BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00021294
         (1047 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II a...   341   4e-91
ref|XP_011097502.1| PREDICTED: DNA-directed RNA polymerases II a...   333   1e-88
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   329   2e-87
ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III ...   328   3e-87
ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II a...   328   3e-87
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a...   326   2e-86
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil...   324   7e-86
ref|XP_012469213.1| PREDICTED: DNA-directed RNA polymerases II a...   323   1e-85
ref|XP_009775519.1| PREDICTED: DNA-directed RNA polymerases II a...   323   1e-85
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [...   323   1e-85
gb|KHG28798.1| dna-directed rna polymerases i, ii, and iii subun...   323   1e-85
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II a...   323   1e-85
ref|XP_009605258.1| PREDICTED: DNA-directed RNA polymerases II a...   322   2e-85
ref|XP_009758424.1| PREDICTED: DNA-directed RNA polymerases II a...   322   4e-85
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ...   322   4e-85
gb|AES93610.2| DNA-directed RNA polymerase II [Medicago truncatula]   322   4e-85
ref|XP_009606888.1| PREDICTED: DNA-directed RNA polymerases II a...   321   5e-85
ref|XP_012080620.1| PREDICTED: DNA-directed RNA polymerases II a...   321   5e-85
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II a...   320   8e-85
ref|XP_012076737.1| PREDICTED: DNA-directed RNA polymerases II a...   320   1e-84

>ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Erythranthe guttatus] gi|848881798|ref|XP_012841244.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Erythranthe guttatus]
           gi|604328677|gb|EYU34199.1| hypothetical protein
           MIMGU_mgv1a013932mg [Erythranthe guttata]
          Length = 206

 Score =  341 bits (875), Expect = 4e-91
 Identities = 169/206 (82%), Positives = 184/206 (89%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           MV+SDEEITRL R+RK VMQML+DR Y+VGDFE+DM+K Q L KYGENMKREDLVI K L
Sbjct: 1   MVLSDEEITRLVRVRKNVMQMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINKGL 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R+N S++IY+FFPEE KVGVKTMKTYTNRMK+E VHRA+L+VQQNLTPFARTCISEISTK
Sbjct: 61  RNNSSDQIYIFFPEEPKVGVKTMKTYTNRMKEEGVHRAVLIVQQNLTPFARTCISEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAE+L+NIKEHVLVPEHQ           ERYTVKETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAEMLINIKEHVLVPEHQVLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRGHVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LKRGHVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_011097502.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Sesamum indicum] gi|747046072|ref|XP_011097515.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Sesamum indicum]
          Length = 206

 Score =  333 bits (854), Expect = 1e-88
 Identities = 170/206 (82%), Positives = 180/206 (87%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           MVMS+EEITRL RIRKTVMQML+DR Y+VG FE+DM K Q + KYGENMKREDLVI K +
Sbjct: 1   MVMSEEEITRLHRIRKTVMQMLKDRGYMVGAFEIDMPKHQFIQKYGENMKREDLVIQKGM 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
             N S++IYVFFPEE KVGVKTMKTYTNRMK+E VHRAILVVQQNLTPFARTCISEISTK
Sbjct: 61  GGNSSDQIYVFFPEEQKVGVKTMKTYTNRMKEEGVHRAILVVQQNLTPFARTCISEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIKEHVLVP+HQ           ERYTVKETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPQHQVLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  329 bits (844), Expect = 2e-87
 Identities = 166/206 (80%), Positives = 180/206 (87%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M +SDEEI RLFRIR+TVMQMLRDR Y VGDFE++MSK+Q + K+GENMKREDLVI K L
Sbjct: 1   MTLSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKAL 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R++ S++IYVFFP+E KVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI EIS K
Sbjct: 61  RNDSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIKEHVLVPEHQ           +RYTVKETQLPRIQ+TDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis] gi|587928674|gb|EXC15864.1| DNA-directed RNA
           polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  328 bits (842), Expect = 3e-87
 Identities = 164/205 (80%), Positives = 182/205 (88%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           MV+S++EITRLFRIR+TVMQMLRDR+Y+VGDFE++M+K+Q  NKYGENMKREDL+I K  
Sbjct: 1   MVLSEDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSR 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R++  ++IYVFFPEE KVGVKTMKTY NRMK ENV RA+LVVQQNLTPFARTCISEISTK
Sbjct: 61  RNDSPDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIKEHVLVPEHQ           ERYTVKETQLPRIQ+TDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYV 333
           LKRG VVKIIRPSETAGRY+TYRYV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYV 205


>ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Gossypium raimondii] gi|823154631|ref|XP_012477197.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Gossypium raimondii]
           gi|728836967|gb|KHG16410.1| dna-directed rna polymerases
           i, ii, and iii subunit rpabc1 [Gossypium arboreum]
           gi|763759819|gb|KJB27150.1| hypothetical protein
           B456_004G280900 [Gossypium raimondii]
           gi|763759820|gb|KJB27151.1| hypothetical protein
           B456_004G280900 [Gossypium raimondii]
           gi|763759821|gb|KJB27152.1| hypothetical protein
           B456_004G280900 [Gossypium raimondii]
          Length = 206

 Score =  328 bits (842), Expect = 3e-87
 Identities = 163/206 (79%), Positives = 182/206 (88%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           MV+SD+EI RLFRIRKTVMQML+DR Y VGDFE+++SKQQ ++KYGENMKREDLVI K  
Sbjct: 1   MVLSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEINLSKQQFISKYGENMKREDLVINKTK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R++ S++IYVFFPEEAKVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EIS+K
Sbjct: 61  RNDNSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVN+KEH LVPEHQ            RYTVKETQLPRIQ++DPIARY+G
Sbjct: 121 FHLEVFQEAELLVNVKEHALVPEHQVLTNEEKKTLLHRYTVKETQLPRIQVSDPIARYFG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Populus euphratica]
          Length = 206

 Score =  326 bits (835), Expect = 2e-86
 Identities = 165/206 (80%), Positives = 180/206 (87%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M +++EEI RLFRIRKTVMQML+DR Y VGDFE+ M+++Q  +KYG NMKREDLVI K  
Sbjct: 1   MTLTEEEIKRLFRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R++ S++IYVFFPEEAKVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EISTK
Sbjct: 61  RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIKEHVLVPEHQ           ERYTVKETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRYVTYRYV+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVI 206


>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score =  324 bits (830), Expect = 7e-86
 Identities = 161/206 (78%), Positives = 181/206 (87%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           MV+SD+EI RLFRIRKTVMQML+DR Y VGDFE+ M+K Q ++KYGENMKREDLVI K  
Sbjct: 1   MVLSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R++ S++IYVFFP+EAKVGVKTMKTYTNRMK ENV RA+LVVQQNLTPFARTCI+EIS+K
Sbjct: 61  RNDNSDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQE+ELLVN+KEH LVPEHQ           +RYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_012469213.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Gossypium raimondii] gi|763739700|gb|KJB07199.1|
           hypothetical protein B456_001G007200 [Gossypium
           raimondii]
          Length = 206

 Score =  323 bits (829), Expect = 1e-85
 Identities = 159/206 (77%), Positives = 182/206 (88%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           MV+SD+EI RLFRIRKTV+Q+L+DRDY VGDFE++MS++Q ++K+GENMKREDLVI K  
Sbjct: 1   MVLSDDEIRRLFRIRKTVLQLLKDRDYFVGDFEINMSREQFISKFGENMKREDLVINKAK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R++ S++IYVFFPEE KVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EIS+K
Sbjct: 61  RNDSSDQIYVFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQE ELLVN+KEH LVPEHQ           +RYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQETELLVNVKEHSLVPEHQVLTTEEKKTLLQRYTVKETQLPRIQVSDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_009775519.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Nicotiana sylvestris] gi|698573867|ref|XP_009775520.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like [Nicotiana sylvestris]
          Length = 206

 Score =  323 bits (829), Expect = 1e-85
 Identities = 163/206 (79%), Positives = 180/206 (87%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M +S+EE++RLFR+RKT+M+ML DR Y+VG+FE++MSK Q L KYG+NMKREDLVI K  
Sbjct: 1   MTLSEEELSRLFRVRKTLMEMLADRGYLVGEFEINMSKHQFLQKYGDNMKREDLVIQKAK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R+N SE+IYVFFPEEAKVGVKTMKTYT RMK E+V +AILVVQQNLTPFARTCISEISTK
Sbjct: 61  RNNSSEQIYVFFPEEAKVGVKTMKTYTERMKKEDVFQAILVVQQNLTPFARTCISEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIK HVLVPEHQ           ERYTVKETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 206

 Score =  323 bits (829), Expect = 1e-85
 Identities = 164/206 (79%), Positives = 179/206 (86%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M +++EEI RL RIRKTVMQML+DR Y VGDFE+ M+++Q  +KYG NMKREDLVI K  
Sbjct: 1   MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R++ S++IYVFFPEEAKVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EISTK
Sbjct: 61  RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIKEHVLVPEHQ           ERYTVKETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRYVTYRYV+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVI 206


>gb|KHG28798.1| dna-directed rna polymerases i, ii, and iii subunit rpabc1
           [Gossypium arboreum]
          Length = 206

 Score =  323 bits (828), Expect = 1e-85
 Identities = 158/206 (76%), Positives = 182/206 (88%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           MV+SD+EI RLFRIRKTV+Q+L+DRDY VGDFE++MS++Q ++K+GENMKREDL+I K  
Sbjct: 1   MVLSDDEIRRLFRIRKTVLQLLKDRDYFVGDFEINMSREQFISKFGENMKREDLIINKAK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R++ S++IYVFFPEE KVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EIS+K
Sbjct: 61  RNDSSDQIYVFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQE ELLVN+KEH LVPEHQ           +RYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQETELLVNVKEHSLVPEHQVLTTEEKKTLLQRYTVKETQLPRIQVSDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
           vinifera] gi|225445172|ref|XP_002284110.1| PREDICTED:
           DNA-directed RNA polymerases II and IV subunit 5A [Vitis
           vinifera]
          Length = 206

 Score =  323 bits (828), Expect = 1e-85
 Identities = 163/206 (79%), Positives = 181/206 (87%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M  S+EEI+RLFRIRKTVMQML+DR Y VGDFE++M+K Q ++K+GENMKREDLVI K  
Sbjct: 1   MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R++ S++IYVFFPEE KVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EISTK
Sbjct: 61  RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIKEHVLVPEHQ           ERYTVKETQLPRIQ++DPIARY+G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_009605258.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Nicotiana tomentosiformis]
           gi|697192348|ref|XP_009605259.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like [Nicotiana
           tomentosiformis]
          Length = 206

 Score =  322 bits (826), Expect = 2e-85
 Identities = 162/206 (78%), Positives = 180/206 (87%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M +S+EE++RLFR+RKT+M+ML DR Y+VG+FE++MSK Q L KYG+NMKREDLVI K  
Sbjct: 1   MTLSEEELSRLFRVRKTLMEMLADRGYLVGEFEINMSKHQFLQKYGDNMKREDLVIQKAK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R+N SE+IYVFFPEEAKVGVKTMKTYT RMK E+V ++ILVVQQNLTPFARTCISEISTK
Sbjct: 61  RNNSSEQIYVFFPEEAKVGVKTMKTYTERMKKEDVFQSILVVQQNLTPFARTCISEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIK HVLVPEHQ           ERYTVKETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_009758424.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           isoform X1 [Nicotiana sylvestris]
           gi|698523238|ref|XP_009758425.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Nicotiana sylvestris]
          Length = 206

 Score =  322 bits (824), Expect = 4e-85
 Identities = 163/206 (79%), Positives = 178/206 (86%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M + +EE++RLFR+RKT+M+ML DR Y+VG+FE++MSK Q L KYGENMKREDLVI K  
Sbjct: 1   MTLPEEELSRLFRVRKTLMEMLADRGYLVGEFEINMSKHQFLQKYGENMKREDLVIQKAK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R+N SE IYVFFPEEAKVGVKTMKTYT RMK E+V +AILVVQQNLTPFARTCISEISTK
Sbjct: 61  RNNSSELIYVFFPEEAKVGVKTMKTYTERMKKEDVFQAILVVQQNLTPFARTCISEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIK HVLVPEHQ           ERYTVKETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula]
          Length = 410

 Score =  322 bits (824), Expect = 4e-85
 Identities = 160/206 (77%), Positives = 180/206 (87%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           MV S+EEITRL+RIRKTVMQML+DR+Y+VGDFE++MSK    +KYGENMKREDLVI K  
Sbjct: 205 MVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTK 264

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           +  PS++IYVFFPEEAKVGVKTMKTYTNRM  ENV+RAILV Q +LTPFA+TC+SEI++K
Sbjct: 265 KDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASK 324

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIKEHVLVPEHQ           ERYTVKETQLPRIQ+TDP+ARYYG
Sbjct: 325 FHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYG 384

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRYVTYR+VV
Sbjct: 385 LKRGQVVKIIRPSETAGRYVTYRFVV 410


>gb|AES93610.2| DNA-directed RNA polymerase II [Medicago truncatula]
          Length = 206

 Score =  322 bits (824), Expect = 4e-85
 Identities = 160/206 (77%), Positives = 180/206 (87%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           MV S+EEITRL+RIRKTVMQML+DR+Y+VGDFE++MSK    +KYGENMKREDLVI K  
Sbjct: 1   MVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           +  PS++IYVFFPEEAKVGVKTMKTYTNRM  ENV+RAILV Q +LTPFA+TC+SEI++K
Sbjct: 61  KDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIKEHVLVPEHQ           ERYTVKETQLPRIQ+TDP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRYVTYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206


>ref|XP_009606888.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           isoform X1 [Nicotiana tomentosiformis]
           gi|697106108|ref|XP_009606889.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Nicotiana tomentosiformis]
           gi|697106110|ref|XP_009606890.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Nicotiana tomentosiformis]
           gi|697106112|ref|XP_009606891.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Nicotiana tomentosiformis]
          Length = 206

 Score =  321 bits (823), Expect = 5e-85
 Identities = 162/206 (78%), Positives = 179/206 (86%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M +S+EE++RLFR+R+T+M+ML DR Y+VG+FE++MSK Q L KYGENMKR+DLVI K  
Sbjct: 1   MTLSEEELSRLFRVRRTLMEMLADRGYLVGEFEINMSKHQFLQKYGENMKRDDLVIQKAK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R+N SE IYVFFPEEAKVGVKTMKTYT RMK E+V +AILVVQQNLTPFARTCISEISTK
Sbjct: 61  RNNSSELIYVFFPEEAKVGVKTMKTYTERMKKEDVFQAILVVQQNLTPFARTCISEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAELLVNIK HVLVPEHQ           ERYTVKETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_012080620.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Jatropha curcas] gi|802658502|ref|XP_012080621.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like [Jatropha curcas]
           gi|643720408|gb|KDP30787.1| hypothetical protein
           JCGZ_13730 [Jatropha curcas]
          Length = 206

 Score =  321 bits (823), Expect = 5e-85
 Identities = 158/206 (76%), Positives = 183/206 (88%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M +S++EI RLFRIRKTVMQML+DR Y+V D+E++M+++Q ++KYGENMKREDLVI K  
Sbjct: 1   MTLSEDEIKRLFRIRKTVMQMLKDRGYLVTDYEINMTREQFISKYGENMKREDLVINKSR 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R+ PS++IYVFFPEE KVGVKTMKTYTNRMK+ENV+RA+LVVQQNLTPFARTCISEI++K
Sbjct: 61  RNEPSDQIYVFFPEEQKVGVKTMKTYTNRMKNENVYRAVLVVQQNLTPFARTCISEIASK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           F LEVFQEAELLVNIKEHVLVPEHQ           ERYTVKETQLPRIQ+TDPIARY+G
Sbjct: 121 FQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYFG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRFVV 206


>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Solanum lycopersicum]
          Length = 206

 Score =  320 bits (821), Expect = 8e-85
 Identities = 159/206 (77%), Positives = 179/206 (86%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M +S+EE+++LFR+RKT+M+ML DR Y+VGDFE++MSK Q L KYGENMKREDLVI K  
Sbjct: 1   MALSEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAK 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R+N S++IYVFFPEE KVGVKTMKTYT RMK E+V +AIL+VQQNLTPFARTCISEISTK
Sbjct: 61  RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           FHLEVFQEAE+LVNIK HVL+PEHQ           ERYTVKETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_012076737.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Jatropha curcas] gi|643724505|gb|KDP33706.1|
           hypothetical protein JCGZ_07277 [Jatropha curcas]
          Length = 206

 Score =  320 bits (820), Expect = 1e-84
 Identities = 156/206 (75%), Positives = 183/206 (88%)
 Frame = -2

Query: 947 MVMSDEEITRLFRIRKTVMQMLRDRDYIVGDFEVDMSKQQLLNKYGENMKREDLVIIKDL 768
           M +S++EI +LFRIRKTVMQML+DR Y+V D+E++M+++Q ++KYGENMKREDLVI K  
Sbjct: 1   MTLSEDEIKKLFRIRKTVMQMLKDRGYLVTDYEINMTREQFISKYGENMKREDLVINKSR 60

Query: 767 RSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTK 588
           R+ PS++IY+FFPEE KVGVKTMKTYTNRMK+ENV+RAILVVQQNLTPFARTCI+EI++K
Sbjct: 61  RNEPSDQIYIFFPEEQKVGVKTMKTYTNRMKNENVYRAILVVQQNLTPFARTCIAEIASK 120

Query: 587 FHLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYG 408
           F LEVFQEAELLVNIKEHVLVPEHQ           ERYTVKETQLPR+Q+TDPIARYYG
Sbjct: 121 FQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRVQVTDPIARYYG 180

Query: 407 LKRGHVVKIIRPSETAGRYVTYRYVV 330
           LKRG VVKIIRPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRFVV 206