BLASTX nr result
ID: Forsythia22_contig00021019
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia22_contig00021019 (1902 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011083427.1| PREDICTED: RNA pseudouridine synthase 2, chl... 585 e-164 ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chl... 577 e-161 gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythra... 575 e-161 ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chl... 563 e-157 emb|CDP07347.1| unnamed protein product [Coffea canephora] 561 e-157 ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl... 560 e-156 ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chl... 559 e-156 ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chl... 557 e-155 ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chl... 552 e-154 ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chl... 541 e-151 ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chl... 539 e-150 ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chl... 538 e-150 ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chl... 536 e-149 ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chl... 536 e-149 ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 522 e-145 ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 520 e-144 ref|XP_007017900.1| Pseudouridine synthase family protein isofor... 518 e-144 ref|XP_011034961.1| PREDICTED: RNA pseudouridine synthase 2, chl... 518 e-144 ref|XP_010533976.1| PREDICTED: RNA pseudouridine synthase 2, chl... 514 e-142 ref|XP_008445320.1| PREDICTED: RNA pseudouridine synthase 2, chl... 513 e-142 >ref|XP_011083427.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Sesamum indicum] Length = 445 Score = 585 bits (1509), Expect = e-164 Identities = 310/431 (71%), Positives = 349/431 (80%), Gaps = 3/431 (0%) Frame = -2 Query: 1769 SAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSR-QVSGRLNKFSGIKLEE 1593 SAK L INPR+ +L ++ I TAC S S +A + ESD + SGR N +SG+K+EE Sbjct: 11 SAKPLPINPRNLSLRKI--ISTACAYSK--SYAAANSESDDFQGPFSGRPNNYSGVKIEE 66 Query: 1592 TVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVVREGDTVNCTI 1413 V LD GKLRLDSW+SSRING+SRARVQSSIRSGLVSVNG V+ KVSHVVR+GD VNCTI Sbjct: 67 KVELDSGKLRLDSWISSRINGISRARVQSSIRSGLVSVNGHVIDKVSHVVRDGDVVNCTI 126 Query: 1412 AELQPLRAEAEDIPLDIVYEDEHLLVVNKAA--HMVVHPAPGNATGTLVNGILHHCRLPT 1239 AELQPLRAEAEDIPLDIVYEDEH+LVVNK +VVHPAPGNA+GTLVNGIL HCRL T Sbjct: 127 AELQPLRAEAEDIPLDIVYEDEHVLVVNKPVLQFVVVHPAPGNASGTLVNGILRHCRLST 186 Query: 1238 VSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDKGTSGLLVV 1059 V NPE E S S DQ N GIGSGL E+ VRPGIVHRLDKGTSGLLVV Sbjct: 187 VCL-NPEAQPEIVDDSEDEVSAFSVDQGENVGIGSGLYESSVRPGIVHRLDKGTSGLLVV 245 Query: 1058 AKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRMSAAPGLNT 879 AKDE+SHA LAEQFK+ TIKRVYVSLTCGVPSP RI++PIGRD NNR+RM A PG T Sbjct: 246 AKDEHSHACLAEQFKERTIKRVYVSLTCGVPSPATGRIDVPIGRDANNRIRMIAIPGSAT 305 Query: 878 RQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDEVYGGTKSM 699 KAR+A SRYKVIEILA GGC+LVEWRLETGRTHQIRAHAKYIGVPLLGD+VYGGTKSM Sbjct: 306 HGKARHAVSRYKVIEILAGGGCALVEWRLETGRTHQIRAHAKYIGVPLLGDDVYGGTKSM 365 Query: 698 ALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPPADFAEILS 519 A+SLLQS+NP + HRQ+ QLV +++RPCLHA SLGFRHPN+GE+L FS++PPADFAEIL Sbjct: 366 AMSLLQSKNPPTTHRQLLQLVERLDRPCLHAFSLGFRHPNSGEDLRFSQIPPADFAEILD 425 Query: 518 QLRDISTEKVT 486 +LRDI +K T Sbjct: 426 RLRDIGAKKGT 436 >ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Erythranthe guttatus] gi|604297299|gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Erythranthe guttata] Length = 422 Score = 577 bits (1486), Expect = e-161 Identities = 307/441 (69%), Positives = 350/441 (79%), Gaps = 1/441 (0%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQ-VS 1632 MLS +L+W+SI K INPR+ A ++ +A P+SI A +SD S+ +S Sbjct: 1 MLSLQSLNWSSI---KPFPINPRNPAFWRLLSTSSAY----PDSIPADYSDSDDSQDSIS 53 Query: 1631 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1452 GR N FSG K+EETV LD KLR+DSW+SSRING+SRARVQSSIRSGLVSVNG V+SKVS Sbjct: 54 GRPNNFSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVS 113 Query: 1451 HVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1272 HVVR+GD+VNCTIAELQPLRAE E+IPLDIVYED+HLLVVNK AHMVVHPAPGNA GTLV Sbjct: 114 HVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLV 173 Query: 1271 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 1092 NGILHHCRL TV F NPE L D D E+ VRPGIVHR Sbjct: 174 NGILHHCRLSTVCF-NPESLPDNID-----------DDDSIDEATVFPSESSVRPGIVHR 221 Query: 1091 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 912 LDKGTSGLLVVAKDE+SH+HLAEQFKKHT+KRVYVSLTCGVPSPV R++IPIGRD NNR Sbjct: 222 LDKGTSGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNR 281 Query: 911 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 732 +RM A PG KAR+A SRYKV+EILA GGC+LVEWRLETGRTHQIRAHAKY+G+PLL Sbjct: 282 IRMVAIPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLL 341 Query: 731 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 552 GD+VYGGTK MALS LQS+N SS++ QI QLVAK+ERP LHALSLGFRHP+ GE+LHFS+ Sbjct: 342 GDDVYGGTKHMALSQLQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHKGEDLHFSQ 401 Query: 551 LPPADFAEILSQLRDISTEKV 489 +PP DFAEIL LR+IS+EKV Sbjct: 402 MPPFDFAEILDCLRNISSEKV 422 >gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythranthe guttata] Length = 432 Score = 575 bits (1483), Expect = e-161 Identities = 306/441 (69%), Positives = 350/441 (79%), Gaps = 1/441 (0%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQ-VS 1632 MLS +L+W+SI K INPR+ A ++ +A P+SI A +SD S+ +S Sbjct: 1 MLSLQSLNWSSI---KPFPINPRNPAFWRLLSTSSAY----PDSIPADYSDSDDSQDSIS 53 Query: 1631 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1452 GR N FSG K+EETV LD KLR+DSW+SSRING+SRARVQSSIRSGLVSVNG V+SKVS Sbjct: 54 GRPNNFSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVS 113 Query: 1451 HVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1272 HVVR+GD+VNCTIAELQPLRAE E+IPLDIVYED+HLLVVNK AHMVVHPAPGNA GTLV Sbjct: 114 HVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLV 173 Query: 1271 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 1092 NGILHHCRL TV F NPE L D D E+ VRPGIVHR Sbjct: 174 NGILHHCRLSTVCF-NPESLPDNID-----------DDDSIDEATVFPSESSVRPGIVHR 221 Query: 1091 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 912 LDKGTSGLLVVAKDE+SH+HLAEQFKKHT+KRVYVSLTCGVPSPV R++IPIGRD NNR Sbjct: 222 LDKGTSGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNR 281 Query: 911 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 732 +RM A PG KAR+A SRYKV+EILA GGC+LVEWRLETGRTHQIRAHAKY+G+PLL Sbjct: 282 IRMVAIPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLL 341 Query: 731 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 552 GD+VYGGTK MALS LQS+N SS++ QI QLVAK+ERP LHALSLGFRHP+ GE+LHFS+ Sbjct: 342 GDDVYGGTKHMALSQLQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHKGEDLHFSQ 401 Query: 551 LPPADFAEILSQLRDISTEKV 489 +PP DFAEIL LR+IS+EK+ Sbjct: 402 MPPFDFAEILDCLRNISSEKM 422 >ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana sylvestris] Length = 431 Score = 563 bits (1450), Expect = e-157 Identities = 291/421 (69%), Positives = 335/421 (79%), Gaps = 1/421 (0%) Frame = -2 Query: 1748 NPRHSALSQVQRIVTACFCSNPNSISARDPESDGS-RQVSGRLNKFSGIKLEETVGLDFG 1572 NP+ + S+V + F P D +SD S +++GR + +SG+KLEETV + G Sbjct: 15 NPKPFSFSRVSSFIFRAFSKFPG-----DSDSDDSPSEITGRRSNYSGVKLEETVDVKTG 69 Query: 1571 KLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVVREGDTVNCTIAELQPLR 1392 KLRLDSW+SSRING+SRARVQSSIRSGLVSVNGRV KVSH V+ GD VNCTIA+L+PLR Sbjct: 70 KLRLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLR 129 Query: 1391 AEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVNGILHHCRLPTVSFFNPEVL 1212 AE EDIPLDIVYED+H+LVVNK AHMVVHPAPGNATGTLV+GILHHC LPTVSF EVL Sbjct: 130 AEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVL 189 Query: 1211 XXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDKGTSGLLVVAKDENSHAH 1032 E + STDQ G S +CE VRPGIVHRLDKGTSGLLVVAK E S A+ Sbjct: 190 SDVEDDSDDELNLFSTDQSPYGVDSSVVCEPSVRPGIVHRLDKGTSGLLVVAKTEQSLAN 249 Query: 1031 LAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRMSAAPGLNTRQKARYAAS 852 LAEQFKKHTIKRVYVS+TCGVP+ V RI+IPIGRD NNR+RM A PG + +AR AAS Sbjct: 250 LAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMIAIPGSHKGGRARNAAS 309 Query: 851 RYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDEVYGGTKSMALSLLQSRN 672 RYKVIE LA GG +LVEWRLETGRTHQIRAHAKY+G+PLLGDEVYGGTK+MALSLLQ + Sbjct: 310 RYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLQPKT 369 Query: 671 PSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPPADFAEILSQLRDISTEK 492 P H ++ QL++ IERPCLHAL+LGFRHP TGEN+HF++LPPADFAE+LS+LR ISTEK Sbjct: 370 PPRSHGKLSQLISGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLSELRAISTEK 429 Query: 491 V 489 V Sbjct: 430 V 430 >emb|CDP07347.1| unnamed protein product [Coffea canephora] Length = 442 Score = 561 bits (1445), Expect = e-157 Identities = 291/446 (65%), Positives = 339/446 (76%), Gaps = 6/446 (1%) Frame = -2 Query: 1805 LSPNALSWTSIPSAKAL-SINPRHSALSQVQRIVTACFCS-----NPNSISARDPESDGS 1644 LS N +SWTS+PS KAL +I P+ ++ + R+V C+ NP IS R Sbjct: 4 LSLNTISWTSLPSTKALKNIIPKPLSVISLSRLVNVKACTTSAGGNPQPISDR------- 56 Query: 1643 RQVSGRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVV 1464 R FSG+KL+ETV + KLRLDSW+SSRI+G+SRARVQSSIRSGLVSVNGR++ Sbjct: 57 -----RTINFSGVKLQETVDVKSEKLRLDSWVSSRIHGISRARVQSSIRSGLVSVNGRII 111 Query: 1463 SKVSHVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNAT 1284 +KVSH+VR GD VNCTI+ELQ LRAE EDIPLDIVYED+HLLVVNK AHMVVHPAPGN + Sbjct: 112 NKVSHMVRGGDKVNCTISELQQLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNTS 171 Query: 1283 GTLVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPG 1104 GTLVNGILHHC LP +S + EV EF NGG S EA +RPG Sbjct: 172 GTLVNGILHHCSLPMLSLASEEVHLEPEDASDDEFIAFPRAPKDNGGASSRTSEASIRPG 231 Query: 1103 IVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRD 924 IVHRLDKGTSGLLVVAKDE+SH+HLAEQFK TIKRVYVSLTCGVPSPV R++IP+GRD Sbjct: 232 IVHRLDKGTSGLLVVAKDEHSHSHLAEQFKNRTIKRVYVSLTCGVPSPVSGRVDIPVGRD 291 Query: 923 LNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIG 744 NNR+RM+ G QK R AASRY V+E+LA GG +LVEW+LETGRTHQIR HAKY+G Sbjct: 292 SNNRIRMAVFDGSTHSQKTRNAASRYSVVEVLAGGGSALVEWKLETGRTHQIRVHAKYMG 351 Query: 743 VPLLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENL 564 VPL+GDE+YGGTK MALSLLQ R PSSF ++QL+ K+ERPCLHALSLGF HP T EN+ Sbjct: 352 VPLMGDELYGGTKGMALSLLQPRTPSSFRENLQQLICKLERPCLHALSLGFTHPYTLENM 411 Query: 563 HFSKLPPADFAEILSQLRDISTEKVT 486 HFS++PPADFAEIL+QLRDI EKV+ Sbjct: 412 HFSQMPPADFAEILTQLRDIRAEKVS 437 >ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Solanum tuberosum] Length = 431 Score = 560 bits (1444), Expect = e-156 Identities = 290/441 (65%), Positives = 345/441 (78%), Gaps = 1/441 (0%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSR-QVS 1632 ML+ N S++ +P NP+ +LS+V + F P D +SD S ++ Sbjct: 1 MLALNTTSFSLLPQ------NPKPFSLSRVSSFICRAFTKFPG-----DSDSDDSPDEIP 49 Query: 1631 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1452 GR + +SG+KLEETV GKLRLDSW+SSRI+GVSRARVQSSIRSGLVSVNGRV KVS Sbjct: 50 GRRSNYSGVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109 Query: 1451 HVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1272 H+V+ GD V+CTIA+L+PLRAE EDIPLDIV+EDEH+LVVNK AHMVVHPAPGNATGTLV Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGTLV 169 Query: 1271 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 1092 +GILHHC LPT+SF EVL E + S ++ N S +CE+ VRPGIVHR Sbjct: 170 SGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVMCESSVRPGIVHR 229 Query: 1091 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 912 LDKGTSGLLVVAK+ENS A LAEQFKKHTIKRVYVS+TCGVP+ V R++IPIGRD NNR Sbjct: 230 LDKGTSGLLVVAKNENSLASLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNR 289 Query: 911 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 732 +RM+A PG K+R+A SRYKVIE LA GG +LVEWRLETGRTHQIRAHAKY+G+PL+ Sbjct: 290 IRMAAIPGTPKSGKSRHAVSRYKVIEKLARGGSALVEWRLETGRTHQIRAHAKYLGIPLM 349 Query: 731 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 552 GDEVYGGTK+MALSLLQ + P FH ++ QLV++I+RPCLHAL+LGFRHP TGEN+HF++ Sbjct: 350 GDEVYGGTKNMALSLLQPKTPPMFHGKLSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 409 Query: 551 LPPADFAEILSQLRDISTEKV 489 LPP DFAEILS LR I+TEKV Sbjct: 410 LPPPDFAEILSYLRAINTEKV 430 >ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Solanum lycopersicum] Length = 436 Score = 559 bits (1440), Expect = e-156 Identities = 290/442 (65%), Positives = 346/442 (78%), Gaps = 1/442 (0%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSR-QVS 1632 M++ N S++ +P NP+ +LS+V + F P D +SD S ++ Sbjct: 1 MVALNTTSFSLLPQ------NPKPISLSRVSSFICRAFTKFPG-----DSDSDDSPDEIP 49 Query: 1631 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1452 GR + +SG+KLEETV GKLRLDSW+SSRI+GVSRARVQSSIRSGLVSVNGRV KVS Sbjct: 50 GRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109 Query: 1451 HVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1272 H+V+ GD V+CTIA+L+PLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAPGNATGTLV Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV 169 Query: 1271 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 1092 +GILHHC LPTVSF EVL E + S ++ N S +CE+ VRPGIVHR Sbjct: 170 SGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHR 229 Query: 1091 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 912 LDKGTSGLLVVAK+E+S A LAEQFKKHTIKRVYVS+TCGVP+ V R++IPIGRD NNR Sbjct: 230 LDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNR 289 Query: 911 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 732 +RM+A PG K+R+A SRYKVIE LA GG +LVEWRLETGRTHQIRAHAK++G+PL+ Sbjct: 290 IRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLM 349 Query: 731 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 552 GDEVYGGTK+MALSLLQ + P FH ++ QLV++I+RPCLHAL+LGFRHP TGEN+HF++ Sbjct: 350 GDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 409 Query: 551 LPPADFAEILSQLRDISTEKVT 486 LPP DFAEILS+LR I TEKVT Sbjct: 410 LPPPDFAEILSELRAIKTEKVT 431 >ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Solanum lycopersicum] Length = 431 Score = 557 bits (1435), Expect = e-155 Identities = 289/441 (65%), Positives = 345/441 (78%), Gaps = 1/441 (0%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSR-QVS 1632 M++ N S++ +P NP+ +LS+V + F P D +SD S ++ Sbjct: 1 MVALNTTSFSLLPQ------NPKPISLSRVSSFICRAFTKFPG-----DSDSDDSPDEIP 49 Query: 1631 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1452 GR + +SG+KLEETV GKLRLDSW+SSRI+GVSRARVQSSIRSGLVSVNGRV KVS Sbjct: 50 GRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109 Query: 1451 HVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1272 H+V+ GD V+CTIA+L+PLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAPGNATGTLV Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV 169 Query: 1271 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 1092 +GILHHC LPTVSF EVL E + S ++ N S +CE+ VRPGIVHR Sbjct: 170 SGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHR 229 Query: 1091 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 912 LDKGTSGLLVVAK+E+S A LAEQFKKHTIKRVYVS+TCGVP+ V R++IPIGRD NNR Sbjct: 230 LDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNR 289 Query: 911 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 732 +RM+A PG K+R+A SRYKVIE LA GG +LVEWRLETGRTHQIRAHAK++G+PL+ Sbjct: 290 IRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLM 349 Query: 731 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 552 GDEVYGGTK+MALSLLQ + P FH ++ QLV++I+RPCLHAL+LGFRHP TGEN+HF++ Sbjct: 350 GDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 409 Query: 551 LPPADFAEILSQLRDISTEKV 489 LPP DFAEILS+LR I TEKV Sbjct: 410 LPPPDFAEILSELRAIKTEKV 430 >ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana tomentosiformis] Length = 431 Score = 552 bits (1423), Expect = e-154 Identities = 284/421 (67%), Positives = 330/421 (78%), Gaps = 1/421 (0%) Frame = -2 Query: 1748 NPRHSALSQVQRIVTACFCSNPNSISARDPESDGSR-QVSGRLNKFSGIKLEETVGLDFG 1572 NP+ + S+V + F P D +SD S ++ R + +SG+KLEETV + G Sbjct: 15 NPKPFSFSRVSSFIIRAFSKFPG-----DSDSDDSPDEIQSRKSNYSGVKLEETVDIKTG 69 Query: 1571 KLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVVREGDTVNCTIAELQPLR 1392 KLRLDSW+SSRI+G+SRARVQSSIRSGLVSVNGRV KVSH V+ GD VNCTIA+L+PLR Sbjct: 70 KLRLDSWVSSRIDGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLR 129 Query: 1391 AEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVNGILHHCRLPTVSFFNPEVL 1212 AE EDIPLDIVYED+H+LVVNK AHMVVHPAPGN TGTLV+GILHHC LPT+SF EVL Sbjct: 130 AEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNVTGTLVSGILHHCSLPTISFPGEEVL 189 Query: 1211 XXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDKGTSGLLVVAKDENSHAH 1032 E + S DQ NG S + E +RPGIVHRLDKGTSGLLVVAK E S A+ Sbjct: 190 SDVEDASGDELNMFSADQSPNGVDASRMYEPSIRPGIVHRLDKGTSGLLVVAKTEQSLAN 249 Query: 1031 LAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRMSAAPGLNTRQKARYAAS 852 LAEQFKKHTIKRVYVS+TCGVP+ V RI+IPIGRD NNR+RM A PG + +AR AAS Sbjct: 250 LAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHKGGRARNAAS 309 Query: 851 RYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDEVYGGTKSMALSLLQSRN 672 RYKVIE LA GG +LVEWRLETGRTHQIRAHAKY+G+PLLGDEVYGGTK+MALSLLQ + Sbjct: 310 RYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLQPKT 369 Query: 671 PSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPPADFAEILSQLRDISTEK 492 P H + QL++ IERPCLHAL+LGFRHP TGEN+HF++LPPADFAE+L++LR ISTEK Sbjct: 370 PPRSHGNLSQLISGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLTELRAISTEK 429 Query: 491 V 489 V Sbjct: 430 V 430 >ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3 [Solanum lycopersicum] Length = 430 Score = 541 bits (1393), Expect = e-151 Identities = 284/442 (64%), Positives = 340/442 (76%), Gaps = 1/442 (0%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSR-QVS 1632 M++ N S++ +P NP+ +LS+V + F P D +SD S ++ Sbjct: 1 MVALNTTSFSLLPQ------NPKPISLSRVSSFICRAFTKFPG-----DSDSDDSPDEIP 49 Query: 1631 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1452 GR + +SG+KLEETV GKLRLDSW+SSRI+GVSRARVQSSIRSGLVSVNGRV KVS Sbjct: 50 GRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109 Query: 1451 HVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1272 H+V+ GD V+CTIA+L+PLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAPGNATGTLV Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV 169 Query: 1271 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 1092 +GILHHC LPTVSF EVL E + S ++ N S +CE+ VRPGIVHR Sbjct: 170 SGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHR 229 Query: 1091 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 912 LDKGTSGLLVVAK+E+S A LAEQFKKHTIKRVYVS+TCGVP+ V R++IPIGRD NNR Sbjct: 230 LDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNR 289 Query: 911 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 732 +RM+A PG K+R+A SRYKVIE LA GG +LVEWRLETGRTHQ ++G+PL+ Sbjct: 290 IRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQ------HLGIPLM 343 Query: 731 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 552 GDEVYGGTK+MALSLLQ + P FH ++ QLV++I+RPCLHAL+LGFRHP TGEN+HF++ Sbjct: 344 GDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 403 Query: 551 LPPADFAEILSQLRDISTEKVT 486 LPP DFAEILS+LR I TEKVT Sbjct: 404 LPPPDFAEILSELRAIKTEKVT 425 >ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Vitis vinifera] gi|302141717|emb|CBI18920.3| unnamed protein product [Vitis vinifera] Length = 433 Score = 539 bits (1388), Expect = e-150 Identities = 287/446 (64%), Positives = 339/446 (76%), Gaps = 7/446 (1%) Frame = -2 Query: 1808 MLSPNALSWTSIP--SAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQV 1635 + S N+ S+ SI S AL + S+V RI+ AC S + + V Sbjct: 2 IFSLNSASFFSISHTSQSALLFPRNPKSCSRVFRILRACSNSTDEPLVS----------V 51 Query: 1634 SGRLNKFSGIKLEETV---GLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVV 1464 SGR ++G++LEETV D GKLRLDSW+SSRI G+SRARVQSSIRSGLVSVN R+V Sbjct: 52 SGRRTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIV 111 Query: 1463 SKVSHVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNAT 1284 KVSHV+R GD VNCTI+ELQPLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAPGNA+ Sbjct: 112 DKVSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNAS 171 Query: 1283 GTLVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQ--DYNGGIGSGLCEAYVR 1110 GTLVNGILHHC LPTV+ N + E +S D+ + G G CE +R Sbjct: 172 GTLVNGILHHCSLPTVALPNRD----------SEEDDISDDEFNSFAAGQNCGTCETNIR 221 Query: 1109 PGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIG 930 PGIVHRLDKGTSGLLVVAKDE+SHAHL+EQFK H+I RVY+SLT GVP+P+ R+EIP+G Sbjct: 222 PGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVG 281 Query: 929 RDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKY 750 RD NNR+RM+A PG + +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKY Sbjct: 282 RDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKY 341 Query: 749 IGVPLLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGE 570 +G+PLLGDEVYGGTK+MALSLL+ R PSS H Q+ QLV++++RPCLHA++LGF HP TG+ Sbjct: 342 LGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGK 401 Query: 569 NLHFSKLPPADFAEILSQLRDISTEK 492 N+HFS PP DFAEILS LR ISTEK Sbjct: 402 NVHFSCQPPEDFAEILSWLRKISTEK 427 >ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Nelumbo nucifera] Length = 471 Score = 538 bits (1385), Expect = e-150 Identities = 279/443 (62%), Positives = 336/443 (75%), Gaps = 3/443 (0%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQVS- 1632 ML P S++S+PSA +L + L + R T+ F N + ES Q S Sbjct: 1 MLPP---SYSSVPSANSLYNSSSFYLLHRSPRASTSRFFRVLNCSFSSTGESASDYQSSE 57 Query: 1631 --GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSK 1458 R F+G+ LE+TV + K R+DSW+SSRI G+SRARVQSSI+SGLVSVNGR++ K Sbjct: 58 PQNRRGNFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDK 117 Query: 1457 VSHVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGT 1278 VSHV+R GD VNCTI ELQPLRAE EDIPLDIVYEDE +LVVNK AHMVVHPAPGNA GT Sbjct: 118 VSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGT 177 Query: 1277 LVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIV 1098 LVNGILHHC LP V+ N +VL E S+ Q + S +CE VRPGIV Sbjct: 178 LVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIV 237 Query: 1097 HRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLN 918 HRLDKGTSGLLVVAKDE+SHAHL+EQFK HTI R+Y+SLTCGVPS RIE+PIGRDL+ Sbjct: 238 HRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLS 297 Query: 917 NRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVP 738 NR+RM+A P N+ ++AR+AASRY+V+E+LA GG +LVEWRLETGRTHQIRAHAKY+G+P Sbjct: 298 NRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIP 357 Query: 737 LLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHF 558 LLGDEVYGGT++MALSLL++R+ SSFH + QLV+K++RPCLHA +LGF+HP+TGEN+ F Sbjct: 358 LLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQF 417 Query: 557 SKLPPADFAEILSQLRDISTEKV 489 S PPADF E+LSQLR I EKV Sbjct: 418 SCPPPADFTEVLSQLRSIGIEKV 440 >ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3 [Nelumbo nucifera] Length = 443 Score = 536 bits (1381), Expect = e-149 Identities = 278/442 (62%), Positives = 335/442 (75%), Gaps = 3/442 (0%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQVS- 1632 ML P S++S+PSA +L + L + R T+ F N + ES Q S Sbjct: 1 MLPP---SYSSVPSANSLYNSSSFYLLHRSPRASTSRFFRVLNCSFSSTGESASDYQSSE 57 Query: 1631 --GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSK 1458 R F+G+ LE+TV + K R+DSW+SSRI G+SRARVQSSI+SGLVSVNGR++ K Sbjct: 58 PQNRRGNFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDK 117 Query: 1457 VSHVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGT 1278 VSHV+R GD VNCTI ELQPLRAE EDIPLDIVYEDE +LVVNK AHMVVHPAPGNA GT Sbjct: 118 VSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGT 177 Query: 1277 LVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIV 1098 LVNGILHHC LP V+ N +VL E S+ Q + S +CE VRPGIV Sbjct: 178 LVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIV 237 Query: 1097 HRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLN 918 HRLDKGTSGLLVVAKDE+SHAHL+EQFK HTI R+Y+SLTCGVPS RIE+PIGRDL+ Sbjct: 238 HRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLS 297 Query: 917 NRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVP 738 NR+RM+A P N+ ++AR+AASRY+V+E+LA GG +LVEWRLETGRTHQIRAHAKY+G+P Sbjct: 298 NRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIP 357 Query: 737 LLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHF 558 LLGDEVYGGT++MALSLL++R+ SSFH + QLV+K++RPCLHA +LGF+HP+TGEN+ F Sbjct: 358 LLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQF 417 Query: 557 SKLPPADFAEILSQLRDISTEK 492 S PPADF E+LSQLR I EK Sbjct: 418 SCPPPADFTEVLSQLRSIGIEK 439 >ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Nelumbo nucifera] Length = 453 Score = 536 bits (1381), Expect = e-149 Identities = 278/442 (62%), Positives = 335/442 (75%), Gaps = 3/442 (0%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQVS- 1632 ML P S++S+PSA +L + L + R T+ F N + ES Q S Sbjct: 1 MLPP---SYSSVPSANSLYNSSSFYLLHRSPRASTSRFFRVLNCSFSSTGESASDYQSSE 57 Query: 1631 --GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSK 1458 R F+G+ LE+TV + K R+DSW+SSRI G+SRARVQSSI+SGLVSVNGR++ K Sbjct: 58 PQNRRGNFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDK 117 Query: 1457 VSHVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGT 1278 VSHV+R GD VNCTI ELQPLRAE EDIPLDIVYEDE +LVVNK AHMVVHPAPGNA GT Sbjct: 118 VSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGT 177 Query: 1277 LVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIV 1098 LVNGILHHC LP V+ N +VL E S+ Q + S +CE VRPGIV Sbjct: 178 LVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIV 237 Query: 1097 HRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLN 918 HRLDKGTSGLLVVAKDE+SHAHL+EQFK HTI R+Y+SLTCGVPS RIE+PIGRDL+ Sbjct: 238 HRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLS 297 Query: 917 NRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVP 738 NR+RM+A P N+ ++AR+AASRY+V+E+LA GG +LVEWRLETGRTHQIRAHAKY+G+P Sbjct: 298 NRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIP 357 Query: 737 LLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHF 558 LLGDEVYGGT++MALSLL++R+ SSFH + QLV+K++RPCLHA +LGF+HP+TGEN+ F Sbjct: 358 LLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQF 417 Query: 557 SKLPPADFAEILSQLRDISTEK 492 S PPADF E+LSQLR I EK Sbjct: 418 SCPPPADFTEVLSQLRSIGIEK 439 >ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus sinensis] Length = 421 Score = 522 bits (1345), Expect = e-145 Identities = 275/441 (62%), Positives = 333/441 (75%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQVSG 1629 MLS N+ SW S K L +P V +I+ A S+ + + R+P Sbjct: 3 MLSLNSASWGSASCTKGLQFSPTKIPFG-VFKILRARCSSSSSGGNNREP---------- 51 Query: 1628 RLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSH 1449 + ++G++LEETV GKLRLD+W+SSRI+G+SRARVQSSIRSGLVS+NG+VVSKVSH Sbjct: 52 -IANYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSH 110 Query: 1448 VVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVN 1269 V+ GD VNCTI+ELQPLRAEAEDIPLDIVYED+++LVVNK AHMVVHPAPGNATGTLVN Sbjct: 111 NVKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVN 170 Query: 1268 GILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRL 1089 GILHHC LPT++ N E +S D++++ I A +RPGIVHRL Sbjct: 171 GILHHCSLPTLASSNQEAFSDA--------EDISDDEEFSSSISG----ASIRPGIVHRL 218 Query: 1088 DKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRL 909 DKGTSGLLVVAKDE+SHAHL+EQFK HTI+RVY+SLT GVPS RIE+PI RD NNR+ Sbjct: 219 DKGTSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRI 278 Query: 908 RMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLG 729 RM+A PG N +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKY+G+PLLG Sbjct: 279 RMAAIPGSNKHGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLG 338 Query: 728 DEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKL 549 DEVYGGTK+MA SLLQ R H ++ +LV+ ++RPCLHA++LGF HP+T E + FS Sbjct: 339 DEVYGGTKNMAKSLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCP 398 Query: 548 PPADFAEILSQLRDISTEKVT 486 PPADFAEILSQLR+I TEK++ Sbjct: 399 PPADFAEILSQLREIGTEKLS 419 >ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1| pseudouridine synthase family protein [Populus trichocarpa] Length = 444 Score = 520 bits (1338), Expect = e-144 Identities = 286/444 (64%), Positives = 339/444 (76%) Frame = -2 Query: 1817 SQEMLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQ 1638 S+ MLS +++S S PS LS P S L V +S S R+P S+ Q Sbjct: 27 SKRMLSISSVSRCSAPSF-FLSQKPTASRLLTV------------HSSSTREPNSN---Q 70 Query: 1637 VSGRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSK 1458 G+ +SG+KLEE+V GK RLDSW+SSRI+G+SRARVQSSI+SGLVSVNG+V+ K Sbjct: 71 NPGQRINYSGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDK 130 Query: 1457 VSHVVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGT 1278 VSH V+ GD VNC I+ELQPLRAE E+IPLDIVYEDE++LVVNK AHMVVHPAPGNATGT Sbjct: 131 VSHNVKAGDKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGT 190 Query: 1277 LVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIV 1098 LVNGILHHC LPTVS + EVL +S D D G+ S A VRPGIV Sbjct: 191 LVNGILHHCSLPTVS--SQEVLSGA--------EDVSDDDD--EGLCSSSYAASVRPGIV 238 Query: 1097 HRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLN 918 HRLDKGTSGLLVVAKDE+SHAHL+EQFK HTIKRVYVSLTCGVP+P+ RI++PIGRD++ Sbjct: 239 HRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVS 298 Query: 917 NRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVP 738 NR+RM+A N R +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKYIG+P Sbjct: 299 NRIRMAAIVEPN-RGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIP 357 Query: 737 LLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHF 558 LLGDEVYGGT++MALSLL+SR S HRQ+ ++ +ERPCLHAL+LGF HP TG+ +HF Sbjct: 358 LLGDEVYGGTQNMALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHF 417 Query: 557 SKLPPADFAEILSQLRDISTEKVT 486 S PP DF EILSQLR++ TEK++ Sbjct: 418 SCPPPPDFTEILSQLREMGTEKLS 441 >ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] gi|508723228|gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] Length = 433 Score = 518 bits (1335), Expect = e-144 Identities = 273/438 (62%), Positives = 321/438 (73%), Gaps = 1/438 (0%) Frame = -2 Query: 1796 NALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQVSGRLNK 1617 ++ S PS KA I+P LS + S AR ++ Sbjct: 3 SSYSCCPFPSTKAFQISPSFVFLSPRYPKLLPFTLSGILRARARPSSGCAAKTQEPIRTS 62 Query: 1616 FSGIKLEETV-GLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVVR 1440 ++G++LEETV G GKLRLDSW+SSRI G+SRARVQSSI+SGLV+VNGRVV KVSH +R Sbjct: 63 YTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHGLR 122 Query: 1439 EGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVNGIL 1260 GD VNC I+ELQPLRAE EDIPLDIVYED+H+LVVNK HMVVHPAPGNATGTLVNGIL Sbjct: 123 HGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVNGIL 182 Query: 1259 HHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDKG 1080 HHC LPTV+ EVL T D G A VRPGIVHRLDKG Sbjct: 183 HHCSLPTVALSEKEVLS----------DTEDVSDDDEGFCYGASAAASVRPGIVHRLDKG 232 Query: 1079 TSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRMS 900 TSGLLVVAKDE+SH+HL+EQFK+HTI+RVY+SLTCGVPSP R++I IGRD NNR+RM Sbjct: 233 TSGLLVVAKDEHSHSHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDISIGRDSNNRVRMI 292 Query: 899 AAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDEV 720 A PGLN +AR+AASRYKVIE+LA GG +L++WRLETGRTHQIRAHAKY+G+PLLGDEV Sbjct: 293 AVPGLNHHGRARHAASRYKVIEVLAGGGSALIQWRLETGRTHQIRAHAKYMGIPLLGDEV 352 Query: 719 YGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPPA 540 YGGTKSMALSLL+ R P +++ Q+ +LV+++ERP LHAL LGF HP++ E +HFS PP Sbjct: 353 YGGTKSMALSLLRPRTPPNYNDQLSRLVSRLERPYLHALVLGFEHPHSREMMHFSCQPPP 412 Query: 539 DFAEILSQLRDISTEKVT 486 DFAEILS LR I TEK T Sbjct: 413 DFAEILSDLRKIGTEKPT 430 >ref|XP_011034961.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Populus euphratica] Length = 416 Score = 518 bits (1334), Expect = e-144 Identities = 283/439 (64%), Positives = 334/439 (76%) Frame = -2 Query: 1808 MLSPNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQVSG 1629 MLS +++S S PS LS P S L V +S S R+P S+ Q G Sbjct: 1 MLSISSVSRCSAPSF-FLSQKPTASRLLTV------------HSSSTREPNSN---QNPG 44 Query: 1628 RLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSH 1449 +SG+KLEE+V GK RLDSW+SSRI+G+SRARVQSSI+SGLVSVNG+V+ KVSH Sbjct: 45 ERINYSGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVSH 104 Query: 1448 VVREGDTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVN 1269 V+ GD VNC I+ELQPLRAE E+IPLDIVYEDE++LVVNK AHMVVHPAPGNATGTLVN Sbjct: 105 NVKAGDKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGTLVN 164 Query: 1268 GILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRL 1089 GILHHC LPTVS + EVL +D D + G+ S A VRPGIVHRL Sbjct: 165 GILHHCSLPTVS--SQEVLSGAEDV---------SDDDDDEGLCSSSHAASVRPGIVHRL 213 Query: 1088 DKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRL 909 DKGTSGLLVVAKDE+SHAHL+EQFK HTIKRVYVSLTCGVP+P+ RI++PIGRD++NR+ Sbjct: 214 DKGTSGLLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNRI 273 Query: 908 RMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLG 729 RM+A N R +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKYIG+PLLG Sbjct: 274 RMAAIAEPN-RGQARHAASRYKVIEILARGGSALVEWRLETGRTHQIRAHAKYIGIPLLG 332 Query: 728 DEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKL 549 DEVYGGT++MALSLL+SR S HRQ+ ++ +ERPCLHAL+LGF HP TG+ +HF+ Sbjct: 333 DEVYGGTQNMALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHFACP 392 Query: 548 PPADFAEILSQLRDISTEK 492 PP DF EILSQLR++ TEK Sbjct: 393 PPPDFTEILSQLREMGTEK 411 >ref|XP_010533976.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Tarenaya hassleriana] Length = 435 Score = 514 bits (1323), Expect = e-142 Identities = 277/436 (63%), Positives = 330/436 (75%) Frame = -2 Query: 1793 ALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISARDPESDGSRQVSGRLNKF 1614 +L +S S+ + S++ S +V R V + P+S R PE +S R + Sbjct: 17 SLRSSSSSSSSSSSLSVLFSFFPRVSRFVRSS-SGIPDSDRVRRPE------ISPRASN- 68 Query: 1613 SGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVVREG 1434 +G+K +ETV + GK+RLDSW+SSR++GVSRARVQSSIR GLV VNGRVV KVSH V+ G Sbjct: 69 AGVKFQETVDVATGKIRLDSWISSRVHGVSRARVQSSIRLGLVCVNGRVVDKVSHNVKAG 128 Query: 1433 DTVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVNGILHH 1254 D V+CTI+ELQPL+AE ED+PLDIVYED H+LVVNK AHMVVHPAPGN GTLVNGILHH Sbjct: 129 DMVSCTISELQPLKAEPEDMPLDIVYEDNHVLVVNKPAHMVVHPAPGNPNGTLVNGILHH 188 Query: 1253 CRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDKGTS 1074 C LP V++ + EV + S D++ + S A VRPGIVHRLDKGTS Sbjct: 189 CSLPIVAYSDTEV--------DPDEEDFSEDEET---MSSSAYSASVRPGIVHRLDKGTS 237 Query: 1073 GLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRMSAA 894 GLLVVAKDE+SHAHLAEQFK+HTI+RVYVSLTCGVPSP RI IPIGRDLNNR+RM+A Sbjct: 238 GLLVVAKDEHSHAHLAEQFKQHTIERVYVSLTCGVPSPSHGRIVIPIGRDLNNRIRMAAI 297 Query: 893 PGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDEVYG 714 PGL+ R +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKY+GVPLLGDEVYG Sbjct: 298 PGLSNRGRARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYVGVPLLGDEVYG 357 Query: 713 GTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPPADF 534 TKSMALSLLQ R + H QI +LV++++RPCLHAL LGF+HP TGE++ FS PP DF Sbjct: 358 ATKSMALSLLQKRASRNDHGQILELVSRLDRPCLHALVLGFKHPCTGEDVKFSCPPPPDF 417 Query: 533 AEILSQLRDISTEKVT 486 AE L LR + TEKV+ Sbjct: 418 AETLGMLRKLGTEKVS 433 >ref|XP_008445320.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Cucumis melo] Length = 429 Score = 513 bits (1321), Expect = e-142 Identities = 271/434 (62%), Positives = 330/434 (76%), Gaps = 3/434 (0%) Frame = -2 Query: 1778 SIPSAKALSINPR--HSALSQVQRIVTACFCSNPNSISARDPESDG-SRQVSGRLNKFSG 1608 S+ SA+ + +P H + +R + + + S+R + D S S R+ ++G Sbjct: 3 SVCSARTIQASPSSIHFFFPRNRRRIDSNVLRFSANFSSRCSDYDEYSEAQSERIANYAG 62 Query: 1607 IKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVVREGDT 1428 +LEETV ++ GK+RLDSW+SSRING+SRARVQSSIR+GLVSVNGRV+ KVSH V+ GD Sbjct: 63 TRLEETVDINPGKVRLDSWISSRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDV 122 Query: 1427 VNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVNGILHHCR 1248 +NCTI+ELQPLRAE EDI LDIVYEDEH+LVVNK AHMVVHPAPGNATGTLVN IL+HC Sbjct: 123 INCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCS 182 Query: 1247 LPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDKGTSGL 1068 LP VS E S +S D+ + + S + EA +RPGIVHRLDKGTSGL Sbjct: 183 LPMVSTSTGE---------HQSDSDVSDDEFSSIEVFSRVSEAPIRPGIVHRLDKGTSGL 233 Query: 1067 LVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRMSAAPG 888 LVVAKDE+SHAHL+ QFK+H+I+RVY+SLTCGVP RIEIPI RD NNR+RM+A G Sbjct: 234 LVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEIPICRDPNNRIRMTATHG 293 Query: 887 LNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDEVYGGT 708 A++AASRY V+EILA GG SLVEWRLETGRTHQIRAHAKY+G+PLLGDEVYGGT Sbjct: 294 TKNNPHAKHAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGT 353 Query: 707 KSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPPADFAE 528 KSMA+SLL++R S+ H Q+ QLV+ +ERPCLHAL+LGF HP+TG+N+ FS PP DFAE Sbjct: 354 KSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAE 413 Query: 527 ILSQLRDISTEKVT 486 ILSQLR+I T+KVT Sbjct: 414 ILSQLREIGTKKVT 427