPKLWHQRLGH 864
T LWH RLGH
Sbjct: 542 TFDLWHHRLGH 552
Score = 33.9 bits (76), Expect(3) = 3e-84
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 927 CPICPLAKQTRMSFP 971
CP+CPLAKQ R+SFP
Sbjct: 579 CPVCPLAKQRRLSFP 593
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 260 bits (665), Expect(3) = 2e-83
Identities = 164/465 (35%), Positives = 240/465 (51%), Gaps = 3/465 (0%)
Frame = +2
Query: 998 FNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIHLVETQF 1177
F L+HVD+ G E S G ++FL+IV++Y+R TWVYL+K K F+ VE QF
Sbjct: 634 FELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQF 693
Query: 1178 DKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVARAILFQA 1354
+ +K VRSDN PE+ + + K I+HQ SC T Q N +VE K++H LNVARA+LFQ+
Sbjct: 694 NASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQS 753
Query: 1355 NLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSK-NHQITLIYEYLVVCVSHLPTSK 1531
N+P F G+ ILTS YLIN+TP + K P + + + + + + +C T
Sbjct: 754 NVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKD 813
Query: 1532 PTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQSNPHLTSQTGV 1711
KF+PRA +FLGYPH KGY+V +L N V +SR+VVF E TFPF+S P SQ +
Sbjct: 814 RHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ--SQPAL 871
Query: 1712 S-IVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXXXXXXXXXXXX 1888
Q+ +P I P S S++ P + P + S+ SS
Sbjct: 872 DPFPQSVSPFFYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETD------------- 918
Query: 1889 XXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPSTPLTQSTVH 2068
+KTP +L ++H + T P+T +
Sbjct: 919 ----------SSGFVTSSSAHVTRPQRQSKTPAYLSDYHCYLISHNSTPHPNPVTP---Y 965
Query: 2069 SLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQENNTWSLV 2248
LS L+Y+ L+ +++ F I+ EP R+A+ +++AL NTWS+
Sbjct: 966 PLSACLTYDLLSPSYRTFALNITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSIC 1025
Query: 2249 PLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
L K KWV+K K N +G+I+ +KA LVAKGY+Q++ VD+
Sbjct: 1026 TLPDGKNAVGCKWVFKTKYNADGSIERHKARLVAKGYTQLEGVDF 1070
Score = 67.4 bits (163), Expect(3) = 2e-83
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Frame = +1
Query: 457 VWILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYM 636
VWILD+GAS H+ LF+ + + V LPN ++ +VT V+ + L +VL++
Sbjct: 439 VWILDTGASTHVCCNLGLFSEVHDIPVVSVSLPNGSSLKVTQAGTVLLSSSITLSSVLFI 498
Query: 637 LFFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGT-- 810
F+ NL+S++ L + F R IQDL LY L + +
Sbjct: 499 PTFHYNLLSVSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTT 558
Query: 811 -------CNPVHRQTPKLWHQRLGH 864
C + T LWH RLGH
Sbjct: 559 ISLPSKFCTTLSATTFDLWHHRLGH 583
Score = 33.9 bits (76), Expect(3) = 2e-83
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 927 CPICPLAKQTRMSFP 971
CP+CPLAKQ R+SFP
Sbjct: 610 CPVCPLAKQRRLSFP 624
>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Tarenaya hassleriana]
Length = 1238
Score = 260 bits (665), Expect(3) = 2e-83
Identities = 164/465 (35%), Positives = 240/465 (51%), Gaps = 3/465 (0%)
Frame = +2
Query: 998 FNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIHLVETQF 1177
F L+HVD+ G E S G ++FL+IV++Y+R TWVYL+K K F+ VE QF
Sbjct: 634 FELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQF 693
Query: 1178 DKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVARAILFQA 1354
+ +K VRSDN PE+ + + K I+HQ SC T Q N +VE K++H LNVARA+LFQ+
Sbjct: 694 NASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQS 753
Query: 1355 NLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSK-NHQITLIYEYLVVCVSHLPTSK 1531
N+P F G+ ILTS YLIN+TP + K P + + + + + + +C T
Sbjct: 754 NVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKD 813
Query: 1532 PTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQSNPHLTSQTGV 1711
KF+PRA +FLGYPH KGY+V +L N V +SR+VVF E TFPF+S P SQ +
Sbjct: 814 RHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ--SQPAL 871
Query: 1712 S-IVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXXXXXXXXXXXX 1888
Q+ +P I P S S++ P + P + S+ SS
Sbjct: 872 DPFPQSVSPFFYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETD------------- 918
Query: 1889 XXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPSTPLTQSTVH 2068
+KTP +L ++H + T P+T +
Sbjct: 919 ----------SSGFVTSSSAHVTRPQRQSKTPAYLSDYHCYLISHNSTPHPNPVTP---Y 965
Query: 2069 SLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQENNTWSLV 2248
LS L+Y+ L+ +++ F I+ EP R+A+ +++AL NTWS+
Sbjct: 966 PLSACLTYDLLSPSYRTFALNITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSIC 1025
Query: 2249 PLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
L K KWV+K K N +G+I+ +KA LVAKGY+Q++ VD+
Sbjct: 1026 TLPDGKNAVGCKWVFKTKYNADGSIERHKARLVAKGYTQLEGVDF 1070
Score = 67.4 bits (163), Expect(3) = 2e-83
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Frame = +1
Query: 457 VWILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYM 636
VWILD+GAS H+ LF+ + + V LPN ++ +VT V+ + L +VL++
Sbjct: 439 VWILDTGASTHVCCNLGLFSEVHDIPVVSVSLPNGSSLKVTQAGTVLLSSSITLSSVLFI 498
Query: 637 LFFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGT-- 810
F+ NL+S++ L + F R IQDL LY L + +
Sbjct: 499 PTFHYNLLSVSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTT 558
Query: 811 -------CNPVHRQTPKLWHQRLGH 864
C + T LWH RLGH
Sbjct: 559 ISLPSKFCTTLSATTFDLWHHRLGH 583
Score = 33.9 bits (76), Expect(3) = 2e-83
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 927 CPICPLAKQTRMSFP 971
CP+CPLAKQ R+SFP
Sbjct: 610 CPVCPLAKQRRLSFP 624
>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X4 [Tarenaya hassleriana]
Length = 940
Score = 260 bits (665), Expect(3) = 2e-83
Identities = 164/465 (35%), Positives = 240/465 (51%), Gaps = 3/465 (0%)
Frame = +2
Query: 998 FNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIHLVETQF 1177
F L+HVD+ G E S G ++FL+IV++Y+R TWVYL+K K F+ VE QF
Sbjct: 299 FELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQF 358
Query: 1178 DKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVARAILFQA 1354
+ +K VRSDN PE+ + + K I+HQ SC T Q N +VE K++H LNVARA+LFQ+
Sbjct: 359 NASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQS 418
Query: 1355 NLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSK-NHQITLIYEYLVVCVSHLPTSK 1531
N+P F G+ ILTS YLIN+TP + K P + + + + + + +C T
Sbjct: 419 NVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKD 478
Query: 1532 PTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQSNPHLTSQTGV 1711
KF+PRA +FLGYPH KGY+V +L N V +SR+VVF E TFPF+S P SQ +
Sbjct: 479 RHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ--SQPAL 536
Query: 1712 S-IVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXXXXXXXXXXXX 1888
Q+ +P I P S S++ P + P + S+ SS
Sbjct: 537 DPFPQSVSPFFYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETD------------- 583
Query: 1889 XXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPSTPLTQSTVH 2068
+KTP +L ++H + T P+T +
Sbjct: 584 ----------SSGFVTSSSAHVTRPQRQSKTPAYLSDYHCYLISHNSTPHPNPVTP---Y 630
Query: 2069 SLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQENNTWSLV 2248
LS L+Y+ L+ +++ F I+ EP R+A+ +++AL NTWS+
Sbjct: 631 PLSACLTYDLLSPSYRTFALNITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSIC 690
Query: 2249 PLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
L K KWV+K K N +G+I+ +KA LVAKGY+Q++ VD+
Sbjct: 691 TLPDGKNAVGCKWVFKTKYNADGSIERHKARLVAKGYTQLEGVDF 735
Score = 67.4 bits (163), Expect(3) = 2e-83
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Frame = +1
Query: 457 VWILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYM 636
VWILD+GAS H+ LF+ + + V LPN ++ +VT V+ + L +VL++
Sbjct: 104 VWILDTGASTHVCCNLGLFSEVHDIPVVSVSLPNGSSLKVTQAGTVLLSSSITLSSVLFI 163
Query: 637 LFFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGT-- 810
F+ NL+S++ L + F R IQDL LY L + +
Sbjct: 164 PTFHYNLLSVSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTT 223
Query: 811 -------CNPVHRQTPKLWHQRLGH 864
C + T LWH RLGH
Sbjct: 224 ISLPSKFCTTLSATTFDLWHHRLGH 248
Score = 33.9 bits (76), Expect(3) = 2e-83
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 927 CPICPLAKQTRMSFP 971
CP+CPLAKQ R+SFP
Sbjct: 275 CPVCPLAKQRRLSFP 289
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 255 bits (651), Expect(3) = 3e-83
Identities = 180/516 (34%), Positives = 251/516 (48%), Gaps = 41/516 (7%)
Frame = +2
Query: 965 FSLRTISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLL 1144
F ISS F +IH DI G Y PSL GA YFLTIV++YTR TW++L++HK + ++LL
Sbjct: 562 FGTSAISSTKPFEIIHCDIWGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLL 621
Query: 1145 NNFIHLVETQFDKKVKIVRSDNGPEVT-LEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRH 1318
F V TQF+ ++K RSDN E T L F+ ++ Q SCV T Q NGVVE K+RH
Sbjct: 622 KRFFSYVFTQFEFRIKTFRSDNXXEFTSLRSFFQDNGVIFQHSCVYTPQQNGVVERKHRH 681
Query: 1319 SLNVARAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSKNHQITLIYEYL 1498
L VARA+ F A +P +F G LT+ ++IN+ K P F + + Y +L
Sbjct: 682 ILQVARALKFHAQVPTQFWGECALTAVHIINRLXSPILSFKTP---FELLYLKSPXYSHL 738
Query: 1499 VV--CVSHLPTSKPT-KFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTF 1669
V C+++ + KFD RA +F+GYP QK Y++++L+ KVF SRDV F ED F
Sbjct: 739 RVFGCLAYATNVHTSHKFDYRAMPSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIF 798
Query: 1670 PFQS------NPHLTSQTGVSIVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSAT 1831
P+ S P LT +G P P + DI S S++ P L N S T
Sbjct: 799 PYVSLKPNXTLPSLTHNSG------PIPLVAHDISSSFDSTSHALSPLLSNHTSTXSPXT 852
Query: 1832 N----SSSQHXXXXXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQE 1999
SS T+TP F E
Sbjct: 853 ENDDFSSPSRPSELIIEPSSQIDPNPSPSPSTTLVSPSSGPPFASIPSAPPTETPIFSPE 912
Query: 2000 FH-VEAALPSR-----TAPSTPL--------------------TQSTVHSLS*VLSYNRL 2101
H + A P R AP L T+ T + L+ +SY+R
Sbjct: 913 THSPKPATPLRRSSRHIAPPIKLHDYVCSHVSSNQSSSLIPGPTKGTRYPLANYVSYHRY 972
Query: 2102 THNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQENNTWSLVPLTSHKQPSDY 2281
+++F S EP ++A+ +++QALQ N TWSL PL + K P Y
Sbjct: 973 KPAYRSFVAQHSAVTEPRSYSEAAAHPEWQKAMRSELQALQANGTWSLTPLPAGKTPIGY 1032
Query: 2282 KWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDYKN 2389
+WVYK+K +G+I+ YKA LVAKG++Q++ VDY++
Sbjct: 1033 RWVYKIKHRSDGSIERYKARLVAKGFTQLEGVDYQD 1068
Score = 72.8 bits (177), Expect(3) = 3e-83
Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 19/250 (7%)
Frame = +1
Query: 172 KCNFCGRKGHTYDYCRRRKAAMEGEHENSKGN-HVTSMHDKRFDRNNFLFSQEECKELVE 348
+C++CG GH C + +H ++ N S +K F N + +E K V
Sbjct: 300 QCSYCGDMGHWVQKCFQLHG-YPPDHPKARMNLGSNSNRNKSFSATNQVSEADEGKPAVA 358
Query: 349 LLSKNKATKVNHAGNVSNYDE-VSGKAFSITQNGKKNV----WILDSGASDHIVYAPSLF 513
L ++A ++N DE S K ++T+ G V WI+DSGA+DHI + L
Sbjct: 359 L---SEAQLKQLLSLLNNQDENSSSKVNAVTKPGLSKVASRNWIIDSGATDHITSSSKLL 415
Query: 514 TFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYMLFFYLNLISITKLALDSFY 693
K V LP+ A + + + LH+VL + F ++LIS+++L
Sbjct: 416 HKDKNCSLPLVLLPSGEKANIVTKGTLPLNSVYYLHDVLSVPTFKVDLISVSRLTKGLNC 475
Query: 694 ITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCL-------------NPMQKGTCNPVHRQT 834
F ++C +QDL + LY L + + CN T
Sbjct: 476 SVTFFPYWCILQDLATRRTIGLGKQRDRLYYLVALATEKSLTNHSSSTNQPACNLAISST 535
Query: 835 PKLWHQRLGH 864
LWH RLGH
Sbjct: 536 -DLWHSRLGH 544
Score = 32.7 bits (73), Expect(3) = 3e-83
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 915 NENQCPICPLAKQTRMSF 968
+ N CPICPLAKQ+R+ F
Sbjct: 545 SNNACPICPLAKQSRLPF 562
>ref|XP_010692480.1| PREDICTED: uncharacterized protein LOC104905592 [Beta vulgaris subsp.
vulgaris]
Length = 1085
Score = 249 bits (637), Expect(3) = 2e-81
Identities = 159/485 (32%), Positives = 245/485 (50%), Gaps = 23/485 (4%)
Frame = +2
Query: 998 FNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIHLVETQF 1177
F L+H D+ G Y PS GA YFLT+V++Y+R+ WVYL+K+K + +F +V QF
Sbjct: 580 FELVHCDLWGPYSVPSSCGAVYFLTLVDDYSRAVWVYLLKNKTKVYQYFTSFFAMVARQF 639
Query: 1178 DKKVKIVRSDNGPEVT-LEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVARAILFQ 1351
D VKIVRSDNG E + F+ + I+ QTSC T Q NG VE K++H LNV+RA++FQ
Sbjct: 640 DTSVKIVRSDNGTEFNCMLPFFQTSGILFQTSCTGTPQQNGRVERKHQHILNVSRALMFQ 699
Query: 1352 ANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKR-FSKNHQITLIYEYLVVCVSHLPTS 1528
+LP F G +LT+ +LIN+TP K P + F + + L+ + +C +H +
Sbjct: 700 GHLPVHFWGECVLTAVHLINRTPSGVLGNKTPYEMIFGELPEFDLLRVFGCLCFAHNQKA 759
Query: 1529 KPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQSNPHLTSQTG 1708
K KF PR+ KC+F+GYP +KG+++Y+L +FVSRDV F E++FP+ S P +S
Sbjct: 760 KGDKFAPRSRKCIFIGYPTGKKGWKLYDLESGAIFVSRDVQFLEESFPYASLPS-SSTDP 818
Query: 1709 VSIVQTPTPSHSF--DIEPLVSSFSNSRVPP------------LENTPPNLSSATNSSSQ 1846
+ P PS D PL + + S PP L + P++SS+ ++S
Sbjct: 819 SDVFGPPAPSTHIPDDPAPLSLASNTSPSPPTSPTVPASPASGLSHPGPSVSSSPDTSPS 878
Query: 1847 HXXXXXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHL-TKTPTFLQEFHVEAALP 2023
L K P L +V +
Sbjct: 879 DSPPSPAAPLTPPDSPNPLPSSSSTSPSDTPEPVSPPMGRGLRAKQPNVLLRDYVVHVVE 938
Query: 2024 SRTAPSTPL-----TQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXX 2188
S + P L + +T + ++ ++Y++ + H++F I EP
Sbjct: 939 SESPPPGSLDVPCPSGTTPYPIAHFVNYDKFSPRHRSFLAAIDAGVEPRNFKEAMASSGW 998
Query: 2189 REAIHNKIQALQENNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQV 2368
R+A+ ++ AL++N TW + L K+ KWVYK+K N +GT++ KA LV G +V
Sbjct: 999 RDAMQLELSALEDNQTWVMTSLPPGKKALGSKWVYKIKYNSDGTVERLKARLVILGNHRV 1058
Query: 2369 KRVDY 2383
+ +DY
Sbjct: 1059 EGIDY 1063
Score = 71.2 bits (173), Expect(3) = 2e-81
Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Frame = +1
Query: 460 WILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYML 639
WI+D+GAS HI S + ++ + V LPN TA T V T H +L +VL++
Sbjct: 396 WIIDTGASHHITGTFSCLSNVRDIEGCPVGLPNGHTALATQQGDVYLTSHIVLRDVLFVP 455
Query: 640 FFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGTCNP 819
F+ NLIS++ L D+ F C IQDL S LY +
Sbjct: 456 AFHCNLISVSHLVSDNHCTIQFTPSLCAIQDLPSGTLIGAGERRGGLYYFRTVAVVQAVG 515
Query: 820 VHRQTP-KLWHQRLGH 864
V + LWHQRLGH
Sbjct: 516 VPSLSLFDLWHQRLGH 531
Score = 33.9 bits (76), Expect(3) = 2e-81
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 897 SANKSCNENQCPICPLAKQTRMSFP 971
S++K N C +CP+AKQTR SFP
Sbjct: 546 SSDKKKLNNVCDVCPMAKQTRDSFP 570
>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 237 bits (604), Expect(2) = 4e-77
Identities = 162/472 (34%), Positives = 237/472 (50%), Gaps = 6/472 (1%)
Frame = +2
Query: 986 SVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIHLV 1165
++ F+LIH DI G S+ YFLT V++++R TW+ L+K+K + R + NFIH +
Sbjct: 486 AIKCFDLIHFDIWGPISIKSVHNHAYFLTAVDDHSRYTWITLMKNKSEARLHVQNFIHFI 545
Query: 1166 ETQFDKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVARAI 1342
+TQ++ VK +R+DNGPE + FY SK I+HQTSCV++ Q NG VE K++ LN+ RA+
Sbjct: 546 KTQYNHSVKSIRTDNGPEFLMPDFYASKGILHQTSCVDSPQQNGRVERKHQQILNIGRAL 605
Query: 1343 LFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHP---LKRFSKNHQITLIYEYLVVCVS 1513
L Q+NLPK F A+ + Y++N+ P + K P L + + ++ LV +
Sbjct: 606 LVQSNLPKSFWCYAVSHAVYIMNRVPAPNLQNKSPYTLLYNTAPDFDTLKVFGSLV--FA 663
Query: 1514 HLPTSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQSNPHL 1693
S TK D RA KC+FLGY KG + +L N +F+SRDV E FP+QS+
Sbjct: 664 STLQSHRTKLDLRARKCVFLGYKSGVKGVVLLDLLNNSIFLSRDVTHHEHIFPYQSSSPK 723
Query: 1694 TSQTGVSIVQTPTPSH-SFDIE-PLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXXXXX 1867
T SI TP S + D + L + S PP + PN+S+ T S
Sbjct: 724 TPWEYHSISPTPNDSDITLDSDISLDINAEQSPSPPHSSLSPNISNDTVISDTSTSTPPP 783
Query: 1868 XXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPSTP 2047
+ + P L ++ P+ T
Sbjct: 784 KDHNDSPLLHSKPIRQ-------------------RRAPLHLSDYVCHNTSPTSHESLTS 824
Query: 2048 LTQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQE 2227
T+S + LS S L+ +HKAF+ +I+ EP A+ ++ AL +
Sbjct: 825 GTKSK-YPLSSFHSLTLLSPSHKAFSMSITHCTEPQSYEEASKHEHWVTAMKEELNALAK 883
Query: 2228 NNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
N TW +V L H +P KWVYK+K NG I+ YKA LVAKGY+QV+ +DY
Sbjct: 884 NCTWKIVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAKGYNQVEGIDY 935
Score = 82.0 bits (201), Expect(2) = 4e-77
Identities = 68/259 (26%), Positives = 97/259 (37%), Gaps = 17/259 (6%)
Frame = +1
Query: 175 CNFCGRKGHTYDYCRRRKAAMEGEHENSKGNHVTSMHDKRFDRNNFLFSQEECKELVELL 354
C +C + H + C ++ G + NH S H D
Sbjct: 231 CTYCHKTNHFVENCFQK----HGVPPHMMKNHSGSAHHSAVDGGEH-------------- 272
Query: 355 SKNKATKVNHAGNVSNYDEVSGKAFSITQNGKKNVWILDSGASDHIVYAPSLFTFLKPVH 534
K K++H S I N + WI+DSGAS HI + F ++
Sbjct: 273 --TKGMKISHFFYSS-----------ICNNIALDTWIIDSGASHHICASLHWFHSYSEIN 319
Query: 535 NRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYMLFFYLNLISITKLALDSFYITIFLRH 714
+KLPN + VVF+ F + NVLY+ F +NLIS+++L + Y F
Sbjct: 320 PMIIKLPNGNHVTTKYAGTVVFSSSFSITNVLYVPTFTVNLISVSQLCHHTPYTLNFTDT 379
Query: 715 FCFIQDLRSXXXXXXXXXXXXLYCLNPMQK-------------GTCNPVHRQTPKLWHQR 855
C IQ+ +S LY L K + N VH +WH R
Sbjct: 380 ICSIQEQKSLKMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHFR 439
Query: 856 LGHL----LPKFHCYFPFL 900
LGHL + H FPF+
Sbjct: 440 LGHLSSSRIALLHSQFPFI 458
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 267 bits (683), Expect(3) = 6e-76
Identities = 168/481 (34%), Positives = 246/481 (51%), Gaps = 6/481 (1%)
Frame = +2
Query: 959 NVFSLRTISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRN 1138
+ F L S+ SF LIH D+ G Y PS +GA+YFLTIV++Y+R WVYL+ K +T+
Sbjct: 558 DTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQK 617
Query: 1139 LLNNFIHLVETQFDKKVKIVRSDNGPE-VTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKN 1312
L +FI LVE QFD ++KIVRSDNG E + + ++L K I H+TSCV T NG VE K+
Sbjct: 618 HLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYFLHKGIAHETSCVGTPHQNGRVERKH 677
Query: 1313 RHSLNVARAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSKN-HQITLIY 1489
RH LN+ARA+ FQ+ LP +F G IL++AYLIN+TP + K P + K + + +
Sbjct: 678 RHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLR 737
Query: 1490 EYLVVCVSHLPTSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTF 1669
+ +C +H K KF R+ +C+F+GYPH QKG+R+++L E K FVSRDV+F E F
Sbjct: 738 VFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEF 797
Query: 1670 PF--QSNPHLTSQTGVSIVQTPTPSHSFDIEPLVS-SFSNSRVPPLENTPPNLSSATNSS 1840
P+ S + V V P + ++ + + V P T P + S
Sbjct: 798 PYSKMSCNEEDERVLVDCVGPPFIEEAIGPRTIIGRNIGEATVGPNVATGPIIPEINQES 857
Query: 1841 SQHXXXXXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAAL 2020
S + T+ P L+ F
Sbjct: 858 SSPSEFVSLSSLDPFLASSTVQTADLPLSSTTPAPIQLRRSSRQTQKPMKLKNFVTNTVS 917
Query: 2021 PSRTAPSTPLTQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAI 2200
+P + S+++ + + +R T +HKAF ++ EP REA+
Sbjct: 918 VESISPEA--SSSSLYPIEKYVDCHRFTSSHKAFLAAVTAGMEPTTYNEAMVDKAWREAM 975
Query: 2201 HNKIQALQENNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVD 2380
+I++L+ N T+S+V L K+ KWVYK+K +G I+ YKA LV G Q + VD
Sbjct: 976 SAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVD 1035
Query: 2381 Y 2383
Y
Sbjct: 1036 Y 1036
Score = 38.9 bits (89), Expect(3) = 6e-76
Identities = 40/187 (21%), Positives = 72/187 (38%), Gaps = 1/187 (0%)
Frame = +1
Query: 319 SQEECKELVELLSKNKATKVNHAGNVSNYDEVSGKAFSITQNGKKNVWILDSGASDHIVY 498
+ E+ + +V+LL+ ++ N SN E S+ + WILD+GAS H+
Sbjct: 362 TDEQWRGVVKLLNAGRSD------NKSNAHETQSGTCSLFTS-----WILDTGASHHMTG 410
Query: 499 APSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYMLFFYLNLISITKLA 678
L + ++ + + L + V H IL +V Y+ +LIS+ ++
Sbjct: 411 NLELLSDMRSMSPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKELESDLISVGQMM 470
Query: 679 LDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGTCNPVHRQTP-KLWHQR 855
++ + D + +C M+ + P LWH+R
Sbjct: 471 DENHCV-----------DRTTRMVTRIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRR 519
Query: 856 LGHLLPK 876
LGH K
Sbjct: 520 LGHASDK 526
Score = 30.0 bits (66), Expect(3) = 6e-76
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 864 SSTKVSLLFP---FSANKSCNENQCPICPLAKQTRMSFP 971
+S K+ L P S+ K EN C C AKQTR +FP
Sbjct: 523 ASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFP 561
>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
Length = 1059
Score = 249 bits (637), Expect(2) = 7e-76
Identities = 168/478 (35%), Positives = 245/478 (51%), Gaps = 5/478 (1%)
Frame = +2
Query: 965 FSLRTISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLL 1144
FS+ +ISSV F LIH D G Y SL+GAK FLTIV++Y+R TWV+ + HK +T++LL
Sbjct: 560 FSVSSISSVRPFELIHCDXWGPYKIASLSGAKXFLTIVDDYSRFTWVFFMHHKSETQHLL 619
Query: 1145 NNFIHLVETQFDKKVKIVRSDNGPE-VTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRH 1318
F V+TQF + +R DNG E ++ F+ K +Q SCV T Q NGVVE K+RH
Sbjct: 620 VKFFSFVQTQFHVSIANIRVDNGGEFFSMREFFKQKGTTYQHSCVYTSQQNGVVERKHRH 679
Query: 1319 SLNVARAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSKNHQITLIYEYL 1498
L RA FQA+LP F + T+ ++IN+ P + P +R + Y ++
Sbjct: 680 ILESTRAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERL---YGKLPSYSHI 736
Query: 1499 VV--CVSHLP-TSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTF 1669
V C+++ P KF PRA +C+FLGYP QK Y++Y+L +++F SRDVVF E F
Sbjct: 737 RVFGCLAYATNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIF 796
Query: 1670 PFQSNPHLTSQTGVSIVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQH 1849
P++S P +S + I P D+ P V S PP +P S NS S
Sbjct: 797 PYESIPSPSSNSDPVI-----PLSISDLSPPVPQPS----PPEPISPIQQPSLPNSVSTQ 847
Query: 1850 XXXXXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSR 2029
R + +P L LP
Sbjct: 848 ---------PSPASPPPEPILRRSQRPHHPPMALRDYVCNQVTSPNHL--------LPLS 890
Query: 2030 TAPSTPLTQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNK 2209
++P +ST + L +SY+ + H++FTT +S EP +EA+ ++
Sbjct: 891 SSPQ----KSTCYPLCNFVSYHHYSPQHRSFTTAVSQDIEPTSYAEAASHSHWQEAMQSE 946
Query: 2210 IQALQENNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
+ AL+ N+TWSL L K+P +WVYK+K + +GTI+ +K LVAKGY+Q++ +DY
Sbjct: 947 LAALEANHTWSLTSLPPGKKPIGCRWVYKIKRHSDGTIERFKDRLVAKGYTQLEGIDY 1004
Score = 65.1 bits (157), Expect(2) = 7e-76
Identities = 76/292 (26%), Positives = 113/292 (38%), Gaps = 47/292 (16%)
Frame = +1
Query: 175 CNFCGRKGHTYDYCRRRKA--AMEGEHENSKGNHVTSMHDKRFDRNNFLFSQEECKELVE 348
C +C R H + C + +H +++ NH S H KR N+ S KE
Sbjct: 264 CTYCDRDHHVRETCWKLNGYPPEHPKHASNRSNH-GSTHFKR--NNSHQSSANNVKE--R 318
Query: 349 LLSKNKATKVNHAGNVSNYDEVS---GKAFSITQNGKKNV--------------WILDSG 477
+ + + N ++ +S GK + + N K N I+DSG
Sbjct: 319 PVMQEVPSMTNGLSDLQIQQILSIMQGKGTTQSTNPKANAAASGLLQTLLHLHRLIIDSG 378
Query: 478 ASDHIVYAPSLF------TFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYML 639
A+DHI +P+L TFL PV +P+ A +T I + L NVL +
Sbjct: 379 ATDHITSSPTLLVNSRKNTFLPPV-----AMPSGEQAPITSIGNLPLNSAATLKNVLGVP 433
Query: 640 FFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCL---------- 789
F ++L+S++++ D F H+C +QDL + LY L
Sbjct: 434 SFKVDLMSVSRVTKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYLVALASEKPKT 493
Query: 790 -NPMQKGT-CNPVHRQ---TPKLWHQRLGHL-------LPKFHCYFPFLQIN 909
P T C Q + LWH RLGHL + K FPF N
Sbjct: 494 QTPSXXATSCRSPSSQVTSSTALWHXRLGHLSSSRLDFMAKHLLNFPFQSNN 545
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 228 bits (582), Expect(3) = 2e-75
Identities = 150/467 (32%), Positives = 235/467 (50%), Gaps = 3/467 (0%)
Frame = +2
Query: 992 SSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIHLVET 1171
S+F L+H+D+ G + ++ G KYFLTIV++++R+TW+YL+K K + FI LVE
Sbjct: 623 STFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKSDVLTVFPAFIDLVEN 682
Query: 1172 QFDKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVARAILF 1348
Q+D +VK VRSDN E+ FY +K IV SC T + N VVE K++H LNVARA++F
Sbjct: 683 QYDTRVKSVRSDNAKELAFTEFYKAKGIVSFHSCPETPEQNSVVERKHQHILNVARALMF 742
Query: 1349 QANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFS-KNHQITLIYEYLVVCVSHLPT 1525
Q+N+ + G+ +LT+ +LIN+TP K P + + K + + + +C S +
Sbjct: 743 QSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSSTSS 802
Query: 1526 SKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQSNPHLTSQT 1705
+ KF PR+ C+FLGYP KGY++ +L N V +SR+V F E+ FP S+ S T
Sbjct: 803 KQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEFHEELFPLASSQQ--SAT 860
Query: 1706 GVSIVQTPTPSHSFDIEPLVSSFS-NSRVPPLENTPPNLSSATNSSSQHXXXXXXXXXXX 1882
S V TP ++PL S S S +P P +S +T S +
Sbjct: 861 TASDVFTP-------MDPLSSGNSITSHLP-----SPQISPSTQISKR------------ 896
Query: 1883 XXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPSTPLTQST 2062
+TK P LQ++H + +
Sbjct: 897 ----------------------------RITKFPAHLQDYHCYF-----------VNKDD 917
Query: 2063 VHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQENNTWS 2242
H +S LSY++++ +H + IS P AI +I A++ +TW
Sbjct: 918 SHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWE 977
Query: 2243 LVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
+ L K+ KWV+ +K + +G+++ +KA +VAKGY+Q + +DY
Sbjct: 978 ITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYTQKEGLDY 1024
Score = 80.1 bits (196), Expect(3) = 2e-75
Identities = 72/265 (27%), Positives = 105/265 (39%), Gaps = 35/265 (13%)
Frame = +1
Query: 175 CNFCGRKGHTYDYCRRRKAAMEGEHENSKGN-----------HVTSMHDKRFDRNNFL-- 315
C+FC R GH + C ++ G K + VT DK + L
Sbjct: 313 CSFCNRVGHIAERCYKKHGFPPGFTPKGKSSDKPPKPQAVAAQVTLSPDKMTGQLETLAG 372
Query: 316 -FSQEECKELVELLSKNKATKV--------NHAGNVSNYDEVSGKAFS-----------I 435
FS ++ + L+ L S ++ H + S SG FS +
Sbjct: 373 NFSPDQIQNLIALFSSQLQPQIVSPQTASSQHEASSSQSVAPSGILFSPSTYCFIGILAV 432
Query: 436 TQNG-KKNVWILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHF 612
+ N + W++DSGA+ H+ + LF L FV LP +++ + V+
Sbjct: 433 SHNSLSSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDI 492
Query: 613 ILHNVLYMLFFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLN 792
IL NVL++ F LNLISI+ L D IF C IQDL LY L+
Sbjct: 493 ILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLD 552
Query: 793 PMQKG-TCNPVHRQTPKLWHQRLGH 864
+ N V +WH+RLGH
Sbjct: 553 TQSPAISVNAV--VDVSVWHKRLGH 575
Score = 26.2 bits (56), Expect(3) = 2e-75
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 903 NKSCNENQCPICPLAKQTRMSFP 971
+K+ C +C LAKQ ++SFP
Sbjct: 593 HKNKKSAYCHVCHLAKQKKLSFP 615
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 246 bits (627), Expect(3) = 2e-75
Identities = 155/476 (32%), Positives = 236/476 (49%), Gaps = 3/476 (0%)
Frame = +2
Query: 965 FSLRTISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLL 1144
F + S + F+LIH+D G + P+ G KYFLTIV++Y+R+TWVYL+K K +
Sbjct: 631 FPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTIVDDYSRATWVYLMKAKNDVLQIF 690
Query: 1145 NNFIHLVETQFDKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHS 1321
+F+ +VETQ+ VK VRSDN PE+ E Y +K I+ SC T Q N VVE K++H
Sbjct: 691 PDFLKMVETQYGTLVKAVRSDNAPELRFEALYQAKGIISYHSCPETPQQNSVVERKHQHI 750
Query: 1322 LNVARAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFS-KNHQITLIYEYL 1498
LNVARA++F+AN+P F G+ IL++ +LIN+ P K P + K T + +
Sbjct: 751 LNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFELLHLKVPDYTSLKVFG 810
Query: 1499 VVCVSHLPTSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQ 1678
+C + KF PRA C+FLGYP KGY++ +L N + +SR VVF+E FPF
Sbjct: 811 CLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIHISRHVVFYETVFPFT 870
Query: 1679 SNPHLTSQTGVSIVQTPTPSHSFD-IEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXX 1855
+T P FD ++P+ + +EN P SA SS+
Sbjct: 871 D-------------KTIIPRDVFDLVDPVHEN--------IENPPSTSESAPKVSSKRE- 908
Query: 1856 XXXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTA 2035
++ P +LQ++ A
Sbjct: 909 ---------------------------------------SRPPGYLQDYFCNAV------ 923
Query: 2036 PSTPLTQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQ 2215
+T+ + L+ ++Y +L+ A+ ++ EP +A+ +I
Sbjct: 924 --PDVTKDVRYPLNAYINYTQLSEEFTAYICAVNKYPEPCTYAQAKKIKEWLDAMEIEID 981
Query: 2216 ALQENNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
AL+ NTWS+ L K+P KWV+K+KLN +G+++ +KA LVAKGY+Q + +DY
Sbjct: 982 ALESTNTWSVCSLPQGKKPIGCKWVFKVKLNADGSLERFKARLVAKGYTQREGLDY 1037
Score = 64.7 bits (156), Expect(3) = 2e-75
Identities = 72/286 (25%), Positives = 105/286 (36%), Gaps = 55/286 (19%)
Frame = +1
Query: 172 KCNFCGRKGHTYDYCRRRKAAMEGEHENSKGNHVTSMHDKRFDRNNFL----------FS 321
+C+ CG GH D C + G K S K N L
Sbjct: 309 QCSHCGYTGHNADTCYKIHGYPVGFKHKDKKTVTPSEKPKSVVANLALTDGKVSVTQGIG 368
Query: 322 QEECKELVELLSKNK--------ATKVNHAG-----------NVSNYDEVSGKAFS---- 432
+ ELV +SK++ +T++++ N N +G +FS
Sbjct: 369 PDGIVELVGSMSKSQIQDVIAYFSTQLHNPAKPITVASFASTNNDNGSTFTGISFSPSTL 428
Query: 433 -----ITQNGKK---NVWILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHID 588
+T + K N WI+DSGA+ H+ Y +LF L + V LP + ++ I
Sbjct: 429 RLLCSLTSSKKVLSLNTWIIDSGATHHVSYDRNLFESLSDGLSNEVTLPTGSNVKIAGIG 488
Query: 589 KVVFTLHFILHNVLYMLFFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXX 768
+ + L NVLY+ F LNL+S+++ D F C IQD
Sbjct: 489 VIKLNSNLTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQ 548
Query: 769 XXXLYCLNP--------------MQKGTCNPVHRQTPKLWHQRLGH 864
LY L+ +K CN V LWH RLGH
Sbjct: 549 IGGLYVLDTSSVECTSVDINSSVTEKQYCNAV--VDSALWHSRLGH 592
Score = 23.9 bits (50), Expect(3) = 2e-75
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 927 CPICPLAKQTRMSFP 971
C IC AKQ +SFP
Sbjct: 618 CSICQKAKQKHLSFP 632
>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
Length = 1472
Score = 239 bits (610), Expect(2) = 3e-75
Identities = 170/507 (33%), Positives = 240/507 (47%), Gaps = 32/507 (6%)
Frame = +2
Query: 965 FSLRTISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLL 1144
F ISS F +IH I G Y PSL GA YFLTIV++YTR TW++L++HK + ++LL
Sbjct: 550 FGTSAISSTKPFEIIHCHIWGRYQHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLL 609
Query: 1145 NNFIHLVETQFDKKVKIVRSDNGPEVT-LEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRH 1318
F V TQF+ +K R+DNG E T L F+ ++ Q S V T Q NGVVE K+RH
Sbjct: 610 KRFFSYVFTQFEFCIKTFRNDNGREFTSLHSFFQDNGVIFQHSYVYTPQQNGVVERKHRH 669
Query: 1319 SLNVARAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSKNHQITLIYEYL 1498
L V RA+ F A +P +F G LT+ ++IN P K P F + Y YL
Sbjct: 670 ILQVTRALKFHAQVPTQFWGECALTAVHIINWLPSPVLSFKTP---FELLYSKPPSYSYL 726
Query: 1499 VV--CVSHLPTSKPT-KFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTF 1669
V C+++ + KFD RA +F+GYP QK Y++++L+ KVF SRDV F ED F
Sbjct: 727 HVFGCLAYATNVHTSHKFDYRAMSSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIF 786
Query: 1670 PFQSNPHLTSQTGVSIVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATN----S 1837
P+ S ++ ++ P P + DI + S S++ P L N LS T S
Sbjct: 787 PYVSLKPNSTLPSLTHNFGPIPLVAHDISSSLDSTSHALSPLLSNHTSTLSPTTENDDFS 846
Query: 1838 SSQHXXXXXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAA 2017
T+TP F E H
Sbjct: 847 FPSRPSVLVIKPSSQIDPNPSPLPSTTLVSPSSVPPFASIPFAPPTETPIFSPETHSPKP 906
Query: 2018 LPSRTAPSTP-----------------------LTQSTVHSLS*VLSYNRLTHNHKAFTT 2128
+ + TP T+ T + L+ +SY+R +++F
Sbjct: 907 ITPLSRHITPPIKLHNYVCSHVSSNQLSSLIPGPTKGTRYPLANYVSYHRYKPAYRSFVA 966
Query: 2129 TISIQKEPXXXXXXXXXXXXREAIHNKIQALQENNTWSLVPLTSHKQPSDYKWVYKLKLN 2308
S EP +EA+ ++QALQ N TWSL PL K +WVYK+K
Sbjct: 967 QHSAVTEPRSYSEAAAHPEWQEAMCFELQALQANGTWSLTPLPVCKTSIGCRWVYKIKHR 1026
Query: 2309 PNGTIDCYKA*LVAKGYSQVKRVDYKN 2389
+G+I+ YKA LVAKG++Q++ VDY++
Sbjct: 1027 SDGSIERYKARLVAKGFTQLEGVDYQD 1053
Score = 73.2 bits (178), Expect(2) = 3e-75
Identities = 66/252 (26%), Positives = 106/252 (42%), Gaps = 18/252 (7%)
Frame = +1
Query: 172 KCNFCGRKGHTYDYCRRRKAAMEGEHENSKGNHVTSMHDKRFDRNNFLFSQEECKELVEL 351
+C++CG GH C + G + S +K F N + +E K V L
Sbjct: 269 QCSYCGDMGHWVQKCFQLHGYPPGHPKARMNLGSNSNRNKSFSAANQVSEADEGKSAVAL 328
Query: 352 LSKNKATKVNHAGNVSNYDE-VSGKAFSITQNGKKNV----WILDSGASDHIVYAPSLFT 516
S+ + ++ ++N DE S K ++T+ G V WI+DSGA+DHI + L
Sbjct: 329 -SETQLKQL--LSLLNNQDENSSSKVNAVTKPGLSKVAFRNWIIDSGATDHITSSSKLLH 385
Query: 517 FLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYMLFFYLNLISITKLALDSFYI 696
K V LP+ A + + + LH+VL++L F ++LI +++L
Sbjct: 386 KDKNCSLPPVLLPSGEKANIVTKWTLPLNSVYYLHDVLFVLTFKVDLILVSRLTRGLNCS 445
Query: 697 TIFLRHFCFIQDLRSXXXXXXXXXXXXLYCL-------------NPMQKGTCNPVHRQTP 837
F ++C +Q+L + LY L + + CN T
Sbjct: 446 MTFFPYWCILQNLATRRTIGLGKQRDGLYYLVALATEKSLTNHSSSTNQPACNLAISST- 504
Query: 838 KLWHQRLGHLLP 873
LWH RLGH+ P
Sbjct: 505 DLWHSRLGHVSP 516
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 255 bits (652), Expect(2) = 6e-74
Identities = 174/521 (33%), Positives = 244/521 (46%), Gaps = 46/521 (8%)
Frame = +2
Query: 962 VFSLRTISSVSSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNL 1141
VF + ++ F+LIH D+ G Y PS TGA YFLT+V++Y+RS W YL+ K + L
Sbjct: 545 VFPISNNKTMECFSLIHGDVWGPYRTPSTTGAVYFLTLVDDYSRSVWTYLMSSKTEVSQL 604
Query: 1142 LNNFIHLVETQFDKKVKIVRSDNGPE-VTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNR 1315
+ NF + E QF K+VK R+DNG E + L ++ + I+HQTSCV+T Q NG VE K+R
Sbjct: 605 IKNFCAMSERQFGKQVKAFRTDNGTEFMCLTPYFQTHGILHQTSCVDTPQQNGRVERKHR 664
Query: 1316 HSLNVARAILFQANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLK-RFSKNHQITLIYE 1492
H LNVARA LFQ NLP +F G +ILT+ +LIN+TP K K P + F + ++
Sbjct: 665 HILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPYELLFGERPSYDMLRS 724
Query: 1493 YLVVCVSHLPTSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFP 1672
+ +C +H+ KF R+ KC+F+GYPH +K +RVY+L K+F SRDV F ED +P
Sbjct: 725 FGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFHEDIYP 784
Query: 1673 F----QSNPHL-------------------TSQTGVSIVQTPTPSHSFDIEPLVSSFSNS 1783
+ QSN L T V + +P+ S I+ S S
Sbjct: 785 YATATQSNVPLPPPTPPMVNDDWFLPISTQVDSTNVDSSSSSSPAQSGSIDQPPRSIDQS 844
Query: 1784 RVPPLENTPPNLSSATNSSS-QHXXXXXXXXXXXXXXXXXXXXXRIXXXXXXXXXXXXXX 1960
P + S SSS
Sbjct: 845 PSTSTNPVPEEIGSIVPSSSPSRSIDRSTSDLSASDTTELLSTGESSTPSSPGLPELLGK 904
Query: 1961 XXHLTKTPTFLQEFHVEAALPSRTA------PSTPL-------------TQSTVHSLS*V 2083
K L++F +TA PS L + T++ LS
Sbjct: 905 GCREKKKSVLLKDFVTNTTSKKKTASHNIHSPSQVLPSGLPTSLSADSVSGKTLYPLSDF 964
Query: 2084 LSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQENNTWSLVPLTSH 2263
L+ + + NH AF I EP EA+ +I AL+ N+TW + L
Sbjct: 965 LTNSGYSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHG 1024
Query: 2264 KQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDYK 2386
K+ KWVYKLK N +GT++ +KA LV G Q + VD+K
Sbjct: 1025 KKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFK 1065
Score = 52.8 bits (125), Expect(2) = 6e-74
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Frame = +1
Query: 463 ILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYMLF 642
++D+GAS H+ S+ + + V P+ +Q T ++ + LH+VL++
Sbjct: 372 VIDTGASHHMTGDCSILVDVFDITPSPVTKPDGKASQATKCGTLLLHDSYKLHDVLFVPD 431
Query: 643 FYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLNPMQKGTCNP- 819
F LIS++KL + I IF FCF+QD +Y G P
Sbjct: 432 FDCTLISVSKLLKQTSSIAIFTDTFCFLQDRFLRTLIGAGEEREGVYYFT----GVLAPR 487
Query: 820 VHRQTP------KLWHQRLGH 864
VH+ + LWH+RLGH
Sbjct: 488 VHKASSDFAISGDLWHRRLGH 508
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 232 bits (591), Expect(3) = 2e-72
Identities = 148/467 (31%), Positives = 224/467 (47%), Gaps = 5/467 (1%)
Frame = +2
Query: 998 FNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIHLVETQF 1177
F+L+H+D+ G + ++ G KYFLTIV++++R+TW+YL+K K + + FI VE Q+
Sbjct: 614 FDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQY 673
Query: 1178 DKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVARAILFQA 1354
KVK VRSDN PE+ FY K IV SC T + N VVE K++H LNVARA++FQ+
Sbjct: 674 KVKVKAVRSDNAPELKFTSFYAEKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQS 733
Query: 1355 NLPKRF*GNAILTSAYLINKTPHHFFKEKHPLKRFSKNHQITLIYEYL----VVCVSHLP 1522
+P G+ +LT+ +LIN+TP K P + + +YE L +C S
Sbjct: 734 QVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGT---APVYEQLRTFGCLCYSSTS 790
Query: 1523 TSKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQSNPHLTSQ 1702
+ KF PR+ CLFLGYP KGY++ +L N VF+SR+V F E+ FP NP S+
Sbjct: 791 PKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVFPLAKNP--GSE 848
Query: 1703 TGVSIVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXXXXXXXXXX 1882
+ + + P S I S +S + + PP +SS
Sbjct: 849 SSLKLFTPMVPVSSGIISDTTHS-PSSLPSQISDLPPQISS------------------- 888
Query: 1883 XXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPSTPLTQST 2062
+ K P L ++H P
Sbjct: 889 ---------------------------QRVRKPPAHLNDYHCNTMQSDHKYP-------- 913
Query: 2063 VHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQENNTWS 2242
+S +SY++++ +H + I+ P EA+ +I A+++ NTW
Sbjct: 914 ---ISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWE 970
Query: 2243 LVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
+ L K+ KWV+ LK +G ++ YKA LVAKGY+Q + +DY
Sbjct: 971 ITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEGLDY 1017
Score = 65.9 bits (159), Expect(3) = 2e-72
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Frame = +1
Query: 460 WILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLHFILHNVLYML 639
W++DSGA+ H+ + SLF+ L V LP T +++ + + +L NVL++
Sbjct: 431 WVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKNVLFIP 490
Query: 640 FFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCLN-PMQKGTCN 816
F LNLISI+ L D IF ++ C IQDL LY L+ Q + N
Sbjct: 491 EFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVGDQSISVN 550
Query: 817 PVHRQTPKLWHQRLGH 864
V +WH+RLGH
Sbjct: 551 AV--VDISMWHRRLGH 564
Score = 26.9 bits (58), Expect(3) = 2e-72
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 903 NKSCNENQCPICPLAKQTRMSFPYVLSQVC 992
+K+ + C +C LAKQ ++SFP ++VC
Sbjct: 582 HKNKGSDFCHVCHLAKQRKLSFP-TSNKVC 610
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 224 bits (571), Expect(3) = 2e-72
Identities = 138/472 (29%), Positives = 226/472 (47%), Gaps = 8/472 (1%)
Frame = +2
Query: 992 SSFNLIHVDILGGYHEPSLTGAKYFLTIVNNYTRSTWVYLIKHK*QTRNLLNNFIHLVET 1171
+SF L+HVD+ G + +L G KYFLTIV++++R+TW+YL++ K ++ F++ +ET
Sbjct: 572 ASFQLLHVDVWGPFSVETLEGYKYFLTIVDDHSRATWIYLLQSKSDVLHIFPTFVNQIET 631
Query: 1172 QFDKKVKIVRSDNGPEVTLEHFYLSKWIVHQTSCVNT-Q*NGVVEHKNRHSLNVARAILF 1348
Q++ K+K VR DN PE++ + K IV SC T + N V+E K++H LNVARA++F
Sbjct: 632 QYNTKIKSVRRDNAPELSFTELFKEKGIVSYHSCPETLEQNSVLERKHQHLLNVARALMF 691
Query: 1349 QANLPKRF*GNAILTSAYLINKTPHHFFKEKHPLK-RFSKNHQITLIYEYLVVCVSHLPT 1525
Q+ +P ++ G+ +LT+A+LIN+TP K P + K Q + + +C
Sbjct: 692 QSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRTFGCLCYGSTSP 751
Query: 1526 SKPTKFDPRATKCLFLGYPHSQKGYRVYNLTENKVFVSRDVVFFEDTFPFQSNPHLTSQT 1705
+ KF PR+ C+FLGYP KGY++ +L NK+++SR+V F ED FP + + +
Sbjct: 752 KQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKIYISRNVTFHEDIFPMAKHQKMDESS 811
Query: 1706 ------GVSIVQTPTPSHSFDIEPLVSSFSNSRVPPLENTPPNLSSATNSSSQHXXXXXX 1867
V++ P+P N P P +S + H
Sbjct: 812 LHFFPPKVTVPSAPSP--------------NISSSPFSTLSPQISKRQRTVPAH------ 851
Query: 1868 XXXXXXXXXXXXXXXRIXXXXXXXXXXXXXXXXHLTKTPTFLQEFHVEAALPSRTAPSTP 2047
L++FH + S S+
Sbjct: 852 -----------------------------------------LKDFHCYSVHDSAYPISST 870
Query: 2048 LTQSTVHSLS*VLSYNRLTHNHKAFTTTISIQKEPXXXXXXXXXXXXREAIHNKIQALQE 2227
L+ S + S +H A+ +I+ P E+ ++ A++E
Sbjct: 871 LSYSQISS------------HHLAYINSITNIPIPQSYAEVRQSKEWTESADKELDAMEE 918
Query: 2228 NNTWSLVPLTSHKQPSDYKWVYKLKLNPNGTIDCYKA*LVAKGYSQVKRVDY 2383
N+TW +VPL K+ +WV+ LK N +GT++ K+ LV KGY+Q + +DY
Sbjct: 919 NDTWDVVPLPKGKKAIGCRWVHTLKFNADGTLERRKSRLVGKGYTQKEGLDY 970
Score = 75.1 bits (183), Expect(3) = 2e-72
Identities = 69/269 (25%), Positives = 103/269 (38%), Gaps = 39/269 (14%)
Frame = +1
Query: 175 CNFCGRKGHTYDYCRRRKAAMEG----EHENSKGNHV----------------TSMHDKR 294
C+FC R GH + C ++ G S G+ + +
Sbjct: 261 CSFCNRVGHIAERCYKKHGFPPGFVSKYKSQSSGDRLQKPKQVAAQVSFSPPNSGQSPMT 320
Query: 295 FDRNNFLFSQEECKELVELLSK---NKATKVNHAGNVSNYDEVSGKAFSIT--------- 438
D S+E+ ++ + L S N N A + + SG +F+ T
Sbjct: 321 MDHLVGNHSKEQLQQFIALFSSQLPNVTMGSNEASSSKQPMDNSGISFNPTTLVFIGLLT 380
Query: 439 ---QNGKKNVWILDSGASDHIVYAPSLFTFLKPVHNRFVKLPNNTTAQVTHIDKVVFTLH 609
WI+DSGA+ H+ + S++T + V LPN +++ + V H
Sbjct: 381 VSRHTLANETWIIDSGATHHVCHDRSMYTSIDITTTSNVNLPNGMIVKISGVGIVQLNEH 440
Query: 610 FILHNVLYMLFFYLNLISITKLALDSFYITIFLRHFCFIQDLRSXXXXXXXXXXXXLYCL 789
LHNVLY+ F LNL+SI+ L D IF C IQD LY L
Sbjct: 441 ITLHNVLYIPEFRLNLLSISSLTSDIGSQVIFDVSSCAIQDPTKGWTIGQGRRVANLYVL 500
Query: 790 ----NPMQKGTCNPVHRQTPKLWHQRLGH 864
+PM+ + LWH+RLGH
Sbjct: 501 DVKSSPMKINAVVDI-----SLWHKRLGH 524
Score = 25.0 bits (53), Expect(3) = 2e-72
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 873 KVSLLFPFSANKSCNENQCPICPLAKQTRMSF 968
K+S + +K+ + C +C LAKQ ++S+
Sbjct: 532 KISEALGTTKHKNKGDAHCHVCHLAKQKKLSY 563