BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00017617
         (4009 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088516.1| PREDICTED: pentatricopeptide repeat-containi...  1300   0.0  
ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containi...  1273   0.0  
emb|CDO96965.1| unnamed protein product [Coffea canephora]           1186   0.0  
ref|XP_009589920.1| PREDICTED: pentatricopeptide repeat-containi...  1179   0.0  
ref|XP_009799357.1| PREDICTED: pentatricopeptide repeat-containi...  1167   0.0  
ref|XP_009589921.1| PREDICTED: pentatricopeptide repeat-containi...  1152   0.0  
ref|XP_009799358.1| PREDICTED: pentatricopeptide repeat-containi...  1140   0.0  
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...  1125   0.0  
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi...  1115   0.0  
ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi...  1107   0.0  
ref|XP_007041957.1| Pentatricopeptide repeat-containing protein,...  1098   0.0  
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi...  1097   0.0  
ref|XP_010088683.1| hypothetical protein L484_003235 [Morus nota...  1095   0.0  
emb|CBI37948.3| unnamed protein product [Vitis vinifera]             1087   0.0  
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,...  1080   0.0  
ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu...  1080   0.0  
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi...  1077   0.0  
ref|XP_010315357.1| PREDICTED: pentatricopeptide repeat-containi...  1073   0.0  
ref|XP_010255161.1| PREDICTED: pentatricopeptide repeat-containi...  1069   0.0  
ref|XP_011037246.1| PREDICTED: pentatricopeptide repeat-containi...  1068   0.0  

>ref|XP_011088516.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Sesamum indicum]
            gi|747082397|ref|XP_011088517.1| PREDICTED:
            pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Sesamum indicum]
            gi|747082399|ref|XP_011088518.1| PREDICTED:
            pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Sesamum indicum]
          Length = 1190

 Score = 1300 bits (3364), Expect = 0.0
 Identities = 716/1198 (59%), Positives = 835/1198 (69%), Gaps = 98/1198 (8%)
 Frame = -1

Query: 3775 SLNSQSISLIACNPTLLPLSPRTVRSQSSEFLSFCHNLRPPGSLRSRRKCRSQRFKFHTH 3596
            SL  Q+ SL    P   PLS R V    SEFL   HNLR P     RR+C+  R +   +
Sbjct: 6    SLKPQAFSLTTRAPVSWPLSTRPVSLLRSEFLGCGHNLRLP-----RRRCKKLRLQSQPY 60

Query: 3595 AHKFRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQISNT 3416
             +KF F+A+LE+Q +L              VY +Y+RKQ N+KQM+  LT+A+SQ I + 
Sbjct: 61   YYKFLFKATLESQQMLVVVAAFAAVSAITVVYFTYSRKQFNVKQMSGRLTLAVSQHIRSM 120

Query: 3415 MNWVVGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIM 3236
            M+W++    S+R D+ K    D SND MKE RE +       +E++  ET     G LI 
Sbjct: 121  MSWIL--TDSNRVDLRKIEAVDGSNDFMKETRESNQADKDMEAEIKFRETDVIPRGILIA 178

Query: 3235 DTFESHSNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFVAEMSKVHLDVHGRKNV 3056
            +  +S S+MV S   + L+ +  E                  F+ E+S+     H   N 
Sbjct: 179  EASQSQSDMVASCVHDNLASQTSEILEISSMASISSKYNVPSFIKEVSE-----HENPNS 233

Query: 3055 VPAELSRPDV-------------------------------------VSAELSMPVVKTE 2987
            V +E   P++                                       +E S+PV++  
Sbjct: 234  VDSEWLVPEIQINFGAAPPSENHIQEEMAQLGSLKLDEIREHENPNSADSEWSVPVMQAN 293

Query: 2986 LSSAASQVNNLQAEVNQL-----------ERPN--------------------------- 2921
            L +  S VN++Q E  QL           E PN                           
Sbjct: 294  LGAVPSSVNHIQEETAQLGSLKLDKICEHENPNSVDSEWSVPVMQTNLGAAPSSANHIQE 353

Query: 2920 ---------FELSKESDIRSYDLILGDSVREGLYTFYEASLGNSDGLETLSSCGAFQKNR 2768
                      EL +E D+   +LI  DS RE L+T   ASL   D LE LSS    QKN 
Sbjct: 354  ETAQLGSLKLELLEEGDMNYSNLIFRDSEREELHTINLASLEKLDNLEPLSSYANLQKNG 413

Query: 2767 FSLQTKNFSIED--------------KFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDK 2630
                  N S+ +              KF  + P    ++G   QQ+DSR RKEL+  K K
Sbjct: 414  NCSSLLNDSLAEGSNLTARNVILSIGKFEEERPPEYQRKGFLCQQQDSRNRKELR-KKGK 472

Query: 2629 IIFHQDSTKYLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLL 2450
             IF  D  K L  +S  K  + N  H+ LWQLRVY+QLL+E RL+DCIE+LED+E KGLL
Sbjct: 473  NIFGPDRHKNLSSSSYPKEKNDNDKHNPLWQLRVYNQLLREGRLNDCIELLEDLEEKGLL 532

Query: 2449 DMDKVYHSRFFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQH 2270
            DMDKVYH RFF  CK+QKAVKEAFRFT+LIPNPTLSTFNMLMSVCASSQDSEGAFQVLQH
Sbjct: 533  DMDKVYHVRFFDVCKNQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQH 592

Query: 2269 VQEAGLKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQ 2090
            VQEAG +ADCKLYTTLISTCAKSGKVDTMFKVFH+MVNAG++PNVHTYGALIDGCAKAGQ
Sbjct: 593  VQEAGFRADCKLYTTLISTCAKSGKVDTMFKVFHDMVNAGVQPNVHTYGALIDGCAKAGQ 652

Query: 2089 VAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITV 1910
            VAKAFGAYGILRSK+VKPDRVVFNALITACGQSGAVDRAFDVLAEMRAE QPIDPDH+T+
Sbjct: 653  VAKAFGAYGILRSKDVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAELQPIDPDHVTI 712

Query: 1909 GALMKACASAGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQ 1730
            GALMKACASA QVDRAREVYNMIH+Y+I+GTAELYTIAVNSC+ +GDWEFAC VY+DMI+
Sbjct: 713  GALMKACASADQVDRAREVYNMIHEYDIRGTAELYTIAVNSCSHHGDWEFACSVYDDMIK 772

Query: 1729 KGVAPDEMFISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQK 1550
            KGVAPDEMFISALIDVAGHAG+VDAA E+LQ AR KGMHVG ISYSSLMGACSKA+DWQK
Sbjct: 773  KGVAPDEMFISALIDVAGHAGKVDAAFEILQEARAKGMHVGTISYSSLMGACSKARDWQK 832

Query: 1549 ALEFYEDVKSLNLKPTVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLV 1370
            A+E YE +KSLNLKPTV MMNALITALCD+D+L+KA E L EMK IGLCPNTITYSILLV
Sbjct: 833  AVELYESIKSLNLKPTVSMMNALITALCDSDQLQKAMEALSEMKGIGLCPNTITYSILLV 892

Query: 1369 ASEKKDDIEVGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQ 1190
            ASEKKDD+E GL+L+S+AKKDGV+PNLVMCRCL+AMCLRR+Q ACT GEPVL F+  ++Q
Sbjct: 893  ASEKKDDLEAGLMLISQAKKDGVNPNLVMCRCLLAMCLRRFQAACTLGEPVLSFTFGQVQ 952

Query: 1189 LDNKWTSSALMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKG 1010
            L++KWTS ALMVYRE IV+G  PT DELSQVLGCL+LPHD  +RNRL+EN   +TD SKG
Sbjct: 953  LNSKWTSLALMVYRETIVAGTAPTKDELSQVLGCLKLPHDVSVRNRLIENLGLNTDTSKG 1012

Query: 1009 SNLYSLIDGFGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVL 830
            +NL SLIDGFGEYDPRA SLLEEA+SLGVIP +S KE+ IV+DVRNFQ+HTAEVY LTVL
Sbjct: 1013 ANLLSLIDGFGEYDPRAFSLLEEAASLGVIPFVSLKESPIVVDVRNFQVHTAEVYFLTVL 1072

Query: 829  KGLKHRLAAGAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGN 650
            KGLKHRLAAGAKLPNV+ILLP+EK QIQT  GEK INIASRISQAVAALLRRLGL+YQGN
Sbjct: 1073 KGLKHRLAAGAKLPNVHILLPIEKAQIQTSAGEKMINIASRISQAVAALLRRLGLSYQGN 1132

Query: 649  ESYGKIRINGVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
            ESYGKIRINGV I+KWFQPKL SP+R    D++SS   LG GI  QQR IRT + SLE
Sbjct: 1133 ESYGKIRINGVIIRKWFQPKLGSPYREKKIDLSSSIRHLGSGISRQQRKIRTVHFSLE 1190


>ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Erythranthe guttatus]
          Length = 1102

 Score = 1273 bits (3293), Expect = 0.0
 Identities = 687/1124 (61%), Positives = 809/1124 (71%), Gaps = 23/1124 (2%)
 Frame = -1

Query: 3784 MELSLNSQSISLIACNPTLLPLSPRTVRSQSSEFLSFCHNLRPPGSLRSRRKCRSQRFKF 3605
            ME  +  Q++SL+   P + PLSP  V    SEFL   HNLR       RR+C+  R K 
Sbjct: 1    MECRVKPQTLSLLTRTP-IFPLSPCAVGILRSEFLGSGHNLR-----LQRRRCKKSRHKH 54

Query: 3604 HTHAHKFRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQI 3425
             +   KF F+ASLE+Q I               VY SY+RK  NI QM+  LT+ALS+QI
Sbjct: 55   QSDNCKFLFKASLESQPIFVIAAAVATVSAMTVVYFSYSRKLFNIAQMSGELTLALSEQI 114

Query: 3424 SNTMNWVVGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGT 3245
             +  +W++ S       VDK+   D S +   E RE       + +E++ GET    GG 
Sbjct: 115  RSMTSWILTSH-----IVDKKKSTDGSKNLTTETRENIQADKNSSAEIKIGETAVTPGGA 169

Query: 3244 LIMDTFESHSNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFVAEMSKVHLDVHGR 3065
            LI++     SN V SSG + L+F+  E               + PF  E  +VH + H  
Sbjct: 170  LIVEATRFQSNNVASSGHDSLTFQTSETLEISSAPSLFSNIGAQPFSREACEVHRNAHVH 229

Query: 3064 KNVVPAELSRPDVVSAELSMPVVKTELSSAASQVNNLQAEVNQLERPNFELSKESDIRSY 2885
             N V           +ELS  V++  L +A S  N++Q E ++L R  FE  +E  I + 
Sbjct: 230  TNSV----------DSELSTSVMQVNLGAALSSANHVQEESDKLSRLKFEYLEEDVINNL 279

Query: 2884 DLILGDSVREGLYTFYEASLGNSDGLETLSSCGAFQKNRFSLQTKNFSIE---------- 2735
            DLI  DSVR  LYT  EASL   D +E LSSC    K    +   N S+           
Sbjct: 280  DLIFRDSVRRELYTINEASLEKLDNVEPLSSCATLSKKINHISHLNKSLAKGSNLTARNV 339

Query: 2734 ------DKFARKGPLRCYKEGSFSQQ-------KDSRGRKELKTDKDKIIFHQDSTKYLL 2594
                  +KF  +  L  Y+ G F  Q       KDSR RKELK  KD  I HQ+ +K L 
Sbjct: 340  ILPTDTEKFEDE-KLLGYRSGVFLSQQQDSRNRKDSRNRKELKK-KDTNISHQNESKNLS 397

Query: 2593 PTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFH 2414
            P+SD +  H N+  +  WQLRVY QLL+E RL+DCIE+LED+E+  LLDMDKVYH+RFF 
Sbjct: 398  PSSDPEDKHNNNKQNRSWQLRVYDQLLREGRLNDCIELLEDLEQNSLLDMDKVYHARFFD 457

Query: 2413 ACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKL 2234
             CKSQKAVKEA RF RLI NPTLSTFNM MSVCASSQDSEGAFQVL+HVQE GLKADCKL
Sbjct: 458  VCKSQKAVKEASRFIRLISNPTLSTFNMFMSVCASSQDSEGAFQVLKHVQEVGLKADCKL 517

Query: 2233 YTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILR 2054
            YTTLISTCAKSGKVDTMFKVFHEMVNAG+EPN+HTYGALIDGCAKAGQVAKAFGAYGILR
Sbjct: 518  YTTLISTCAKSGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCAKAGQVAKAFGAYGILR 577

Query: 2053 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQ 1874
            SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAE QPI+PDHIT+GALMKACA A +
Sbjct: 578  SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEIQPIEPDHITIGALMKACARADE 637

Query: 1873 VDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISA 1694
            VDRAREVYNMIH++ I+GTAELYTIAVNSC+ +GDWEFAC VY+DMI+KGVAPDEMFISA
Sbjct: 638  VDRAREVYNMIHEFGIRGTAELYTIAVNSCSHHGDWEFACSVYDDMIKKGVAPDEMFISA 697

Query: 1693 LIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLN 1514
            LIDVAGHAG+VDAA E+LQ AR KGM +GIISYSSLMGACS A DW+KALE YE  K + 
Sbjct: 698  LIDVAGHAGKVDAAFEILQEARAKGMRIGIISYSSLMGACSNASDWKKALELYEVTKRMK 757

Query: 1513 LKPTVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGL 1334
            LKPTV MMNALITALCDAD+L+KA E L EMKS+GLCPNTITYSILLVA EKKDD+E GL
Sbjct: 758  LKPTVSMMNALITALCDADQLQKAMESLSEMKSVGLCPNTITYSILLVACEKKDDLEAGL 817

Query: 1333 LLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMV 1154
            +L+S+AKKD V+PNLVMCRCLI MCLRR+Q ACT GEPVL FS  ++QL++KWTS ALMV
Sbjct: 818  MLISQAKKDKVTPNLVMCRCLIGMCLRRFQAACTVGEPVLSFSSGQVQLNSKWTSLALMV 877

Query: 1153 YREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGE 974
            YRE I++GVTPT DELSQVLGCL+LPHD  ++NRL+EN   +T  SKG++LYSLIDGFGE
Sbjct: 878  YRETIMAGVTPTMDELSQVLGCLKLPHDASIKNRLIENLGVNTIASKGASLYSLIDGFGE 937

Query: 973  YDPRAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAK 794
            YDPRA SL+EEA+SLG IP++S KE+ IV+DVR+FQ HTAEVYLLTVLKGLKHRLAAG K
Sbjct: 938  YDPRAFSLVEEAASLGTIPVVSLKESPIVVDVRDFQFHTAEVYLLTVLKGLKHRLAAGVK 997

Query: 793  LPNVNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYGKIRINGVF 614
            LPNV +LLPVE TQIQT  GEK IN A R SQA+AALLRRLGL+YQGNES+GK+++NG+ 
Sbjct: 998  LPNVLVLLPVEPTQIQTSAGEKMINFADRRSQALAALLRRLGLSYQGNESFGKMKLNGLT 1057

Query: 613  IKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLS 482
            I+ W QP+L +PF G   D      RLG  +  Q++ IRTG+LS
Sbjct: 1058 IRMWLQPELGTPFGGKKIDRGPPLRRLGSDLSRQRQKIRTGHLS 1101


>emb|CDO96965.1| unnamed protein product [Coffea canephora]
          Length = 1101

 Score = 1186 bits (3069), Expect = 0.0
 Identities = 649/1092 (59%), Positives = 786/1092 (71%), Gaps = 21/1092 (1%)
 Frame = -1

Query: 3688 EFLSFCHNLRPPGSLRSRRKCRSQRFKFHTHAHKFRFRASLEAQSI-LXXXXXXXXXXXX 3512
            EFL   HNLRPPG LR RR+CR   F+FH H+  F  RASL++ S+ L            
Sbjct: 30   EFLGSGHNLRPPG-LRFRRQCRKLGFRFHFHSRNFLLRASLDSHSVVLVVAVTAVAVSAF 88

Query: 3511 XXVYLSYTRKQINIK--QMTRHLTVALSQQISNTMNWVVGSRGSHREDV--DKEAPDDES 3344
              V+ SY++++ N +  QM   LT  L Q I + M+ +     S  E +  ++  P D+ 
Sbjct: 89   ILVFHSYSKRRNNAQHNQMPGRLTHPLFQHIKSRMDSL-----SMEEFILLNRNIPIDKK 143

Query: 3343 NDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIMDTFE-SHSNMVGSSGGEVLSFKKL 3167
             D   E+   ++ +   V+EM   +    +G T+  +T E S   M  S   + L  ++ 
Sbjct: 144  VDLPIEMSNNTFHHEDVVAEMHLDDINVMNGATIATNTSELSICEMTASVVNDSLHTRES 203

Query: 3166 EDTXXXXXXXXXXXXXSLPFVAEMSKVHLDVHGRKNVVPAELSRPDVVSAELSMPVVKTE 2987
            E                LP   E++   L++   +  +          S E  + +VK  
Sbjct: 204  EGLSVSSLPL-------LPSEPEVAGPTLNIEPSEMQLERCEHESGSDSKETKLLLVKKP 256

Query: 2986 LSSAASQVNNLQAEVNQLERPNFELSKESDIRSYDLILGDSVREGLYTFYEASLGNSDGL 2807
              ++   VN +Q+ V +  R + E+  E      DL    S RE LYTFYEA +   +GL
Sbjct: 257  HIASFFPVN-VQSRVTEFGRLDHEILTEGQQIKPDL----SHREDLYTFYEAPMAKLNGL 311

Query: 2806 ETLSSCGAFQKNRFSLQTKNFSIE-DKFAR--------------KGPLRCYKEGSFSQQK 2672
              LSS  +  KN  S   K   ++ ++F R              K  +  Y  GS   ++
Sbjct: 312  GALSSGISLHKNGNSSLFKASVVDGEQFLRQQLSHRAEETEGHEKRHVSYYNNGSSHWKE 371

Query: 2671 DSRGRKELKTDKDKIIFHQDSTKYLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSD 2492
            D   RKE    KD    H++ +K L PT +LKG H +  + S      Y +LL++ RL+D
Sbjct: 372  DMGKRKESPAYKDNAKLHENRSKSLSPTHNLKGKHMHDRNRSPQLFGGYSKLLRDGRLND 431

Query: 2491 CIEMLEDMERKGLLDMDKVYHSRFFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCA 2312
            CIEMLEDME KGLLDMDKVYH+ FF ACK+QKAVKEAFRFT+LIPNPTLSTFNMLMSVCA
Sbjct: 432  CIEMLEDMESKGLLDMDKVYHAGFFKACKTQKAVKEAFRFTKLIPNPTLSTFNMLMSVCA 491

Query: 2311 SSQDSEGAFQVLQHVQEAGLKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVH 2132
             +QDSEGAF+VLQ VQEA LKADCKLYTTLISTCA++GKVDTMFKVFHEMVNAG+EPNVH
Sbjct: 492  RAQDSEGAFEVLQLVQEARLKADCKLYTTLISTCARAGKVDTMFKVFHEMVNAGVEPNVH 551

Query: 2131 TYGALIDGCAKAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM 1952
            TYGALIDGCAKAGQVAKAFGAYGI++SKNVKPDRVVFNALITACG+SGAVDRAFDVLAEM
Sbjct: 552  TYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEM 611

Query: 1951 RAEAQPIDPDHITVGALMKACASAGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNG 1772
            R+E +PIDPDHITVGAL+KAC  +GQ+DRAREVY M+ +YNIKGT E+YTIAVNS  +N 
Sbjct: 612  RSEIRPIDPDHITVGALIKACIRSGQIDRAREVYKMLDEYNIKGTPEVYTIAVNS--QNA 669

Query: 1771 DWEFACLVYNDMIQKGVAPDEMFISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYS 1592
            DWEFAC VY+DM  +GVAPDEMFISALIDVAGHAG +DAA E+L+ AR  G+  G ISYS
Sbjct: 670  DWEFACAVYSDMTIRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARANGIPSGSISYS 729

Query: 1591 SLMGACSKAKDWQKALEFYEDVKSLNLKPTVPMMNALITALCDADELEKATEVLFEMKSI 1412
            SLMGACS AKDWQKAL+ YE++K +NLKPTV MMNAL+TALC+AD+L+KATEVLFEMK  
Sbjct: 730  SLMGACSNAKDWQKALQLYEEIKDINLKPTVSMMNALVTALCEADQLQKATEVLFEMKMR 789

Query: 1411 GLCPNTITYSILLVASEKKDDIEVGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACT 1232
            GLCPNTITYSILLVASEKKDD+EVGL+L S+AKKDGV+PNLVMCRCLI MCLRR+Q+AC 
Sbjct: 790  GLCPNTITYSILLVASEKKDDLEVGLMLFSQAKKDGVAPNLVMCRCLIGMCLRRFQQACA 849

Query: 1231 SGEPVLPFSPRRLQLDNKWTSSALMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNR 1052
             GEPV       LQLD+KWTS ALMVYREA+V+GV PT DELSQVLGCL+LPHD  LRNR
Sbjct: 850  LGEPVFSLKSGYLQLDSKWTSLALMVYREAVVAGVAPTVDELSQVLGCLQLPHDVSLRNR 909

Query: 1051 LVENFEFSTDNSKGSNLYSLIDGFGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRN 872
            L+EN   STD SKGS L+SL+DGFGEYDPRA SLLEEA+SLG++P +S K + I++DVRN
Sbjct: 910  LIENLGVSTDTSKGSKLFSLVDGFGEYDPRAFSLLEEAASLGIVPAVSLKRSPIIVDVRN 969

Query: 871  FQIHTAEVYLLTVLKGLKHRLAAGAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAV 692
              IH AEVY+LTVLKGLKHRLAAG KLPN++ILLP+EKTQIQTP+GEKTI +A RISQAV
Sbjct: 970  LPIHAAEVYILTVLKGLKHRLAAGVKLPNLSILLPLEKTQIQTPSGEKTIKVAGRISQAV 1029

Query: 691  AALLRRLGLTYQGNESYGKIRINGVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQ 512
            AALLRRLGL + GNES+GK+RING  +KKWFQPKL+SPF G PTD +S Q RLG+GI++Q
Sbjct: 1030 AALLRRLGLHFVGNESHGKVRINGGAVKKWFQPKLDSPFSGKPTDRSSFQRRLGKGIMYQ 1089

Query: 511  QRNIRTGNLSLE 476
            QRNIRTG+LSL+
Sbjct: 1090 QRNIRTGDLSLD 1101


>ref|XP_009589920.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Nicotiana tomentosiformis]
          Length = 1094

 Score = 1179 bits (3049), Expect = 0.0
 Identities = 640/1107 (57%), Positives = 799/1107 (72%), Gaps = 12/1107 (1%)
 Frame = -1

Query: 3760 SISLIACNPTLLPLSPRTVRSQSSEFLSFCHNLRPPGSLRSRRKCRSQRFKFHTHAHKFR 3581
            ++SLI+C+P    L PR  +  S    S  +NLR PG LR RRKCR+  F+F  H+ +F 
Sbjct: 11   TLSLISCSPISSSLIPRRHQCLSG---SIQNNLRSPGLLRLRRKCRNIGFQFSAHSSRFV 67

Query: 3580 FRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQISNTMNWV- 3404
             RASL++QS++               +  ++++  NIK+++  LT+AL +QI + MNW  
Sbjct: 68   LRASLDSQSVVVVAAVVTISALTII-FFEFSKRNANIKEISAELTLALRRQIRHVMNWFP 126

Query: 3403 --VGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIMDT 3230
              V +  + +E+   E P       MKE+ ++S ++    +++Q G TY     T+I + 
Sbjct: 127  RHVFALINIQEEKSIETP-------MKEVSKVSNEHENGGTDVQLGGTYLMQ--TVITNK 177

Query: 3229 FESH--SNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLP--FVAEMSKVHLDVHGRK 3062
             ES   + M  SSGG +        T              +P  FVAE+   +L  H + 
Sbjct: 178  IESADANQMASSSGGSL--------TLGAPGSNTHAESDVIPSSFVAELHNNYLQEHLQG 229

Query: 3061 NVVPAELSRPDVVSAELSM---PVVKTELSSAASQVNNLQAEVNQLERPNFELSKESDIR 2891
                  L+  +V S+E S+   P +  +     ++  +    V+   +   +   E ++ 
Sbjct: 230  TKTSNRLTTEEV-SSEHSVGLFPAINIDKGIEETKKTDHALMVDGGLKIAHKHVAEDEVS 288

Query: 2890 SYDLILGDSVREGLYTFYEASLGNSDGLETLSSCGAFQK-NRFSLQTKNFSIE-DKFARK 2717
             ++LI  DS R+ LY+F+EAS  N +G + L+S  + ++ + FS  +K  SI+ + F  K
Sbjct: 289  IHNLIFRDSARKELYSFFEASTKNLNGQKALTSHASGERISVFSHTSKVSSIQAEDFKEK 348

Query: 2716 GPLRCYKEGSFSQQKDSRGRKELKTDKDKIIFHQDSTKYLLPTSDLKGNHANHMHDSLWQ 2537
             P  CYKEG F+  KD   RK   T K+K I   +      P  + KG           Q
Sbjct: 349  RPHGCYKEGPFNN-KDIGKRKHHFTKKEKSILLDNGNTKQFPIPNPKGIQVCDGPQPSDQ 407

Query: 2536 LRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFHACKSQKAVKEAFRFTRLIP 2357
             R Y   L+E RL DCIE L++MER G L+MDKVYH+ FF ACKSQKAVKEAFRFT+LI 
Sbjct: 408  FRAYRHFLREGRLMDCIERLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFRFTKLIQ 467

Query: 2356 NPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKLYTTLISTCAKSGKVDTMFK 2177
            NPTLSTFNML+SVCASS+D EGAF+VLQ V+E GLK DCKLYTTLISTCAK+GKVDTMF+
Sbjct: 468  NPTLSTFNMLLSVCASSRDLEGAFRVLQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFE 527

Query: 2176 VFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILRSKNVKPDRVVFNALITACG 1997
            VFHEMVNAG+EPNV+TYGALIDGCAKAGQVAKAFGAYGI+RSKNVKPDRVVFNALITACG
Sbjct: 528  VFHEMVNAGVEPNVNTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 587

Query: 1996 QSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQVDRAREVYNMIHKYNIKGT 1817
            QSGAVDRAFDVL+EM+AEA+PI+PD IT+GALMKACA+AGQVDRA +VY MI KY+IKGT
Sbjct: 588  QSGAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALDVYRMIDKYDIKGT 647

Query: 1816 AELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISALIDVAGHAGRVDAAVEVLQ 1637
            AE+YTIAVN C++N +W+FA  +Y+DM +KGV PDEMFISAL+DVAGHAG++DAA +VL+
Sbjct: 648  AEVYTIAVNCCSQNDNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLE 707

Query: 1636 AARTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLNLKPTVPMMNALITALCDAD 1457
             ARTKG++VG +SYSSLMGACS AK+WQKALE YED+K + LKPTV MMNAL+TALCDAD
Sbjct: 708  EARTKGINVGSMSYSSLMGACSNAKNWQKALELYEDIKGVKLKPTVSMMNALVTALCDAD 767

Query: 1456 ELEKATEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGLLLLSEAKKDGVSPNLVMCR 1277
            + +KA E+  EMK + LCPNTITYS LLVASEKKDD+++GL+LLS AKKDGVSPNLVMCR
Sbjct: 768  QYQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSPNLVMCR 827

Query: 1276 CLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMVYREAIVSGVTPTTDELSQV 1097
            CL+AMCLRR+QKACT GEPVL ++  RLQLD+KWTS ALM+YRE I +GV PT DELS V
Sbjct: 828  CLLAMCLRRFQKACTLGEPVLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTMDELSLV 887

Query: 1096 LGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGEYDPRAISLLEEASSLGVIP 917
            LGCL+LP D  L+ RL+EN   + + SKGSNL SLIDGFGEYDPRA SLLEEA+SLG IP
Sbjct: 888  LGCLQLPRDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRAFSLLEEAASLGTIP 947

Query: 916  LISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAKLPNVNILLPVEKTQIQTPT 737
            L S K N + +D RN  IHTA+VYLLTVLKGLKHRLAAGAK+PN++ILLPVE++ IQTPT
Sbjct: 948  LTSLKGNPVAVDARNLHIHTAQVYLLTVLKGLKHRLAAGAKIPNISILLPVEQSHIQTPT 1007

Query: 736  GEKTINIASRISQAVAALLRRLGLTYQGNESYGKIRINGVFIKKWFQPKLNSPFRGTPTD 557
            GEKTI IA RI++AVAALLRRLGL YQGNESYGKIRINGV +K+WFQPKL SPF    T+
Sbjct: 1008 GEKTIKIAGRINRAVAALLRRLGLPYQGNESYGKIRINGVIVKRWFQPKLESPFSWEQTN 1067

Query: 556  MNSSQARLGRGIIHQQRNIRTGNLSLE 476
            ++ SQ RL +GI HQQRNIRT NLSL+
Sbjct: 1068 LSFSQTRLRKGISHQQRNIRTSNLSLD 1094


>ref|XP_009799357.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Nicotiana sylvestris]
          Length = 1095

 Score = 1167 bits (3018), Expect = 0.0
 Identities = 638/1113 (57%), Positives = 787/1113 (70%), Gaps = 18/1113 (1%)
 Frame = -1

Query: 3760 SISLIACNPTLLPLSPRTVRSQSSEFLSFCHNLRPPGSLRSRRKCRSQRFKFHTHAHKFR 3581
            ++SLI+C+P    L PR        F S  +NLR P  LRSRRKCR+  F+F  H+  F 
Sbjct: 11   TLSLISCSPISSSLIPRR---HQCFFGSSHNNLRSPVLLRSRRKCRNIGFQFGAHSSPFV 67

Query: 3580 FRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQISNTMNWVV 3401
             RASL++QS++              ++  ++++  N+K+++  LT+AL +QI + MNW  
Sbjct: 68   LRASLDSQSVV-VVAAVVTISALTIIFFEFSKRNANLKEISAELTLALRRQIRHVMNWF- 125

Query: 3400 GSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIMDTFES 3221
                 H   +     +     SM E+ ++S +     +++Q G  Y     T+I +  ES
Sbjct: 126  ---PRHVFALINIQEEKSVETSMTEVSKVSNELEDAGTDVQLGGAYLMQ--TVITNKIES 180

Query: 3220 --HSNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFVAEMSKVHLDVH--GRKNVV 3053
               + M  SSGG +       +T                FVAE    +L  H  G K   
Sbjct: 181  ADANQMASSSGGSLTLGAPGSNTHAESDVVPSS-----SFVAESLNNYLQEHLQGTK--- 232

Query: 3052 PAELSRPDVVSAELSMPVVKTELSSAASQVNNLQAEVNQLERPNFELS------------ 2909
                      S  L+   V +E S       N+   + + ++ +  L             
Sbjct: 233  ---------TSNRLTTEEVSSEHSVGLFPAINIDKGIEETKKTDHALMADGGLKIAHKHV 283

Query: 2908 KESDIRSYDLILGDSVREGLYTFYEASLGNSDGLETLSSCGAFQK-NRFSLQTKNFSIE- 2735
             E ++  ++LI  DS R+ LY+F+EAS  + +G + L+S  + ++ + FS  +K  SI+ 
Sbjct: 284  AEDEVSIHNLIFRDSARKELYSFFEASTKSLNGQKALTSHASGERISVFSHTSKVSSIQA 343

Query: 2734 DKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKIIFHQDSTKYLLPTSDLKGNHANHM 2555
            + F  K P  CYKEG F+  KD   RK   T K+K I   + T       + KG      
Sbjct: 344  EDFKEKSPHGCYKEGPFN-NKDFGKRKNHFTKKEKSILLDNGTTKQFQIPNPKGIQVCDG 402

Query: 2554 HDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFHACKSQKAVKEAFR 2375
                 Q R Y + L+E RL DCIEML++MER G L+MDKVYH+ FF ACKSQKAVKEAFR
Sbjct: 403  PQPSDQFRAYRRFLREGRLMDCIEMLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFR 462

Query: 2374 FTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKLYTTLISTCAKSGK 2195
            FT+LI NPTLSTFNML+SVCA+S+D EGAF+V+Q V+E GLK DCKLYTTLISTCAKSGK
Sbjct: 463  FTKLIQNPTLSTFNMLLSVCATSRDLEGAFRVVQLVRETGLKPDCKLYTTLISTCAKSGK 522

Query: 2194 VDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILRSKNVKPDRVVFNA 2015
            VDTMF+VFHEMVNAG+EPNV+TYGALIDGCAKAGQVAKAFGAYGI+RSKNVKPDRVVFNA
Sbjct: 523  VDTMFEVFHEMVNAGVEPNVNTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 582

Query: 2014 LITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQVDRAREVYNMIHK 1835
            LITACGQSGAVDRAFDVL+EM+AEA+PI+PD ITVGALMKACA+AGQVDRA +VY MI K
Sbjct: 583  LITACGQSGAVDRAFDVLSEMKAEARPIEPDQITVGALMKACANAGQVDRALDVYRMIDK 642

Query: 1834 YNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISALIDVAGHAGRVDA 1655
            Y+IKGTAE+YTIAVN C++NG+W+FA  +Y+DM +KGV PDEMFISAL+DVAGHAG++DA
Sbjct: 643  YDIKGTAEVYTIAVNCCSQNGNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDA 702

Query: 1654 AVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLNLKPTVPMMNALIT 1475
            A +VL+ ARTKG++VG +SYSSLMGACS AK+WQKALE YEDVK + LKPTV MMNAL+T
Sbjct: 703  AFDVLEEARTKGINVGSMSYSSLMGACSNAKNWQKALELYEDVKGVKLKPTVSMMNALVT 762

Query: 1474 ALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGLLLLSEAKKDGVSP 1295
            ALCDAD+ +KA E+  EMK + LCPNTITYS LLVASEKKDD+++GL+LLS AKKDGVSP
Sbjct: 763  ALCDADQYQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSP 822

Query: 1294 NLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMVYREAIVSGVTPTT 1115
            NLVMCRCL+AMCLRR+QKACT GEPVL ++  RLQLD+KWTS ALM+YRE I +GV PT 
Sbjct: 823  NLVMCRCLLAMCLRRFQKACTLGEPVLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTM 882

Query: 1114 DELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGEYDPRAISLLEEAS 935
            DELS VLGCL+LP D  L+ RL+EN   + + SKGSNL SLIDGFGEYD RA SLLEEA+
Sbjct: 883  DELSLVLGCLQLPRDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDSRAFSLLEEAA 942

Query: 934  SLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAKLPNVNILLPVEKT 755
            SLG IPL S K N + +D RN  IHTA+VYLLTVLKGLKHRLAAGAK+PN++ILLPVE++
Sbjct: 943  SLGTIPLTSLKGNPVAVDARNLHIHTAQVYLLTVLKGLKHRLAAGAKIPNISILLPVEQS 1002

Query: 754  QIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYGKIRINGVFIKKWFQPKLNSPF 575
             IQTPTGEKTI IA RI++AVAALLRRLGL YQGNESYGKIRINGV +KKWFQPKL SPF
Sbjct: 1003 HIQTPTGEKTIKIAGRINRAVAALLRRLGLPYQGNESYGKIRINGVIVKKWFQPKLESPF 1062

Query: 574  RGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
                TD++ S  RL +GI HQQRNIR GNLSL+
Sbjct: 1063 SWEQTDLSFSPTRLRKGISHQQRNIRAGNLSLD 1095


>ref|XP_009589921.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Nicotiana tomentosiformis]
          Length = 1063

 Score = 1152 bits (2980), Expect = 0.0
 Identities = 630/1104 (57%), Positives = 781/1104 (70%), Gaps = 9/1104 (0%)
 Frame = -1

Query: 3760 SISLIACNPTLLPLSPRTVRSQSSEFLSFCHNLRPPGSLRSRRKCRSQRFKFHTHAHKFR 3581
            ++SLI+C+P    L PR  +  S    S  +NLR PG LR RRKCR+  F+F  H+ +F 
Sbjct: 11   TLSLISCSPISSSLIPRRHQCLSG---SIQNNLRSPGLLRLRRKCRNIGFQFSAHSSRFV 67

Query: 3580 FRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQISNTMNWVV 3401
             RASL++QS++               +  ++++  NIK+                     
Sbjct: 68   LRASLDSQSVVVVAAVVTISALTII-FFEFSKRNANIKE--------------------- 105

Query: 3400 GSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIMDTFES 3221
                   E+   E P       MKE+ ++S ++    +++Q G TY     T+I +  ES
Sbjct: 106  -------EEKSIETP-------MKEVSKVSNEHENGGTDVQLGGTYLMQ--TVITNKIES 149

Query: 3220 H--SNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLP--FVAEMSKVHLDVHGRKNVV 3053
               + M  SSGG +        T              +P  FVAE+   +L  H +    
Sbjct: 150  ADANQMASSSGGSL--------TLGAPGSNTHAESDVIPSSFVAELHNNYLQEHLQGTKT 201

Query: 3052 PAELSRPDVVSAELSM---PVVKTELSSAASQVNNLQAEVNQLERPNFELSKESDIRSYD 2882
               L+  +V S+E S+   P +  +     ++  +    V+   +   +   E ++  ++
Sbjct: 202  SNRLTTEEV-SSEHSVGLFPAINIDKGIEETKKTDHALMVDGGLKIAHKHVAEDEVSIHN 260

Query: 2881 LILGDSVREGLYTFYEASLGNSDGLETLSSCGAFQK-NRFSLQTKNFSIE-DKFARKGPL 2708
            LI  DS R+ LY+F+EAS  N +G + L+S  + ++ + FS  +K  SI+ + F  K P 
Sbjct: 261  LIFRDSARKELYSFFEASTKNLNGQKALTSHASGERISVFSHTSKVSSIQAEDFKEKRPH 320

Query: 2707 RCYKEGSFSQQKDSRGRKELKTDKDKIIFHQDSTKYLLPTSDLKGNHANHMHDSLWQLRV 2528
             CYKEG F+  KD   RK   T K+K I   +      P  + KG           Q R 
Sbjct: 321  GCYKEGPFNN-KDIGKRKHHFTKKEKSILLDNGNTKQFPIPNPKGIQVCDGPQPSDQFRA 379

Query: 2527 YHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFHACKSQKAVKEAFRFTRLIPNPT 2348
            Y   L+E RL DCIE L++MER G L+MDKVYH+ FF ACKSQKAVKEAFRFT+LI NPT
Sbjct: 380  YRHFLREGRLMDCIERLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFRFTKLIQNPT 439

Query: 2347 LSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKLYTTLISTCAKSGKVDTMFKVFH 2168
            LSTFNML+SVCASS+D EGAF+VLQ V+E GLK DCKLYTTLISTCAK+GKVDTMF+VFH
Sbjct: 440  LSTFNMLLSVCASSRDLEGAFRVLQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFH 499

Query: 2167 EMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSG 1988
            EMVNAG+EPNV+TYGALIDGCAKAGQVAKAFGAYGI+RSKNVKPDRVVFNALITACGQSG
Sbjct: 500  EMVNAGVEPNVNTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 559

Query: 1987 AVDRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQVDRAREVYNMIHKYNIKGTAEL 1808
            AVDRAFDVL+EM+AEA+PI+PD IT+GALMKACA+AGQVDRA +VY MI KY+IKGTAE+
Sbjct: 560  AVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALDVYRMIDKYDIKGTAEV 619

Query: 1807 YTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISALIDVAGHAGRVDAAVEVLQAAR 1628
            YTIAVN C++N +W+FA  +Y+DM +KGV PDEMFISAL+DVAGHAG++DAA +VL+ AR
Sbjct: 620  YTIAVNCCSQNDNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLEEAR 679

Query: 1627 TKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLNLKPTVPMMNALITALCDADELE 1448
            TKG++VG +SYSSLMGACS AK+WQKALE YED+K + LKPTV MMNAL+TALCDAD+ +
Sbjct: 680  TKGINVGSMSYSSLMGACSNAKNWQKALELYEDIKGVKLKPTVSMMNALVTALCDADQYQ 739

Query: 1447 KATEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGLLLLSEAKKDGVSPNLVMCRCLI 1268
            KA E+  EMK + LCPNTITYS LLVASEKKDD+++GL+LLS AKKDGVSPNLVMCRCL+
Sbjct: 740  KALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSPNLVMCRCLL 799

Query: 1267 AMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMVYREAIVSGVTPTTDELSQVLGC 1088
            AMCLRR+QKACT GEPVL ++  RLQLD+KWTS ALM+YRE I +GV PT DELS VLGC
Sbjct: 800  AMCLRRFQKACTLGEPVLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTMDELSLVLGC 859

Query: 1087 LRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGEYDPRAISLLEEASSLGVIPLIS 908
            L+LP D  L+ RL+EN   + + SKGSNL SLIDGFGEYDPRA SLLEEA+SLG IPL S
Sbjct: 860  LQLPRDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRAFSLLEEAASLGTIPLTS 919

Query: 907  FKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAKLPNVNILLPVEKTQIQTPTGEK 728
             K N + +D RN  IHTA+VYLLTVLKGLKHRLAAGAK+PN++ILLPVE++ IQTPTGEK
Sbjct: 920  LKGNPVAVDARNLHIHTAQVYLLTVLKGLKHRLAAGAKIPNISILLPVEQSHIQTPTGEK 979

Query: 727  TINIASRISQAVAALLRRLGLTYQGNESYGKIRINGVFIKKWFQPKLNSPFRGTPTDMNS 548
            TI IA RI++AVAALLRRLGL YQGNESYGKIRINGV +K+WFQPKL SPF    T+++ 
Sbjct: 980  TIKIAGRINRAVAALLRRLGLPYQGNESYGKIRINGVIVKRWFQPKLESPFSWEQTNLSF 1039

Query: 547  SQARLGRGIIHQQRNIRTGNLSLE 476
            SQ RL +GI HQQRNIRT NLSL+
Sbjct: 1040 SQTRLRKGISHQQRNIRTSNLSLD 1063


>ref|XP_009799358.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Nicotiana sylvestris]
          Length = 1064

 Score = 1140 bits (2948), Expect = 0.0
 Identities = 628/1113 (56%), Positives = 771/1113 (69%), Gaps = 18/1113 (1%)
 Frame = -1

Query: 3760 SISLIACNPTLLPLSPRTVRSQSSEFLSFCHNLRPPGSLRSRRKCRSQRFKFHTHAHKFR 3581
            ++SLI+C+P    L PR        F S  +NLR P  LRSRRKCR+  F+F  H+  F 
Sbjct: 11   TLSLISCSPISSSLIPRR---HQCFFGSSHNNLRSPVLLRSRRKCRNIGFQFGAHSSPFV 67

Query: 3580 FRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQISNTMNWVV 3401
             RASL++QS++               +  ++++  N+K+  + +                
Sbjct: 68   LRASLDSQSVVVVAAVVTISALTII-FFEFSKRNANLKEEEKSVET-------------- 112

Query: 3400 GSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIMDTFES 3221
                                 SM E+ ++S +     +++Q G  Y     T+I +  ES
Sbjct: 113  ---------------------SMTEVSKVSNELEDAGTDVQLGGAYLMQ--TVITNKIES 149

Query: 3220 H--SNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFVAEMSKVHLDVH--GRKNVV 3053
               + M  SSGG +       +T                FVAE    +L  H  G K   
Sbjct: 150  ADANQMASSSGGSLTLGAPGSNTHAESDVVPSSS-----FVAESLNNYLQEHLQGTKT-- 202

Query: 3052 PAELSRPDVVSAELSMPVVKTELSSAASQVNNLQAEVNQLERPNFELSK----------- 2906
                      S  L+   V +E S       N+   + + ++ +  L             
Sbjct: 203  ----------SNRLTTEEVSSEHSVGLFPAINIDKGIEETKKTDHALMADGGLKIAHKHV 252

Query: 2905 -ESDIRSYDLILGDSVREGLYTFYEASLGNSDGLETLSSCGAFQK-NRFSLQTKNFSIE- 2735
             E ++  ++LI  DS R+ LY+F+EAS  + +G + L+S  + ++ + FS  +K  SI+ 
Sbjct: 253  AEDEVSIHNLIFRDSARKELYSFFEASTKSLNGQKALTSHASGERISVFSHTSKVSSIQA 312

Query: 2734 DKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKIIFHQDSTKYLLPTSDLKGNHANHM 2555
            + F  K P  CYKEG F+  KD   RK   T K+K I   + T       + KG      
Sbjct: 313  EDFKEKSPHGCYKEGPFNN-KDFGKRKNHFTKKEKSILLDNGTTKQFQIPNPKGIQVCDG 371

Query: 2554 HDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFHACKSQKAVKEAFR 2375
                 Q R Y + L+E RL DCIEML++MER G L+MDKVYH+ FF ACKSQKAVKEAFR
Sbjct: 372  PQPSDQFRAYRRFLREGRLMDCIEMLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFR 431

Query: 2374 FTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKLYTTLISTCAKSGK 2195
            FT+LI NPTLSTFNML+SVCA+S+D EGAF+V+Q V+E GLK DCKLYTTLISTCAKSGK
Sbjct: 432  FTKLIQNPTLSTFNMLLSVCATSRDLEGAFRVVQLVRETGLKPDCKLYTTLISTCAKSGK 491

Query: 2194 VDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILRSKNVKPDRVVFNA 2015
            VDTMF+VFHEMVNAG+EPNV+TYGALIDGCAKAGQVAKAFGAYGI+RSKNVKPDRVVFNA
Sbjct: 492  VDTMFEVFHEMVNAGVEPNVNTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 551

Query: 2014 LITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQVDRAREVYNMIHK 1835
            LITACGQSGAVDRAFDVL+EM+AEA+PI+PD ITVGALMKACA+AGQVDRA +VY MI K
Sbjct: 552  LITACGQSGAVDRAFDVLSEMKAEARPIEPDQITVGALMKACANAGQVDRALDVYRMIDK 611

Query: 1834 YNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISALIDVAGHAGRVDA 1655
            Y+IKGTAE+YTIAVN C++NG+W+FA  +Y+DM +KGV PDEMFISAL+DVAGHAG++DA
Sbjct: 612  YDIKGTAEVYTIAVNCCSQNGNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDA 671

Query: 1654 AVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLNLKPTVPMMNALIT 1475
            A +VL+ ARTKG++VG +SYSSLMGACS AK+WQKALE YEDVK + LKPTV MMNAL+T
Sbjct: 672  AFDVLEEARTKGINVGSMSYSSLMGACSNAKNWQKALELYEDVKGVKLKPTVSMMNALVT 731

Query: 1474 ALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGLLLLSEAKKDGVSP 1295
            ALCDAD+ +KA E+  EMK + LCPNTITYS LLVASEKKDD+++GL+LLS AKKDGVSP
Sbjct: 732  ALCDADQYQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSP 791

Query: 1294 NLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMVYREAIVSGVTPTT 1115
            NLVMCRCL+AMCLRR+QKACT GEPVL ++  RLQLD+KWTS ALM+YRE I +GV PT 
Sbjct: 792  NLVMCRCLLAMCLRRFQKACTLGEPVLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTM 851

Query: 1114 DELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGEYDPRAISLLEEAS 935
            DELS VLGCL+LP D  L+ RL+EN   + + SKGSNL SLIDGFGEYD RA SLLEEA+
Sbjct: 852  DELSLVLGCLQLPRDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDSRAFSLLEEAA 911

Query: 934  SLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAKLPNVNILLPVEKT 755
            SLG IPL S K N + +D RN  IHTA+VYLLTVLKGLKHRLAAGAK+PN++ILLPVE++
Sbjct: 912  SLGTIPLTSLKGNPVAVDARNLHIHTAQVYLLTVLKGLKHRLAAGAKIPNISILLPVEQS 971

Query: 754  QIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYGKIRINGVFIKKWFQPKLNSPF 575
             IQTPTGEKTI IA RI++AVAALLRRLGL YQGNESYGKIRINGV +KKWFQPKL SPF
Sbjct: 972  HIQTPTGEKTIKIAGRINRAVAALLRRLGLPYQGNESYGKIRINGVIVKKWFQPKLESPF 1031

Query: 574  RGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
                TD++ S  RL +GI HQQRNIR GNLSL+
Sbjct: 1032 SWEQTDLSFSPTRLRKGISHQQRNIRAGNLSLD 1064


>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Vitis vinifera]
          Length = 1115

 Score = 1125 bits (2909), Expect = 0.0
 Identities = 629/1129 (55%), Positives = 779/1129 (68%), Gaps = 26/1129 (2%)
 Frame = -1

Query: 3784 MELSLNSQSISLIACNPTLLPLSPRTVRSQ-SSEFLSFCHNLRPPGSLRSRRKCRSQRFK 3608
            +  S  SQ+++LI+C P     SP +  S    EFL   HNLRPPG LRS +KC++ RF+
Sbjct: 3    VNFSAKSQALTLISCTPLYSSPSPSSSFSTLRREFLGCGHNLRPPG-LRSPKKCKNIRFR 61

Query: 3607 FHTHAHKFRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQ 3428
              + + +F F+ASL +Q +L               +LSY+R++ N ++++     A+SQ 
Sbjct: 62   IQSPS-RFYFKASLGSQPVLVVVAVAAVFAFSVV-FLSYSRRRKNSREVSGPSGFAISQL 119

Query: 3427 ISNTMNWVVGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGG 3248
              + MN  + S      D+ KE  + ES  +M  + E+S+      +  Q  E       
Sbjct: 120  SRDVMNQFMESAILGFGDLHKETSEKESRATMDIVEEVSHASKDKEAPWQ--EIALMQEE 177

Query: 3247 TLIMDTFESHS-NMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLP---FVAEMSKVHL 3080
            T + +T ES   +++ S+    +S ++ E+               L    F  EM ++ L
Sbjct: 178  THVTNTSESSRLDVLSSNAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQL 237

Query: 3079 DVHGRKNVVPAELSRPDVVSAELSMPVVKTELSSAASQVNNLQAE-VNQLERPNFELSKE 2903
            +          E         +LS PVV+T+ S AAS  + +  E VN+ +       +E
Sbjct: 238  E----------ERQMETEFGYDLSTPVVQTK-SIAASVPDIIALEGVNERKNRGGRPGEE 286

Query: 2902 SDIRSYDLILGDSVREGLYTFYEAS------LGNSDGLETLSS-CGAFQKNRFSLQTKN- 2747
            S+I S+  I  D++RE LYTFYEA       + N +G++TL+S       N  S Q +N 
Sbjct: 287  SEIISFTGIFRDTIREELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNA 346

Query: 2746 ------------FSIEDKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKIIFHQDSTK 2603
                         S  D    K  L CYKEGS  ++ D    K    DK+  +      +
Sbjct: 347  TSKEAELSAQNSHSSADYVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHR 406

Query: 2602 YLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSR 2423
             L       G      +    +   Y++LL E RLSDCI++LEDME+ GLLDMDKVYH++
Sbjct: 407  NLSQFPLSNGMTVKEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAK 466

Query: 2422 FFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKAD 2243
            FF  C+SQKAV EAFRF +LIP PTLSTFNMLMSVCA+SQDS GAFQVLQ V+EAGLKAD
Sbjct: 467  FFKICRSQKAVTEAFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKAD 526

Query: 2242 CKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYG 2063
            CKLYTTLISTCAKSGKVD MF+VFHEMVNA +EPNVHTYGALIDGC +AGQVAKAFGAYG
Sbjct: 527  CKLYTTLISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYG 586

Query: 2062 ILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACAS 1883
            I+RSK V+PDRVVFNALITACGQSGAVDRAFDVLAEMRAE QPIDPDHITVGAL+KAC +
Sbjct: 587  IMRSKKVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTN 646

Query: 1882 AGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMF 1703
            AGQVDRAREVY MI +YNIKGT E+YTIAV+S ++ GDWEFA  VY DM +KGV PDEMF
Sbjct: 647  AGQVDRAREVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMF 706

Query: 1702 ISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVK 1523
            +SALIDVAGHAG++DAA EV+Q AR +G+ +GI+SYSSLMGACS AK+WQKALE Y D+K
Sbjct: 707  LSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIK 766

Query: 1522 SLNLKPTVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEKKDDIE 1343
            S+ L PTV  MNALITALC+ ++LEKA EVL +MK  GLCPNTITYSILLVASEKKDDI+
Sbjct: 767  SMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDID 826

Query: 1342 VGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSA 1163
            VGL++LS+A+KD V+PNLVMCRCL+ MCLRR++KAC  GEPVL F+  R Q+DNKWTSSA
Sbjct: 827  VGLMILSQARKDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSA 886

Query: 1162 LMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDG 983
            LMVYRE + +GV PT + LSQVLGCL+ P D  LRNRL+EN   S D S+ SNL SLIDG
Sbjct: 887  LMVYRETVSAGVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDG 946

Query: 982  FGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAA 803
            FGEYD RA SLLEEA+SLGV+  +SFK++ +++D R  QI  AEVYLLTVLKGLKHRLAA
Sbjct: 947  FGEYDSRAFSLLEEAASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAA 1006

Query: 802  GAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYGKIRIN 623
            GAKLP++ ILLP E TQ+  P GEK IN+A RISQAVA++LRRLGL YQGNES GKIRIN
Sbjct: 1007 GAKLPSMTILLPTETTQVLAPKGEKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRIN 1066

Query: 622  GVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
            G+  ++WFQPKL  PF G   +++SSQ+RLG GI  QQR IRTGNLSL+
Sbjct: 1067 GLATRRWFQPKLAGPFSGKVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1115


>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1140

 Score = 1115 bits (2884), Expect = 0.0
 Identities = 625/1151 (54%), Positives = 783/1151 (68%), Gaps = 56/1151 (4%)
 Frame = -1

Query: 3760 SISLIACNPTLLPLSPRTVRSQSSEFLS-FCHNLRPPGSLRSRRKCRSQRFKFHTHAHKF 3584
            ++SL++C+P    L PR       +FLS   H+LRPPG L SRR+CR+  F+F ++  +F
Sbjct: 11   TLSLLSCSPISSSLVPRR------QFLSGSTHSLRPPG-LHSRRRCRNIGFQFGSNTSRF 63

Query: 3583 RFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQIN----IKQMTRHLTVALSQQISNT 3416
              RASL++Q+++               +L ++++  N     K+++  LT+AL +QI + 
Sbjct: 64   VLRASLDSQTVVFASVVTISALTVV--FLEFSKRNTNANAKFKEISAELTLALRRQIRHV 121

Query: 3415 MNWVVGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIM 3236
            MN        H   +     +      MKE+ ++S ++         G       GT ++
Sbjct: 122  MNGFP----RHVLALINIQEEKSVKIQMKEVTKVSNEHE------DGGTDVLQHDGTDLI 171

Query: 3235 DTFESHSNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLP--FVAEMSKVHLD----- 3077
             TF ++ N+      ++        T             ++P  FVAE++ ++L      
Sbjct: 172  QTFVTN-NIESVDTNQLAPSSNGSLTLGASVPNAHTESDAVPSSFVAELNNIYLQENLRM 230

Query: 3076 ------------------------------VHGRKNVVPAELSRPDVVSAELSMPVVKTE 2987
                                          V   KN+   E      +S  L+   V +E
Sbjct: 231  TKMSNILTTEEVREPEPIAHTESDAVPSSFVEESKNICLQEHLHETKMSNILTTEEVSSE 290

Query: 2986 LSSAASQVNNLQAEVNQLERPNFELSK------------ESDIRSYDLILGDSVREGLYT 2843
             S A     N+     + ++ + EL              E ++  ++LI  DS RE LY+
Sbjct: 291  RSVALFPAINIDNRPEKTKKMDQELMTKDGCKKAHKFVAEDEVTIHNLIFRDSTREDLYS 350

Query: 2842 FYEASLGNSDGLETLSSCGAFQK-NRFSLQTKNFSIE-DKFARKGPLRCYKEGSFSQQKD 2669
            F+EAS  + +G + L+S  + Q    FS  +K FS+  + F  K    CYKEG F++ KD
Sbjct: 351  FFEASSKSLNGQDALTSHASLQGIGAFSPASKVFSVRAEDFEEKRSHGCYKEGPFNK-KD 409

Query: 2668 SRGRKELKTDKDKIIFHQDSTKYLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDC 2489
               R +  T+K+K I   +     L   + KG       +   Q R Y   L+E RL DC
Sbjct: 410  FLKRMQHFTNKEKSILPDNGASKQLQIPNPKGIQVCDRPNPSDQFRDYRHFLREGRLMDC 469

Query: 2488 IEMLEDMERKGLLDMDKVYHSRFFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCAS 2309
            IE+LEDM R G L+MDKVYH+ FF  CKSQKAVKEAFRFT+LI NPTLSTFNML++VCAS
Sbjct: 470  IEILEDMGRHGSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIRNPTLSTFNMLLTVCAS 529

Query: 2308 SQDSEGAFQVLQHVQEAGLKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHT 2129
            S+D E AFQV Q V+E GLK DCKLYTTLISTCAK+GKVDTMF+VFHEMVNAG+EPN +T
Sbjct: 530  SRDLERAFQVFQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANT 589

Query: 2128 YGALIDGCAKAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMR 1949
            YG LIDGCAKAGQVAKAFGAYGI+RSKNVKPDRVVFNALITACGQSGAVDRAFDVL+EM+
Sbjct: 590  YGTLIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMK 649

Query: 1948 AEAQPIDPDHITVGALMKACASAGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGD 1769
            AEA+PI+PD IT+GALMKACA+AGQVDRA EVY MI K +IKGT E+YTIAVN C++NG+
Sbjct: 650  AEARPIEPDQITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGN 709

Query: 1768 WEFACLVYNDMIQKGVAPDEMFISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSS 1589
            WEFA  +Y+DM +KGV PDEMFISALIDVAGH G+++AA EVL+ ARTKG+++G ISYSS
Sbjct: 710  WEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARTKGINLGSISYSS 769

Query: 1588 LMGACSKAKDWQKALEFYEDVKSLNLKPTVPMMNALITALCDADELEKATEVLFEMKSIG 1409
            LMGAC  A++WQKALE YED+K +NLKPTV MMNALITALC AD+ +KA E+  EMK + 
Sbjct: 770  LMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKKVD 829

Query: 1408 LCPNTITYSILLVASEKKDDIEVGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTS 1229
            LCPNTITYS LLVASEKKDD++VGL+LLS AKKDGV+PNLVMCRCL+AMC RR+QKACT 
Sbjct: 830  LCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCLLAMCSRRFQKACTL 889

Query: 1228 GEPVLPFSPRRLQLDNKWTSSALMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRL 1049
            GEPVL  +  RLQLD+KWTS ALMVYRE I +GV PT +ELS VLGCL+LP D  L+ RL
Sbjct: 890  GEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLGCLQLPCDASLKERL 949

Query: 1048 VENFEFSTDNSKGSNLYSLIDGFGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRNF 869
            +EN   + + SKGSNL SLIDGFGEYDPRA SLLEEA+SLG++PL SFK + IV+DVRN 
Sbjct: 950  IENLGLTVETSKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLTSFKGSPIVVDVRNL 1009

Query: 868  QIHTAEVYLLTVLKGLKHRLAAGAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAVA 689
             IH A+VYLLTVLK LKHRLAAGAK+PN++ILLPVE++ IQTPTGEKTI IA RI++AVA
Sbjct: 1010 HIHAAQVYLLTVLKSLKHRLAAGAKIPNISILLPVEQSHIQTPTGEKTIKIAGRINRAVA 1069

Query: 688  ALLRRLGLTYQGNESYGKIRINGVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQ 509
            ALLRRLGL YQGNES+GKIRINGV +K+WFQPKL SPF    TD + SQ RL +GI HQQ
Sbjct: 1070 ALLRRLGLPYQGNESFGKIRINGVIVKRWFQPKLESPFSWEQTDFSFSQTRLRKGISHQQ 1129

Query: 508  RNIRTGNLSLE 476
            R IRTG+LSL+
Sbjct: 1130 RTIRTGDLSLD 1140


>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1109

 Score = 1107 bits (2864), Expect = 0.0
 Identities = 614/1120 (54%), Positives = 769/1120 (68%), Gaps = 25/1120 (2%)
 Frame = -1

Query: 3760 SISLIACNPTLLPLSPRTVRSQSSEFLS-FCHNLRPPGSLRSRRKCRSQRFKFHTHAHKF 3584
            ++SL++C+P    L PR       +FLS   H+LRPPG L SRR+CR+  F+F ++  +F
Sbjct: 11   TLSLLSCSPISSSLVPRR------QFLSGSTHSLRPPG-LHSRRRCRNIGFQFGSNTSRF 63

Query: 3583 RFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQISNTMNWV 3404
              RASL++Q+++               +L ++++  N     +    ++  Q+       
Sbjct: 64   VLRASLDSQTVVFASVVTISALTVV--FLEFSKRNTNANAKFKEEEKSVKIQMKE----- 116

Query: 3403 VGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIMDTF- 3227
            V    +  ED   +    +  D ++         T  +  + + +    S G+L +    
Sbjct: 117  VTKVSNEHEDGGTDVLQHDGTDLIQTF------VTNNIESVDTNQLAPSSNGSLTLGASV 170

Query: 3226 ---ESHSNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFVAEMSKVHLD------V 3074
                + S+ V SS    L+   L++               +     ++    D      V
Sbjct: 171  PNAHTESDAVPSSFVAELNNIYLQENLRMTKMSNILTTEEVREPEPIAHTESDAVPSSFV 230

Query: 3073 HGRKNVVPAELSRPDVVSAELSMPVVKTELSSAASQVNNLQAEVNQLERPNFELSK---- 2906
               KN+   E      +S  L+   V +E S A     N+     + ++ + EL      
Sbjct: 231  EESKNICLQEHLHETKMSNILTTEEVSSERSVALFPAINIDNRPEKTKKMDQELMTKDGC 290

Query: 2905 --------ESDIRSYDLILGDSVREGLYTFYEASLGNSDGLETLSSCGAFQK-NRFSLQT 2753
                    E ++  ++LI  DS RE LY+F+EAS  + +G + L+S  + Q    FS  +
Sbjct: 291  KKAHKFVAEDEVTIHNLIFRDSTREDLYSFFEASSKSLNGQDALTSHASLQGIGAFSPAS 350

Query: 2752 KNFSIE-DKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKIIFHQDSTKYLLPTSDLK 2576
            K FS+  + F  K    CYKEG F++ KD   R +  T+K+K I   +     L   + K
Sbjct: 351  KVFSVRAEDFEEKRSHGCYKEGPFNK-KDFLKRMQHFTNKEKSILPDNGASKQLQIPNPK 409

Query: 2575 GNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFHACKSQK 2396
            G       +   Q R Y   L+E RL DCIE+LEDM R G L+MDKVYH+ FF  CKSQK
Sbjct: 410  GIQVCDRPNPSDQFRDYRHFLREGRLMDCIEILEDMGRHGSLNMDKVYHAGFFQVCKSQK 469

Query: 2395 AVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKLYTTLIS 2216
            AVKEAFRFT+LI NPTLSTFNML++VCASS+D E AFQV Q V+E GLK DCKLYTTLIS
Sbjct: 470  AVKEAFRFTKLIRNPTLSTFNMLLTVCASSRDLERAFQVFQLVRETGLKPDCKLYTTLIS 529

Query: 2215 TCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILRSKNVKP 2036
            TCAK+GKVDTMF+VFHEMVNAG+EPN +TYG LIDGCAKAGQVAKAFGAYGI+RSKNVKP
Sbjct: 530  TCAKAGKVDTMFEVFHEMVNAGVEPNANTYGTLIDGCAKAGQVAKAFGAYGIMRSKNVKP 589

Query: 2035 DRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQVDRARE 1856
            DRVVFNALITACGQSGAVDRAFDVL+EM+AEA+PI+PD IT+GALMKACA+AGQVDRA E
Sbjct: 590  DRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALE 649

Query: 1855 VYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISALIDVAG 1676
            VY MI K +IKGT E+YTIAVN C++NG+WEFA  +Y+DM +KGV PDEMFISALIDVAG
Sbjct: 650  VYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAG 709

Query: 1675 HAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLNLKPTVP 1496
            H G+++AA EVL+ ARTKG+++G ISYSSLMGAC  A++WQKALE YED+K +NLKPTV 
Sbjct: 710  HTGKLEAAFEVLEEARTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVS 769

Query: 1495 MMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGLLLLSEA 1316
            MMNALITALC AD+ +KA E+  EMK + LCPNTITYS LLVASEKKDD++VGL+LLS A
Sbjct: 770  MMNALITALCYADQYQKALEIFSEMKKVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHA 829

Query: 1315 KKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMVYREAIV 1136
            KKDGV+PNLVMCRCL+AMC RR+QKACT GEPVL  +  RLQLD+KWTS ALMVYRE I 
Sbjct: 830  KKDGVAPNLVMCRCLLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIG 889

Query: 1135 SGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGEYDPRAI 956
            +GV PT +ELS VLGCL+LP D  L+ RL+EN   + + SKGSNL SLIDGFGEYDPRA 
Sbjct: 890  AGVVPTIEELSLVLGCLQLPCDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRAC 949

Query: 955  SLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAKLPNVNI 776
            SLLEEA+SLG++PL SFK + IV+DVRN  IH A+VYLLTVLK LKHRLAAGAK+PN++I
Sbjct: 950  SLLEEAASLGIVPLTSFKGSPIVVDVRNLHIHAAQVYLLTVLKSLKHRLAAGAKIPNISI 1009

Query: 775  LLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYGKIRINGVFIKKWFQ 596
            LLPVE++ IQTPTGEKTI IA RI++AVAALLRRLGL YQGNES+GKIRINGV +K+WFQ
Sbjct: 1010 LLPVEQSHIQTPTGEKTIKIAGRINRAVAALLRRLGLPYQGNESFGKIRINGVIVKRWFQ 1069

Query: 595  PKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
            PKL SPF    TD + SQ RL +GI HQQR IRTG+LSL+
Sbjct: 1070 PKLESPFSWEQTDFSFSQTRLRKGISHQQRTIRTGDLSLD 1109


>ref|XP_007041957.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao] gi|508705892|gb|EOX97788.1| Pentatricopeptide
            repeat-containing protein, putative [Theobroma cacao]
          Length = 1110

 Score = 1098 bits (2841), Expect = 0.0
 Identities = 610/1118 (54%), Positives = 774/1118 (69%), Gaps = 31/1118 (2%)
 Frame = -1

Query: 3736 PTLLPLSP-RTVRSQ---SSEFLSFCHNLRPPGSLRSRRKCRSQRFKFHTHAHKFRFRAS 3569
            PT  P SP R+  ++   S +FL F H LRPPG   S RK          H+ +F  RAS
Sbjct: 15   PTRPPSSPLRSCTNRPLISRQFLGFNHTLRPPGGASSLRKKNKTLGFLRLHSPRFIVRAS 74

Query: 3568 LEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQISNTMNWVVGSRG 3389
            +++  +L               Y  + RK  + K ++     AL QQ       V  +  
Sbjct: 75   IDSNLVLVVIGVTALSALSLACYNRFFRKIGSSKTVSGSSHSALPQQRLGKDGAVQTAES 134

Query: 3388 SHRE--DVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIMDTFESHS 3215
               +  D+ KE      +D  +E++E +Y   +  + +Q  ET   +  +L+  T +S  
Sbjct: 135  QVLDIGDLKKENFAKGKDDLKEEIKEATYASESKEALLQFQETTVANDDSLLHKTSDSSG 194

Query: 3214 N---MVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXS-LPFVAEMSKVHLDVHGRKNVVPA 3047
                 V ++G +V       D                L F AEMS++HL+   R N   A
Sbjct: 195  ADCLAVTANGFDVSEESGATDLPLPPTVLLESGAVEPLMFAAEMSELHLEEVERVNEFEA 254

Query: 3046 ELSRPDVVSAELSMPVVKTELSSAASQVNNLQAEVNQLERPNFELSKESDIRSYDLILGD 2867
            +L R            +  E  S+AS V    A V         L  E ++  +  I  +
Sbjct: 255  DLPR------------LAVEPESSASSVLVKDAHV---------LVGEGEVTRHYDIFKE 293

Query: 2866 SVREGLYTFYEA------SLGNSDGLETLSSCGAFQKNRFSLQTKNFSIEDKFARKGPLR 2705
            SVRE L+TFYEA      S  N +GL+  SS   F  N  S  +   + E K A+     
Sbjct: 294  SVREELHTFYEADQLVAKSSTNLNGLKPASS-RVFSPNSNSFSSLMQNSELKRAQLSSKN 352

Query: 2704 CYK-----EGSFSQQKDSR---------GR-KELKTDKDKIIFHQDSTKYLLPTSDLKGN 2570
            C +     EG  +Q   +R         GR +E+  DK K    Q+    L       G 
Sbjct: 353  CLQTADMAEGKVAQACSNRVSSHKRQDFGRGREIPRDKGKRHSIQEKNTKLPKFPFPNGM 412

Query: 2569 HANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFHACKSQKAV 2390
             A++ H      R Y++LL++ RLSDC+++LEDME++GLLDM+KVYH++FF  C  QKAV
Sbjct: 413  LADNKHRPEDHFRSYNRLLRDGRLSDCVDLLEDMEQRGLLDMNKVYHAKFFKICNRQKAV 472

Query: 2389 KEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKLYTTLISTC 2210
            KEAF FT+LIPNPTLSTFNMLMSVCASSQDS+GAF+VL+ VQEAG KADCKLYTTLISTC
Sbjct: 473  KEAFCFTKLIPNPTLSTFNMLMSVCASSQDSDGAFEVLRIVQEAGFKADCKLYTTLISTC 532

Query: 2209 AKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILRSKNVKPDR 2030
            AKSGKVDTMF+VFHEMVN+G+EPNV+TYGALIDGCA+AGQVAKAFGAYGI+RSKNVKPDR
Sbjct: 533  AKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDR 592

Query: 2029 VVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQVDRAREVY 1850
            VVFNALITACGQSGAVDRAFDVLAEM AE QPIDPDH+TVGAL+KAC++A QVDRAREVY
Sbjct: 593  VVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVDRAREVY 652

Query: 1849 NMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISALIDVAGHA 1670
             MIH+++IKGT E+YTIAVN C++ GDWEFAC VY+DM  KGVAPDE+FISALIDVAGHA
Sbjct: 653  KMIHEFSIKGTPEVYTIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHA 712

Query: 1669 GRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLNLKPTVPMM 1490
            G++DAA E+L+ A+ +G++VGI+SYSSLMGACS A++WQKALE YE++K++ L  TV  +
Sbjct: 713  GKLDAAFEILEEAKNQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTV 772

Query: 1489 NALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGLLLLSEAKK 1310
            NALIT+LC+AD+L KA E+L EM+ +GLCPNT+TYSILLVASE+KDD+EVGL+LLS+A+K
Sbjct: 773  NALITSLCEADQLPKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARK 832

Query: 1309 DGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMVYREAIVSG 1130
            DGV+PNL+M RC+I MCLRR++KAC  GEPVL F+  +  ++NKWTS AL VYRE IV+G
Sbjct: 833  DGVAPNLIMARCIIGMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAG 892

Query: 1129 VTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGEYDPRAISL 950
              PT D +SQ+LGCL+LP D+ L++RLVEN + S D ++ S+L SLIDGFGEYDPRA SL
Sbjct: 893  TAPTMDVISQILGCLQLPRDDSLKSRLVENLDVSADATRCSSLSSLIDGFGEYDPRAFSL 952

Query: 949  LEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAKLPNVNILL 770
            LEEA+S G++P +SFKE+ IV+D R  QI+ AEVYLLT+LKGLKHR AAGAKLP++++LL
Sbjct: 953  LEEAASFGIVPCVSFKESPIVVDARELQINMAEVYLLTILKGLKHRRAAGAKLPSISVLL 1012

Query: 769  PVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYGKIRINGVFIKKWFQPK 590
            P+EKTQ+ TP  EK+IN+A RI QA+AALLRR+GL YQGNES+GKIRING+ +K+WFQPK
Sbjct: 1013 PLEKTQVLTPEREKSINLAGRIGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQPK 1072

Query: 589  LNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
            L SPF G P + N+SQ RLG+GI HQQRNIRTGNLSL+
Sbjct: 1073 LASPFTGKPGEWNASQMRLGKGISHQQRNIRTGNLSLD 1110


>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Solanum lycopersicum]
          Length = 1182

 Score = 1097 bits (2836), Expect = 0.0
 Identities = 625/1193 (52%), Positives = 791/1193 (66%), Gaps = 93/1193 (7%)
 Frame = -1

Query: 3775 SLNSQSISLIACNPTLLPLSPRTVRSQSSEFLS-FCHNLRPPGSLRSRRKCRSQRFKFHT 3599
            S+ S  +SL++C+P    L PR       +FLS   H+LRPPG L SRR+CR+  F+F  
Sbjct: 3    SIFSPKLSLLSCSPISSSLVPRR------QFLSGSTHSLRPPG-LHSRRRCRNIGFQFGG 55

Query: 3598 HAHKFRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQIN----IKQMTRHLTVALSQ 3431
            +  +F  RASL++Q+++              V+L ++++  N     K+++  LT+AL +
Sbjct: 56   NTSRFVLRASLDSQTVV--FASVVTISALTVVFLEFSKRNTNANAKFKEISAELTLALRR 113

Query: 3430 QISNTMNWV---------------VGSRGSHREDVDKEAPDDESNDSMKELREMSYDY-T 3299
            QI + MNW                V ++      V  E  D E++    +   +   + T
Sbjct: 114  QIRHVMNWFPRHVFALINIQEEKSVKTQMKEVTKVSNEREDGEADVLQHDGTYLIQTFVT 173

Query: 3298 TTVSEMQSGETYKYSGGTLIMDTF----ESHSNMVGSS----GGEVLSFKKLEDTXXXXX 3143
              +  + + +    S G+L +        + S+ V SS       +   + ++ T     
Sbjct: 174  NNIESLDTNQLAPSSNGSLTLGASVPNEHTESDAVPSSFVADSNNIYLQENIQTTKMSNI 233

Query: 3142 XXXXXXXXSLP------------FVAEMSKVHLDVHGRKNVVPAELSRPDVVSAELSMPV 2999
                      P            FVAE + ++L  + R   +   L+  +V   E   P+
Sbjct: 234  LTTEEVREPEPIAHTESDVVPSSFVAESNNIYLQENLRTTKMSNILTTEEVREPE---PI 290

Query: 2998 VKTELSSAASQVN------NLQAEVNQLERPNF----ELSKE-----------------S 2900
              TE  +  S         NLQ  +++ +  N     E+S E                 +
Sbjct: 291  AHTESDAVPSSFMEESKNINLQEHLHETKMSNILTTEEVSSERSVALFPTINIDNRTEKT 350

Query: 2899 DIRSYDLILGDSV-----------------------REGLYTFYEASLGNSDGLETLSSC 2789
             I   +L++ D +                       RE LY+F+ AS  + +G + L+S 
Sbjct: 351  KIMDQELMMKDELKKAHRFVAEDEVIIHNLIFRDSTREDLYSFFGASSKSLNGQDALTSH 410

Query: 2788 GAFQK-NRFSLQTKNFSIE-DKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKIIFHQ 2615
             + Q    FS  +K FS+  + F  K    CYKE  F+++ D   R +  T+K+K I   
Sbjct: 411  ASRQGIGTFSPPSKAFSVRAEDFEEKRSHGCYKERPFNKE-DFVKRMQQFTNKEKSILSD 469

Query: 2614 DSTKYLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKV 2435
            +     L  S+ K        +   Q R Y   L+E RL DCI++LEDMER G L+MDKV
Sbjct: 470  NGASKQLQVSNPKSIQVCDRPNPSDQFRAYRHFLREGRLMDCIKILEDMERHGSLNMDKV 529

Query: 2434 YHSRFFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAG 2255
            YH+ FF  CKSQKAVKEAFRFT+LI NPTLSTFNML+SVCASS+D E AFQVLQ V+E G
Sbjct: 530  YHAGFFQVCKSQKAVKEAFRFTKLIQNPTLSTFNMLLSVCASSRDLERAFQVLQLVRETG 589

Query: 2254 LKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAF 2075
            LK DCKLYTTLISTCAK+GKVDTMF+VFHEMVNAG+EPN +TYGALIDGCAKAGQVAKAF
Sbjct: 590  LKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGALIDGCAKAGQVAKAF 649

Query: 2074 GAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMK 1895
            GAYGI+RSKNVKPDRVVFNALITACGQSGAVDRAFDVL+EM+AEA+PI+PD IT+GALMK
Sbjct: 650  GAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIEPDQITIGALMK 709

Query: 1894 ACASAGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAP 1715
            ACA++GQVDRA EVY MI K +IKGT E+YTIAVN C++NG+WEFA  +Y+DM +KGV P
Sbjct: 710  ACANSGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSIYDDMSKKGVNP 769

Query: 1714 DEMFISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEFY 1535
            DEMFISALIDVAGH G+++AA EVL+ AR KG+++G ISYSSLMGAC  AK+WQKALE Y
Sbjct: 770  DEMFISALIDVAGHTGKLEAAFEVLEEARAKGINLGSISYSSLMGACCNAKNWQKALELY 829

Query: 1534 EDVKSLNLKPTVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEKK 1355
            ED+K +NLKPTV MMNALITALC AD+ +KA E+  EMK + LCPNTITYS LLVASEKK
Sbjct: 830  EDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKRVDLCPNTITYSTLLVASEKK 889

Query: 1354 DDIEVGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKW 1175
            DD++VGL+LLS AKKDGV+PNLVMCRCL+AMC RR+QKACT GEPVL  +  RLQLD+KW
Sbjct: 890  DDLDVGLMLLSHAKKDGVAPNLVMCRCLLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKW 949

Query: 1174 TSSALMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYS 995
            TS ALMVYRE I +GV PT +ELS VLGCL+LP D  ++ RL+EN   + + SKGSNL S
Sbjct: 950  TSLALMVYRETIGAGVVPTIEELSLVLGCLQLPRDASIKERLIENLGLTVETSKGSNLCS 1009

Query: 994  LIDGFGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKH 815
            LIDGFGEYDPRA SLLEEA+SLG++PL SFK + IV+DVRN  IH A+VYLLTVLK LKH
Sbjct: 1010 LIDGFGEYDPRACSLLEEAASLGIVPLTSFKGSPIVVDVRNLHIHAAQVYLLTVLKSLKH 1069

Query: 814  RLAAGAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYGK 635
            RLAAGAK+PN++I+LPVE++ IQTPTG+KTI IA RI++AVAALLRRL L YQGNES+GK
Sbjct: 1070 RLAAGAKIPNISIVLPVEQSHIQTPTGQKTIKIAGRINRAVAALLRRLRLPYQGNESFGK 1129

Query: 634  IRINGVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
            IRINGV +K+WFQPKL SPF    T  + SQ RL +GI HQQR IRTG+LSL+
Sbjct: 1130 IRINGVIMKRWFQPKLESPFSWEQTGFSFSQTRLRKGISHQQRTIRTGDLSLD 1182


>ref|XP_010088683.1| hypothetical protein L484_003235 [Morus notabilis]
            gi|587846355|gb|EXB36850.1| hypothetical protein
            L484_003235 [Morus notabilis]
          Length = 1125

 Score = 1095 bits (2832), Expect = 0.0
 Identities = 600/1130 (53%), Positives = 760/1130 (67%), Gaps = 27/1130 (2%)
 Frame = -1

Query: 3784 MELSLNSQSISLIACNP----TLLPLSPRTVRSQSSEFLSFCHNLRPPGSLRSRRKCRSQ 3617
            +  S   Q ++LI+C P    +    S  ++RS   EFL   HNLRPPGSLRSR   R +
Sbjct: 3    VRFSAKPQILTLISCTPLSSSSSASPSRSSLRSIRREFLGCGHNLRPPGSLRSRG--RQR 60

Query: 3616 RFKFHTHAHKFRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVAL 3437
            +   H+ + +F FRASL +  +L               Y ++ + + N +++      AL
Sbjct: 61   KPWSHSRSSRFLFRASLGSHPVLVVVAVVTVSAASVV-YWNFFKSKKNAREVPGPANFAL 119

Query: 3436 SQQISNTMNWVVGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKY 3257
             Q   N MN V+ S+     DV +        D   E RE S+      + +Q       
Sbjct: 120  PQMGGNVMNHVIQSQMLDFGDVREMEVQQLLKD---ENRENSHASVEKQAPLQFHNATVM 176

Query: 3256 SGGTLIMDTFESHSNMV---GSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFVAEMSKV 3086
            +  TL+    +S  + V   G+S    L+   + D               L     ++  
Sbjct: 177  NQETLVTSALQSSGSGVLVSGASNSTFLNESSVLDQSLSPLLSESAILEPLNLPESLNGF 236

Query: 3085 HLDVHGRKNVVPAELSRPDVVSAELSMPVVKTELSSAASQVNNLQAEVNQLERPNFELSK 2906
             LD   R+ +  +E         +     ++ E+ S      +  AE+++ E     L +
Sbjct: 237  QLDKL-REEIESSESLFGSASVQDNGSVHLQEEIVSKFKVNGHSVAELHEDETDKRRLGE 295

Query: 2905 ESDIRSYDLILGDSVREGLYTFYEASLGNSDGLETLSSCGAFQKNRFSLQTKNFSIE--- 2735
            E ++ SY+ +LG+SVR+ L+ FY+ +  +  G+  ++   +   N  +  +K  S     
Sbjct: 296  EGEMTSYNFLLGESVRKELHMFYDENKSDEKGIGKINGHNSLSPNASAPNSKTVSASLRD 355

Query: 2734 -----------------DKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKIIFHQDST 2606
                             D    K P   +KEG+    K+S   +    D  K    Q++ 
Sbjct: 356  TIVKGGEATALFPPLKADNHESKIPFSSHKEGTLRSGKNSGQGRGYSRDLIKGNLAQNNH 415

Query: 2605 KYLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHS 2426
            K     + L G      H    Q+  Y++L+K+ RLSD +E+LEDMER+GLLDM+KVYH+
Sbjct: 416  KAPAKLTRLNGLDVEQKHHPSEQISTYNRLVKDGRLSDAVELLEDMERRGLLDMNKVYHA 475

Query: 2425 RFFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKA 2246
            +FF  CK QKAV EAFR+  LIP PTLST+NMLMSVC SSQD EGAF+V+Q VQEAGLKA
Sbjct: 476  KFFKICKFQKAVNEAFRYVNLIPYPTLSTYNMLMSVCTSSQDPEGAFKVMQLVQEAGLKA 535

Query: 2245 DCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAY 2066
            DCKLYTTLISTCAKSGKVD+MF+VFH+MVN G+EPNVHTYG+LIDGCA+AGQVAKAFGAY
Sbjct: 536  DCKLYTTLISTCAKSGKVDSMFEVFHKMVNDGVEPNVHTYGSLIDGCARAGQVAKAFGAY 595

Query: 2065 GILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACA 1886
            GI+RSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE + IDPDHITVGALMKACA
Sbjct: 596  GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTAEPELIDPDHITVGALMKACA 655

Query: 1885 SAGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEM 1706
            ++GQVDRAREVY M+H+YN+KGT E+YTIAVN+ +  GDWEFA  VY+DM +KGV PDEM
Sbjct: 656  NSGQVDRAREVYKMVHQYNLKGTPEVYTIAVNTSSHMGDWEFARNVYDDMTRKGVLPDEM 715

Query: 1705 FISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDV 1526
            F+SALID AGHAG++DAA E+L  A+ +G+  G +SYSSLMGACS AK+WQKALE YED+
Sbjct: 716  FLSALIDAAGHAGKLDAAFEILSEAKNRGVKFGTVSYSSLMGACSNAKNWQKALELYEDL 775

Query: 1525 KSLNLKPTVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEKKDDI 1346
            KS   + TV  +NALITALCD D+L+KA EVL EMK++GL PN+ITYSILLVASEKKDD+
Sbjct: 776  KSTKSEQTVSTVNALITALCDGDQLQKAMEVLSEMKALGLSPNSITYSILLVASEKKDDL 835

Query: 1345 EVGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSS 1166
            EVGL+L S+AKKDG+SPNL+M RC++  CLRRY+ A T GEPVL F P R Q+ NKWTSS
Sbjct: 836  EVGLVLFSQAKKDGISPNLLMSRCILGTCLRRYENASTLGEPVLSFDPGRPQVVNKWTSS 895

Query: 1165 ALMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLID 986
            ALMVYR+ I +GVTPT D LSQVLGCL+LPHD  L+NRL+EN   S D S+ SNL SLID
Sbjct: 896  ALMVYRDTIAAGVTPTIDVLSQVLGCLQLPHDPSLKNRLIENLAVSVDTSRPSNLSSLID 955

Query: 985  GFGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLA 806
            GFGEYDPRA SLLEEA+S G+I  +SFK++ +++D R  QIHTAEVYLLTVLKGLK+RLA
Sbjct: 956  GFGEYDPRAFSLLEEAASFGIISCVSFKQSPVIVDTRELQIHTAEVYLLTVLKGLKNRLA 1015

Query: 805  AGAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYGKIRI 626
            AGAKLP + ILLPVEK Q+ +P  EKTIN+A RI +AVAALLRRLGL YQG+ES+GKIRI
Sbjct: 1016 AGAKLPTITILLPVEKAQLTSPKEEKTINLAGRIGRAVAALLRRLGLPYQGHESHGKIRI 1075

Query: 625  NGVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
             G+ +K+WF+PKL SPF G P ++N SQ RLG+ I HQQRNIRTGNLSL+
Sbjct: 1076 YGLTLKRWFKPKLASPFSGRPEEINLSQFRLGKEIAHQQRNIRTGNLSLD 1125


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score = 1087 bits (2811), Expect = 0.0
 Identities = 602/1063 (56%), Positives = 740/1063 (69%), Gaps = 25/1063 (2%)
 Frame = -1

Query: 3589 KFRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMTRHLTVALSQQISNTMN 3410
            +F F+ASL +Q +L               +LSY+R++ N ++++     A+SQ   + MN
Sbjct: 502  RFYFKASLGSQPVLVVVAVAAVFAFSVV-FLSYSRRRKNSREVSGPSGFAISQLSRDVMN 560

Query: 3409 WVVGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGETYKYSGGTLIMDT 3230
              + S      D+ KE  + ES  +M  + E+S+      +  Q  E       T + +T
Sbjct: 561  QFMESAILGFGDLHKETSEKESRATMDIVEEVSHASKDKEAPWQ--EIALMQEETHVTNT 618

Query: 3229 FESHS-NMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLP---FVAEMSKVHLDVHGRK 3062
             ES   +++ S+    +S ++ E+               L    F  EM ++ L+     
Sbjct: 619  SESSRLDVLSSNAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQLE----- 673

Query: 3061 NVVPAELSRPDVVSAELSMPVVKTELSSAASQVNNLQAE-VNQLERPNFELSKESDIRSY 2885
                 E         +LS PVV+T+ S AAS  + +  E VN+ +       +ES+I S+
Sbjct: 674  -----ERQMETEFGYDLSTPVVQTK-SIAASVPDIIALEGVNERKNRGGRPGEESEIISF 727

Query: 2884 DLILGDSVREGLYTFYEAS------LGNSDGLETLSS-CGAFQKNRFSLQTKN------- 2747
              I  D++RE LYTFYEA       + N +G++TL+S       N  S Q +N       
Sbjct: 728  TGIFRDTIREELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAE 787

Query: 2746 ------FSIEDKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKIIFHQDSTKYLLPTS 2585
                   S  D    K  L CYKEGS  ++ D    K    DK+  +      + L    
Sbjct: 788  LSAQNSHSSADYVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFP 847

Query: 2584 DLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFHACK 2405
               G      +    +   Y++LL E RLSDCI++LEDME+ GLLDMDKVYH++FF  C+
Sbjct: 848  LSNGMTVKEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICR 907

Query: 2404 SQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKLYTT 2225
            SQKAV EAFRF +LIP PTLSTFNMLMSVCA+SQDS GAFQVLQ V+EAGLKADCKLYTT
Sbjct: 908  SQKAVTEAFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTT 967

Query: 2224 LISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILRSKN 2045
            LISTCAKSGKVD MF+VFHEMVNA +EPNVHTYGALIDGC +AGQVAKAFGAYGI+RSK 
Sbjct: 968  LISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKK 1027

Query: 2044 VKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQVDR 1865
            V+PDRVVFNALITACGQSGAVDRAFDVLAEMRAE QPIDPDHITVGAL+KAC +AGQVDR
Sbjct: 1028 VEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDR 1087

Query: 1864 AREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISALID 1685
            AREVY MI +YNIKGT E+YTIAV+S ++ GDWEFA  VY DM +KGV PDEMF+SALID
Sbjct: 1088 AREVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALID 1147

Query: 1684 VAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLNLKP 1505
            VAGHAG++DAA EV+Q AR +G+ +GI+SYSSLMGACS AK+WQKALE Y D+KS+ L P
Sbjct: 1148 VAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNP 1207

Query: 1504 TVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGLLLL 1325
            TV  MNALITALC+ ++LEKA EVL +MK  GLCPNTITYSILLVASEKKDDI+VGL++L
Sbjct: 1208 TVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMIL 1267

Query: 1324 SEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMVYRE 1145
            S+A+KD V+PNLVMCRCL+ MCLRR++KAC  GEPVL F+  R Q+DNKWTSSALMVYRE
Sbjct: 1268 SQARKDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRE 1327

Query: 1144 AIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGEYDP 965
             + +GV PT + LSQVLGCL+ P D  LRNRL+EN   S D S+ SNL SLIDGFGEYD 
Sbjct: 1328 TVSAGVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDS 1387

Query: 964  RAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAKLPN 785
            RA SLLEEA+SLGV+  +SFK++ +++D R  QI  AEVYLLTVLKGLKHRLAAGAKLP+
Sbjct: 1388 RAFSLLEEAASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPS 1447

Query: 784  VNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYGKIRINGVFIKK 605
            + ILLP E TQ+  P GEK IN+A RISQAVA++LRRLGL YQGNES GKIRING+  ++
Sbjct: 1448 MTILLPTETTQVLAPKGEKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRR 1507

Query: 604  WFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
            WFQPKL  PF G   +++SSQ+RLG GI  QQR IRTGNLSL+
Sbjct: 1508 WFQPKLAGPFSGKVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1550


>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1129

 Score = 1080 bits (2794), Expect = 0.0
 Identities = 600/1139 (52%), Positives = 755/1139 (66%), Gaps = 37/1139 (3%)
 Frame = -1

Query: 3784 MELSLNSQSISLIACNPTLLPLSPRTVRSQSSEFLSFCHNLRPPGSLRSRRKCRSQRFKF 3605
            MELS + +S SL   + T    S         +FL   HNLRPPGS    R  +S++ K 
Sbjct: 1    MELSFSPKSQSLALLSTTNTKFSSTKSSFIRRQFLGCSHNLRPPGSASPLRGRKSKKIKI 60

Query: 3604 H--THAHKFRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQINIKQMT--RHLTVAL 3437
                 +      AS    S+L                  +   + N K+ T    L   L
Sbjct: 61   REKNQSQSLLINASFRLDSVLVVVAVSTFSALSFAYLHHHFTNKNNKKRKTSKEDLGDGL 120

Query: 3436 SQQISNTMNWVVGSRG---SHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQSGET 3266
            SQ   N +N +V S      H   V     + +S D +   RE SY     +  +   ET
Sbjct: 121  SQLGKNIVNNIVRSPFLDVGHLHKVTSTTLEVKSKDLVDNARENSY----VIENVLPNET 176

Query: 3265 YKYSGGTLIMDTFESHSNM------VGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFV 3104
                  ++++++ ES  N       + +    ++   + ++               +   
Sbjct: 177  ------SVLVESTESDKNSYVIENALSNETSVLVESTESDNNSADFTVSSNVCTYVVSKQ 230

Query: 3103 AEMSKVHLD----VHGRKNVVPAELSRPDVVSAELSMPVVKTELSSAASQVNNLQAEVNQ 2936
            ++ + V LD    +HG ++V+P E +R ++    +     +TE+ S  +Q+   ++    
Sbjct: 231  SDNASVLLDPVPVIHGSESVLPLEFAR-ELSELTIERSRDETEVDSELTQLLEEKSNDTA 289

Query: 2935 LERPNFELSKESDIRSYDLILGDSVREGLYTFYEASLG------NSDGLETLSSCGA--F 2780
                N E+ K+  I SY  I   S RE LY FYE S        N +GL+T+SS  A   
Sbjct: 290  SSTMNDEIGKKDGISSYYDITKKSAREDLYKFYEESQSTEKSPSNLNGLDTVSSHAAPLI 349

Query: 2779 QKNRFSLQTKNFSIE------------DKFARKGPLRCYKEGSFSQQKDSRGRKELKTDK 2636
              N  SL+      E            +   RK  L  Y+ G+  + +   GR+    +K
Sbjct: 350  GNNISSLKVNGVGKEAELLSPQSPQFAETVERKVHLARYERGASRKNEHIGGRRGFPREK 409

Query: 2635 DKIIFHQDSTKYLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKG 2456
            +K    QD    L       G H+ +      Q+  Y++LL++ RL++C+++LEDMER+G
Sbjct: 410  EKGHVIQDEHTNLPEFPYPNGVHSTNKDHKAEQVHGYNRLLRDGRLAECVDLLEDMERRG 469

Query: 2455 LLDMDKVYHSRFFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVL 2276
            LLDM K+YH++FF  CK QKAVKEAFRF +L+PNP+LSTFNMLMSVC+SSQDS+GAF+VL
Sbjct: 470  LLDMSKIYHAKFFKICKIQKAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEVL 529

Query: 2275 QHVQEAGLKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKA 2096
            +  Q AGLKADCKLYTTLISTCAKSGKVD MF+VFHEMVNAG+EPNVHTYG+LIDGCAKA
Sbjct: 530  RLAQGAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAKA 589

Query: 2095 GQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHI 1916
            GQ+AKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE  PIDPDHI
Sbjct: 590  GQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAETHPIDPDHI 649

Query: 1915 TVGALMKACASAGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDM 1736
            TVGALMKACA AGQVDRA+EVYNM+HKYNIKGT E+YTIAVN C++ GDWEFA  VY+DM
Sbjct: 650  TVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDM 709

Query: 1735 IQKGVAPDEMFISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDW 1556
             +KGVAPDEMF+SAL+DVAGHAG VD A E LQ ART+G  +GI+ YSSLMGACS AK+W
Sbjct: 710  TRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNW 769

Query: 1555 QKALEFYEDVKSLNLKPTVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSIL 1376
            QKALE YED+K++ LKPTV  MNAL+TALCD D+L+KA E L EMKS GLCPN +TYSIL
Sbjct: 770  QKALELYEDIKAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPNIVTYSIL 829

Query: 1375 LVASEKKDDIEVGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRR 1196
            LVASE+KDD++ G +LLS+AK+D ++P  +M +C+I MCLRRY+KAC+ GE +L F   R
Sbjct: 830  LVASERKDDLDAGDMLLSQAKEDCITPTFLMYKCIIGMCLRRYKKACSLGESILSFDSGR 889

Query: 1195 LQLDNKWTSSALMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNS 1016
             Q+ N+WTS AL VYRE I +G  PT + +SQVLGCL+LP D  L+ RLVEN   + D S
Sbjct: 890  PQIKNEWTSRALTVYRETIAAGEKPTMEVVSQVLGCLQLPCDASLKGRLVENLGVTADPS 949

Query: 1015 KGSNLYSLIDGFGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLT 836
            K SNL +L+DGFGEYDPRA SLLEEA+SLG +P  SFKE+ IV+D +  Q H AEVYLLT
Sbjct: 950  KFSNLCALVDGFGEYDPRAFSLLEEAASLGTVPCASFKESPIVMDAKLLQSHIAEVYLLT 1009

Query: 835  VLKGLKHRLAAGAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQ 656
            +LKGLKHRLAAGAKLPN+ ILLP E TQI+T  GEKTIN+A RISQ VA+LLRRLGL YQ
Sbjct: 1010 ILKGLKHRLAAGAKLPNITILLPTEMTQIKTLKGEKTINLAGRISQDVASLLRRLGLPYQ 1069

Query: 655  GNESYGKIRINGVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSL 479
            GNESYGKIRING+ +++W QPKL SPF G P +++ S +R+G+GI HQQRNIRTGNLSL
Sbjct: 1070 GNESYGKIRINGISLRRWLQPKLASPFSGKPEELSFSLSRIGKGITHQQRNIRTGNLSL 1128


>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
            gi|550341229|gb|EEE86674.2| hypothetical protein
            POPTR_0004s17400g [Populus trichocarpa]
          Length = 1104

 Score = 1080 bits (2794), Expect = 0.0
 Identities = 606/1136 (53%), Positives = 770/1136 (67%), Gaps = 33/1136 (2%)
 Frame = -1

Query: 3784 MELSLNSQSISLIACNPTLLPLSPRTVRSQSSEFLS-FCHNL-RPPGSLRSRRKCRSQRF 3611
            MEL+  SQ+++L   + TL  ++ R  R    +F+  F HNL RPP S     + R ++ 
Sbjct: 1    MELA-KSQTLTLTQIS-TLTSINQRGHR----QFIGCFGHNLIRPPSSAGLLLRYRGRKL 54

Query: 3610 KFHTHAHK-FRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQI-NIKQMTRHL---- 3449
            +   + +K F  +ASL+A S+L               Y  Y    I N K++T       
Sbjct: 55   RVQRNGNKRFVVKASLDANSVLVVVAVTAFSALSLAYYNRYINSNIKNSKKITSSSIQVL 114

Query: 3448 ---TVALSQQISNTMNWVVGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQ 3278
               + A SQ   + +N + GS+  H   + +EA + ES  S+++  E S+++    + +Q
Sbjct: 115  GSPSFAFSQLGRSIVNQITGSQFLHFGGLHREAREVESQGSVEKASENSHEFEEKETHVQ 174

Query: 3277 SGETYKYSGGTLIMDTFESHSNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFVAE 3098
              ET    G +L++   ES       SG   ++    +                LP V  
Sbjct: 175  FQETASLHGSSLLIKAVES-------SGANFVAANVCDTVVVEESEVGDARVSPLPSVLS 227

Query: 3097 MSKVHLDV--HGRKNVVPAELSRPDV-VSAELSMPVVKTELSSAASQVNNLQAEVNQLER 2927
             S   L +    +   +  E S  ++   +ELS  V K + ++    V+N          
Sbjct: 228  ESGSALPLIFATQMTELTQEKSGEEIEFGSELSGSVEKVKSNAVLVPVDN---------- 277

Query: 2926 PNFELSKESDIRSYDLILGDSVREGLYTFYEA------SLGNSDGLETLSSCGAFQKNRF 2765
               E  +++++ SY+  +  SVRE LYTFY A      S  N    ET S     +  RF
Sbjct: 278  ---ESIEKAELSSYNGAISQSVREDLYTFYGANRSVVKSASNLGLKETSSHASLLKSKRF 334

Query: 2764 S-------LQTKNFSIE------DKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKII 2624
            S       L+T++ S +      D   +  P   Y+ GSF + K+  G KE K       
Sbjct: 335  SSLKMNTGLETEDLSSQQPLQAADHVQKTMPPAHYEGGSFHKSKNLPGSKERKHPI---- 390

Query: 2623 FHQDSTKYLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDM 2444
              QDS   L       G  +        +   Y++LL+E RL++C+++LEDMER+GLLDM
Sbjct: 391  --QDSHSKLRQLPSPNGIPSKVKDHPPEEYNAYNRLLREGRLAECLDLLEDMERRGLLDM 448

Query: 2443 DKVYHSRFFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQ 2264
            +KVYH +FF  C+SQKAVKEAFRF +L+ NPTLSTFNMLMSVCA+SQ+S GAF+VLQ  +
Sbjct: 449  NKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVCATSQNSAGAFEVLQLAK 508

Query: 2263 EAGLKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVA 2084
              GLKADCKLYTTLISTCAKSGKVD MF+VFHEMVNAG+EPNVHTYGALIDGCA+AGQVA
Sbjct: 509  AVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQVA 568

Query: 2083 KAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGA 1904
            KAFGAYGI+RSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM  EAQPIDPDHITVGA
Sbjct: 569  KAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQPIDPDHITVGA 628

Query: 1903 LMKACASAGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKG 1724
            L+KAC +AGQVDRA+EVYNM+HKYNIKGT E+YTIA+NSC++ GDWEFAC VY+DM +KG
Sbjct: 629  LIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQIGDWEFACKVYDDMTRKG 688

Query: 1723 VAPDEMFISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKAL 1544
            V PDEMF+SALIDVAGHAG++DAA E++Q A+ KG  +GII YSSLMGAC  AK+WQK L
Sbjct: 689  VVPDEMFLSALIDVAGHAGKMDAAFEIIQVAKAKGAQLGIIPYSSLMGACCNAKNWQKGL 748

Query: 1543 EFYEDVKSLNLKPTVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVAS 1364
            E YED+KS+ +KPTV  MNALITALCD D+L KA EVL EMK+ GL PNTITYSIL VAS
Sbjct: 749  ELYEDIKSMKIKPTVATMNALITALCDGDQLPKALEVLSEMKAWGLRPNTITYSILSVAS 808

Query: 1363 EKKDDIEVGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLD 1184
            E+KDD+E GL+LLS+AKKD V+P L+M +C+I+MCLR+++ ACT GE VL F+  R Q++
Sbjct: 809  ERKDDLEAGLMLLSQAKKDCVAPTLIMSKCIISMCLRKFENACTLGEAVLSFNSGRAQIE 868

Query: 1183 NKWTSSALMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSN 1004
            NKWTS ALMVYR  + +G  PT + +SQVLGCL++P D  L+NRLVEN   +  +S+ SN
Sbjct: 869  NKWTSVALMVYRGTMAAGEKPTIELVSQVLGCLQIPCDATLKNRLVENLGVTAVSSRYSN 928

Query: 1003 LYSLIDGFGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKG 824
            L SL+DGFGEYDPRA SLLEEA+SLG++P +SFKE+ I +D +  QIH AEVY LT+LKG
Sbjct: 929  LCSLVDGFGEYDPRAFSLLEEAASLGIVPCVSFKESPITMDAKQLQIHIAEVYFLTILKG 988

Query: 823  LKHRLAAGAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNES 644
            LKHRLAAGAKLPNV ILLPVEK Q+ T  GEKTIN+A RIS+AVA+LLRRLGL YQGNES
Sbjct: 989  LKHRLAAGAKLPNVTILLPVEKAQVITLEGEKTINVAGRISRAVASLLRRLGLPYQGNES 1048

Query: 643  YGKIRINGVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
            YGKIRING+ +++W QPKL+SPF G P + ++S +RLG+GI  QQRNIRTG+ SLE
Sbjct: 1049 YGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLGKGISFQQRNIRTGDFSLE 1104


>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 1072

 Score = 1077 bits (2786), Expect = 0.0
 Identities = 535/745 (71%), Positives = 626/745 (84%)
 Frame = -1

Query: 2710 LRCYKEGSFSQQKDSRGRKELKTDKDKIIFHQDSTKYLLPTSDLKGNHANHMHDSLWQLR 2531
            L C++EG   + K  R  +    + ++I   QD  K +L      G HAN+ HD   QL 
Sbjct: 330  LACHREGPSHKIKARRRIRNFPRNNERINLMQDVGKNMLQFPYPNGKHANYAHDVSEQLH 389

Query: 2530 VYHQLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFHACKSQKAVKEAFRFTRLIPNP 2351
             Y++L+++ R+SDCI++LEDMERKGLLDMDKVYH+RFF+ CKSQKA+KEAFRF +L+PNP
Sbjct: 390  SYNRLIRQGRISDCIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNP 449

Query: 2350 TLSTFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKLYTTLISTCAKSGKVDTMFKVF 2171
            TLSTFNMLMSVCASS+DSEGAFQVL+ VQEAGLKADCKLYTTLI+TCAKSGKVD MF+VF
Sbjct: 450  TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVF 509

Query: 2170 HEMVNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQS 1991
            HEMVNAG+EPNVHTYGALIDGCAKAGQVAKAFGAYGI+RSKNVKPDRVVFNALITACGQS
Sbjct: 510  HEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQS 569

Query: 1990 GAVDRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQVDRAREVYNMIHKYNIKGTAE 1811
            GAVDRAFDVLAEM AE  P+DPDHIT+GALMKACA+AGQVDRAREVY MIHKYNIKGT E
Sbjct: 570  GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPE 629

Query: 1810 LYTIAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISALIDVAGHAGRVDAAVEVLQAA 1631
            +YTIA+N C++ GDWEFAC VY+DM +KGV PDE+F+SALID AGHAG+V+AA E+LQ A
Sbjct: 630  VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 689

Query: 1630 RTKGMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLNLKPTVPMMNALITALCDADEL 1451
            + +G+ VGIISYSSLMGACS AK+WQKALE YE +KS+ LKPTV  MNALITALCD D L
Sbjct: 690  KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDRL 749

Query: 1450 EKATEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGLLLLSEAKKDGVSPNLVMCRCL 1271
             K  EVL +MKS+GLCPNTITYSILLVA E+KDD+EVGL+LLS+AK+DGV PNLVM +C+
Sbjct: 750  PKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCI 809

Query: 1270 IAMCLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMVYREAIVSGVTPTTDELSQVLG 1091
            I MC RRY+KA T  E VL F+  R Q++NKWTS  LMVYREAIV+G  PT + +S+VLG
Sbjct: 810  IGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLG 869

Query: 1090 CLRLPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGEYDPRAISLLEEASSLGVIPLI 911
            CL+LP++  +R RLVEN   S D  K SNL SLIDGFGEYDPRA SLLEEA+S G++P +
Sbjct: 870  CLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCV 929

Query: 910  SFKENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAKLPNVNILLPVEKTQIQTPTGE 731
            SFKE+ +V+D R  +IHTA+VYLLT+LKGL+HRLAAGAKLPNVNILLPVEKTQI +  GE
Sbjct: 930  SFKESPVVVDARKLEIHTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGE 989

Query: 730  KTINIASRISQAVAALLRRLGLTYQGNESYGKIRINGVFIKKWFQPKLNSPFRGTPTDMN 551
            KTI+IA R +QA+AALLRRLGL YQGN SYGKIRING+ +K+WFQPKL SPF G P +++
Sbjct: 990  KTIDIAERTTQAIAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASPFSGKPGELS 1049

Query: 550  SSQARLGRGIIHQQRNIRTGNLSLE 476
            S Q  LG+ I HQQRNIRTGNLSLE
Sbjct: 1050 SLQ--LGKFITHQQRNIRTGNLSLE 1072


>ref|XP_010315357.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Solanum lycopersicum]
          Length = 1151

 Score = 1073 bits (2776), Expect = 0.0
 Identities = 606/1162 (52%), Positives = 772/1162 (66%), Gaps = 62/1162 (5%)
 Frame = -1

Query: 3775 SLNSQSISLIACNPTLLPLSPRTVRSQSSEFLS-FCHNLRPPGSLRSRRKCRSQRFKFHT 3599
            S+ S  +SL++C+P    L PR       +FLS   H+LRPPG L SRR  R +   F  
Sbjct: 3    SIFSPKLSLLSCSPISSSLVPRR------QFLSGSTHSLRPPG-LHSRR--RCRNIGFQF 53

Query: 3598 HAHKFRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQIN-----------IKQMTRH 3452
              +  RF       S                V+L ++++  N           +K   + 
Sbjct: 54   GGNTSRFVLRASLDSQTVVFASVVTISALTVVFLEFSKRNTNANAKFKEEEKSVKTQMKE 113

Query: 3451 LT-------------------------------------VALSQQISNTMNWVVGSRGSH 3383
            +T                                     +A S   S T+   V +  + 
Sbjct: 114  VTKVSNEREDGEADVLQHDGTYLIQTFVTNNIESLDTNQLAPSSNGSLTLGASVPNEHTE 173

Query: 3382 REDVDKEAPDDESNDSMKE-LREMSYDYTTTVSEMQSGETYKYSGGTLIMDTFESHSNMV 3206
             + V      D +N  ++E ++        T  E++  E   ++   ++  +F + SN +
Sbjct: 174  SDAVPSSFVADSNNIYLQENIQTTKMSNILTTEEVREPEPIAHTESDVVPSSFVAESNNI 233

Query: 3205 -------GSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFVAEMSKVHLDVHGRKNVVPA 3047
                    +    +L+ +++ +              S  F+ E   ++L  H  +  +  
Sbjct: 234  YLQENLRTTKMSNILTTEEVREPEPIAHTESDAVPSS--FMEESKNINLQEHLHETKMSN 291

Query: 3046 ELSRPDVVSAELSM---PVVKTELSSAASQVNNLQAEVNQLERPNFELSKESDIRSYDLI 2876
             L+  +V S+E S+   P +  +  +  +++ + +  +    +       E ++  ++LI
Sbjct: 292  ILTTEEV-SSERSVALFPTINIDNRTEKTKIMDQELMMKDELKKAHRFVAEDEVIIHNLI 350

Query: 2875 LGDSVREGLYTFYEASLGNSDGLETLSSCGAFQK-NRFSLQTKNFSIE-DKFARKGPLRC 2702
              DS RE LY+F+ AS  + +G + L+S  + Q    FS  +K FS+  + F  K    C
Sbjct: 351  FRDSTREDLYSFFGASSKSLNGQDALTSHASRQGIGTFSPPSKAFSVRAEDFEEKRSHGC 410

Query: 2701 YKEGSFSQQKDSRGRKELKTDKDKIIFHQDSTKYLLPTSDLKGNHANHMHDSLWQLRVYH 2522
            YKE  F+++ D   R +  T+K+K I   +     L  S+ K        +   Q R Y 
Sbjct: 411  YKERPFNKE-DFVKRMQQFTNKEKSILSDNGASKQLQVSNPKSIQVCDRPNPSDQFRAYR 469

Query: 2521 QLLKESRLSDCIEMLEDMERKGLLDMDKVYHSRFFHACKSQKAVKEAFRFTRLIPNPTLS 2342
              L+E RL DCI++LEDMER G L+MDKVYH+ FF  CKSQKAVKEAFRFT+LI NPTLS
Sbjct: 470  HFLREGRLMDCIKILEDMERHGSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIQNPTLS 529

Query: 2341 TFNMLMSVCASSQDSEGAFQVLQHVQEAGLKADCKLYTTLISTCAKSGKVDTMFKVFHEM 2162
            TFNML+SVCASS+D E AFQVLQ V+E GLK DCKLYTTLISTCAK+GKVDTMF+VFHEM
Sbjct: 530  TFNMLLSVCASSRDLERAFQVLQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEM 589

Query: 2161 VNAGLEPNVHTYGALIDGCAKAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAV 1982
            VNAG+EPN +TYGALIDGCAKAGQVAKAFGAYGI+RSKNVKPDRVVFNALITACGQSGAV
Sbjct: 590  VNAGVEPNANTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 649

Query: 1981 DRAFDVLAEMRAEAQPIDPDHITVGALMKACASAGQVDRAREVYNMIHKYNIKGTAELYT 1802
            DRAFDVL+EM+AEA+PI+PD IT+GALMKACA++GQVDRA EVY MI K +IKGT E+YT
Sbjct: 650  DRAFDVLSEMKAEARPIEPDQITIGALMKACANSGQVDRALEVYRMIDKCDIKGTPEVYT 709

Query: 1801 IAVNSCNRNGDWEFACLVYNDMIQKGVAPDEMFISALIDVAGHAGRVDAAVEVLQAARTK 1622
            IAVN C++NG+WEFA  +Y+DM +KGV PDEMFISALIDVAGH G+++AA EVL+ AR K
Sbjct: 710  IAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARAK 769

Query: 1621 GMHVGIISYSSLMGACSKAKDWQKALEFYEDVKSLNLKPTVPMMNALITALCDADELEKA 1442
            G+++G ISYSSLMGAC  AK+WQKALE YED+K +NLKPTV MMNALITALC AD+ +KA
Sbjct: 770  GINLGSISYSSLMGACCNAKNWQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKA 829

Query: 1441 TEVLFEMKSIGLCPNTITYSILLVASEKKDDIEVGLLLLSEAKKDGVSPNLVMCRCLIAM 1262
             E+  EMK + LCPNTITYS LLVASEKKDD++VGL+LLS AKKDGV+PNLVMCRCL+AM
Sbjct: 830  LEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCLLAM 889

Query: 1261 CLRRYQKACTSGEPVLPFSPRRLQLDNKWTSSALMVYREAIVSGVTPTTDELSQVLGCLR 1082
            C RR+QKACT GEPVL  +  RLQLD+KWTS ALMVYRE I +GV PT +ELS VLGCL+
Sbjct: 890  CSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLGCLQ 949

Query: 1081 LPHDEFLRNRLVENFEFSTDNSKGSNLYSLIDGFGEYDPRAISLLEEASSLGVIPLISFK 902
            LP D  ++ RL+EN   + + SKGSNL SLIDGFGEYDPRA SLLEEA+SLG++PL SFK
Sbjct: 950  LPRDASIKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLTSFK 1009

Query: 901  ENTIVLDVRNFQIHTAEVYLLTVLKGLKHRLAAGAKLPNVNILLPVEKTQIQTPTGEKTI 722
             + IV+DVRN  IH A+VYLLTVLK LKHRLAAGAK+PN++I+LPVE++ IQTPTG+KTI
Sbjct: 1010 GSPIVVDVRNLHIHAAQVYLLTVLKSLKHRLAAGAKIPNISIVLPVEQSHIQTPTGQKTI 1069

Query: 721  NIASRISQAVAALLRRLGLTYQGNESYGKIRINGVFIKKWFQPKLNSPFRGTPTDMNSSQ 542
             IA RI++AVAALLRRL L YQGNES+GKIRINGV +K+WFQPKL SPF    T  + SQ
Sbjct: 1070 KIAGRINRAVAALLRRLRLPYQGNESFGKIRINGVIMKRWFQPKLESPFSWEQTGFSFSQ 1129

Query: 541  ARLGRGIIHQQRNIRTGNLSLE 476
             RL +GI HQQR IRTG+LSL+
Sbjct: 1130 TRLRKGISHQQRTIRTGDLSLD 1151


>ref|XP_010255161.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Nelumbo nucifera]
          Length = 1133

 Score = 1069 bits (2765), Expect = 0.0
 Identities = 592/1134 (52%), Positives = 775/1134 (68%), Gaps = 23/1134 (2%)
 Frame = -1

Query: 3808 TFSL*ISTMELSLNS--QSISLIACNPTLLPLSPRTVRSQSS--------EFLSFCHNLR 3659
            + SL +++M+++L++  Q+++LI+C       S  +  S SS        EFL  C  LR
Sbjct: 28   SLSLRLASMDVNLSAKAQNLTLISCFTISSSYSSSSSSSTSSPRFCSLRREFLGSCDRLR 87

Query: 3658 PPGSLRSRRKCRSQRFKFHTHAHKFRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQ 3479
             PG+ RSRRKC+  +  F   + +   RASL ++  L              VY  +TR++
Sbjct: 88   FPGA-RSRRKCK--KLGFLIQSPRLLPRASLYSKPFL-VIVAIATFSALTVVYSVHTRRK 143

Query: 3478 INIKQMT------RHLTVALSQQISNTMNWVVGSRGSHREDVDKEAPDDESNDSMKELRE 3317
             + ++ +          +ALS+Q  +  N  V ++    E +    P +E     +E  E
Sbjct: 144  KDAQESSGTQDPDEFQNLALSKQSRDFTNQSVDNQILDLEKISDGTPAEELKAIFEETSE 203

Query: 3316 MSYDYTTTVSEMQSGETYKYSGGTLIMDTFESHSNM---VGSSGGEVLS--FKKLEDTXX 3152
              ++      E+Q  + +K +        F   S +   V S+   +L+   + ++ T  
Sbjct: 204  KGHN--NLEKEVQLSQ-FKKTALMFEESPFTEASELSYSVCSTKSSILTKETESMDPTLS 260

Query: 3151 XXXXXXXXXXXSLPFVAEMSKVHLDVHGRKNVVPAELSRPDVVSAELSMPVVKTELSSAA 2972
                        + F  +M ++ L  +  + V  +ELS            ++    SS+ 
Sbjct: 261  SPVLGESASGEKVRFAKDMPELVLKGYQEEAVPWSELS-----------GLLVDPKSSSV 309

Query: 2971 SQVNNLQAEVNQLERPNFELSKESDIR--SYDLILGDSVREGLYTFYEASLGNSDGLETL 2798
              + ++ AEV+Q  +   EL  E +++  +Y+     S RE ++TFYE    N  G+ T 
Sbjct: 310  IHLKHVPAEVSQEHQFKNELDDEGEVQVSTYNGFFRPSFREEIHTFYEE---NQSGVRTN 366

Query: 2797 SSCGAFQKNRFSLQTKNFSIEDKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKIIFH 2618
               GA       +     +  D   RK PL CYKEGS  ++KD R  K    D  K +  
Sbjct: 367  MLSGA------EVSEGLHNTTDYHERKMPLSCYKEGSCHRRKDFRIGKGFPRDTGKKLTP 420

Query: 2617 QDSTKYLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDMDK 2438
            Q+  + L       G H +  +D    +  Y++LL + R++DC+E+LED+ERKGLLDM+K
Sbjct: 421  QNGDRNLHHPQP-NGLHVSDRNDISGSIDAYNRLLSDGRVTDCVELLEDLERKGLLDMNK 479

Query: 2437 VYHSRFFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQEA 2258
            VYH++FF+ CKSQKAV EAFRF +LI NPT+STFNML+SVCAS QDS+GAFQVLQ V+EA
Sbjct: 480  VYHAKFFNTCKSQKAVNEAFRFIKLISNPTMSTFNMLLSVCASCQDSDGAFQVLQFVKEA 539

Query: 2257 GLKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVAKA 2078
            GLKADCKLYTTLISTCAKSGKVD MF+VFHEMVNAG+EPNVHTYGALIDGCA+AGQVAKA
Sbjct: 540  GLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKA 599

Query: 2077 FGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGALM 1898
            FGAYGI+RSK VKPDRVVFNALITACGQSGAVDRAFDVLAEMR E QPIDPDH+TVGAL+
Sbjct: 600  FGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLAEMRTENQPIDPDHVTVGALI 659

Query: 1897 KACASAGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKGVA 1718
            K C  AGQVDRAREVY MIH+YNIKGT ++YTIAVNSC++ GD +FA  +Y+DM + GV 
Sbjct: 660  KTCTQAGQVDRAREVYMMIHEYNIKGTPDVYTIAVNSCSQTGDLDFALNIYSDMRRNGVV 719

Query: 1717 PDEMFISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKALEF 1538
            PDEMF+SALIDVAGHAG++D A ++++ A+ +GM +G +SYSSLMGACS AK+WQKA E 
Sbjct: 720  PDEMFLSALIDVAGHAGKLDVAFQIIEDAKKQGMQLGNVSYSSLMGACSNAKNWQKAQEL 779

Query: 1537 YEDVKSLNLKPTVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVASEK 1358
            YE++ ++ L PTV MMNALIT+LC+ ++L+KA +VL EMK IG+CP  ITYSILLVA EK
Sbjct: 780  YENIMAIKLHPTVSMMNALITSLCEGNQLQKAVKVLDEMKEIGICPENITYSILLVACEK 839

Query: 1357 KDDIEVGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLDNK 1178
            KD++E+G  LLSEAKK+G+ PNL+MCRCL  MCLRR++K+ + GEPVL FS  + Q++NK
Sbjct: 840  KDELELGFTLLSEAKKEGIVPNLIMCRCLTGMCLRRFEKSSSMGEPVLSFSSGKPQVNNK 899

Query: 1177 WTSSALMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSNLY 998
            WTS ALMVYRE IV+GV PT +  SQVLGCL+LP D  LR RLVEN   +T +SK S++Y
Sbjct: 900  WTSLALMVYRETIVAGVVPTMEVFSQVLGCLQLPRDTSLRERLVENLGVNTSSSKHSSIY 959

Query: 997  SLIDGFGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKGLK 818
            SLIDGFGEYD R+ SLLEEA+SLGV+P +SFKE+ IV+D R   +HTAEVY LT+L+GLK
Sbjct: 960  SLIDGFGEYDSRSFSLLEEAASLGVVPCVSFKESPIVVDTRKLDVHTAEVYFLTILRGLK 1019

Query: 817  HRLAAGAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNESYG 638
            HRLAAGAKLPNV ILLP+EKT+  +  G +TIN+A RI QA+A+LLRRL LTYQGNESYG
Sbjct: 1020 HRLAAGAKLPNVTILLPLEKTKFMSNKGNRTINLAGRIGQAIASLLRRLRLTYQGNESYG 1079

Query: 637  KIRINGVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
            KIRING+ +K+WFQPKL+SPF G P +++SS  RLG+GI  QQR+IR+  LSLE
Sbjct: 1080 KIRINGLALKRWFQPKLDSPFSGKPAELSSSPTRLGKGISDQQRSIRSSKLSLE 1133


>ref|XP_011037246.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Populus euphratica]
          Length = 1104

 Score = 1068 bits (2761), Expect = 0.0
 Identities = 604/1136 (53%), Positives = 761/1136 (66%), Gaps = 33/1136 (2%)
 Frame = -1

Query: 3784 MELSLNSQSISLIACNPTLLPLSPRTVRSQSSEFLS-FCHNL-RPPGSLRSRRKCRSQRF 3611
            MEL+  SQ+++L   + TL  ++ R  R    +F+  F HNL RPP       + R ++ 
Sbjct: 1    MELA-KSQTLALTQIS-TLNSINQRGHR----QFIGCFGHNLMRPPSGAGLLLRYRGRKL 54

Query: 3610 KFHTHAHK-FRFRASLEAQSILXXXXXXXXXXXXXXVYLSYTRKQI-NIKQMTRHL---- 3449
            +   + +K F  +ASL+A S+L               Y  Y    I N K++T       
Sbjct: 55   RVQRNGNKRFVVKASLDANSVLVVVAVSAFSALSLAYYYRYINSNIKNSKKITSSSIQVL 114

Query: 3448 ---TVALSQQISNTMNWVVGSRGSHREDVDKEAPDDESNDSMKELREMSYDYTTTVSEMQ 3278
               + A SQ   + +N + GS+  H   + +EA + ES  S+K+  E S++     + +Q
Sbjct: 115  GSPSFAFSQLGRSIVNHITGSQFLHFGGLHREAHEVESQGSVKKASENSHEIEEKETHVQ 174

Query: 3277 SGETYKYSGGTLIMDTFESHSNMVGSSGGEVLSFKKLEDTXXXXXXXXXXXXXSLPFVAE 3098
              ET    G +L++   ES       SG   ++    +                LP V  
Sbjct: 175  FQETASLHGSSLLIKAVES-------SGANFVAANVCDTVVVEESEVGDARVSPLPSVHS 227

Query: 3097 MSKVHLDV--HGRKNVVPAELSRPDV-VSAELSMPVVKTELSSAASQVNNLQAEVNQLER 2927
             S   L +    +   +  E S  ++   +ELS  V K + ++    V+N          
Sbjct: 228  ESGSALPLIFATQMTELTREKSGEEIEFGSELSESVEKVKSNAVLVPVDN---------- 277

Query: 2926 PNFELSKESDIRSYDLILGDSVREGLYTFYEA------SLGNSDGLETLSSCGAFQKNRF 2765
               E   ++++ +Y+  +  SVRE LYTFY A      S  N    ET S     +  RF
Sbjct: 278  ---ESIDKAELSNYNGAISQSVREDLYTFYGANRSVVKSASNLGLKETSSHASLLKSKRF 334

Query: 2764 S-------LQTKNFSIE------DKFARKGPLRCYKEGSFSQQKDSRGRKELKTDKDKII 2624
            S       L+T++ S +      D   +  PL   + GSF + K+    +E K       
Sbjct: 335  SSLKMNTGLETEDLSSQQPLQAADHVQKIMPLAHNEGGSFHKSKNLPRSRERKHPI---- 390

Query: 2623 FHQDSTKYLLPTSDLKGNHANHMHDSLWQLRVYHQLLKESRLSDCIEMLEDMERKGLLDM 2444
              QDS   L       G  +            Y++LL+E RL++C+++LEDMER+GLLDM
Sbjct: 391  --QDSHSKLRQLPSPNGIPSKVKDHPSEDYNAYNRLLREGRLAECLDLLEDMERRGLLDM 448

Query: 2443 DKVYHSRFFHACKSQKAVKEAFRFTRLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQHVQ 2264
            +KVYH +FF  C+SQKAVKEAFRF +L+ NPTLSTFNMLMSVCASSQ+S GAF+VLQ  +
Sbjct: 449  NKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVCASSQNSAGAFEVLQLAK 508

Query: 2263 EAGLKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGLEPNVHTYGALIDGCAKAGQVA 2084
              GLKADCKLYTTLISTCAKSGKVD MF+VFHEMVNAG+EPNVHTYGALIDGCA+AGQVA
Sbjct: 509  AVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQVA 568

Query: 2083 KAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHITVGA 1904
            KAFGAYGI+RSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM  EAQPIDPDHITVGA
Sbjct: 569  KAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQPIDPDHITVGA 628

Query: 1903 LMKACASAGQVDRAREVYNMIHKYNIKGTAELYTIAVNSCNRNGDWEFACLVYNDMIQKG 1724
            L+KAC +AGQVDRA+EVYNM+HKYNIKGT E+YTIA+NS ++ GDWEFAC VY+DM +KG
Sbjct: 629  LIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSSSQIGDWEFACKVYDDMTRKG 688

Query: 1723 VAPDEMFISALIDVAGHAGRVDAAVEVLQAARTKGMHVGIISYSSLMGACSKAKDWQKAL 1544
            V PDEMF+SALIDVAGHAG++DAA E++Q A+ KG  +GII YSSLMGAC  AK+WQK L
Sbjct: 689  VVPDEMFLSALIDVAGHAGKMDAAFEIIQEAKAKGAQLGIIPYSSLMGACCNAKNWQKGL 748

Query: 1543 EFYEDVKSLNLKPTVPMMNALITALCDADELEKATEVLFEMKSIGLCPNTITYSILLVAS 1364
            E YED+KS+ LKPTV  +NALITALCD D+L KA EVL EMK  GL PNTITYSIL VAS
Sbjct: 749  ELYEDIKSMKLKPTVATLNALITALCDGDQLSKALEVLSEMKVWGLRPNTITYSILSVAS 808

Query: 1363 EKKDDIEVGLLLLSEAKKDGVSPNLVMCRCLIAMCLRRYQKACTSGEPVLPFSPRRLQLD 1184
            E+KDD+E GL+LLS+AKKD V+P L+M +C+I+MCLR+++ ACT GEPVL F+  R Q++
Sbjct: 809  ERKDDLEAGLMLLSQAKKDCVAPTLIMVKCIISMCLRKFENACTLGEPVLSFNSGRAQIE 868

Query: 1183 NKWTSSALMVYREAIVSGVTPTTDELSQVLGCLRLPHDEFLRNRLVENFEFSTDNSKGSN 1004
            NKWTS ALM YR  I +G  PT + +SQVLGCL++P D  L+NRLVEN   +   S+ SN
Sbjct: 869  NKWTSVALMAYRGTIAAGEKPTIELVSQVLGCLQIPCDATLKNRLVENLGVTAVPSRYSN 928

Query: 1003 LYSLIDGFGEYDPRAISLLEEASSLGVIPLISFKENTIVLDVRNFQIHTAEVYLLTVLKG 824
            L SL+DGFGEYDPRA SLLEEA+SLG++P +SFKE+ I +D +  QIH AEVY LT+LKG
Sbjct: 929  LCSLVDGFGEYDPRAFSLLEEAASLGIVPCVSFKESPITMDAKQLQIHIAEVYFLTILKG 988

Query: 823  LKHRLAAGAKLPNVNILLPVEKTQIQTPTGEKTINIASRISQAVAALLRRLGLTYQGNES 644
            LKHRLAAGAKLPN+ ILLPVEK Q  T  GEKTIN+A RISQAVA+LLRRLGL YQGNES
Sbjct: 989  LKHRLAAGAKLPNITILLPVEKAQAITLEGEKTINVAGRISQAVASLLRRLGLPYQGNES 1048

Query: 643  YGKIRINGVFIKKWFQPKLNSPFRGTPTDMNSSQARLGRGIIHQQRNIRTGNLSLE 476
            YGKIRING+ +++W QPKL+SPF G P + ++S +RLG+GI  QQRNIRTG+ SLE
Sbjct: 1049 YGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLGKGISFQQRNIRTGDFSLE 1104