BLASTX nr result

ID: Forsythia22_contig00019981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00019981
         (1187 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341001.1| PREDICTED: RCC1 domain-containing protein DD...    54   6e-06
ref|XP_006341004.1| PREDICTED: RCC1 domain-containing protein DD...    54   6e-06
ref|XP_006341005.1| PREDICTED: RCC1 domain-containing protein DD...    54   6e-06

>ref|XP_006341001.1| PREDICTED: RCC1 domain-containing protein DDB_G0279253-like isoform
           X1 [Solanum tuberosum]
          Length = 520

 Score = 53.5 bits (127), Expect(2) = 6e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 187 AASGKLITWGSADDQGQSYLTSGKHEV 107
           + SGKLITWGSADDQGQSYLTSGKH V
Sbjct: 73  SGSGKLITWGSADDQGQSYLTSGKHGV 99



 Score = 25.4 bits (54), Expect(2) = 6e-06
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 41  FITTHIKETPEPY 3
           FIT  IKETPEP+
Sbjct: 122 FITKFIKETPEPF 134


>ref|XP_006341004.1| PREDICTED: RCC1 domain-containing protein DDB_G0279253-like isoform
           X4 [Solanum tuberosum]
          Length = 457

 Score = 53.5 bits (127), Expect(2) = 6e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 187 AASGKLITWGSADDQGQSYLTSGKHEV 107
           + SGKLITWGSADDQGQSYLTSGKH V
Sbjct: 73  SGSGKLITWGSADDQGQSYLTSGKHGV 99



 Score = 25.4 bits (54), Expect(2) = 6e-06
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 41  FITTHIKETPEPY 3
           FIT  IKETPEP+
Sbjct: 122 FITKFIKETPEPF 134


>ref|XP_006341005.1| PREDICTED: RCC1 domain-containing protein DDB_G0279253-like isoform
           X5 [Solanum tuberosum]
          Length = 452

 Score = 53.5 bits (127), Expect(2) = 6e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 187 AASGKLITWGSADDQGQSYLTSGKHEV 107
           + SGKLITWGSADDQGQSYLTSGKH V
Sbjct: 73  SGSGKLITWGSADDQGQSYLTSGKHGV 99



 Score = 25.4 bits (54), Expect(2) = 6e-06
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 41  FITTHIKETPEPY 3
           FIT  IKETPEP+
Sbjct: 122 FITKFIKETPEPF 134


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