BLASTX nr result
ID: Forsythia22_contig00021961
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00021961
(568 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera] 113 7e-23
emb|CAB75932.1| putative protein [Arabidopsis thaliana] 111 2e-22
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera] 110 6e-22
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 106 6e-21
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 106 8e-21
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera] 105 1e-20
gb|AIC77183.1| polyprotein [Gossypium barbadense] 103 4e-20
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera] 103 5e-20
gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein ... 100 4e-19
emb|CAN78655.1| hypothetical protein VITISV_010042 [Vitis vinifera] 100 4e-19
gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis c... 100 6e-19
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle... 100 6e-19
ref|XP_010039206.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-li... 99 2e-18
gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halle... 99 2e-18
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi... 98 3e-18
gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis c... 97 5e-18
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle... 97 5e-18
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle... 97 5e-18
emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera] 97 5e-18
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 96 1e-17
>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
Length = 1278
Score = 113 bits (282), Expect = 7e-23
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Frame = -1
Query: 529 DSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTIN 350
D IT+++ K+ KW + M+E+I +IEKN +W+L LP + IG+ WV+K K N DG ++
Sbjct: 755 DPITFQEAIKDLKWHKAMNEEIGSIEKNNSWELVELPKGQKSIGVKWVYKTKLNKDGGVD 814
Query: 349 KYKEY*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKW---LEVVSNKCQIS---- 191
KYK + +G F YK V F+ +K V+S Q S
Sbjct: 815 KYKAX-----------LVAKGYKQEFGVDYKXV--FAPVAKLDTIXLVLSMAAQNSWSIH 861
Query: 190 -------XXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFV 32
E+YI PPG+VK+G + +VYK KALYGLKQ+ RAWY I+ YF+
Sbjct: 862 QLDVKSAFLHGXLEEEVYIDQPPGYVKQGYENQVYKLKKALYGLKQAPRAWYSRIDAYFI 921
Query: 31 KLDFQICPFD 2
+ F CP++
Sbjct: 922 EEGFIKCPYE 931
>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 111 bits (278), Expect = 2e-22
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 13/187 (6%)
Frame = -1
Query: 529 DSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTIN 350
D I ++ K++ W + M+ +I +I KN TW+LT LP +PIG+ WV+K K N DG ++
Sbjct: 826 DPIQFDDAVKDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVD 885
Query: 349 KYKEY*L*GIQAKRR*RLQRGICSHF*T*Y-------------KSVDYFSCCSKWLEVVS 209
KYK + +G + Y +++ S W E+
Sbjct: 886 KYKAR-----------LVAKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNW-EIFQ 933
Query: 208 NKCQISXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVK 29
+ + E+Y++ P GF+++GE+ +VYK KALYGLKQ+ RAWY I YF+K
Sbjct: 934 LDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLK 993
Query: 28 LDFQICP 8
+F+ CP
Sbjct: 994 EEFERCP 1000
>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
Length = 1088
Score = 110 bits (274), Expect = 6e-22
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Frame = -1
Query: 553 QVSSLGGEDSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIK 374
Q++ D TY+ + EKW M+++I AIE+N TW+LT LPS IG+ W+FK K
Sbjct: 569 QLALFTDSDPTTYDDAVRSEKWRLAMNQEIEAIERNNTWELTDLPSGGKTIGVKWIFKTK 628
Query: 373 TNTDGTINKYKEY*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKWLEVVSNKCQI 194
N +G ++KYK + +G + Y V+ F+ ++ LE + +
Sbjct: 629 LNENGEVDKYKAR-----------LVAKGYSQQYGXDY--VEVFAPVAR-LETIRIVISL 674
Query: 193 SXXXXXXXXEI---------------YIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAW 59
+ ++ +++ PPG+ +KG++ +VY+ KALYGLKQ+ RAW
Sbjct: 675 AAQKDWMIYQLDVKSAFLHGEIHEEXFVEQPPGYEQKGKESKVYRLKKALYGLKQAPRAW 734
Query: 58 YG*INYYFVKLDFQICPFD 2
Y I YF+K F CP++
Sbjct: 735 YSRIESYFIKEGFNKCPYE 753
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 106 bits (265), Expect = 6e-21
Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Frame = -1
Query: 529 DSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTIN 350
D T+E KE KW + MD +I AIE+N TW+L+ LP IG+ WV+K K +G ++
Sbjct: 781 DPTTFESAVKESKWRKAMDAEIAAIERNDTWELSELPKGHKTIGVKWVYKTKLKENGEVD 840
Query: 349 KYKEY*L*GIQAKRR*RLQRGICSHF*T*YKS-------------VDYFSCCSKW----L 221
KYK + +G F YK V + + W L
Sbjct: 841 KYKAR-----------LVAKGYKQEFGVDYKEVFAPVARHDTIRLVIALAAQNSWPIFQL 889
Query: 220 EVVSNKCQISXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INY 41
+V S + ++++ PPG++K + +VY+ KALYGLKQ+ RAWY I
Sbjct: 890 DVXS-----AFLHGNLEEQVFVDQPPGYIKVKNEHKVYRLKKALYGLKQAPRAWYSRIEA 944
Query: 40 YFVKLDFQICPFD 2
YF+K FQ CP++
Sbjct: 945 YFLKEGFQKCPYE 957
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 106 bits (264), Expect = 8e-21
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Frame = -1
Query: 550 VSSLGGEDSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKT 371
V L ++I++E+ +++KW MDE+I AI++N TW+LT LP PIG+ W+FK K
Sbjct: 829 VCLLADAENISFEEAVRDKKWQTAMDEEIKAIDRNNTWELTELPEGSQPIGVKWIFKKKM 888
Query: 370 NTDGTINKYK-EY*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKWLEVVSNKCQI 194
N G I +YK G + K + +DY + + + + + I
Sbjct: 889 NAQGEIERYKARLVAKGYKQK-----------------EGIDYDEVFAPVVRMETIRLLI 931
Query: 193 S-----------------XXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSR 65
S E+YI+ PPG++K GE+ +V K KALYGLKQ+ R
Sbjct: 932 SQAAQFKWPIFQMDVKSAFLNGVLEEEVYIEQPPGYMKIGEEKKVLKLKKALYGLKQAPR 991
Query: 64 AWYG*INYYFVKLDFQICPFD 2
AW I+ YF + F+ CP++
Sbjct: 992 AWNTRIDTYFKENGFKQCPYE 1012
>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
Length = 1246
Score = 105 bits (263), Expect = 1e-20
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Frame = -1
Query: 556 IQVSSLGGEDSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKI 377
+ ++ + D I YE+ KW MD +IN+IEKN TW LT LP+ IG+ W++K
Sbjct: 741 LNMALVASTDPINYEEVVMSSKWRLAMDSEINSIEKNQTWKLTDLPTGAKTIGVKWIYKT 800
Query: 376 KTNTDGTINKYKEY*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKWLEVVSNK-- 203
K N G ++KYK + AK Q+G+ F Y V + + + +
Sbjct: 801 KLNELGEVDKYKA----RLVAKGY-SQQQGV--DFTKIYAPVARMDTVRMIVALTAQRGW 853
Query: 202 ------CQISXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INY 41
+ + ++Y+ P G+ KKG + +VYK +KALYGLKQ+ RAW+ I
Sbjct: 854 TIYQLDVKSAFLNGELNEDVYVDQPKGYEKKGSEHKVYKLHKALYGLKQAPRAWFSRIEA 913
Query: 40 YFVKLDFQICP 8
YF+ FQ CP
Sbjct: 914 YFISEGFQKCP 924
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 103 bits (258), Expect = 4e-20
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Frame = -1
Query: 529 DSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTIN 350
D +TYE+ + KW + MDE+I AI +N TW+LT LP SPIG+ WV+K KTN +G +
Sbjct: 856 DPVTYEEAIENNKWKKAMDEEIAAIRRNDTWELTSLPEGHSPIGVKWVYKTKTNKEGKVE 915
Query: 349 KYKEY*L*GIQAKRR*RLQRGICSHF*T*YKSVDYF------SCCSKWLEVVSNKCQISX 188
KYK + AK + Q +D + KW ++ + +
Sbjct: 916 KYKA----RLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAVAAQYKW-KIYQMDVKSAF 970
Query: 187 XXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLDFQICP 8
E+YI+ PPG+ +G++ +VY+ K+LYGLKQ+ RAW I+ YF + F P
Sbjct: 971 LNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAPRAWNTRIDEYFRRNGFIKSP 1030
Query: 7 FD 2
+
Sbjct: 1031 HE 1032
>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
Length = 1084
Score = 103 bits (257), Expect = 5e-20
Identities = 64/190 (33%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Frame = -1
Query: 529 DSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTIN 350
D T+E+ + KW MD +I AIE N TW+LT LP IG+ WVFK K N +G ++
Sbjct: 598 DPTTFEEAVQSSKWRAXMDLEIEAIEXNXTWELTDLPEGVKKIGVKWVFKTKLNENGKVD 657
Query: 349 KYKEY*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKW--------------LEVV 212
K K + +G Y V F+ ++W V
Sbjct: 658 KCKAR-----------LVAKGYAQQHGIDYTEV--FAPVARWDTIRMVIALAARNGWSVY 704
Query: 211 SNKCQISXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFV 32
+ + ++I+ P G+ KKGE+ +VYK KALYGLKQ+ RAWY I YF+
Sbjct: 705 QLDVKSAFLHGELNEAVFIEQPQGYEKKGEEHKVYKLKKALYGLKQAPRAWYSRIEAYFI 764
Query: 31 KLDFQICPFD 2
K F+ C D
Sbjct: 765 KEGFERCSCD 774
>gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1150
Score = 100 bits (249), Expect = 4e-19
Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Frame = -1
Query: 517 YEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTINKY-K 341
+ + + ++W+Q +E+I++I KN TW+L LP PIG+ WVFKIK N+DG+INKY
Sbjct: 643 FNEAKESKEWIQAFEEEIHSITKNDTWNLMELPLGIKPIGLKWVFKIKRNSDGSINKYMA 702
Query: 340 EY*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKWLEVVSNKCQISXXXXXXXXEI 161
G K Q + + S E+ +I+ +
Sbjct: 703 RLVAKGYVQKYGVDFQEVFAPVARIETRCLLVNLVASNGWEIHHLDVKIAFLHGELKETV 762
Query: 160 YIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLDFQIC 11
Y+ P GF +KG + +VYK NKALYGL+Q+SRAW +N +L F+ C
Sbjct: 763 YVTQPKGFKEKGHEDKVYKLNKALYGLRQASRAWNNKLNRVLKELKFEKC 812
>emb|CAN78655.1| hypothetical protein VITISV_010042 [Vitis vinifera]
Length = 870
Score = 100 bits (249), Expect = 4e-19
Identities = 62/189 (32%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Frame = -1
Query: 529 DSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTIN 350
D +E KE KW +TMD +I AIE+N TW+L LP + IG+ WV+K K +G ++
Sbjct: 360 DPTIFETAVKEPKWRKTMDAEITAIERNDTWELCDLPKRQKTIGVKWVYKTKLKENGEVD 419
Query: 349 KYKEY*L*GIQAKRR*RLQRGICSHF*T*YKS-------------VDYFSCCSKWLEVVS 209
K+K + +G F YK V + + WL +
Sbjct: 420 KHKAR-----------LVAKGYKQEFGVDYKEVFAPVARHDTIRLVIAMAXQNSWL-IFQ 467
Query: 208 NKCQISXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVK 29
+ + E+ I PPG+ K G + +V K KALYGLKQ+ AWY I YF+
Sbjct: 468 LDVKSAFLHGDLKEEVIIDQPPGYAKLGNEHKVXKLKKALYGLKQAPWAWYNRIETYFLN 527
Query: 28 LDFQICPFD 2
FQ CP++
Sbjct: 528 EGFQKCPYE 536
>gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 100 bits (248), Expect = 6e-19
Identities = 63/187 (33%), Positives = 99/187 (52%), Gaps = 15/187 (8%)
Frame = -1
Query: 517 YEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTINKYKE 338
+E+ +++ W MDE+INAI+KN TW+L LP+ + IG+ WV+K K N+ G + +YK
Sbjct: 2 FEEAMEKKTWRNAMDEEINAIQKNDTWELVSLPNGQKAIGVKWVYKAKKNSKGEVERYK- 60
Query: 337 Y*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKWLEVV--------SNKCQI---- 194
+ + QR + + + F+ ++ LE V NK +I
Sbjct: 61 -----ARLVAKGYSQRAVIDY-------DEVFAPVAR-LETVRLIISLAPQNKWKIHQMD 107
Query: 193 ---SXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLD 23
+ E+YI+ P G++ KGE+ +V K KALYGLKQ+ RAW I+ YF + D
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEAKVLKLKKALYGLKQAPRAWNTRIDKYFKEKD 167
Query: 22 FQICPFD 2
F CP++
Sbjct: 168 FIKCPYE 174
>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 100 bits (248), Expect = 6e-19
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Frame = -1
Query: 517 YEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTINKYKE 338
+++ +++ W MDE+I AI+KN TW+L LP+ + IG+ WV+K K N+ G + +YK
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHNAIGVKWVYKAKKNSKGEVERYKA 61
Query: 337 Y*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKWLEVV-----SNKCQI------- 194
+ +G Y V C + + ++ NK +I
Sbjct: 62 R-----------LVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNKWKIHQMDVKS 110
Query: 193 SXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLDFQI 14
+ E+YI+ P G++ KGE+ +V + NKALYGLKQ+ RAW I+ YF + DF
Sbjct: 111 AFLNGDLEEEVYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRIDKYFKEKDFTK 170
Query: 13 CPFD 2
CP++
Sbjct: 171 CPYE 174
>ref|XP_010039206.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 9
[Eucalyptus grandis]
Length = 974
Score = 98.6 bits (244), Expect = 2e-18
Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Frame = -1
Query: 517 YEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTINKYKE 338
YEQ K+E W++ M+E+I IEKN TW+L P + IG+ WV+K K N +G+I K+K
Sbjct: 480 YEQAFKDEVWIKAMEEEIKMIEKNETWELVDRPEDEEIIGVKWVYKTKLNVNGSIQKHKA 539
Query: 337 Y*L*GIQAKRR*RLQRGICSHF*T--------*YKSVDYFSCCSKWLEVVSNKCQISXXX 182
+ + + LQ+ + T +++ + +W ++ + +
Sbjct: 540 WFV------AKGYLQQPGIDYTETFAPVARLDTIRALIALAAQKEW-KIYQLDVKSAFLN 592
Query: 181 XXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLDFQ 17
EIYI+ P GF+ +G++ +V K KALYGLKQ+ RAWY I+ YF+K F+
Sbjct: 593 GYLQEEIYIEQPQGFILEGQEEKVLKLKKALYGLKQAPRAWYSRIDEYFIKQGFR 647
>gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 98.6 bits (244), Expect = 2e-18
Identities = 59/184 (32%), Positives = 94/184 (51%), Gaps = 12/184 (6%)
Frame = -1
Query: 517 YEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTINKYKE 338
+++ +++ W MDE+I AI+KN TW+L LP+ + IG+ WV+K K N G + +YK
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHNAIGVKWVYKAKKNPKGEVERYKA 61
Query: 337 Y*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKWLEVV-----SNKCQI------- 194
+ +G Y V C + + ++ NK +I
Sbjct: 62 R-----------LVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNKWKIHQMDVKS 110
Query: 193 SXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLDFQI 14
+ E+YI+ P G++ KGE+ +V + NKALYGLKQ+ RAW I+ YF + DF
Sbjct: 111 AFLNGDLEEEVYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRIDKYFKEKDFIK 170
Query: 13 CPFD 2
CP++
Sbjct: 171 CPYE 174
>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 97.8 bits (242), Expect = 3e-18
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 15/187 (8%)
Frame = -1
Query: 532 EDSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTI 353
E+ E+ K+EKW++ M E++ IEKN TW++ P K+ I + W+F++KT+ G
Sbjct: 839 EEPQALEEAMKDEKWIEAMREELRMIEKNKTWEVVARPKDKNVISVKWIFRLKTDASGEA 898
Query: 352 NKYKEY*L*GIQAKRR*RL-QRGICSHF*T*YKSVDYFSCCSKW--------------LE 218
KR+ RL RG + Y ++ F+ S++ +
Sbjct: 899 ------------IKRKARLVARGFTQEYGVDY--LETFAPVSRYDTIRTIMAIAAQQGWK 944
Query: 217 VVSNKCQISXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYY 38
+ + + E+YI+ PPGF+++ E+ +V K +KALYGLKQ+ RAWYG I+ Y
Sbjct: 945 LFQMDVKSAFLNGDLEEEVYIEQPPGFIEEKEEGKVLKLHKALYGLKQAPRAWYGRIDGY 1004
Query: 37 FVKLDFQ 17
F+K F+
Sbjct: 1005 FIKNGFE 1011
>gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 286
Score = 97.1 bits (240), Expect = 5e-18
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 11/183 (6%)
Frame = -1
Query: 517 YEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTINKYKE 338
+E+ +++ W MDE+INAI+KN TW+L LP+ + IG+ WV+K K N+ G + +YK
Sbjct: 2 FEEAMEKKTWRNAMDEEINAIQKNDTWELVSLPNGQKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 337 Y*L*GIQAKRR-----------*RLQRGICSHF*T*YKSVDYFSCCSKWLEVVSNKCQIS 191
+ ++R RL+ + + + ++W ++ + +
Sbjct: 62 RLVAKGYSQRAGIDYDEVFAPVARLET---------VRLIISLAAQNEW-KIHQMDVKSA 111
Query: 190 XXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLDFQIC 11
E+YI+ P G++ KGE+ +V K KALYGLKQ+ RAW I+ YF + DF C
Sbjct: 112 FLNGDLEEEVYIEQPQGYIIKGEEDKVLKLKKALYGLKQAPRAWNTRIDKYFKEKDFIKC 171
Query: 10 PFD 2
P++
Sbjct: 172 PYE 174
>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 97.1 bits (240), Expect = 5e-18
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 15/187 (8%)
Frame = -1
Query: 517 YEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTINKYKE 338
+++ +++ W MDE+I AI+KN TW+L LP+ IG+ WV+K K N+ G + +YK
Sbjct: 2 FQEAIEKKTWKNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKG 61
Query: 337 Y*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKWLEVV--------SNKCQI---- 194
+ +G C Y V F+ ++ LE V NK +I
Sbjct: 62 R-----------LVAKGYCQRAGIDYDEV--FAPVAR-LETVRLIISLAAQNKWKIHQMD 107
Query: 193 ---SXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLD 23
+ E+YI+ P G++ KGE+ +V + KALYGLKQ+ RAW I+ YF + D
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 167
Query: 22 FQICPFD 2
F CP++
Sbjct: 168 FIKCPYE 174
>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 97.1 bits (240), Expect = 5e-18
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 15/187 (8%)
Frame = -1
Query: 517 YEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTINKYKE 338
+++ +++ W MDE+I AI+KN TW+L LP+ IG+ WV+K K N+ G + +YK
Sbjct: 2 FQEAIEKKTWKNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKG 61
Query: 337 Y*L*GIQAKRR*RLQRGICSHF*T*YKSVDYFSCCSKWLEVV--------SNKCQI---- 194
+ +G C Y V F+ ++ LE V NK +I
Sbjct: 62 R-----------LVAKGYCQRAGIDYDEV--FAPIAR-LETVRLIISLAAQNKWKIHQMD 107
Query: 193 ---SXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLD 23
+ E+YI+ P G++ KGE+ +V + KALYGLKQ+ RAW I+ YF + D
Sbjct: 108 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 167
Query: 22 FQICPFD 2
F CP++
Sbjct: 168 FIKCPYE 174
>emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]
Length = 1120
Score = 97.1 bits (240), Expect = 5e-18
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Frame = -1
Query: 517 YEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTINKYKE 338
+E+ K++KW++ M E++ IEKN TW+L P H+ IG+ WV++ K N DG++NKYK
Sbjct: 635 FEEAEKDDKWIEAMKEELRMIEKNDTWELVDRPQHRKVIGVKWVYRTKLNADGSVNKYKA 694
Query: 337 Y*L*GIQAKRR*RLQRGICSHF*T*YKS----VDYFSCCSKWLEVVSNK--------CQI 194
+ +G F + V L + + K +
Sbjct: 695 R-----------LVVKGYSQVFGVDFSEXFAPVARLDTIRMLLALTAQKGWKTYQLDVKX 743
Query: 193 SXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*INYYFVKLDFQI 14
+ EIY++ P GF KG++ +VY KALYGLKQ+ RAWY I+ + L F
Sbjct: 744 AFLNGYLQEEIYVEQPEGFQVKGQEEKVYLLKKALYGLKQAPRAWYSRIDEHLQSLGFVK 803
Query: 13 CP 8
P
Sbjct: 804 SP 805
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 95.9 bits (237), Expect = 1e-17
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 18/194 (9%)
Frame = -1
Query: 529 DSITYEQT*KEEKWVQTMDEDINAIEKNGTWDLTVLPSHKSPIGINWVFKIKTNTDGTIN 350
+ + +++ +++ W MDE+I +I+KN TW+LT LP+ IG+ WV+K K N+ G +
Sbjct: 837 EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVE 896
Query: 349 KYKEY*L*GIQAKRR*RLQRGICSHF*T*YKSVDY------------------FSCCSKW 224
+YK + + +QR +DY + +KW
Sbjct: 897 RYK------ARLVAKGYIQRA----------GIDYDEVFAPVARLETVRLIISLAAQNKW 940
Query: 223 LEVVSNKCQISXXXXXXXXEIYIK*PPGFVKKGEKFRVYKFNKALYGLKQSSRAWYG*IN 44
++ + + E+YI+ P G++ KGE+ +V + KALYGLKQ+ RAW I+
Sbjct: 941 -KIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRID 999
Query: 43 YYFVKLDFQICPFD 2
YF + DF CP++
Sbjct: 1000 KYFKEKDFIKCPYE 1013