BLASTX nr result

ID: Forsythia22_contig00024467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00024467
         (323 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010677242.1| PREDICTED: putative late blight resistance p...    54   1e-06
ref|XP_010677304.1| PREDICTED: putative late blight resistance p...    54   2e-06
ref|XP_010677240.1| PREDICTED: putative late blight resistance p...    51   5e-06

>ref|XP_010677242.1| PREDICTED: putative late blight resistance protein homolog R1A-3
           [Beta vulgaris subsp. vulgaris]
           gi|731332507|ref|XP_010677243.1| PREDICTED: putative
           late blight resistance protein homolog R1A-3 [Beta
           vulgaris subsp. vulgaris] gi|870860305|gb|KMT11658.1|
           hypothetical protein BVRB_5g105980 [Beta vulgaris subsp.
           vulgaris]
          Length = 1165

 Score = 53.5 bits (127), Expect(2) = 1e-06
 Identities = 26/59 (44%), Positives = 33/59 (55%)
 Frame = -1

Query: 191 IEVLRNKLGFLITFLGDTPSQHIELEETKNLLTDIRALVNTVGSFVYTFFVKETAAHMN 15
           +E +R  L FL+TFLGD P QH + E+ K L  DI  L N  G   Y  FV +T   +N
Sbjct: 208 VEEVREGLCFLLTFLGDEPLQHNKFEKVKELWVDIEVLANKAGEICYMIFVDKTDGDVN 266



 Score = 25.4 bits (54), Expect(2) = 1e-06
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 321 QLSKTALNPNELLAAFIDFLHQIFEEI 241
           QLS T ++ +++L  F+DFL   F+E+
Sbjct: 147 QLSNTLMS-HQILGIFVDFLRSSFDEL 172


>ref|XP_010677304.1| PREDICTED: putative late blight resistance protein homolog R1B-17
           [Beta vulgaris subsp. vulgaris]
          Length = 515

 Score = 53.5 bits (127), Expect(2) = 2e-06
 Identities = 26/59 (44%), Positives = 33/59 (55%)
 Frame = -1

Query: 191 IEVLRNKLGFLITFLGDTPSQHIELEETKNLLTDIRALVNTVGSFVYTFFVKETAAHMN 15
           +E +R  L FL+TFLGD P QH + E+ K L  DI  L N  G   Y  FV +T   +N
Sbjct: 104 VEEVREGLCFLLTFLGDEPLQHNKFEKVKELWVDIEVLANKAGEICYMIFVDKTDGDVN 162



 Score = 24.6 bits (52), Expect(2) = 2e-06
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 321 QLSKTALNPNELLAAFIDFLHQIFEEI 241
           QLS T ++ +++L  FIDF+   F+E+
Sbjct: 43  QLSNTLMS-HQILGVFIDFVRCFFDEL 68


>ref|XP_010677240.1| PREDICTED: putative late blight resistance protein homolog R1A-3
           [Beta vulgaris subsp. vulgaris]
           gi|870860303|gb|KMT11656.1| hypothetical protein
           BVRB_5g105960 [Beta vulgaris subsp. vulgaris]
          Length = 1165

 Score = 51.2 bits (121), Expect(2) = 5e-06
 Identities = 25/59 (42%), Positives = 32/59 (54%)
 Frame = -1

Query: 191 IEVLRNKLGFLITFLGDTPSQHIELEETKNLLTDIRALVNTVGSFVYTFFVKETAAHMN 15
           +E +R  L FL+TFLGD P QH + E+ K L  DI  L N  G   Y  FV +    +N
Sbjct: 208 VEEVREGLCFLLTFLGDEPLQHNKFEKVKELWVDIEVLANKAGEICYMIFVDKRDGDVN 266



 Score = 25.4 bits (54), Expect(2) = 5e-06
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 321 QLSKTALNPNELLAAFIDFLHQIFEEI 241
           QLS T ++ +++L  F+DFL   F+E+
Sbjct: 147 QLSNTLMS-HQILGIFVDFLRSSFDEL 172


Top