BLASTX nr result
ID: Forsythia22_contig00018619
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00018619
(418 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 171 1e-40
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 168 1e-39
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 167 2e-39
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 167 2e-39
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 167 2e-39
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 165 1e-38
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 164 2e-38
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 164 3e-38
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 163 4e-38
emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera] 163 5e-38
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 162 6e-38
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] 162 8e-38
ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434... 160 2e-37
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 159 5e-37
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 159 5e-37
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 159 9e-37
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 159 9e-37
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 158 1e-36
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 158 1e-36
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 157 3e-36
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 171 bits (434), Expect = 1e-40
Identities = 78/137 (56%), Positives = 104/137 (75%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LKKSLYGLKQSPRQWYK+FDSYM+KLG++RS YD C+Y+ L +YL+ YVDD+
Sbjct: 934 VCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDM 993
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI KK +I K+K LL AEFEMKDLG A+KILGM I RDR +L ++Q +Y+ K++ +
Sbjct: 994 LIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLAR 1053
Query: 51 FGMKNAKSVNVPLAGHM 1
FGM ++K ++ P A ++
Sbjct: 1054 FGMSSSKPIDTPSAANI 1070
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 168 bits (425), Expect = 1e-39
Identities = 78/138 (56%), Positives = 103/138 (74%)
Frame = -2
Query: 417 EKVCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVD 238
+ VC LKKSLYGLKQSPRQWYK+FD++M+ F R++YD+C+YFK L G +YLL YVD
Sbjct: 1256 DHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKTLPDGSFIYLLLYVD 1315
Query: 237 DILIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKII 58
D+LI + EI+K+K LL +EFEMKDLG AKKILGM I RDR L ++Q+ Y++K++
Sbjct: 1316 DMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDRDAGLLYVSQQKYIEKLM 1375
Query: 57 TKFGMKNAKSVNVPLAGH 4
F M ++K V+ PLA H
Sbjct: 1376 QAFHMDHSKPVSTPLAQH 1393
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 167 bits (424), Expect = 2e-39
Identities = 79/136 (58%), Positives = 106/136 (77%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LK+SLYGLKQSPRQW K+FDS+M+ F RS+YD+C+Y K++ +G +YLL YVDD+
Sbjct: 960 VCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDM 1018
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI KIEI+K+K LL +EF+MKDLG+AKKILGM I RDR L ++Q NY+ K++ +
Sbjct: 1019 LIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQR 1078
Query: 51 FGMKNAKSVNVPLAGH 4
F M+NAK+V+ P+A H
Sbjct: 1079 FNMQNAKAVSTPIAPH 1094
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 167 bits (424), Expect = 2e-39
Identities = 79/136 (58%), Positives = 106/136 (77%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LK+SLYGLKQSPRQW K+FDS+M+ F RS+YD+C+Y K++ +G +YLL YVDD+
Sbjct: 960 VCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDM 1018
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI KIEI+K+K LL +EF+MKDLG+AKKILGM I RDR L ++Q NY+ K++ +
Sbjct: 1019 LIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQR 1078
Query: 51 FGMKNAKSVNVPLAGH 4
F M+NAK+V+ P+A H
Sbjct: 1079 FNMQNAKAVSTPIAPH 1094
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 167 bits (424), Expect = 2e-39
Identities = 79/136 (58%), Positives = 106/136 (77%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LK+SLYGLKQSPRQW K+FDS+M+ F RS+YD+C+Y K++ +G +YLL YVDD+
Sbjct: 962 VCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDM 1020
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI KIEI+K+K LL +EF+MKDLG+AKKILGM I RDR L ++Q NY+ K++ +
Sbjct: 1021 LIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQR 1080
Query: 51 FGMKNAKSVNVPLAGH 4
F M+NAK+V+ P+A H
Sbjct: 1081 FNMQNAKAVSTPIAPH 1096
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 165 bits (417), Expect = 1e-38
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LKKSLYGLKQSPRQWYK FD+YM+K+G++R +YD C+Y+ + G + LL YVDD+
Sbjct: 925 VCRLKKSLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVILLLLYVDDM 984
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI C ++I K+K L AEF+MKDLG A+KILG+ I+RDR+ ++ ++QE Y+ KI+ +
Sbjct: 985 LIACRDMLQIQKLKKKLGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEKYIMKILER 1044
Query: 51 FGMKNAKSVNVPLAGH 4
F M AK V++PLA H
Sbjct: 1045 FNMAEAKVVSIPLAAH 1060
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 164 bits (415), Expect = 2e-38
Identities = 78/136 (57%), Positives = 105/136 (77%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LK+SLYGLKQSPRQW K+FDS+M+ F RS+YD+C+Y K++ +G +YLL YVDD+
Sbjct: 960 VCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDM 1018
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI KIEI+K+K LL +EF+MKDLG+AKKIL M I RDR L ++Q NY+ K++ +
Sbjct: 1019 LIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQR 1078
Query: 51 FGMKNAKSVNVPLAGH 4
F M+NAK+V+ P+A H
Sbjct: 1079 FNMQNAKAVSTPIAPH 1094
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 164 bits (414), Expect = 3e-38
Identities = 75/135 (55%), Positives = 101/135 (74%)
Frame = -2
Query: 408 CLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDIL 229
C LKKSLYGLKQSPRQWYK+FDS+M++ GF RS YD C+Y ++ G +YLL YVDD+L
Sbjct: 1048 CSLKKSLYGLKQSPRQWYKRFDSFMVEHGFDRSPYDCCVYHSKVEDGSYIYLLLYVDDML 1107
Query: 228 IVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITKF 49
I KK ++ K+K LL +EF+MKDLG AKKILGM I RD +L ++Q++Y+ K++ +F
Sbjct: 1108 IAAKKKSDVLKLKKLLSSEFDMKDLGAAKKILGMEIYRDHGRKKLFLSQKSYILKVLDRF 1167
Query: 48 GMKNAKSVNVPLAGH 4
GM AKS++ P A +
Sbjct: 1168 GMSTAKSIDTPAAAN 1182
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
vulgaris]
Length = 2676
Score = 163 bits (413), Expect = 4e-38
Identities = 76/138 (55%), Positives = 101/138 (73%)
Frame = -2
Query: 417 EKVCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVD 238
E VC L KSLYGLKQSPRQWY++FDS+M+ F+RS YD+C+Y+K L G +YLL YVD
Sbjct: 809 EHVCRLVKSLYGLKQSPRQWYRRFDSFMLAHEFTRSSYDSCVYYKELVSGSFIYLLLYVD 868
Query: 237 DILIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKII 58
D+L+ C IE++ +K LL + F+MK+LG AKKILGM I RDRS L ++Q Y++K++
Sbjct: 869 DMLVACKHLIEVNNLKKLLNSGFDMKNLGEAKKILGMEIWRDRSKGVLYLSQRRYIEKVL 928
Query: 57 TKFGMKNAKSVNVPLAGH 4
+F M NAK V+ PL H
Sbjct: 929 ERFSMNNAKPVSTPLGSH 946
>emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]
Length = 367
Score = 163 bits (412), Expect = 5e-38
Identities = 76/134 (56%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Frame = -2
Query: 402 LKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCN-LYLLFYVDDILI 226
LKKSLYGLKQSPRQWYK+F+SY+I++G+ R EYD C+Y KNL + ++LL YVDD+LI
Sbjct: 36 LKKSLYGLKQSPRQWYKRFESYIIRIGYKRCEYDCCVYVKNLDDDSSFIFLLLYVDDMLI 95
Query: 225 VCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITKFG 46
V +E++K+K LL EF+MKDLG KKILGM I DR++ RL ++Q NY+ +++ +F
Sbjct: 96 VVKSMVEVNKLKSLLSKEFDMKDLGATKKILGMEIHGDRALGRLWLSQHNYVKRMLERFN 155
Query: 45 MKNAKSVNVPLAGH 4
M NAK V+ PLA H
Sbjct: 156 MDNAKPVSTPLANH 169
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 162 bits (411), Expect = 6e-38
Identities = 78/138 (56%), Positives = 100/138 (72%)
Frame = -2
Query: 417 EKVCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVD 238
+KVCLLK+SLYGL+QSPRQW +F+ +M K+G+ RS+YD+C+YFK L+ G +YLL YVD
Sbjct: 775 DKVCLLKRSLYGLRQSPRQWNNRFNEFMQKIGYERSKYDSCVYFKELQSGEYIYLLLYVD 834
Query: 237 DILIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKII 58
DILI K + +K LL +EFEMKDLG AKKILGM I RDR ++I+QE YL K++
Sbjct: 835 DILIASRDKRTVCDLKALLNSEFEMKDLGDAKKILGMEIVRDRKAGTMSISQEGYLLKVL 894
Query: 57 TKFGMKNAKSVNVPLAGH 4
FGM AK V P+ H
Sbjct: 895 GNFGMDQAKPVFTPMGAH 912
>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
Length = 406
Score = 162 bits (410), Expect = 8e-38
Identities = 76/134 (56%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = -2
Query: 402 LKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCN-LYLLFYVDDILI 226
LKKSLYGLKQSPRQWYK+FDSYMIK + R EYD C+Y K+L + ++LL YVDD+LI
Sbjct: 36 LKKSLYGLKQSPRQWYKRFDSYMIKTSYKRCEYDCCVYVKSLDDDSSFIFLLLYVDDMLI 95
Query: 225 VCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITKFG 46
V +E++K+K LL EF+MKDLG KKI+G+ I RDR++ RL ++Q NY+ +++ +F
Sbjct: 96 VVKSMVEVNKLKSLLSKEFDMKDLGVTKKIIGIEIHRDRALGRLWLSQHNYVKRMLERFN 155
Query: 45 MKNAKSVNVPLAGH 4
M NAK V+ PLA H
Sbjct: 156 MDNAKPVSTPLANH 169
>ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434364 [Malus domestica]
Length = 1100
Score = 160 bits (406), Expect = 2e-37
Identities = 76/137 (55%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC L+KSLYGLKQSPRQWYK+FD +MI ++RS YD C+YF+ L+ +YLL YVDD+
Sbjct: 94 VCKLEKSLYGLKQSPRQWYKRFDEFMIGQKYTRSHYDHCVYFRKLQDETFIYLLLYVDDM 153
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI C K+EI ++K L EFEMKDLG A+KILGM I+RDR+ ++++ Q+ YL K++ +
Sbjct: 154 LITCKSKVEIERLKTQLSNEFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQR 213
Query: 51 FGM-KNAKSVNVPLAGH 4
F M +N+K V+ PLA H
Sbjct: 214 FRMNENSKLVSTPLASH 230
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 159 bits (403), Expect = 5e-37
Identities = 78/136 (57%), Positives = 99/136 (72%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LKKSLYGLKQSPRQWYK+FDS+M+ F RS YD C+Y K + G +YLL YVDD+
Sbjct: 701 VCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYLK-VVDGSAIYLLLYVDDM 759
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI K EI K+K L +EFEMKDLG AKKILGM I R+R +L ++Q+ Y++K++ +
Sbjct: 760 LIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRR 819
Query: 51 FGMKNAKSVNVPLAGH 4
F M +AK V+ PLA H
Sbjct: 820 FNMHDAKPVSTPLAAH 835
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 159 bits (403), Expect = 5e-37
Identities = 77/137 (56%), Positives = 97/137 (70%)
Frame = -2
Query: 414 KVCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDD 235
KVCLLK+SLYGLKQSPRQW +FD +M + ++RS YD+C+YFK +YLL YVDD
Sbjct: 958 KVCLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDD 1017
Query: 234 ILIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIIT 55
+LI K E++++K LL EFEMKDLG AKKILGM I RDR LT++QE Y+ K++
Sbjct: 1018 MLIASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLR 1077
Query: 54 KFGMKNAKSVNVPLAGH 4
F M NAK V+ PL H
Sbjct: 1078 SFQMDNAKPVSTPLGIH 1094
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 159 bits (401), Expect = 9e-37
Identities = 73/136 (53%), Positives = 99/136 (72%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LKKSLYGLKQ+PRQWYK+F S+MI + +S+YD C+YF+N ++G +YLL YVDD+
Sbjct: 308 VCRLKKSLYGLKQAPRQWYKRFHSFMIGQNYCKSQYDDCIYFQNFQNGSFIYLLLYVDDM 367
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI K I K+K L EF+MK+LG AKKILGM I+RDR +L ++Q+ Y+ +++ +
Sbjct: 368 LIASRDKSLIKKLKTELSNEFDMKELGAAKKILGMEIRRDRQAGKLFLSQQKYIKRVLDR 427
Query: 51 FGMKNAKSVNVPLAGH 4
F M N K V+ PLA H
Sbjct: 428 FNMNNCKPVSTPLAAH 443
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 159 bits (401), Expect = 9e-37
Identities = 78/136 (57%), Positives = 100/136 (73%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LKKSLYGLKQSPRQWYK+FDS+M+ F RS YD+C+Y K + G +YLL YVDD+
Sbjct: 1166 VCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLK-VVDGSAIYLLLYVDDM 1224
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI K EI+K+K L +EFEMKDLG AKKILGM I R R +L ++Q+ Y++K++ +
Sbjct: 1225 LIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRR 1284
Query: 51 FGMKNAKSVNVPLAGH 4
F M +AK V+ PLA H
Sbjct: 1285 FNMHDAKPVSTPLAAH 1300
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 158 bits (400), Expect = 1e-36
Identities = 76/133 (57%), Positives = 96/133 (72%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VCLL KSLYGLKQSPRQWY++FD +M+ G+ RS YD+C+YF G YLL YVDD+
Sbjct: 957 VCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVYFGGSDQGGVAYLLLYVDDM 1016
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI K EI ++K+LLKAEFEMKDLG AK+ILGM I RDRS L ++Q Y+ K++ +
Sbjct: 1017 LIASKYKSEIERLKNLLKAEFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLER 1076
Query: 51 FGMKNAKSVNVPL 13
F M++ K V PL
Sbjct: 1077 FEMQDCKPVQTPL 1089
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 158 bits (400), Expect = 1e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LK+SLYGLKQSPRQWYK+FDS+M+ GF RSE+D+C+Y K + +G +YLL YVDD+
Sbjct: 949 VCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFV-NGSPIYLLLYVDDM 1007
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI K +I+ +K L +EF+MKDLG AKKILGM I RDR+ L ++Q++Y+ K++ +
Sbjct: 1008 LIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQR 1067
Query: 51 FGMKNAKSVNVPLAGH 4
F M +AK V+ P+A H
Sbjct: 1068 FNMHDAKPVSTPIAPH 1083
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 157 bits (397), Expect = 3e-36
Identities = 77/136 (56%), Positives = 99/136 (72%)
Frame = -2
Query: 411 VCLLKKSLYGLKQSPRQWYKKFDSYMIKLGFSRSEYDACLYFKNLKHGCNLYLLFYVDDI 232
VC LKKSLYGLKQSPRQWYK+FDS+M+ F S YD+C+Y K + G +YLL YVDD+
Sbjct: 931 VCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYLK-VVDGSVIYLLLYVDDM 989
Query: 231 LIVCDKKIEISKMKHLLKAEFEMKDLGTAKKILGMVIKRDRSVNRLTITQENYLDKIITK 52
LI K EI K+K L +EFEMKDLG AKKILGM I R+R +L ++Q+ Y++K++ +
Sbjct: 990 LIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRR 1049
Query: 51 FGMKNAKSVNVPLAGH 4
F M +AK V+ PLA H
Sbjct: 1050 FNMHDAKPVSTPLAAH 1065