BLASTX nr result

ID: Forsythia22_contig00016718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00016718
         (556 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK71532.1| hypothetical chloroplast RF2 [Ochna mossambicensis]     42   2e-06
gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia]      41   5e-06

>gb|AEK71532.1| hypothetical chloroplast RF2 [Ochna mossambicensis]
          Length = 2264

 Score = 41.6 bits (96), Expect(2) = 2e-06
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +1

Query: 424  QTRRPRSIHKRWFIKNTQGKHFDSTI 501
            QT  P SI+KRWFIKNTQ KHF+  I
Sbjct: 2178 QTNPPTSIYKRWFIKNTQEKHFELLI 2203



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
 Frame = +2

Query: 341  FFISKD---LSVFSHRELFAHEKISKRLLTSK 427
            FF+ KD   +SVFSH+E FA E++SK LLTS+
Sbjct: 2147 FFLFKDPPFVSVFSHQEFFADEEMSKGLLTSQ 2178


>gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia]
          Length = 2307

 Score = 40.8 bits (94), Expect(2) = 5e-06
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +1

Query: 424  QTRRPRSIHKRWFIKNTQGKHFDSTI 501
            QT  P SI+KRWFIKNTQ KHF+  I
Sbjct: 2219 QTDPPTSIYKRWFIKNTQEKHFELLI 2244



 Score = 35.8 bits (81), Expect(2) = 5e-06
 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 9/38 (23%)
 Frame = +2

Query: 341  FFISKD---------LSVFSHRELFAHEKISKRLLTSK 427
            FF+ KD         +SVFSHRE FA E++SK LLTS+
Sbjct: 2182 FFLFKDQPFVSVFSHVSVFSHREFFADEEMSKGLLTSQ 2219


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