BLASTX nr result

ID: Forsythia22_contig00017478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00017478
         (310 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087201.1| PREDICTED: 30S ribosomal protein 2, chloropl...    72   1e-10
emb|CDP07719.1| unnamed protein product [Coffea canephora]             58   3e-06
ref|XP_012849752.1| PREDICTED: 30S ribosomal protein 2, chloropl...    56   8e-06

>ref|XP_011087201.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Sesamum indicum]
          Length = 249

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 39/62 (62%), Positives = 43/62 (69%)
 Frame = -1

Query: 187 QKPTKTLTTHLSELNFRSLKPQIFPLKFTHKSPFTVNAGRLNAVAEDTSVSTADPSSEAA 8
           Q P     THL +L+F  LKPQI PLKFTH +P      R NAVAEDTSV+TADPSS AA
Sbjct: 18  QNPRNPFKTHLPKLHFYPLKPQIAPLKFTHSNP-----RRFNAVAEDTSVATADPSSVAA 72

Query: 7   RR 2
           RR
Sbjct: 73  RR 74


>emb|CDP07719.1| unnamed protein product [Coffea canephora]
          Length = 260

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/67 (56%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
 Frame = -1

Query: 178 TKTLTTHLSELNFRSLKPQIFPLKFTHKSPFTV---NAGRLNAVAED----TSVST-ADP 23
           +K + TH S LNF  LKP   PLKFT  SP T       RLNAVAE+     SV+T ADP
Sbjct: 19  SKLIKTHFSRLNFNGLKPLKTPLKFTFHSPQTTREQQPTRLNAVAEEETETASVATAADP 78

Query: 22  SSEAARR 2
           SSEAARR
Sbjct: 79  SSEAARR 85


>ref|XP_012849752.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Erythranthe
           guttatus] gi|604314200|gb|EYU27087.1| hypothetical
           protein MIMGU_mgv1a012437mg [Erythranthe guttata]
          Length = 250

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/62 (51%), Positives = 35/62 (56%)
 Frame = -1

Query: 187 QKPTKTLTTHLSELNFRSLKPQIFPLKFTHKSPFTVNAGRLNAVAEDTSVSTADPSSEAA 8
           Q P K   T L  L+    KPQ  PL+F   S    N  RLNAVAED +  TADPSS AA
Sbjct: 18  QNPNKLFKTRLPNLHLHPHKPQFAPLRFARSS----NPSRLNAVAEDATQVTADPSSAAA 73

Query: 7   RR 2
           RR
Sbjct: 74  RR 75


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