BLASTX nr result
ID: Forsythia22_contig00018658
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00018658
(648 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 167 6e-48
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 162 2e-43
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 162 2e-43
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 170 3e-43
emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana] 159 5e-43
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 160 6e-43
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 158 7e-42
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 153 2e-41
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 171 2e-41
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 167 2e-41
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 150 3e-41
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 161 3e-41
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 157 6e-41
ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 151 3e-40
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 167 3e-39
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 160 5e-39
dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Ar... 149 1e-38
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 165 2e-38
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 165 2e-38
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 165 2e-38
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 167 bits (422), Expect(2) = 6e-48
Identities = 77/130 (59%), Positives = 104/130 (80%)
Frame = -1
Query: 393 EAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQL 214
EAM++EM+SL +N+TW L+ ++R++ CKW++K +G+ +PP+YKARLVARGFTQ
Sbjct: 831 EAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPKYKARLVARGFTQR 890
Query: 213 EGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEV 34
EGVD+NE FSPVVK+ +IR++LA+VA + ELEQ+DVK AFLHG LEE I MAQP+GFE
Sbjct: 891 EGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLEEQILMAQPEGFEC 950
Query: 33 KGRFEKVCLL 4
K + + VCLL
Sbjct: 951 KDKEDYVCLL 960
Score = 51.6 bits (122), Expect(2) = 6e-48
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Frame = -2
Query: 638 QINVEETAPESPQQQQQPDLNEPKNPSLGEAHEA----QVDLQDYQLARDRERREVRPNL 471
++NVE +S +++ D + + + E HE Q DLQ+YQLARDR RREVR +
Sbjct: 734 KVNVELLTDKSSEKEAASD--DERATAESEEHEVSELPQADLQNYQLARDRVRREVRAPV 791
Query: 470 RYSSLNLIEYAL 435
RY +LI YAL
Sbjct: 792 RYGYADLIAYAL 803
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 162 bits (410), Expect(2) = 2e-43
Identities = 78/133 (58%), Positives = 100/133 (75%)
Frame = -1
Query: 399 YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 220
+ AMKEEM S+ KN TW LV K E +++ C+W++ K G+ + PR+ ARLVA+GFT
Sbjct: 831 WNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFT 890
Query: 219 QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 40
Q EGVDYNE FSPVVK+ +IR +L++V +N EL+Q+DVK AFLHG LEE IYMAQP+GF
Sbjct: 891 QKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGF 950
Query: 39 EVKGRFEKVCLLK 1
E+K KVCLLK
Sbjct: 951 EIKRGSNKVCLLK 963
Score = 41.2 bits (95), Expect(2) = 2e-43
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -2
Query: 626 EETAPESPQQQQQPDLNEPKNPSLGEAHE----AQVDLQDYQLARDRERREVRPNLRYSS 459
+ + P P LN P + E+ E A DL YQL RDR RR ++ N +Y+
Sbjct: 739 DNSNPSEATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNE 798
Query: 458 LNLIEYALAS 429
N++ +A S
Sbjct: 799 SNMVGFAYYS 808
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 162 bits (411), Expect(2) = 2e-43
Identities = 75/135 (55%), Positives = 104/135 (77%)
Frame = -1
Query: 405 INYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARG 226
+ +K A EEMDSLIKN TW LV+K +++++ C+WL+K+K G+ +P R+KARLVA+G
Sbjct: 530 LKWKNATHEEMDSLIKNGTWDLVDKPTNRKIIGCRWLFKLKSGIPGVEPVRFKARLVAKG 589
Query: 225 FTQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQ 46
+TQ EGVDY E F+PVVK+ +IRV++++V + ELEQ+DVK AFLHG+LEE +YM QP+
Sbjct: 590 YTQREGVDYQEIFAPVVKHTSIRVLMSVVVDQDMELEQMDVKTAFLHGDLEEELYMEQPE 649
Query: 45 GFEVKGRFEKVCLLK 1
GF +KVCLLK
Sbjct: 650 GFITDKTKDKVCLLK 664
Score = 40.8 bits (94), Expect(2) = 2e-43
Identities = 21/75 (28%), Positives = 42/75 (56%)
Frame = -2
Query: 632 NVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQVDLQDYQLARDRERREVRPNLRYSSLN 453
++EE +Q+P+ +P++ E++ L +YQLA+DR RR++ P R++ +
Sbjct: 445 HIEECEESDENDEQEPETVNETDPTV----ESEGSLANYQLAKDRVRRQINPPARFTEES 500
Query: 452 LIEYALASGEAENSE 408
+ +AL E+ + E
Sbjct: 501 GVAFALVVVESLSLE 515
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 170 bits (431), Expect(2) = 3e-43
Identities = 79/133 (59%), Positives = 106/133 (79%)
Frame = -1
Query: 399 YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 220
+K+A EEMDS+ KN+TW +++K E +RV+ CKW++K K G+ +PPRYKARLVA+GF+
Sbjct: 838 WKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFS 897
Query: 219 QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 40
Q EG+DY E FSPVVK+ +IR +L++V QF+ ELEQLDVK AFLHG L+E I M+QP+G+
Sbjct: 898 QREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAFLHGNLDEYILMSQPEGY 957
Query: 39 EVKGRFEKVCLLK 1
E + EKVCLLK
Sbjct: 958 EDEDSTEKVCLLK 970
Score = 32.3 bits (72), Expect(2) = 3e-43
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2
Query: 632 NVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQVDLQDYQLARDRERREVRPNLRY--SS 459
N E S Q+Q + K+ + E L++Y LARDR RR++R R+
Sbjct: 745 NQSEGGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEED 804
Query: 458 LNLIEYALASGE 423
+L+ +AL E
Sbjct: 805 DSLVGFALTMTE 816
>emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]
Length = 494
Score = 159 bits (402), Expect(2) = 5e-43
Identities = 75/133 (56%), Positives = 101/133 (75%)
Frame = -1
Query: 399 YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 220
+K A EEMDSLIKN TW LV+K + ++++ C+WL+K+K G+ +P RYKARLVA+G+T
Sbjct: 86 WKLATHEEMDSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGYT 145
Query: 219 QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 40
Q EGVDY E F+PV K+ +IR+++++V + ELEQ+DVK AFLHGELEE +YM QP GF
Sbjct: 146 QREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPDGF 205
Query: 39 EVKGRFEKVCLLK 1
+ KVCLLK
Sbjct: 206 ISEDGENKVCLLK 218
Score = 42.7 bits (99), Expect(2) = 5e-43
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = -2
Query: 626 EETAPESPQQQQQPDLNEPKNPSLGEAHEAQV--DLQDYQLARDRERREVRPNLRYSSLN 453
EE + ES ++Q+P+ P + E E Q L +YQLARDRERR++ P R++ +
Sbjct: 2 EEESDESVDEEQEPE------PQV-ELPETQTTSSLANYQLARDRERRQIHPPARFTEES 54
Query: 452 LIEYALASGEAENSE 408
+ +AL + E + E
Sbjct: 55 GVAFALVTVETLSME 69
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 160 bits (406), Expect(2) = 6e-43
Identities = 76/133 (57%), Positives = 102/133 (76%)
Frame = -1
Query: 399 YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 220
+K A EEMDSLIKN TW LV+K + ++++ C+WL+K+K G+ +P RYKARLVA+G+T
Sbjct: 85 WKLATHEEMDSLIKNGTWVLVDKPQDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGYT 144
Query: 219 QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 40
Q EGVDY E F+PVVK+ IR+++++V + ELEQ+DVK AFLHGELEE +YM QP+GF
Sbjct: 145 QREGVDYQEIFAPVVKHTFIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPEGF 204
Query: 39 EVKGRFEKVCLLK 1
+ KVCLLK
Sbjct: 205 ISEDGKNKVCLLK 217
Score = 40.8 bits (94), Expect(2) = 6e-43
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -2
Query: 626 EETAPESPQQQQQPD--LNEPKNPSLGEAHEAQVDLQDYQLARDRERREVRPNLRYSSLN 453
EE + E+ +++Q+P+ + PK + L YQLA+DRERRE+ P R++ +
Sbjct: 1 EEESDETVEEEQEPEPQVELPKTQTTSS-------LAYYQLAKDRERREIHPPARFTEES 53
Query: 452 LIEYALASGEAENSE 408
+ +AL + E + E
Sbjct: 54 GVAFALVTVETLSME 68
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 158 bits (400), Expect(2) = 7e-42
Identities = 74/133 (55%), Positives = 102/133 (76%)
Frame = -1
Query: 399 YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 220
++ AMKEEMDS K+ TW L+ K E Q+++ CKW++K+K G+ + RYKARLVA+GF+
Sbjct: 748 WENAMKEEMDSHKKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPGVEKQRYKARLVAKGFS 807
Query: 219 QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 40
Q EG+DYNE FS VVK+ +IR++L+L+ ++ELEQ+DVK AFLHG LEE I M+QP+GF
Sbjct: 808 QQEGIDYNEVFSLVVKHVSIRLMLSLMVNMDYELEQMDVKTAFLHGNLEERILMSQPEGF 867
Query: 39 EVKGRFEKVCLLK 1
+G KVCLL+
Sbjct: 868 IQEGNENKVCLLR 880
Score = 39.7 bits (91), Expect(2) = 7e-42
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -2
Query: 623 ETAPESPQQQQQPDLNEPKNPSLGEAHEAQVDLQDYQLARDRERRE-VRPNLRYSSLNLI 447
ET+ S + + + +E +G +E +D DY LARD +RR +RP R+ + +
Sbjct: 661 ETSSSSSESSENLEESEMNEEVVGSENEQSLD--DYLLARDMKRRSNIRPPSRFEDEDFV 718
Query: 446 EYALASGE 423
YALA+ E
Sbjct: 719 AYALATAE 726
>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 153 bits (387), Expect(2) = 2e-41
Identities = 72/133 (54%), Positives = 99/133 (74%)
Frame = -1
Query: 399 YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 220
+K A EE +SLIKN TW LV+K + ++++ C+WL+K+K G+ +P RYKARLVA+G+T
Sbjct: 761 WKLATHEEKNSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGYT 820
Query: 219 QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 40
Q EGVDY E F+PV K+ +IR+++++V + ELEQ+DVK FLHGELEE +YM QP GF
Sbjct: 821 QREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKTTFLHGELEEELYMEQPDGF 880
Query: 39 EVKGRFEKVCLLK 1
+ KVCLLK
Sbjct: 881 ISEDGENKVCLLK 893
Score = 43.5 bits (101), Expect(2) = 2e-41
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 638 QINVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQV--DLQDYQLARDRERREVRPNLRY 465
Q++ EE + ES ++Q+P+ P + E E Q L +YQL RDRERR++ P R+
Sbjct: 673 QVSDEEESDESVDEEQEPE------PQV-ELPETQTTSSLANYQLVRDRERRQIHPPARF 725
Query: 464 SSLNLIEYALASGEAENSE 408
+ + + +AL + E + E
Sbjct: 726 TEESGVAFALVTVETLSME 744
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 171 bits (432), Expect(2) = 2e-41
Identities = 81/130 (62%), Positives = 103/130 (79%)
Frame = -1
Query: 390 AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 211
+M +EM SL KN+TW+LV E + V CKWL+KIKDG+S +PP+YK+RLVA+GF+Q E
Sbjct: 932 SMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKE 991
Query: 210 GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 31
G+DYNE FSPVVK+K+IRV+LA+V+ FN EL+QLDVK AFLHG LEE IYM QP+GF
Sbjct: 992 GIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDS 1051
Query: 30 GRFEKVCLLK 1
+ + VC LK
Sbjct: 1052 EKSDHVCFLK 1061
Score = 25.8 bits (55), Expect(2) = 2e-41
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Frame = -2
Query: 599 QQQQPDLNEPKNPSLGEAHEAQ--VDLQDYQ-LARDRERREVRPNLRY------SSLNLI 447
Q+ + +++ P + + E Q +D D Q +A R RRE+R +RY + N +
Sbjct: 840 QKVEFEVDAPMENGVDDTSEEQPVIDQNDSQSIAAHRPRREIRRPMRYVDCVSANITNPV 899
Query: 446 EYALASGE 423
+ALA E
Sbjct: 900 AFALAVAE 907
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 167 bits (424), Expect(2) = 2e-41
Identities = 80/130 (61%), Positives = 102/130 (78%)
Frame = -1
Query: 390 AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 211
AM +EM+SL KN+TW LV + ++++ CKW++K K+G+SP + +YKAR+VARGF Q E
Sbjct: 809 AMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQRE 868
Query: 210 GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 31
GVDYNE FSPVV++ +IRV+LA+VA N ELEQLDVK AFLHGELEE IYM QP GF+V
Sbjct: 869 GVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVP 928
Query: 30 GRFEKVCLLK 1
G+ VC LK
Sbjct: 929 GKENHVCKLK 938
Score = 28.9 bits (63), Expect(2) = 2e-41
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = -2
Query: 596 QQQPDLNEPKNPSLGEAHEAQVDLQD-------YQLARDRERRE-VRPNLRYSSLNLIEY 441
Q + DL EP+ + + + D+ + +A+DR RR VRP RY +++ Y
Sbjct: 721 QNESDLKEPEEED--QEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGY 778
Query: 440 AL-ASGEAENSE 408
AL + E + SE
Sbjct: 779 ALQVAEEVDTSE 790
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 150 bits (379), Expect(2) = 3e-41
Identities = 72/133 (54%), Positives = 100/133 (75%)
Frame = -1
Query: 399 YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 220
+K A EEMDSLIKN TW LV+K ++++++ C+WL+K+K G +P RYKA+LVA+G+T
Sbjct: 861 WKLATHEEMDSLIKNGTWVLVDKPQNRKIIGCRWLFKLKSGSPGVEPVRYKAQLVAKGYT 920
Query: 219 QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 40
EGVDY E F+ VVK+ +IR+++++V + ELEQ+DVK AFLHGELEE +YM QP+G
Sbjct: 921 HREGVDYQEIFALVVKHTSIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPEGC 980
Query: 39 EVKGRFEKVCLLK 1
+ KVCLLK
Sbjct: 981 ISEDGENKVCLLK 993
Score = 45.8 bits (107), Expect(2) = 3e-41
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 638 QINVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQV--DLQDYQLARDRERREVRPNLRY 465
Q++ EE + ES +++Q+P+ E E Q L +YQLARDRERR++ P R+
Sbjct: 773 QVSDEEESDESVEEEQEPETQV-------ELPETQTTSSLANYQLARDRERRQIHPPARF 825
Query: 464 SSLNLIEYALASGEAENSE 408
+ + + +AL + E + E
Sbjct: 826 TEESGVAFALVTVETLSME 844
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 161 bits (408), Expect(2) = 3e-41
Identities = 73/135 (54%), Positives = 103/135 (76%)
Frame = -1
Query: 405 INYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARG 226
I + MKEE+DSL+KN TW +V + Q+V+ C+WL+K+K G+ + RYKARLVARG
Sbjct: 833 IKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWLFKLKPGIPGVEAQRYKARLVARG 892
Query: 225 FTQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQ 46
FTQ +G+DY E F+PVVK+ +IR++++ V + + ELEQ+DVK FLHGEL++V+YM QP+
Sbjct: 893 FTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMELEQMDVKTTFLHGELDQVLYMEQPE 952
Query: 45 GFEVKGRFEKVCLLK 1
GFEV ++VCLLK
Sbjct: 953 GFEVNPEKDQVCLLK 967
Score = 34.3 bits (77), Expect(2) = 3e-41
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -2
Query: 578 NEPKNPSLGEAHEAQVDLQDYQLARDRERREVRPNLRYSSLNLIEYALASGEAENSE 408
++ +N E A +DL +YQ ARDRERR P + + AL E SE
Sbjct: 762 SDSENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALALVMAEEIESE 818
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 157 bits (398), Expect(2) = 6e-41
Identities = 76/130 (58%), Positives = 103/130 (79%)
Frame = -1
Query: 390 AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 211
AM+EE +SL+KN TW+LV+K + +VV CKW++K K G+ +P R+KA LVA+ +TQ E
Sbjct: 476 AMQEEFESLLKNGTWQLVDKPKGCKVVGCKWVFKKKLGIPHVEPERFKATLVAKAYTQRE 535
Query: 210 GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 31
G+D+NE FSP+VK+ +IRV+LALV+ +N EL Q+DV AFLHGELEE I+M QP+GF VK
Sbjct: 536 GMDFNEIFSPMVKHTSIRVLLALVSLWNLELXQMDVNRAFLHGELEEEIFMQQPKGFIVK 595
Query: 30 GRFEKVCLLK 1
G+ +VCLLK
Sbjct: 596 GKENQVCLLK 605
Score = 37.4 bits (85), Expect(2) = 6e-41
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = -2
Query: 575 EPKNPSLGEAHEAQVDLQDYQLARDRERREVRPNLRYSSLNLIEYALASGE 423
E K+ + + + L++YQL RD RR +RP R+ +++ Y+L+ GE
Sbjct: 401 EVKDKFETKPQQYDIPLENYQLTRDGARRSIRPPQRFGYNDMVAYSLSIGE 451
>ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103833265
[Brassica rapa]
Length = 3353
Score = 151 bits (382), Expect(2) = 3e-40
Identities = 71/134 (52%), Positives = 98/134 (73%)
Frame = -1
Query: 402 NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 223
++ A EEMDSL +N TW L+ + + Q+ V CKW++K K G+ +P R+K RLVA+GF
Sbjct: 785 HWNNAADEEMDSLNRNHTWDLIERPKGQKTVGCKWIFKYKPGIPGVEPCRHKGRLVAKGF 844
Query: 222 TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 43
+Q EG+DYNE FSPVVK+ +IR++L++V ++ELEQLDVK AFLHG L+E I M QP+G
Sbjct: 845 SQKEGIDYNEVFSPVVKHVSIRLMLSIVVNRDYELEQLDVKTAFLHGNLDERILMDQPEG 904
Query: 42 FEVKGRFEKVCLLK 1
+ G KVCLL+
Sbjct: 905 YVKPGDENKVCLLR 918
Score = 151 bits (382), Expect(2) = 3e-40
Identities = 71/134 (52%), Positives = 98/134 (73%)
Frame = -1
Query: 402 NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 223
++ A EEMDSL +N TW L+ + + Q+ V CKW++K K G+ +P R+K RLVA+GF
Sbjct: 1484 HWNNAADEEMDSLNRNHTWDLIERPKGQKTVGCKWIFKYKPGIPGVEPCRHKGRLVAKGF 1543
Query: 222 TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 43
+Q EG+DYNE FSPVVK+ +IR++L++V ++ELEQLDVK AFLHG L+E I M QP+G
Sbjct: 1544 SQKEGIDYNEVFSPVVKHVSIRLMLSIVVNRDYELEQLDVKTAFLHGNLDERILMDQPEG 1603
Query: 42 FEVKGRFEKVCLLK 1
+ G KVCLL+
Sbjct: 1604 YVKPGDENKVCLLR 1617
Score = 151 bits (382), Expect(2) = 3e-40
Identities = 71/134 (52%), Positives = 98/134 (73%)
Frame = -1
Query: 402 NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 223
++ A EEMDSL +N TW L+ + + Q+ V CKW++K K G+ +P R+K RLVA+GF
Sbjct: 2860 HWNNAADEEMDSLNRNHTWDLIERPKGQKTVGCKWIFKYKPGIPGVEPCRHKGRLVAKGF 2919
Query: 222 TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 43
+Q EG+DYNE FSPVVK+ +IR++L++V ++ELEQLDVK AFLHG L+E I M QP+G
Sbjct: 2920 SQKEGIDYNEVFSPVVKHVSIRLMLSIVVNRDYELEQLDVKTAFLHGNLDERILMDQPEG 2979
Query: 42 FEVKGRFEKVCLLK 1
+ G KVCLL+
Sbjct: 2980 YVKPGDENKVCLLR 2993
Score = 41.2 bits (95), Expect(2) = 3e-40
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 635 INVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQVDLQDYQLARDRERRE-VRPNLRYSS 459
++ +++ + + + D +E + + E +E++ ++ Y LARDR RR+ V+P RY
Sbjct: 694 VSQQDSEDQGSSSESESD-DESEGLTFVEENESESSIEHYMLARDRVRRQNVKPPSRYED 752
Query: 458 LNLIEYALA 432
NL+ YAL+
Sbjct: 753 ANLVAYALS 761
Score = 41.2 bits (95), Expect(2) = 3e-40
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 635 INVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQVDLQDYQLARDRERRE-VRPNLRYSS 459
++ +++ + + + D +E + + E +E++ ++ Y LARDR RR+ V+P RY
Sbjct: 1393 VSQQDSEDQGSSSESESD-DESEGLTFVEENESESSIEHYMLARDRVRRQNVKPPSRYED 1451
Query: 458 LNLIEYALA 432
NL+ YAL+
Sbjct: 1452 ANLVAYALS 1460
Score = 41.2 bits (95), Expect(2) = 3e-40
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 635 INVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQVDLQDYQLARDRERRE-VRPNLRYSS 459
++ +++ + + + D +E + + E +E++ ++ Y LARDR RR+ V+P RY
Sbjct: 2769 VSQQDSEDQGSSSESESD-DESEGLTFVEENESESSIEHYMLARDRVRRQNVKPPSRYED 2827
Query: 458 LNLIEYALA 432
NL+ YAL+
Sbjct: 2828 ANLVAYALS 2836
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 167 bits (424), Expect = 3e-39
Identities = 79/130 (60%), Positives = 104/130 (80%)
Frame = -1
Query: 390 AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 211
AM+EEM SL KN TW+LV+ + ++ V+CKW++K K+G+SP +PPR+KARLVA+GF+Q+
Sbjct: 824 AMQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIV 883
Query: 210 GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 31
GVDYN+ FSPVVK+ +IR ++VA + ELEQLDVK AFLHGELEE IYM QP+GF V
Sbjct: 884 GVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVP 943
Query: 30 GRFEKVCLLK 1
G+ + VC LK
Sbjct: 944 GKEDYVCKLK 953
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 160 bits (405), Expect(2) = 5e-39
Identities = 72/130 (55%), Positives = 102/130 (78%)
Frame = -1
Query: 390 AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 211
AM +EM+SL KN TW+LV + ++ ++CKW++K K+G+S D RYKARL+A+G++Q+
Sbjct: 1041 AMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIP 1100
Query: 210 GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 31
G+D+N+ FSPVVK+ +IR +L++VA ++ELEQ+DVK AFLHGELEE IYM QP+GF V
Sbjct: 1101 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVP 1160
Query: 30 GRFEKVCLLK 1
G+ VC LK
Sbjct: 1161 GKENLVCRLK 1170
Score = 28.1 bits (61), Expect(2) = 5e-39
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 512 LARDRERREVRPNLRY-SSLNLIEYALASGE 423
+A+DR +R ++P RY N++ YAL+ E
Sbjct: 985 IAKDRPKRNIKPPQRYIEEANIVAYALSVAE 1015
>dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 348
Score = 149 bits (377), Expect(2) = 1e-38
Identities = 70/129 (54%), Positives = 97/129 (75%)
Frame = -1
Query: 399 YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 220
++ AMKEEMDS K+ TW L+ K E Q+++ CKW++K+K G+ + RYK RLVA+GF+
Sbjct: 220 WESAMKEEMDSHQKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPGLEKQRYKVRLVAKGFS 279
Query: 219 QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 40
Q EG+DYNE FS VVK+ +IR++L+LV ++ELEQ+DVK +FLHG LEE I M+QP+GF
Sbjct: 280 QQEGIDYNEVFSLVVKHVSIRLMLSLVVNMDYELEQMDVKTSFLHGNLEERILMSQPEGF 339
Query: 39 EVKGRFEKV 13
+G KV
Sbjct: 340 IQEGNENKV 348
Score = 37.7 bits (86), Expect(2) = 1e-38
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = -2
Query: 620 TAPESPQQQQQPDLNEPKNPSLGEAHEAQVDLQDYQLARDRERR-EVRPNLRYSSLNLIE 444
++ ES + ++ + NE + S E + L DY LAR+R+RR +RP R+ + +
Sbjct: 137 SSSESSENLEESETNEEVDGS-----ENEQSLDDYLLARERKRRSNIRPPSRFKDGDFVA 191
Query: 443 YALASGE 423
YALA+ E
Sbjct: 192 YALATEE 198
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 165 bits (418), Expect = 2e-38
Identities = 78/134 (58%), Positives = 103/134 (76%)
Frame = -1
Query: 402 NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 223
N+ AM EEM SL KN TW++V + ++ + CKW++K K+G+S +PP+YKARLVARG+
Sbjct: 831 NWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGY 890
Query: 222 TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 43
+Q+ GVDYN+ FSPVVK+ +IR L++VA + ELEQLDVK AFLHGELEE IYM QP+G
Sbjct: 891 SQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEG 950
Query: 42 FEVKGRFEKVCLLK 1
F V G+ + VC LK
Sbjct: 951 FIVPGKEKYVCKLK 964
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 165 bits (418), Expect = 2e-38
Identities = 78/134 (58%), Positives = 103/134 (76%)
Frame = -1
Query: 402 NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 223
N+ AM EEM SL KN TW++V + ++ + CKW++K K+G+S +PP+YKARLVARG+
Sbjct: 831 NWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGY 890
Query: 222 TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 43
+Q+ GVDYN+ FSPVVK+ +IR L++VA + ELEQLDVK AFLHGELEE IYM QP+G
Sbjct: 891 SQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEG 950
Query: 42 FEVKGRFEKVCLLK 1
F V G+ + VC LK
Sbjct: 951 FIVPGKEKYVCKLK 964
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 165 bits (418), Expect = 2e-38
Identities = 78/134 (58%), Positives = 103/134 (76%)
Frame = -1
Query: 402 NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 223
N+ AM EEM SL KN TW++V + ++ + CKW++K K+G+S +PP+YKARLVARG+
Sbjct: 831 NWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGY 890
Query: 222 TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 43
+Q+ GVDYN+ FSPVVK+ +IR L++VA + ELEQLDVK AFLHGELEE IYM QP+G
Sbjct: 891 SQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEG 950
Query: 42 FEVKGRFEKVCLLK 1
F V G+ + VC LK
Sbjct: 951 FIVPGKEKYVCKLK 964