BLASTX nr result
ID: Forsythia22_contig00016359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00016359
(1595 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein... 649 0.0
ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe... 597 e-168
ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein... 597 e-167
ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein... 596 e-167
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 593 e-167
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein... 591 e-166
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein... 590 e-165
emb|CDO99584.1| unnamed protein product [Coffea canephora] 584 e-164
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein... 583 e-163
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein... 582 e-163
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 579 e-162
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein... 576 e-161
ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 576 e-161
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun... 576 e-161
ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein... 575 e-161
gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sin... 575 e-161
ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein... 574 e-161
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ... 573 e-160
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr... 573 e-160
ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein... 572 e-160
>ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Sesamum
indicum]
Length = 627
Score = 649 bits (1674), Expect = 0.0
Identities = 329/403 (81%), Positives = 352/403 (87%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
MADSDD+KTSESK PT+EDI+EITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI
Sbjct: 227 MADSDDDKTSESKVPTYEDIREITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 286
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLC+VRNVDAT+PD+QYKLDNKTTYKYLNVVWGNE+SAARWQMAMISDS P KEEF+QW
Sbjct: 287 YRLCVVRNVDATDPDKQYKLDNKTTYKYLNVVWGNETSAARWQMAMISDSPPTKEEFDQW 346
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
VREVERS GHM +KQEVLEK++AIQKTN+FVYSAATVKQMLQEKKSATWRPLNVAAEKDR
Sbjct: 347 VREVERSGGHMPTKQEVLEKKEAIQKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 406
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRR LEVAK DE EVER+KARLQELE SRQ Q DSKA++LAEMN+RNRVENF+NASE
Sbjct: 407 LRRALEVAKENEDEAEVERLKARLQELEASRQPQEKDSKAVKLAEMNRRNRVENFRNASE 466
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGGVE 599
KPVNTSLKAGEAGYDPFSRRWTRSRNYY++NS G EAAGETNGDASA L NGG
Sbjct: 467 LKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANSNGGEAAGETNGDASAAL--PGSNGGGR 524
Query: 598 XXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHGA 419
GKLVDT APVDQGTESN+LHNFELPISLA LQKFGG GA
Sbjct: 525 VSAEAGVAATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLAALQKFGGPQGA 584
Query: 418 QAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
QAGFMARKQR+EAT+G +PENDGRRHALTLTVSDYKRRRGLL
Sbjct: 585 QAGFMARKQRIEATLGVKVPENDGRRHALTLTVSDYKRRRGLL 627
>ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe guttatus]
Length = 623
Score = 597 bits (1539), Expect = e-168
Identities = 317/443 (71%), Positives = 346/443 (78%), Gaps = 8/443 (1%)
Frame = -2
Query: 1594 KRRSFA-----TTTFNXXXXXXXXXXXXXXXXXXXXGMADSDDEKTSESKTPTFEDIKEI 1430
KRRSFA TT + G+ DSDD+K S SK PTFEDIKEI
Sbjct: 196 KRRSFAAAAATTTALSSPSRSDSGSHSDDGDSTGDGGLGDSDDDKVS-SKVPTFEDIKEI 254
Query: 1429 TIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNK 1250
TIRRSKL+KWFMEPFFDELIVGCFVRVGIGKSRSG IYRLC+VRNVDAT+PDR+YKLDNK
Sbjct: 255 TIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSIYRLCVVRNVDATDPDRKYKLDNK 314
Query: 1249 TTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDA 1070
TT K+LNVVWG+ESSAARWQMAM+SDS+P +EEF+QWV+EVER+ GHM +KQEV+EKRDA
Sbjct: 315 TTSKWLNVVWGSESSAARWQMAMVSDSAPQREEFDQWVKEVERNGGHMPTKQEVMEKRDA 374
Query: 1069 IQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRELEVAKMRYDEVEVERIKAR 890
IQ+TNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRR LEVAK D+ EVERIKAR
Sbjct: 375 IQRTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRSLEVAKENEDDAEVERIKAR 434
Query: 889 LQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASEKKPVNTSLKAGEAGYDPFSRRWT 710
LQELE SRQ +SKA++LAEMN++NRVENFKNASE KPV LKAGEAGYDPFSRRWT
Sbjct: 435 LQELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKPVTIGLKAGEAGYDPFSRRWT 494
Query: 709 RSRNYYLSNSGGD---EAAGETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXX 539
RSRNYY+ NSGG E A ETNG A L
Sbjct: 495 RSRNYYVGNSGGGVEAEVAVETNGGGGAALP--------------GLAATEAALVAAAGA 540
Query: 538 GKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHGAQAGFMARKQRMEATVGCTIP 359
GKLVDT APVDQGTESNLLHNFELPISLAVLQKFGG G QAGFMARKQR+EAT+G +P
Sbjct: 541 GKLVDTMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGTQAGFMARKQRIEATLGVKVP 600
Query: 358 ENDGRRHALTLTVSDYKRRRGLL 290
ENDGRRHALTL+VSDYKRRRGLL
Sbjct: 601 ENDGRRHALTLSVSDYKRRRGLL 623
>ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nicotiana
tomentosiformis]
Length = 654
Score = 597 bits (1538), Expect = e-167
Identities = 301/403 (74%), Positives = 343/403 (85%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
M DSDD+K+ ES+ PTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGPI
Sbjct: 254 MDDSDDDKSPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPI 313
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLC+VRNVDAT+P+RQYKL+NKTT+K+LN+VWGN+SSAARWQMAM+SDS PL++EF+QW
Sbjct: 314 YRLCIVRNVDATDPNRQYKLENKTTFKFLNLVWGNDSSAARWQMAMVSDSPPLRDEFDQW 373
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
V+EVERS G M SKQ+VLEK++AIQK+NTFVYSA TVKQMLQ+KKSATWRPLNVAAEKDR
Sbjct: 374 VKEVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKDR 433
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRE+EVAKM+ DE EVE+IKARLQELE SR+ Q D KA RLAEMN++NRVENFKNASE
Sbjct: 434 LRREMEVAKMKNDEAEVEKIKARLQELEASRKAQEKDDKARRLAEMNRKNRVENFKNASE 493
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGGVE 599
+PVN LKAGEAGYDPFSRRWTRS NY+ + S + A G +NG+A+A L V + N G
Sbjct: 494 LRPVNQLLKAGEAGYDPFSRRWTRSTNYF-AKSANEAAEGASNGEAAAALAVVD-NNGAG 551
Query: 598 XXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHGA 419
GKLVDT APVD GTESN LH+F+LPISLAVLQKFGG G+
Sbjct: 552 GIADGGMEATAAALQAAAGAGKLVDTIAPVDLGTESNTLHDFDLPISLAVLQKFGGPQGS 611
Query: 418 QAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
QAGFMARKQR+EATVGC +PENDGRRHALTL+VSDYKRRRGLL
Sbjct: 612 QAGFMARKQRIEATVGCRVPENDGRRHALTLSVSDYKRRRGLL 654
>ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nicotiana
sylvestris]
Length = 654
Score = 596 bits (1537), Expect = e-167
Identities = 300/403 (74%), Positives = 343/403 (85%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
M DSDD+K+ ES+ PTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGPI
Sbjct: 254 MDDSDDDKSPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPI 313
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLC+VRNVDAT+P+RQYKL+NKTT+K+LN++WGN+SSAARWQMAM+SDS PL++EF+QW
Sbjct: 314 YRLCIVRNVDATDPNRQYKLENKTTFKFLNLIWGNDSSAARWQMAMVSDSPPLRDEFDQW 373
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
V+EVERS G M SKQ+VLEK++AIQK+NTFVYSA TVKQMLQ+KKSATWRPLNVAAEKDR
Sbjct: 374 VKEVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKDR 433
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRE+EVAKM+ DE EVERIKARLQELE SR+ Q D KA RLAEMN++NRVENFKNASE
Sbjct: 434 LRREMEVAKMKNDEAEVERIKARLQELEASRKAQEKDDKARRLAEMNRKNRVENFKNASE 493
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGGVE 599
+PVN LKAGEAGYDPFSRRWTRS NY+ + S + A G +NG+A+A L V + N G
Sbjct: 494 LRPVNQLLKAGEAGYDPFSRRWTRSTNYF-AKSANEAAVGASNGEAAAALAVVD-NNGAG 551
Query: 598 XXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHGA 419
GKLVDT APVD GTESN LH+F+LPISLAVLQKFGG G+
Sbjct: 552 GIADGGMAATAAALQAAAGAGKLVDTIAPVDLGTESNTLHDFDLPISLAVLQKFGGPQGS 611
Query: 418 QAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
QAGF+ARKQR+EATVGC +PENDGRRHALTL+VSDYKRRRGLL
Sbjct: 612 QAGFIARKQRIEATVGCRVPENDGRRHALTLSVSDYKRRRGLL 654
>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated
protein RTF1, putative [Ricinus communis]
Length = 660
Score = 593 bits (1530), Expect = e-167
Identities = 297/404 (73%), Positives = 339/404 (83%), Gaps = 1/404 (0%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
MADSDD+ S+ PTF+DI+EITIRRSKLAKWFMEP+F+ELIVGCFVRVGIG+S+SGPI
Sbjct: 257 MADSDDDGEPGSQGPTFDDIREITIRRSKLAKWFMEPWFEELIVGCFVRVGIGRSKSGPI 316
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLC+VRNVDA +PDR YKL+NKTTYKYLNV+WGNESSAARWQMAMISDS+P ++E++QW
Sbjct: 317 YRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQMAMISDSAPTEDEYKQW 376
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
VREVERS G M +KQ++LEK++AI+K+NTFVYSAATVKQMLQEKKSA+ RPLNVAAEKDR
Sbjct: 377 VREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSRPLNVAAEKDR 436
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRELEVA+ + D+ EVERI+AR+QELE SRQTQG D+KAIRLAEMN++NR ENF+NASE
Sbjct: 437 LRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRLAEMNRKNRAENFRNASE 496
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVAN-INGGV 602
KPVNTSLKAGEAGYDPFSRRWTRSRNYY+S G +AA TN +AS + VAN
Sbjct: 497 LKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATNNEASGTVAVANKTESAA 556
Query: 601 EXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHG 422
GKLVDT APVDQGTESN LHNFELPISL LQKFGGA G
Sbjct: 557 GVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHNFELPISLTALQKFGGAQG 616
Query: 421 AQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
AQAGFMARKQR+EAT+GC + END +RH LTLTVSDYKRRRGLL
Sbjct: 617 AQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGLL 660
>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
tuberosum]
Length = 652
Score = 591 bits (1524), Expect = e-166
Identities = 299/405 (73%), Positives = 344/405 (84%), Gaps = 2/405 (0%)
Frame = -2
Query: 1498 MADSDDEKTS-ESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 1322
M DSDD+K+S ES+ PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGP
Sbjct: 249 MDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGP 308
Query: 1321 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQ 1142
IYRLC+VRNVD+++P+RQYKL+NKTT K+LNVVWGNE+SAARWQMAM+SDS PL++EF+Q
Sbjct: 309 IYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSDSPPLRDEFDQ 368
Query: 1141 WVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKD 962
WVREVERS G M SKQ+VLEK++AIQK+NTFVYSA TVKQMLQ+KKSATWRPLNVAAEKD
Sbjct: 369 WVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKD 428
Query: 961 RLRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNAS 782
RLRR++EVAKM+ DE EVERIKARLQEL++SR+ Q D KA RLAEMN++NRVENFKNAS
Sbjct: 429 RLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRLAEMNRKNRVENFKNAS 488
Query: 781 EKKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGD-ASAVLEVANINGG 605
E +PVN LKAG+AGYDPFSRRWTRS NY+ + +EA G +NG+ A+A A N G
Sbjct: 489 ELRPVNQLLKAGQAGYDPFSRRWTRSTNYF-AKGANEEAEGASNGEVAAAAALAAEDNNG 547
Query: 604 VEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAH 425
GKLVDT APVDQGTESN LH+F+LPISLAVLQKFGG+
Sbjct: 548 ASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQ 607
Query: 424 GAQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
G QAGFMARKQR+EATVGC++PENDGRRHALTL+VSDYKRRRGLL
Sbjct: 608 GGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652
>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
lycopersicum]
Length = 645
Score = 590 bits (1520), Expect = e-165
Identities = 302/405 (74%), Positives = 342/405 (84%), Gaps = 2/405 (0%)
Frame = -2
Query: 1498 MADSDDEKTS-ESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 1322
M DSDD+K+S ES+ PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGP
Sbjct: 249 MDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGP 308
Query: 1321 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQ 1142
IYRLC+VRNVDA++P+RQYKL+NKTT K+LNVVWGNE+SAARWQMAMISDS PL++EF+Q
Sbjct: 309 IYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISDSPPLRDEFDQ 368
Query: 1141 WVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKD 962
WVREVERS G M SKQ+VLEK++AIQK+NTFVYSA TVKQMLQ+KKSATWRPLNVAAEKD
Sbjct: 369 WVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKD 428
Query: 961 RLRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNAS 782
RLRR++EVAKM+ DE EVERIKARLQELE+SR+ Q D KA RLAEMN++NRVENFKNAS
Sbjct: 429 RLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEMNRKNRVENFKNAS 488
Query: 781 EKKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEV-ANINGG 605
E +PVN LKAGEAGYDPFSRRWTRS NY+ A G +NG+A+A + A N G
Sbjct: 489 ELRPVNQLLKAGEAGYDPFSRRWTRSTNYF--------AKGASNGEAAAAAALAAEDNNG 540
Query: 604 VEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAH 425
GKLVDT APVDQGTESN LH+F+LPISLAVLQKFGG+
Sbjct: 541 AGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQ 600
Query: 424 GAQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
G QAGFMARKQR+EATVGC++PENDGRRHALTL+VSDYKRRRGLL
Sbjct: 601 GGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645
>emb|CDO99584.1| unnamed protein product [Coffea canephora]
Length = 631
Score = 584 bits (1505), Expect = e-164
Identities = 309/436 (70%), Positives = 339/436 (77%), Gaps = 1/436 (0%)
Frame = -2
Query: 1594 KRRSFATTTFNXXXXXXXXXXXXXXXXXXXXGMADSDDEKTS-ESKTPTFEDIKEITIRR 1418
KRR F T GMADSD++KTS ESK PT+EDIKEITIRR
Sbjct: 202 KRRPFTAATIGSPTRSGSASHSDEEESTGDGGMADSDEDKTSAESKWPTYEDIKEITIRR 261
Query: 1417 SKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYK 1238
SKLAKWFMEPFF++LIVGCFVRVGIGK+R GPIYRLC+VRNVD ++PDR YKLDNKTTYK
Sbjct: 262 SKLAKWFMEPFFEDLIVGCFVRVGIGKNRYGPIYRLCVVRNVDGSDPDRLYKLDNKTTYK 321
Query: 1237 YLNVVWGNESSAARWQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKT 1058
YLNVVWGNE+SAARWQMAMISDS P KEE++QWVREVERS G M SK EVLEK++AIQKT
Sbjct: 322 YLNVVWGNENSAARWQMAMISDSPPAKEEYDQWVREVERSGGRMPSKLEVLEKKEAIQKT 381
Query: 1057 NTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRELEVAKMRYDEVEVERIKARLQEL 878
N+FVYSA TVKQMLQEKKSATWRPLNVAAEKDRLR E+EVAK+ DE+EVERIKARLQEL
Sbjct: 382 NSFVYSAETVKQMLQEKKSATWRPLNVAAEKDRLRTEMEVAKINNDELEVERIKARLQEL 441
Query: 877 EESRQTQGNDSKAIRLAEMNKRNRVENFKNASEKKPVNTSLKAGEAGYDPFSRRWTRSRN 698
E SRQ D KAIRLAEMN++NRVENFKNAS KPVN SLKAGEAGYDPFSRRWTRSRN
Sbjct: 442 EASRQAHEMDKKAIRLAEMNRKNRVENFKNASGLKPVNASLKAGEAGYDPFSRRWTRSRN 501
Query: 697 YYLSNSGGDEAAGETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXGKLVDTR 518
YY+ N EA +G+A+A V N NG GKLVDT
Sbjct: 502 YYVKNPIDGEATA-ADGEATAASAVNNRNG-----TAVVSTEMGKAATATADDGKLVDTS 555
Query: 517 APVDQGTESNLLHNFELPISLAVLQKFGGAHGAQAGFMARKQRMEATVGCTIPENDGRRH 338
APVDQG ESN+LH F+L I+L L+ FGGA GAQAGFMARKQR+EATVGC +PENDGRRH
Sbjct: 556 APVDQGRESNMLHGFKLEINLDPLENFGGAKGAQAGFMARKQRIEATVGCRVPENDGRRH 615
Query: 337 ALTLTVSDYKRRRGLL 290
ALTLTVSDYKRR GLL
Sbjct: 616 ALTLTVSDYKRRMGLL 631
>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
vinifera]
Length = 658
Score = 583 bits (1502), Expect = e-163
Identities = 296/404 (73%), Positives = 329/404 (81%), Gaps = 1/404 (0%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
M DSDD++ S PTFEDIK ITIRRSKLAKWFMEPFF+ELIVGCFVRVGIGKSRSGPI
Sbjct: 255 MVDSDDDRGIGSDVPTFEDIKSITIRRSKLAKWFMEPFFEELIVGCFVRVGIGKSRSGPI 314
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLCMVRNVDA++PDR Y+L+NKTTYKYLN VWGNE+S+ARWQMAM+SDS PL EEF QW
Sbjct: 315 YRLCMVRNVDASDPDRHYQLENKTTYKYLNCVWGNENSSARWQMAMVSDSGPLMEEFNQW 374
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
V+EVERS ML+KQ++LEKR+AIQKTN FVYSAAT KQMLQEKKS + RPLN+ AEKDR
Sbjct: 375 VKEVERSGSRMLTKQDILEKREAIQKTNMFVYSAATGKQMLQEKKSVSSRPLNIVAEKDR 434
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRE+EVA ++D+ EVERI RLQ+LE SR+++ D+KAIRLAEMN++NR ENFKNASE
Sbjct: 435 LRREMEVALSKHDQAEVERINTRLQQLEASRRSKEKDAKAIRLAEMNRKNRAENFKNASE 494
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSN-SGGDEAAGETNGDASAVLEVANINGGV 602
K VNTSLKAGEAGYDPFSRRWTRSRNYY+S GGDEAA NG+A A A NG
Sbjct: 495 SKRVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGGDEAAAVANGEAPAAFVGAGSNGTG 554
Query: 601 EXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHG 422
GKLVDT APVDQGTESN LH+FELPISLA LQKFGG G
Sbjct: 555 GKGAEVGVAATAAALEAAADAGKLVDTSAPVDQGTESNTLHDFELPISLAGLQKFGGPQG 614
Query: 421 AQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
A AGFMARKQR+EATVGC +PENDGRRHALTLTV DYKRRRGLL
Sbjct: 615 ALAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 658
>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
JCGZ_21409 [Jatropha curcas]
Length = 658
Score = 582 bits (1499), Expect = e-163
Identities = 290/404 (71%), Positives = 341/404 (84%), Gaps = 1/404 (0%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
MADSD+++ S+ T++DI+E+TIRRSKLAKW MEP+F+ELIVGCFVRVGIG+S+SGPI
Sbjct: 257 MADSDEDREPGSEGLTYDDIREVTIRRSKLAKWLMEPWFEELIVGCFVRVGIGRSKSGPI 316
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLC+VRNVDA +PDR YKL+NKTTYKYLNV+WGNESSAARWQMAM+SDS+P ++E++QW
Sbjct: 317 YRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQMAMVSDSAPTEDEYKQW 376
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
VREVERS G M +KQ++LEK++AI+K+NTFVYSAATVKQMLQEKKSA+ RPLNVAAEKDR
Sbjct: 377 VREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQEKKSASTRPLNVAAEKDR 436
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRELEVA+M+ D+ EVERI+AR+QELE SRQ Q D+KAIRLAEMN++NR ENF+NASE
Sbjct: 437 LRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIRLAEMNRKNRAENFRNASE 496
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGGVE 599
KPVNTSLKAGEAGYDPFSRRWTRSRNYY+S GG + A E N + +A VA+ NG
Sbjct: 497 LKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEANNNGTAA--VAHSNGAAT 554
Query: 598 -XXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHG 422
GKLVDT APVDQGTESN LH+F+LPISL L+KFGGA G
Sbjct: 555 GTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHDFDLPISLTALEKFGGAKG 614
Query: 421 AQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
A+AGFMARKQ++EATVGC +PENDGRRHALTLTVSDYKRRRGLL
Sbjct: 615 AKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 658
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
[Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
RNA polymerase-associated protein RTF1 homolog isoform X2
[Glycine max]
Length = 656
Score = 579 bits (1492), Expect = e-162
Identities = 296/405 (73%), Positives = 337/405 (83%), Gaps = 2/405 (0%)
Frame = -2
Query: 1498 MADSDDEKT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 1322
+ DSDD++ + S+ P+F+D+KEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GP
Sbjct: 254 IVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGP 313
Query: 1321 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQ 1142
IYRLCMV+NVDA+EPDRQYKL+NKTTYKYLNVVWGNESSAARWQMAM+SDS+PL+EEF+Q
Sbjct: 314 IYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDSAPLEEEFKQ 373
Query: 1141 WVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKD 962
WV+EV+RS G M SKQ+VLEK+ AIQK TFVYSAATVKQMLQEKKSA+ RPLNVAAEKD
Sbjct: 374 WVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKD 433
Query: 961 RLRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNAS 782
RLRRELE+A+ +YDE EVERIK RL ELE SRQ + D+KA++LAEMN++NR ENFKNAS
Sbjct: 434 RLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKLAEMNRKNRFENFKNAS 493
Query: 781 EKKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANING-G 605
E KPVNT LKAGEAGYDPFSRRWTRSRNYY + G AAG N + + A NG G
Sbjct: 494 EMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAG--NNSVNGNVAGAGSNGTG 551
Query: 604 VEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAH 425
GKLVDT APVDQGTESN+LHNFELPISLA+LQKFGGA
Sbjct: 552 APVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLALLQKFGGAQ 611
Query: 424 GAQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
GAQAGFMARKQ++EATVG + ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 612 GAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656
>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
[Citrus sinensis] gi|568867309|ref|XP_006486981.1|
PREDICTED: RNA polymerase-associated protein RTF1 homolog
isoform X2 [Citrus sinensis]
Length = 643
Score = 576 bits (1485), Expect = e-161
Identities = 295/403 (73%), Positives = 331/403 (82%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
MADSDD+ S PT++DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPI
Sbjct: 244 MADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI 303
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLCMVRNVDATEPDR YKL+N+TT KYLNV WGNESSAARWQMAM+SDS PL+EEF+QW
Sbjct: 304 YRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQW 363
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
+REVER+ G M SKQ+VLEK+D+IQK NTFVYSAATVKQMLQEKKSA+ RPLNVAAEKDR
Sbjct: 364 LREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDR 423
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRELEVA+ R+DEV++ERIK RLQELE SR ++ D+KAIRLAEMN++NRVENFKNASE
Sbjct: 424 LRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASE 483
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGGVE 599
K VNTSLKAGEAGYDPFSRRWTRSRNYY+S G+E E NGD + V NG
Sbjct: 484 LKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP-GEEVTAEANGDKNGV--PGGANGEEG 540
Query: 598 XXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHGA 419
GKLVDT AP+D GTESN+LH+FEL ISL L+KFGG G
Sbjct: 541 ATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGV 600
Query: 418 QAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
AGFMARKQR+EATVGC +PENDGRRHALTLTV DYKRRRGLL
Sbjct: 601 LAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
>ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
RTF1 homolog [Prunus mume]
Length = 648
Score = 576 bits (1484), Expect = e-161
Identities = 292/404 (72%), Positives = 334/404 (82%), Gaps = 1/404 (0%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
M DSDDE+ S+ TF+DIKEITIRRSKLAKW MEPFF+ELIVGCFVRVGIG+S+SGPI
Sbjct: 248 MMDSDDER---SEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKSGPI 304
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLCMVRNVDA++PDR+YKL+NKTT+KYLNVVWGNE+SAARWQMAMISDS+P++EEF+QW
Sbjct: 305 YRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSAPVEEEFKQW 364
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
VREVERS G + SKQ+VLEK++AI+K NTFVYSAATVKQM++EKKSA+ RPLN+A EKDR
Sbjct: 365 VREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRPLNIALEKDR 424
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRELEVA+ ++D+ EV+RIK RLQ+LE RQ+QG DSKA+RLAEMN++NRVENFKNASE
Sbjct: 425 LRRELEVAQSKHDDAEVDRIKTRLQQLEARRQSQGKDSKAVRLAEMNRKNRVENFKNASE 484
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANING-GV 602
KPV T LKAGEAGYDPFSRRWTRSRNYY+S G + E DA L NG V
Sbjct: 485 LKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALADIESNGTAV 544
Query: 601 EXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHG 422
GKL+DT APVD GTESNL+HNFELPISLA LQKFGG G
Sbjct: 545 VGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLATLQKFGGPQG 604
Query: 421 AQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
AQ GF+ARKQR+EATVGC +PENDGRRHALTLTVSDYKRRRGLL
Sbjct: 605 AQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 648
>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
gi|462413781|gb|EMJ18830.1| hypothetical protein
PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 576 bits (1484), Expect = e-161
Identities = 293/404 (72%), Positives = 333/404 (82%), Gaps = 1/404 (0%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
M DSDDE+ S+ TF+DIKEITIRRSKLAKW MEPFF+ELIVGCFVRVGIG+S+SGPI
Sbjct: 246 MMDSDDER---SEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKSGPI 302
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLCMVRNVDA++PDR+YKL+NKTT+KYLNVVWGNE+SAARWQMAMISDS+PL+EEF+QW
Sbjct: 303 YRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSAPLEEEFKQW 362
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
VREVERS G + SKQ+VLEK++AI+K NTFVYSAATVKQM++EKKSA+ RPLN+A EKDR
Sbjct: 363 VREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRPLNIALEKDR 422
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRELEVA+ ++D+ EVERIK RLQ+LE RQ+QG DSKA+RLAEMN++NRVENFKNASE
Sbjct: 423 LRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRLAEMNRKNRVENFKNASE 482
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANING-GV 602
KPV T LKAGEAGYDPFSRRWTRSRNYY+S G + E DA L NG V
Sbjct: 483 LKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALADIESNGTAV 542
Query: 601 EXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHG 422
GKL+DT APVD GTESNL+HNFELPISLA LQKFGG G
Sbjct: 543 VGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLATLQKFGGPQG 602
Query: 421 AQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
AQ GF+ARKQR+EATVGC +PENDGRRHALTLTVSDYKRR GLL
Sbjct: 603 AQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646
>ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gossypium
raimondii] gi|763802543|gb|KJB69481.1| hypothetical
protein B456_011G025800 [Gossypium raimondii]
gi|763802544|gb|KJB69482.1| hypothetical protein
B456_011G025800 [Gossypium raimondii]
gi|763802545|gb|KJB69483.1| hypothetical protein
B456_011G025800 [Gossypium raimondii]
Length = 660
Score = 575 bits (1483), Expect = e-161
Identities = 293/404 (72%), Positives = 332/404 (82%), Gaps = 1/404 (0%)
Frame = -2
Query: 1498 MADSDDEK-TSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 1322
M DS+DE+ T PTF DIKEITIRRSKLAKW MEPFF+ELIVGCFVRVGIG+S++G
Sbjct: 257 MVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKTGA 316
Query: 1321 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQ 1142
IYRLCMVRNVDAT+PDR YKL+NKTTYKYLNVVWGNESSAARWQMAMISDS PL+EEF Q
Sbjct: 317 IYRLCMVRNVDATDPDRTYKLENKTTYKYLNVVWGNESSAARWQMAMISDSPPLEEEFRQ 376
Query: 1141 WVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKD 962
+REVERS G M SKQ+VLEK++A+QK TFVYSAATVKQMLQEKKS++ RPLNVAAEKD
Sbjct: 377 LIREVERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQEKKSSSSRPLNVAAEKD 436
Query: 961 RLRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNAS 782
RLRR+LE+A+ ++D+VEVERIK RLQ+LE SRQ+Q D+KA+RLAEMN++NRVENFKNAS
Sbjct: 437 RLRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDAKAVRLAEMNRKNRVENFKNAS 496
Query: 781 EKKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGGV 602
KPVNT LKAGEAGYDPFSRRWTRSRNYY + + G +AA NGD + + N N
Sbjct: 497 GLKPVNTGLKAGEAGYDPFSRRWTRSRNYYNAKAPGGDAAAVANGDTNGAIGSGNGNDAG 556
Query: 601 EXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHG 422
GKLVDT APVD+GTESN+LH+FELPISL VL+KFGG G
Sbjct: 557 AAAAEAGRAATAAALQEAAGAGKLVDTNAPVDEGTESNMLHDFELPISLDVLRKFGGHEG 616
Query: 421 AQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
A AGFMARKQR+EATVGC +PENDGRRHALTLTVSDYKRRRGLL
Sbjct: 617 AVAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 660
>gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sinensis]
gi|641828832|gb|KDO47970.1| hypothetical protein
CISIN_1g006477mg [Citrus sinensis]
Length = 643
Score = 575 bits (1481), Expect = e-161
Identities = 294/403 (72%), Positives = 331/403 (82%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
MADSDD+ S PT++DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPI
Sbjct: 244 MADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI 303
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLCMVRNVDATEPDR YKL+N+TT KYLNV WGNESSAARWQMAM+SDS PL+EEF+QW
Sbjct: 304 YRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQW 363
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
+REVER+ G M SKQ+VLEK+++IQK NTFVYSAATVKQMLQEKKSA+ RPLNVAAEKDR
Sbjct: 364 LREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDR 423
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRELEVA+ R+DEV++ERIK RLQELE SR ++ D+KAIRLAEMN++NRVENFKNASE
Sbjct: 424 LRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASE 483
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGGVE 599
K VNTSLKAGEAGYDPFSRRWTRSRNYY+S G+E E NGD + V NG
Sbjct: 484 LKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP-GEEVTAEANGDKNGV--PGGANGEEG 540
Query: 598 XXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHGA 419
GKLVDT AP+D GTESN+LH+FEL ISL L+KFGG G
Sbjct: 541 ATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGV 600
Query: 418 QAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
AGFMARKQR+EATVGC +PENDGRRHALTLTV DYKRRRGLL
Sbjct: 601 LAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
>ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Eucalyptus
grandis] gi|629109481|gb|KCW74627.1| hypothetical protein
EUGRSUZ_E03353 [Eucalyptus grandis]
Length = 653
Score = 574 bits (1480), Expect = e-161
Identities = 291/405 (71%), Positives = 331/405 (81%), Gaps = 2/405 (0%)
Frame = -2
Query: 1498 MADSDDEKTS-ESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSG- 1325
+ DSDD++ S+T FED+KEIT+RRSKL KWFMEPFF+ELIVGCFVRVGIG S+S
Sbjct: 249 LVDSDDDRALLGSETLKFEDVKEITVRRSKLGKWFMEPFFEELIVGCFVRVGIGMSKSRQ 308
Query: 1324 PIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFE 1145
PIYRLC++RNVDA++PDRQYKL+NK TYKYLNVVWGNESSAARWQMAM+SDS PL+EEF
Sbjct: 309 PIYRLCIIRNVDASDPDRQYKLENKMTYKYLNVVWGNESSAARWQMAMVSDSPPLEEEFN 368
Query: 1144 QWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEK 965
QWVREVERS G M SKQ+VLEK++AI+K NTFVYSAATVKQMLQEKKSA+ RP+N+AAEK
Sbjct: 369 QWVREVERSGGRMPSKQDVLEKKEAIKKINTFVYSAATVKQMLQEKKSASSRPMNIAAEK 428
Query: 964 DRLRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNA 785
DRLRRELE+A+ + DE EV+RIK +LQ+LE +RQ Q D+KAI+LAEMN++NRVENFKNA
Sbjct: 429 DRLRRELEIAQYKEDEAEVKRIKEKLQQLEATRQAQKTDAKAIKLAEMNRKNRVENFKNA 488
Query: 784 SEKKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGG 605
SE KPVNT LKAGEAGYDPFSRRWTRSRNYY+S G AG N + + VA NG
Sbjct: 489 SELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPNGGSEAGGANDNVNVASMVAESNGS 548
Query: 604 VEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAH 425
V GKLVDT APVDQGTESNLLHNFELPISL VL+KFGGA
Sbjct: 549 VPVVSESGVVATVEALEAAADAGKLVDTNAPVDQGTESNLLHNFELPISLNVLRKFGGAQ 608
Query: 424 GAQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
GA GFM+RKQR+EATVGC +PENDGRRH LTLTVSDYKRRRGLL
Sbjct: 609 GALTGFMSRKQRIEATVGCRVPENDGRRHILTLTVSDYKRRRGLL 653
>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|590624750|ref|XP_007025692.1| PAF1 complex component
isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 573 bits (1478), Expect = e-160
Identities = 290/404 (71%), Positives = 330/404 (81%), Gaps = 1/404 (0%)
Frame = -2
Query: 1498 MADSDDEKTSESKT-PTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 1322
M DSDD++ + PTF+DIKEITIRRSKLAKWFMEPFF+ELIVGC+VRVGIG+S+SGP
Sbjct: 258 MVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEELIVGCYVRVGIGRSKSGP 317
Query: 1321 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQ 1142
IYRLCMVRNVDATEP+R YKL+NKTTYKYLNVVWGNESSAARWQMAMISDS P +EEF Q
Sbjct: 318 IYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARWQMAMISDSPPQEEEFRQ 377
Query: 1141 WVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKD 962
+RE+ERS G M SKQ+VLEK++A+QK TFVYSAATVKQMLQEKKS + RPLN+AAEKD
Sbjct: 378 LIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQEKKSTSSRPLNIAAEKD 437
Query: 961 RLRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNAS 782
RLRR+LE+A+ ++DE EVERIK RLQ+LE SRQ Q D+KA+RLAEMN++NR ENFKNAS
Sbjct: 438 RLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVRLAEMNRKNRAENFKNAS 497
Query: 781 EKKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGGV 602
E KPVNT LKAGEAGYDPFSRRWTRSRNYY++ G +AA NGD V+ N N
Sbjct: 498 ELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVANGDRIGVIASGNGN-DA 556
Query: 601 EXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHG 422
GKLVDT APVD+GTESN+LH+FE+PISL LQ+FGG G
Sbjct: 557 RAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHDFEIPISLNALQRFGGPQG 616
Query: 421 AQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
A AGFMARKQR+EATVGC +PENDGRRHALTLTVSDYKRRRGLL
Sbjct: 617 AVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660
>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
gi|557524836|gb|ESR36142.1| hypothetical protein
CICLE_v10028000mg [Citrus clementina]
Length = 643
Score = 573 bits (1477), Expect = e-160
Identities = 293/403 (72%), Positives = 331/403 (82%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
MADSDD+ S PT++DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPI
Sbjct: 244 MADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI 303
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLCMVRNVDATEPDR YKL+N+TT KYLNV WGNESSAARWQMAM+SDS PL+EEF+QW
Sbjct: 304 YRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQW 363
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
+REVER+ G M SKQ+VLEK+++IQK NTFVYSAATVKQMLQEKKSA+ RPLNVAAEKDR
Sbjct: 364 LREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDR 423
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRELEVA+ R+D+V++ERIK RLQELE SR ++ D+KAIRLAEMN++NRVENFKNASE
Sbjct: 424 LRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASE 483
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANINGGVE 599
K VNTSLKAGEAGYDPFSRRWTRSRNYY+S G+E E NGD + V NG
Sbjct: 484 LKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP-GEEVTAEANGDKNGV--PGGANGEEG 540
Query: 598 XXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHGA 419
GKLVDT AP+D GTESN+LH+FEL ISL L+KFGG G
Sbjct: 541 ATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGV 600
Query: 418 QAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
AGFMARKQR+EATVGC +PENDGRRHALTLTV DYKRRRGLL
Sbjct: 601 LAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
>ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
bretschneideri]
Length = 657
Score = 572 bits (1474), Expect = e-160
Identities = 293/404 (72%), Positives = 331/404 (81%), Gaps = 1/404 (0%)
Frame = -2
Query: 1498 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 1319
M DSDDE+ S+ TF+DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S+SG I
Sbjct: 257 MIDSDDER---SEGLTFDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGAI 313
Query: 1318 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQW 1139
YRLCMVRNVDA++PDRQYKL+NKTT+KYLNVVWGNE+SAARWQMAMISDS+PL+EEF+QW
Sbjct: 314 YRLCMVRNVDASDPDRQYKLENKTTHKYLNVVWGNENSAARWQMAMISDSAPLEEEFKQW 373
Query: 1138 VREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDR 959
+REVERS G + SK++VLEK++AI+KTN+FVYSAATVKQM+QEKKSA+ RPLN+A EKDR
Sbjct: 374 IREVERSGGRLPSKEDVLEKKEAIKKTNSFVYSAATVKQMIQEKKSASSRPLNIALEKDR 433
Query: 958 LRRELEVAKMRYDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASE 779
LRRELEVAK + D+ EVERI+ RLQ+LE RQ+QG DSKAIRLAEMN++NRVENFKNASE
Sbjct: 434 LRRELEVAKSKQDDAEVERIQTRLQQLEARRQSQGKDSKAIRLAEMNRKNRVENFKNASE 493
Query: 778 KKPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAGETNGDASAVLEVANING-GV 602
KP N LKAGEAGYDPFSRRWTRSRNYY+S G + E A L NG V
Sbjct: 494 LKPKNIGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKEEAEAIAVADGALADIESNGTAV 553
Query: 601 EXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAHG 422
GKL+DT APVD GTESNL HNFELPISLA LQKFGG G
Sbjct: 554 VGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLKHNFELPISLAALQKFGGPQG 613
Query: 421 AQAGFMARKQRMEATVGCTIPENDGRRHALTLTVSDYKRRRGLL 290
AQ GF+ARKQR+EATVGC +PENDGRRHALTLTVSDYKRRRGLL
Sbjct: 614 AQKGFLARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 657