BLASTX nr result
ID: Forsythia22_contig00017435
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00017435
(235 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 123 6e-26
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 121 2e-25
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 119 1e-24
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera] 109 6e-22
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 105 2e-20
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 100 7e-19
emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera] 93 6e-17
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group] 91 3e-16
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 91 3e-16
gb|AAN64998.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 89 9e-16
emb|CAN62130.1| hypothetical protein VITISV_019730 [Vitis vinifera] 89 2e-15
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] 88 2e-15
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc... 88 3e-15
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 87 3e-15
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc... 87 4e-15
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc... 87 4e-15
gb|AAX96109.1| retrotransposon protein, putative, Ty1-copia sub-... 87 6e-15
gb|AAX95374.1| Integrase core domain, putative [Oryza sativa Jap... 87 6e-15
gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap... 86 7e-15
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 86 7e-15
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 123 bits (308), Expect = 6e-26
Identities = 58/72 (80%), Positives = 63/72 (87%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TLKEMMNAML+SSGLPQNMW E VLSANYLLNK+PRK+E T YELWKGR PSYK+L
Sbjct: 623 KNRTLKEMMNAMLISSGLPQNMWGEAVLSANYLLNKIPRKQENTTPYELWKGRSPSYKFL 682
Query: 183 QV*GCLAKVAVP 218
+V GCLAKV VP
Sbjct: 683 RVWGCLAKVVVP 694
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 121 bits (303), Expect = 2e-25
Identities = 57/72 (79%), Positives = 63/72 (87%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TLKEMMNAML+SS LPQNMW E +L+ANYLLNKVP+KK E T YELWKGRKPSY YL
Sbjct: 634 KNRTLKEMMNAMLISSSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYL 693
Query: 183 QV*GCLAKVAVP 218
++ GCLAKVAVP
Sbjct: 694 RMWGCLAKVAVP 705
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 119 bits (297), Expect = 1e-24
Identities = 56/72 (77%), Positives = 62/72 (86%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TLKEMMNAML+S LPQNMW E +L+ANYLLNKVP+KK E T YELWKGRKPSY YL
Sbjct: 634 KNRTLKEMMNAMLISFSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYL 693
Query: 183 QV*GCLAKVAVP 218
++ GCLAKVAVP
Sbjct: 694 RMWGCLAKVAVP 705
>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
Length = 839
Score = 109 bits (273), Expect = 6e-22
Identities = 49/71 (69%), Positives = 60/71 (84%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TLKEMMNAML+SSGLPQN+W+E +L AN++LNK+P K ++ TSYELWKG KPSYKYL
Sbjct: 290 KNLTLKEMMNAMLISSGLPQNLWREAILFANHILNKIPHKNKDVTSYELWKGHKPSYKYL 349
Query: 183 QV*GCLAKVAV 215
+V CL KV +
Sbjct: 350 KVWECLTKVVL 360
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 105 bits (261), Expect = 2e-20
Identities = 47/72 (65%), Positives = 60/72 (83%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TLKEMMNA+++SSG P+N+W ET+L+AN +LN+VPR K ++ YELWKGRKP+ KY
Sbjct: 641 KNRTLKEMMNALIISSGSPRNLWGETILTANKILNRVPRSKTQSIPYELWKGRKPNLKYF 700
Query: 183 QV*GCLAKVAVP 218
+V GCLAKV VP
Sbjct: 701 KVWGCLAKVEVP 712
>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 99.8 bits (247), Expect = 7e-19
Identities = 47/72 (65%), Positives = 56/72 (77%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TLKEMMNAMLLSSGL NMW E VLSA ++LN++P K+ + T YELWKG P+ YL
Sbjct: 631 KNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRLDKTPYELWKGHAPNLSYL 690
Query: 183 QV*GCLAKVAVP 218
+V GCLAKV +P
Sbjct: 691 KVWGCLAKVPLP 702
>emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]
Length = 565
Score = 93.2 bits (230), Expect = 6e-17
Identities = 44/72 (61%), Positives = 54/72 (75%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TLKEMMNAML+SSG P N+W E +LSA ++ N++P KK T YELWKG P+ YL
Sbjct: 490 KNRTLKEMMNAMLVSSGTPLNLWGEAILSACHIQNRIPYKKTGKTPYELWKGYAPNIAYL 549
Query: 183 QV*GCLAKVAVP 218
+V GCLAKV +P
Sbjct: 550 KVWGCLAKVLLP 561
>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
Length = 1314
Score = 90.9 bits (224), Expect = 3e-16
Identities = 39/72 (54%), Positives = 56/72 (77%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KNCTL +++NAML ++GLP+ W E +L++N++LN+VP + ++ T YE+W GRKPS YL
Sbjct: 569 KNCTLTDLVNAMLDTAGLPKAWWGEVLLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYL 628
Query: 183 QV*GCLAKVAVP 218
+ GCLAKV VP
Sbjct: 629 RTWGCLAKVNVP 640
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 90.9 bits (224), Expect = 3e-16
Identities = 42/73 (57%), Positives = 56/73 (76%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TLKEMMNAML+SS P N+W E++L+A +L N++P +K T YELWKG +P+ KYL
Sbjct: 596 KNRTLKEMMNAMLISSNAPDNLWGESLLTACFLQNRIPHRKTGKTPYELWKGYQPNLKYL 655
Query: 183 QV*GCLAKVAVPN 221
+V G LAKV +P+
Sbjct: 656 RVWGSLAKVMLPD 668
>gb|AAN64998.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108707933|gb|ABF95728.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1040
Score = 89.4 bits (220), Expect = 9e-16
Identities = 39/72 (54%), Positives = 56/72 (77%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL +++NAML ++GLP+ W+E +L++N++LN+VP K ++ T YE+W GRKPS YL
Sbjct: 550 KNRTLTDLVNAMLDTAGLPKAWWEEALLTSNHVLNRVPNKNKDKTPYEIWTGRKPSLSYL 609
Query: 183 QV*GCLAKVAVP 218
+ GCLAKV VP
Sbjct: 610 RTWGCLAKVNVP 621
>emb|CAN62130.1| hypothetical protein VITISV_019730 [Vitis vinifera]
Length = 438
Score = 88.6 bits (218), Expect = 2e-15
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TLKEMMN ML+SSG P N+W ET+LSA ++ N +P K+ T YELWKG P+ YL
Sbjct: 94 KNRTLKEMMNEMLVSSGAPLNLWGETILSARHIQNTIPYKRIGKTPYELWKGYAPNIAYL 153
Query: 183 QV*GCLAKV 209
+V GCLAKV
Sbjct: 154 RVWGCLAKV 162
>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 88.2 bits (217), Expect = 2e-15
Identities = 39/72 (54%), Positives = 55/72 (76%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL +++NAML ++GLP+ W E +L++NY+LN+VP + ++ T YE+W GRKPS YL
Sbjct: 597 KNRTLTDLVNAMLDTAGLPKAWWGEALLTSNYVLNRVPNRNKDKTPYEIWIGRKPSLSYL 656
Query: 183 QV*GCLAKVAVP 218
+ GCLAKV VP
Sbjct: 657 RTWGCLAKVNVP 668
>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 87.8 bits (216), Expect = 3e-15
Identities = 38/72 (52%), Positives = 56/72 (77%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL +++NAML ++GLP+ W+E +L++N++LN+VP + ++ T YE+W GRKPS YL
Sbjct: 597 KNRTLTDLVNAMLDTAGLPKAWWREALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYL 656
Query: 183 QV*GCLAKVAVP 218
+ GCLAKV VP
Sbjct: 657 RTWGCLAKVNVP 668
>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 87.4 bits (215), Expect = 3e-15
Identities = 38/72 (52%), Positives = 56/72 (77%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL +++NAML ++GLP+ W E +L++N++LN+VP + ++ T YE+W GRKPS YL
Sbjct: 597 KNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYL 656
Query: 183 QV*GCLAKVAVP 218
++ GCLAKV VP
Sbjct: 657 RIWGCLAKVNVP 668
>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 87.0 bits (214), Expect = 4e-15
Identities = 38/72 (52%), Positives = 55/72 (76%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL +++NAML ++GLP+ W E +L++N++LN+VP + ++ T YE+W GRKPS YL
Sbjct: 684 KNRTLTDLVNAMLDTAGLPKTWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYL 743
Query: 183 QV*GCLAKVAVP 218
+ GCLAKV VP
Sbjct: 744 RTWGCLAKVNVP 755
>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1075
Score = 87.0 bits (214), Expect = 4e-15
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL ++NAML +SGLP MW E + +A ++LN+VP K E T YELWKGRKP+ +L
Sbjct: 500 KNRTLTNLVNAMLSNSGLPNYMWGEALYTACFVLNRVPAKGTEVTPYELWKGRKPNLNFL 559
Query: 183 QV*GCLAKVAVP 218
+V GCLAKV +P
Sbjct: 560 KVWGCLAKVNIP 571
>gb|AAX96109.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1350
Score = 86.7 bits (213), Expect = 6e-15
Identities = 38/72 (52%), Positives = 55/72 (76%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL +++NAML ++GLP+ W E +L++NY+LN+VP + ++ T YE+W GRKPS YL
Sbjct: 597 KNRTLTDLVNAMLDTAGLPKAWWGEALLTSNYVLNRVPNRNKDKTPYEIWIGRKPSLSYL 656
Query: 183 QV*GCLAKVAVP 218
+ GCLA+V VP
Sbjct: 657 RTWGCLAQVNVP 668
>gb|AAX95374.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|108864298|gb|ABA92908.2| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1393
Score = 86.7 bits (213), Expect = 6e-15
Identities = 38/72 (52%), Positives = 55/72 (76%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL +++NAML ++GLP+ W E +L++NY+LN+VP + ++ T YE+W GRKPS YL
Sbjct: 597 KNRTLTDLVNAMLDTAGLPKAWWGEALLTSNYVLNRVPNRNKDKTPYEIWIGRKPSLSYL 656
Query: 183 QV*GCLAKVAVP 218
+ GCLA+V VP
Sbjct: 657 RTWGCLAQVNVP 668
>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1274
Score = 86.3 bits (212), Expect = 7e-15
Identities = 38/72 (52%), Positives = 55/72 (76%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL +++NAML ++GLP+ W E +L++N++LN+VP + ++ T YE+W GRKPS YL
Sbjct: 597 KNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYL 656
Query: 183 QV*GCLAKVAVP 218
+ GCLAKV VP
Sbjct: 657 RTWGCLAKVNVP 668
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 86.3 bits (212), Expect = 7e-15
Identities = 38/72 (52%), Positives = 55/72 (76%)
Frame = +3
Query: 3 KNCTLKEMMNAMLLSSGLPQNMWKETVLSANYLLNKVPRKKEENTSYELWKGRKPSYKYL 182
KN TL +++NAML ++GLP+ W E +L++N++LN+VP + ++ T YE+W GRKPS YL
Sbjct: 597 KNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYL 656
Query: 183 QV*GCLAKVAVP 218
+ GCLAKV VP
Sbjct: 657 RTWGCLAKVNVP 668