BLASTX nr result
ID: Forsythia22_contig00016176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00016176
(764 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP16284.1| unnamed protein product [Coffea canephora] 210 7e-52
ref|XP_010088193.1| hypothetical protein L484_005539 [Morus nota... 191 3e-46
ref|XP_012467190.1| PREDICTED: pentatricopeptide repeat-containi... 191 3e-46
ref|XP_007045272.1| Tetratricopeptide repeat (TPR)-like superfam... 185 2e-44
ref|XP_010513901.1| PREDICTED: pentatricopeptide repeat-containi... 173 9e-41
ref|XP_008221361.1| PREDICTED: pentatricopeptide repeat-containi... 173 9e-41
ref|XP_010502157.1| PREDICTED: pentatricopeptide repeat-containi... 170 1e-39
ref|XP_010424946.1| PREDICTED: pentatricopeptide repeat-containi... 167 5e-39
ref|XP_011654465.1| PREDICTED: pentatricopeptide repeat-containi... 167 8e-39
ref|XP_002876773.1| pentatricopeptide repeat-containing protein ... 166 2e-38
ref|NP_178283.1| pentatricopeptide repeat-containing protein [Ar... 165 2e-38
ref|XP_012086340.1| PREDICTED: pentatricopeptide repeat-containi... 164 4e-38
ref|XP_008452410.1| PREDICTED: pentatricopeptide repeat-containi... 164 5e-38
ref|XP_008452408.1| PREDICTED: pentatricopeptide repeat-containi... 164 5e-38
ref|XP_008452406.1| PREDICTED: pentatricopeptide repeat-containi... 164 5e-38
ref|XP_010554407.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 163 9e-38
ref|XP_006395856.1| hypothetical protein EUTSA_v10003932mg [Eutr... 163 9e-38
ref|XP_010275860.1| PREDICTED: pentatricopeptide repeat-containi... 162 2e-37
ref|XP_009114220.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-36
emb|CDY04100.1| BnaA09g18780D [Brassica napus] 142 2e-31
>emb|CDP16284.1| unnamed protein product [Coffea canephora]
Length = 558
Score = 210 bits (535), Expect = 7e-52
Identities = 107/194 (55%), Positives = 136/194 (70%), Gaps = 6/194 (3%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKR----RTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHL 404
M KEA +FF++ L+R R FP FNKSLH LTR C D+SLKLL FISKGY PH+
Sbjct: 1 MTKEALKFFAYGLQRFKASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLVAFISKGYFPHV 60
Query: 403 FSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKE 224
+ NS ISY CNLG SAQ L+N + +LG PD V+Y +LIDG+ RN D+ +AC M++
Sbjct: 61 SAFNSVISYFCNLGFPGSAQKLINLMPKLGCLPDIVSYNSLIDGYLRNADVGDACFMMRK 120
Query: 223 IVCND--NVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKI 50
VC+ NV PD+VTFN +F GFCK G V+ LL YMSLMWKVCVPN TY L+D+YCK+
Sbjct: 121 -VCSGLMNVRPDLVTFNAMFNGFCKVGKVEGLLVYMSLMWKVCVPNVVTYGILVDMYCKM 179
Query: 49 GDLDKGLRVLRDMR 8
+++ RV +DM+
Sbjct: 180 NNVNMAYRVFKDMK 193
Score = 65.1 bits (157), Expect = 4e-08
Identities = 48/187 (25%), Positives = 87/187 (46%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M+++A FS L+ P++ + + + + D +LK LS +G + +
Sbjct: 251 MLEKAAYLFSRMLEDGVEPNIVVYTSMIDGEFKKKNIDNALKYLSRMHDQGIRHDVTAYG 310
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
+ +S LCN+ L+SA + ++ G++PD V + L+ +F ++ A +E +
Sbjct: 311 AIVSGLCNMNRLDSAVEVKKAMMDYGVAPDGVIFATLMHAYFEAGNVEAAMNEYEESLAR 370
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
PDVV L G CK+G + E + S ++ +Y LI CK G+L +
Sbjct: 371 -GFQPDVVALTSLIDGLCKNGRLYEAKLHFSKE----NADEISYNVLIHGMCKEGELSQV 425
Query: 31 LRVLRDM 11
V R+M
Sbjct: 426 EMVYREM 432
Score = 58.5 bits (140), Expect = 4e-06
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNL 338
P++ T+ + + +++ ++ S G P+L S I C G L A L
Sbjct: 164 PNVVTYGILVDMYCKMNNVNMAYRVFKDMKSSGVFPNLQIFTSLIDGYCKAGELEVALGL 223
Query: 337 VNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFC 158
+ R + P+ VTY+ALIDG + + A ++ D V P++V + + G
Sbjct: 224 YLDMHRNSVFPNVVTYSALIDGFCKRGMLEKAAYLFSRML-EDGVEPNIVVYTSMIDGEF 282
Query: 157 KDGMVKELLAYMSLMWKVCVPNDAT-YCTLIDVYCKIGDLDKGLRVLRDM 11
K + L Y+S M + +D T Y ++ C + LD + V + M
Sbjct: 283 KKKNIDNALKYLSRMHDQGIRHDVTAYGAIVSGLCNMNRLDSAVEVKKAM 332
>ref|XP_010088193.1| hypothetical protein L484_005539 [Morus notabilis]
gi|587841736|gb|EXB32333.1| hypothetical protein
L484_005539 [Morus notabilis]
Length = 548
Score = 191 bits (486), Expect = 3e-46
Identities = 90/187 (48%), Positives = 121/187 (64%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++E QFF+H + FP TFNK LH LT C D+SLK+LS+F++K Y PH S N
Sbjct: 1 MVRETLQFFAHLRRTSRFPTPFTFNKLLHHLTSANCGDLSLKILSHFLTKRYVPHPSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S +S+LC G L A+N+V+S+ + G SPD VTY L+DG +NLD+ AC + ++
Sbjct: 61 SVLSFLCKSGQLRFARNVVDSMPKFGFSPDVVTYNCLVDGFCKNLDVEEACFVVSKMRMG 120
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
PD+VTFN LF GF K M +E YM LMWK C+PN TY T +D++CK+G+ D G
Sbjct: 121 -KCGPDLVTFNTLFNGFSKTRMEREAFVYMGLMWKCCLPNVVTYSTFVDMFCKVGNFDLG 179
Query: 31 LRVLRDM 11
+V RDM
Sbjct: 180 YKVFRDM 186
Score = 77.0 bits (188), Expect = 1e-11
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Frame = -2
Query: 556 FQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISY 377
++ F + P+ F L + DI+ +L +P++ + + +
Sbjct: 180 YKVFRDMVNAGVLPNSVVFTALLDGYCKAGNLDIAFELFVEMKRSSVSPNVVTYAALVDG 239
Query: 376 LCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVP 197
C G L A++L + + G+ P++V YT++IDGHF ++ +A M + +C+ +
Sbjct: 240 FCKRGALERAESLFSKMLEDGVEPNSVVYTSIIDGHFVKGNVDDAVKYMTK-MCDQGLRL 298
Query: 196 DVVTFNVLFRGFCKDGMVKELLAYM-SLMWKVCVPNDATYCTLIDVYCKIGDLDKGLRVL 20
D+ + V+ RGFCK+G + + + M S+ P+ T++D + K GDL + L V
Sbjct: 299 DMTAYEVVIRGFCKNGRLDKAMEVMRSMTESGLFPDKIMLTTVMDAHFKSGDLKRALEVY 358
Query: 19 RDM 11
R++
Sbjct: 359 REI 361
Score = 69.3 bits (168), Expect = 2e-09
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M +EAF + K P++ T++ + + D+ K+ ++ G P+
Sbjct: 141 MEREAFVYMGLMWKC-CLPNVVTYSTFVDMFCKVGNFDLGYKVFRDMVNAGVLPNSVVFT 199
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
+ + C GNL+ A L + R +SP+ VTY AL+DG + + A +++
Sbjct: 200 ALLDGYCKAGNLDIAFELFVEMKRSSVSPNVVTYAALVDGFCKRGALERAESLFSKML-E 258
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDAT-YCTLIDVYCKIGDLDK 35
D V P+ V + + G G V + + YM+ M + D T Y +I +CK G LDK
Sbjct: 259 DGVEPNSVVYTSIIDGHFVKGNVDDAVKYMTKMCDQGLRLDMTAYEVVIRGFCKNGRLDK 318
Query: 34 GLRVLRDM 11
+ V+R M
Sbjct: 319 AMEVMRSM 326
Score = 66.2 bits (160), Expect = 2e-08
Identities = 41/150 (27%), Positives = 71/150 (47%)
Frame = -2
Query: 460 DISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTAL 281
D ++K ++ +G + + I C G L+ A ++ S++ GL PD + T +
Sbjct: 282 DDAVKYMTKMCDQGLRLDMTAYEVVIRGFCKNGRLDKAMEVMRSMTESGLFPDKIMLTTV 341
Query: 280 IDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVC 101
+D HF++ D+ A +EI+ PD+VT + + G K G ++E Y+
Sbjct: 342 MDAHFKSGDLKRALEVYREILFR-GFEPDIVTLSSIMDGLSKKGHLQEARGYLCRE---- 396
Query: 100 VPNDATYCTLIDVYCKIGDLDKGLRVLRDM 11
N+ +Y LID CK G + V R+M
Sbjct: 397 KANEISYTVLIDGMCKEGHFGEVEMVFREM 426
>ref|XP_012467190.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
[Gossypium raimondii] gi|823134781|ref|XP_012467191.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g01740 [Gossypium raimondii]
gi|763747904|gb|KJB15343.1| hypothetical protein
B456_002G171900 [Gossypium raimondii]
gi|763747905|gb|KJB15344.1| hypothetical protein
B456_002G171900 [Gossypium raimondii]
Length = 583
Score = 191 bits (486), Expect = 3e-46
Identities = 96/183 (52%), Positives = 120/183 (65%)
Frame = -2
Query: 553 QFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYL 374
QFFS K +P +FNK LH LT C +SLKLLS+F+SKGYTPH S NS IS+
Sbjct: 41 QFFSDLKKTSKYPDPYSFNKLLHKLTASDCGALSLKLLSFFLSKGYTPHPSSFNSTISFF 100
Query: 373 CNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPD 194
C LG + AQ LVN + G PD TY +LIDG+F+ ++ AC+ + EI D PD
Sbjct: 101 CKLGQSSYAQKLVNLMPLYGCEPDIATYNSLIDGYFKCGEVVKACLIVNEIRV-DKCKPD 159
Query: 193 VVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKGLRVLRD 14
+VTFNVLF GFCK KE YM LMWK C+PN TY T ID++CK+GDL+ G++V RD
Sbjct: 160 LVTFNVLFNGFCKMRKKKEAFVYMGLMWKCCLPNVVTYSTWIDMFCKVGDLNMGVKVFRD 219
Query: 13 MRK 5
M+K
Sbjct: 220 MKK 222
Score = 60.8 bits (146), Expect = 8e-07
Identities = 48/187 (25%), Positives = 79/187 (42%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++ A F LK + P+ + + + +LK L +G + +
Sbjct: 279 MLERAECLFFRMLKDKVKPNSVVYTSIIDAHFKKSNVTDALKYLGKMYVQGLEFDMAAYG 338
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
I+ LCN G + A + ++ + GL PD + T ++D HF+ ++ A EI+
Sbjct: 339 VIIAGLCNTGMFDKASIYMENMVKSGLRPDKLMLTTIMDAHFKAGNVKAALNVYGEILAR 398
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
PDV+ L G CK G + E +Y N +Y LI+ K GD +
Sbjct: 399 -GFDPDVIVLTSLMDGLCKHGCLNEAESYFCR----GKANKISYTVLINGLAKKGDFTEL 453
Query: 31 LRVLRDM 11
RV R+M
Sbjct: 454 NRVFREM 460
>ref|XP_007045272.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508709207|gb|EOY01104.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 597
Score = 185 bits (470), Expect = 2e-44
Identities = 94/183 (51%), Positives = 116/183 (63%)
Frame = -2
Query: 553 QFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYL 374
QF S K +P FNK LH LT C +SLKLLS+F+SKGYTPH S NS+IS+L
Sbjct: 44 QFCSQLKKTSKYPDPFFFNKLLHRLTASNCGTLSLKLLSFFLSKGYTPHPSSFNSSISFL 103
Query: 373 CNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPD 194
C LG + AQ LVNS+ G PD TY +LIDG+F+ D+ AC+ +I PD
Sbjct: 104 CKLGRSDYAQKLVNSMPFYGCEPDIATYNSLIDGYFKCGDVVKACLVFDDIRAG-KCKPD 162
Query: 193 VVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKGLRVLRD 14
+VTFN LF GFCK KE+ YM MWK C+PN TY T ID++CK+GDL G +V RD
Sbjct: 163 LVTFNALFNGFCKMRRNKEVFVYMGYMWKCCLPNVITYSTWIDMFCKLGDLKMGFKVFRD 222
Query: 13 MRK 5
M+K
Sbjct: 223 MKK 225
Score = 63.9 bits (154), Expect = 1e-07
Identities = 50/187 (26%), Positives = 81/187 (43%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++ A F LK + P+ + + + R +LK L+ +G +
Sbjct: 282 MLERAECLFLRMLKDKVQPNSVVYTSIIDGHFKKRNVSDALKYLAKMCVQGIKFDMALYG 341
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
IS L N G + A + ++ + GL PD + T ++D HF+ ++ A E++
Sbjct: 342 VIISGLSNCGRFDKASKFMENMVKSGLLPDKLLLTTMMDAHFKAGNVKAALDVYGELLAR 401
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
PDVV + L G CK G + E +Y N+ +Y LID K GD +
Sbjct: 402 -GFDPDVVVLSSLMDGLCKRGCLHEAESYFCRE----KANEISYTVLIDGLAKKGDFTEV 456
Query: 31 LRVLRDM 11
RV R+M
Sbjct: 457 NRVFREM 463
>ref|XP_010513901.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
[Camelina sativa]
Length = 559
Score = 173 bits (439), Expect = 9e-41
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 2/191 (1%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++EA QF S K FP T NK +H L C +SLKLL+Y +S+GYTPH S N
Sbjct: 1 MVREALQFLSRLRKSSNFPDPFTCNKHIHQLINSNCGVLSLKLLAYLVSRGYTPHRSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S +S++C LG + AQ++V+S+ R G PD ++Y +LIDGH RN DI +AC+ ++ + +
Sbjct: 61 SVVSFVCRLGQVQFAQDIVHSMPRYGCVPDVISYNSLIDGHCRNGDIRSACLVLESLRAS 120
Query: 211 DNVV--PDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLD 38
+ PDVV+FN LF GF K M+ E+ YM +M+K C PN TY T ID +CK G+L
Sbjct: 121 HGFICKPDVVSFNSLFNGFSKMKMLDEVFVYMGVMFKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 37 KGLRVLRDMRK 5
L+ M++
Sbjct: 181 LALKSFNCMKR 191
Score = 72.8 bits (177), Expect = 2e-10
Identities = 47/175 (26%), Positives = 82/175 (46%)
Frame = -2
Query: 568 IKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNS 389
++ A + +S L+ R P+ + + + SD ++K L+ +++G L +
Sbjct: 249 MQRAEEMYSQMLEDRVEPNSLVYTTVIDGYFQKGDSDNAMKFLAKMLNQGMRLDLAAYGV 308
Query: 388 AISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCND 209
IS LC+ G L A +V + + G PD + +T +++ +F++ A V M +
Sbjct: 309 FISGLCSNGKLKEATEIVEGMEKGGFVPDMMIFTTMMNAYFKS-GRMKAAVNMYHKLVER 367
Query: 208 NVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGD 44
PDVV + + G K+G + E +AY + ND Y LID CK GD
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIAYFC----IGKANDVMYTVLIDALCKEGD 418
Score = 70.9 bits (172), Expect = 8e-10
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNL 338
P + +FN + ++ + D + K +P++ + ++ I C G L A
Sbjct: 127 PDVVSFNSLFNGFSKMKMLDEVFVYMGVMF-KCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 337 VNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFC 158
N + R LSP+ VT+T LIDG+ + D+ V++ E + + +VVT+ L GFC
Sbjct: 186 FNCMKRDALSPNVVTFTCLIDGYCKAGDL-EVAVSLYEEMRRVRMSLNVVTYTALIDGFC 244
Query: 157 KDGMVKELLAYMSLMWKVCV-PNDATYCTLIDVYCKIGDLDKGLRVLRDM 11
K G ++ S M + V PN Y T+ID Y + GD D ++ L M
Sbjct: 245 KKGKMQRAEEMYSQMLEDRVEPNSLVYTTVIDGYFQKGDSDNAMKFLAKM 294
>ref|XP_008221361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
[Prunus mume]
Length = 818
Score = 173 bits (439), Expect = 9e-41
Identities = 90/183 (49%), Positives = 115/183 (62%)
Frame = -2
Query: 553 QFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYL 374
+FF+ + FP T NK LH L C ++S+K+L + +SKGY PH S NS IS+
Sbjct: 284 KFFALLRRTSQFPTPFTCNKLLHSLISSNCGELSVKILCHLLSKGYNPHPSSFNSVISFF 343
Query: 373 CNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPD 194
C LG+++ A+ LV+S+ R G PD VTY +LIDG+ + DI AC+ M++I PD
Sbjct: 344 CKLGHISFARTLVDSMPRYGCLPDIVTYNSLIDGYCKFCDIDEACLMMRKIRIG-GCRPD 402
Query: 193 VVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKGLRVLRD 14
+ TFNVLF GFCK M KE YM LMWK C PN TY T ID++CK GDL G RVL D
Sbjct: 403 LGTFNVLFNGFCKVKMKKEAFVYMGLMWKSCSPNVVTYSTFIDMFCKTGDLGLGYRVLGD 462
Query: 13 MRK 5
M K
Sbjct: 463 MVK 465
Score = 105 bits (263), Expect = 2e-20
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = -2
Query: 307 PDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLA 128
PD VTY +LIDG+ + DI AC+ MKEI PD+VTFNVL GFC M KE L
Sbjct: 8 PDIVTYNSLIDGYCKFSDIDEACLLMKEIRIG-GCRPDLVTFNVLLNGFCNIKMKKEALV 66
Query: 127 YMSLMWKVCVPNDATYCTLIDVYCKIGDLDKGLRVLRDMRK 5
Y+ LMWK C PN +Y ID++CK+GDL G R+L DM K
Sbjct: 67 YIGLMWKSCSPNVVSYSHFIDMFCKMGDLGLGYRLLGDMVK 107
Score = 75.5 bits (184), Expect = 3e-11
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNL 338
P L TFN L+ + +L + + K +P++ S + I C +G+L L
Sbjct: 43 PDLVTFNVLLNGFCNIKMKKEALVYIG-LMWKSCSPNVVSYSHFIDMFCKMGDLGLGYRL 101
Query: 337 VNSISRLGLSPDTVTYTALIDGHFR--NLDITNACVTMKEIVCNDNVVPDVVTFNVLFRG 164
+ + + G+ P+ T+T+LIDG+ + NL++ + E + +++P+VVT+N L +G
Sbjct: 102 LGDMVKDGVLPNFFTFTSLIDGYCKAGNLEV---AFELLEKMRQSSLIPNVVTYNALIKG 158
Query: 163 FCKDGMVKELLAYMSLMWK-VCVPNDATYCTLIDVYCKIGDLDKGLRVLRDM 11
C GM+ +W+ PN A Y ++ID + K G+LD ++ + M
Sbjct: 159 ICMKGMLGRADYLFPKVWEDGFEPNSAVYTSMIDGHLKKGNLDDAMKYMSKM 210
Score = 66.2 bits (160), Expect = 2e-08
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Frame = -2
Query: 535 LKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNL 356
+K P+L F + + +++ +LL P++ + N+ I LC G
Sbjct: 464 VKDGVLPNLVAFTSLIDGYCKAGNLEVAFELLEKMRQSSLLPNVVTYNALIKGLCMQGMS 523
Query: 355 NSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNV 176
A L + + G+ P++ YT++IDGH + ++ +A M + + DV + V
Sbjct: 524 ERADYLFSKMWEDGVEPNSAVYTSIIDGHLQKGNVDDAMKYMSRMH-DQGFNLDVAAYGV 582
Query: 175 LFRGFCKDGMV-KELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKGLRVLRDM 11
+ G CK+ + K +L ++ VP+ T++D Y K G+L L V R++
Sbjct: 583 VISGLCKNSRLDKAILFIEDMVSSGLVPDQMLLATIMDAYFKAGNLKAALGVYREL 638
Score = 65.1 bits (157), Expect = 4e-08
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNL 338
P++ +++ + + + +LL + G P+ F+ S I C GNL A L
Sbjct: 77 PNVVSYSHFIDMFCKMGDLGLGYRLLGDMVKDGVLPNFFTFTSLIDGYCKAGNLEVAFEL 136
Query: 337 VNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFC 158
+ + + L P+ VTY ALI G + A + V D P+ + + G
Sbjct: 137 LEKMRQSSLIPNVVTYNALIKGICMKGMLGRADYLFPK-VWEDGFEPNSAVYTSMIDGHL 195
Query: 157 KDGMVKELLAYMSLMWKVCVPND-ATYCTLIDVYCKIGDLDKGLRVLRDM 11
K G + + + YMS M D A Y +I CK G LDK ++ + DM
Sbjct: 196 KKGNLDDAMKYMSKMHDQGFSLDVAAYAAVISSLCKNGRLDKVMQFIEDM 245
Score = 62.0 bits (149), Expect = 4e-07
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M KEAF + K + P++ T++ + + + ++L + G P+L +
Sbjct: 418 MKKEAFVYMGLMWKSCS-PNVVTYSTFIDMFCKTGDLGLGYRVLGDMVKDGVLPNLVAFT 476
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S I C GNL A L+ + + L P+ VTY ALI G ++ + +
Sbjct: 477 SLIDGYCKAGNLEVAFELLEKMRQSSLLPNVVTYNALIKGLCMQ-GMSERADYLFSKMWE 535
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPND-ATYCTLIDVYCKIGDLDK 35
D V P+ + + G + G V + + YMS M D A Y +I CK LDK
Sbjct: 536 DGVEPNSAVYTSIIDGHLQKGNVDDAMKYMSRMHDQGFNLDVAAYGVVISGLCKNSRLDK 595
Query: 34 GLRVLRDM 11
+ + DM
Sbjct: 596 AILFIEDM 603
>ref|XP_010502157.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01740-like isoform X1 [Camelina sativa]
gi|727441311|ref|XP_010502158.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g01740-like isoform X2 [Camelina sativa]
Length = 559
Score = 170 bits (430), Expect = 1e-39
Identities = 83/191 (43%), Positives = 120/191 (62%), Gaps = 2/191 (1%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++EA QF S K FP T NK +H L C +SLK+L+Y +S+GYTPH S N
Sbjct: 1 MVREALQFLSRLRKSSNFPDPITCNKHIHQLISSNCGVLSLKILAYLVSRGYTPHRSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S +S++C LG + AQ++V+S+ R G PD ++Y +LIDG+ RN DI +AC+ ++ + +
Sbjct: 61 SVVSFVCRLGQVQFAQDIVHSMPRYGCVPDVISYNSLIDGYCRNGDIRSACLVLERLRAS 120
Query: 211 DNVV--PDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLD 38
+ PDVV+FN LF GF K M+ E+ YM +M+K C PN TY T ID +CK G+L
Sbjct: 121 HGFICKPDVVSFNSLFNGFSKMKMLDEVFVYMGVMFKCCSPNVVTYSTWIDTFCKSGELK 180
Query: 37 KGLRVLRDMRK 5
L+ M++
Sbjct: 181 LALKSFNCMKR 191
Score = 72.8 bits (177), Expect = 2e-10
Identities = 47/175 (26%), Positives = 82/175 (46%)
Frame = -2
Query: 568 IKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNS 389
++ A + +S L+ R P+ + + + SD ++K L+ +++G L +
Sbjct: 249 MQRAEEMYSQMLEDRVEPNSLVYTTVIDGYFQKGDSDNAMKFLAKMLNQGMRLDLAAYGV 308
Query: 388 AISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCND 209
IS LC+ G L A +V + + G PD + +T +++ +F++ A V M +
Sbjct: 309 IISGLCSNGKLKEATEIVEGMEKGGFVPDMMIFTTMMNAYFKS-GRMKAAVNMYHKLVER 367
Query: 208 NVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGD 44
PDVV + + G K+G + E +AY + ND Y LID CK GD
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAVAYFCIE----KANDVMYTVLIDALCKEGD 418
>ref|XP_010424946.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01740-like [Camelina sativa]
Length = 551
Score = 167 bits (424), Expect = 5e-39
Identities = 82/191 (42%), Positives = 118/191 (61%), Gaps = 2/191 (1%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++EA QF S K FP T NK +H L C +SLK L+Y +S+GYTPH N
Sbjct: 1 MVREALQFISRLRKSSNFPDPFTCNKHIHQLINSNCGVLSLKFLAYLVSRGYTPHRSYFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S +S++C LG + AQ++V+S+ R G PD ++Y +LIDG+ RN DI +AC+ ++ + +
Sbjct: 61 SVVSFVCRLGQVQFAQDIVHSMPRYGCEPDVISYNSLIDGYCRNGDIRSACLVLERLRAS 120
Query: 211 DNVV--PDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLD 38
+ PDVV+FN LF GF K M+ E+ YM +M+K C PN TY T ID +CK G+L
Sbjct: 121 HGFICKPDVVSFNSLFNGFSKMKMLDEVFVYMGVMFKCCSPNVVTYSTWIDTFCKSGELK 180
Query: 37 KGLRVLRDMRK 5
L+ M++
Sbjct: 181 LALKSFNCMKR 191
Score = 71.2 bits (173), Expect = 6e-10
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNL 338
P + +FN + ++ + D + K +P++ + ++ I C G L A
Sbjct: 127 PDVVSFNSLFNGFSKMKMLDEVFVYMGVMF-KCCSPNVVTYSTWIDTFCKSGELKLALKS 185
Query: 337 VNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFC 158
N + R LSP+ VT+T LIDG+ + D+ V++ E + + +VVT+ L GFC
Sbjct: 186 FNCMKRDALSPNVVTFTCLIDGYCKAGDL-EVVVSLYEEMRRVRMSLNVVTYTALIDGFC 244
Query: 157 KDG-MVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKGLRVLRDM 11
K G M + Y+ ++ PN Y T+ID Y + GD D ++ L M
Sbjct: 245 KKGKMQRAEEMYLQMLEDRVEPNSLVYTTVIDGYFQKGDSDNAMKFLAKM 294
Score = 69.7 bits (169), Expect = 2e-09
Identities = 45/175 (25%), Positives = 82/175 (46%)
Frame = -2
Query: 568 IKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNS 389
++ A + + L+ R P+ + + + SD ++K L+ +++G + +
Sbjct: 249 MQRAEEMYLQMLEDRVEPNSLVYTTVIDGYFQKGDSDNAMKFLAKMLNQGMRLDIAAYGV 308
Query: 388 AISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCND 209
IS LC+ G L A ++V + + G PD + +T +++ +F++ A V M +
Sbjct: 309 IISGLCSNGKLKEATDIVEGMEKGGFVPDMMIFTTMMNAYFKS-GRMKAAVDMYHKLVER 367
Query: 208 NVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGD 44
PDVV + + G K+G + E +AY + ND Y LID CK GD
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAVAYFCIE----KANDVMYTVLIDALCKEGD 418
>ref|XP_011654465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
isoform X1 [Cucumis sativus]
Length = 541
Score = 167 bits (422), Expect = 8e-39
Identities = 83/189 (43%), Positives = 114/189 (60%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M+KEA Q+ +H + FP T NK LH L C +S KLL +F+SKGYTPH S N
Sbjct: 1 MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S IS+ C GN+ A+++ S+SR G SPD V+Y +L+DG+ + I AC + +
Sbjct: 61 SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
+ PD+V FN+LF GF K M E Y LMWK C+P+ TY T +D++CK+GD+ G
Sbjct: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
Query: 31 LRVLRDMRK 5
R+ DM K
Sbjct: 181 NRMFLDMMK 189
>ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322611|gb|EFH53032.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 559
Score = 166 bits (419), Expect = 2e-38
Identities = 81/191 (42%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M+KEA QF S K P T NK +H L C +SLK L+Y +S+GY PH S N
Sbjct: 1 MVKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S +S++C LG + A ++V+S+ R G PD ++Y +LIDGH RN DI +AC+ ++ + +
Sbjct: 61 SVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRAS 120
Query: 211 DNVV--PDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLD 38
PD+V+FN LF GF K M+ E+ YM +M K C PN TY T ID++CK G+L
Sbjct: 121 YGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELK 180
Query: 37 KGLRVLRDMRK 5
L+ M++
Sbjct: 181 LALKSFNCMKR 191
Score = 65.9 bits (159), Expect = 3e-08
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNL 338
P + +FN + ++ + D + + K +P++ + ++ I C G L A
Sbjct: 127 PDIVSFNTLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDMFCKSGELKLALKS 185
Query: 337 VNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFC 158
N + R L P+ VT+T LIDG+ + D+ V++ E + + +VVT+ L GFC
Sbjct: 186 FNCMKRDALFPNVVTFTCLIDGYCKAGDL-EVVVSLYEEMRRVRMSLNVVTYTALIDGFC 244
Query: 157 KDG-MVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKGLRVLRDM 11
K G M + Y+ ++ PN Y T+I+ + + GD D ++ L M
Sbjct: 245 KKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKM 294
Score = 64.7 bits (156), Expect = 6e-08
Identities = 39/140 (27%), Positives = 66/140 (47%)
Frame = -2
Query: 463 SDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTA 284
SD ++K L+ +++G + + IS LC +G L A +V + + L PD + +T
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTT 343
Query: 283 LIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKV 104
+++ +F++ A V M + PDVV + + G K+G + E ++Y
Sbjct: 344 MMNAYFKS-GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTE--- 399
Query: 103 CVPNDATYCTLIDVYCKIGD 44
ND Y LID CK D
Sbjct: 400 -KANDVMYTVLIDALCKEED 418
>ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g01740 gi|4220475|gb|AAD12698.1| hypothetical protein
[Arabidopsis thaliana] gi|330250397|gb|AEC05491.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 559
Score = 165 bits (418), Expect = 2e-38
Identities = 80/191 (41%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++EA QF S K P T NK +H L C +SLK L+Y +S+GYTPH S N
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S +S++C LG + A+++V+S+ R G PD ++Y +LIDGH RN DI +A + ++ + +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 211 DNVV--PDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLD 38
+ PD+V+FN LF GF K M+ E+ YM +M K C PN TY T ID +CK G+L
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 37 KGLRVLRDMRK 5
L+ M++
Sbjct: 181 LALKSFHSMKR 191
Score = 70.5 bits (171), Expect = 1e-09
Identities = 45/175 (25%), Positives = 80/175 (45%)
Frame = -2
Query: 568 IKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNS 389
++ A + +S ++ R P+ + + + SD ++K L+ +++G + +
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 388 AISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCND 209
IS LC G L A +V + + L PD V +T +++ +F++ A V M +
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS-GRMKAAVNMYHKLIER 367
Query: 208 NVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGD 44
PDVV + + G K+G + E + Y + ND Y LID CK GD
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE----KANDVMYTVLIDALCKEGD 418
Score = 69.3 bits (168), Expect = 2e-09
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNL 338
P + +FN + ++ + D + + K +P++ + ++ I C G L A
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 337 VNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFC 158
+S+ R LSP+ VT+T LIDG+ + D+ A KE + + +VVT+ L GFC
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE-MRRVRMSLNVVTYTALIDGFC 244
Query: 157 KDGMVKELLAYMSLMWKVCV-PNDATYCTLIDVYCKIGDLDKGLRVLRDM 11
K G ++ S M + V PN Y T+ID + + GD D ++ L M
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
>ref|XP_012086340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
[Jatropha curcas] gi|802732188|ref|XP_012086341.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g01740 [Jatropha curcas]
gi|802732190|ref|XP_012086342.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g01740
[Jatropha curcas]
Length = 574
Score = 164 bits (416), Expect = 4e-38
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 5/194 (2%)
Frame = -2
Query: 574 IMIKEAFQFFSHHLKRRTFPHLP-TFNKSLHCLTRYRCSDISLKLLSYFISKGYTP---- 410
I+ +EA FFSH + P P FNK LHCLT C D+SLK+ S+F+SK YTP
Sbjct: 10 IVTREALGFFSHLKRTSNQPEDPYIFNKHLHCLTNSSCGDLSLKIFSHFLSKWYTPLPSS 69
Query: 409 HLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTM 230
S NS IS+L LG+ + AQN+++ + + G PD VTY +LIDG+ + ++ AC +
Sbjct: 70 FNSSFNSVISFLSKLGHASYAQNIMDLMPKFGSLPDMVTYNSLIDGYCKYGNVKEACFIV 129
Query: 229 KEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKI 50
I + D+VTFNVLF GFCK M++E YM LMWK +PN TY T +D++CK+
Sbjct: 130 NRIRSGGCRL-DLVTFNVLFNGFCKRKMMREAFVYMGLMWKCYLPNVVTYGTWVDMFCKM 188
Query: 49 GDLDKGLRVLRDMR 8
GDL G ++ ++MR
Sbjct: 189 GDLGIGYKIFKEMR 202
Score = 59.7 bits (143), Expect = 2e-06
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Frame = -2
Query: 415 TPHLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACV 236
+P++ + I C G L A+ L + +G+ P++ YT++IDGHF+ + A
Sbjct: 242 SPNVVTYAVLIDGFCKRGMLKKAEKLFLKMLEVGMEPNSTVYTSIIDGHFKKGTVDTAMK 301
Query: 235 TMKEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCV-PNDATYCTLIDVY 59
+E +C+ ++ DVV + V+ G +G +L M M + + P+ T++D +
Sbjct: 302 YFRE-MCDTSIKLDVVIYGVVVSGLASNGRFDLVLEVMKDMLRNRITPDKIMLTTIMDAH 360
Query: 58 CKIGDLDKGLRVLRDMRKG 2
K G+ V ++ G
Sbjct: 361 FKAGNTKAAFTVYGELLNG 379
>ref|XP_008452410.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
isoform X4 [Cucumis melo]
Length = 541
Score = 164 bits (415), Expect = 5e-38
Identities = 82/189 (43%), Positives = 114/189 (60%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M+KEA QF +H + FP T NK LH L C +S KLL + +SKGYTPH S N
Sbjct: 1 MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S IS+ C GN+ A+ + S+SR G SPD V+Y +L+DG+ + I AC + +
Sbjct: 61 SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
+ PD+V FN+LF+GF K M E Y+ LMWK +P+ TY T +D++CK+GD++ G
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180
Query: 31 LRVLRDMRK 5
R+ DM K
Sbjct: 181 NRMFLDMMK 189
>ref|XP_008452408.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
isoform X2 [Cucumis melo]
Length = 611
Score = 164 bits (415), Expect = 5e-38
Identities = 82/189 (43%), Positives = 114/189 (60%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M+KEA QF +H + FP T NK LH L C +S KLL + +SKGYTPH S N
Sbjct: 1 MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S IS+ C GN+ A+ + S+SR G SPD V+Y +L+DG+ + I AC + +
Sbjct: 61 SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
+ PD+V FN+LF+GF K M E Y+ LMWK +P+ TY T +D++CK+GD++ G
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180
Query: 31 LRVLRDMRK 5
R+ DM K
Sbjct: 181 NRMFLDMMK 189
Score = 60.5 bits (145), Expect = 1e-06
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Frame = -2
Query: 424 KGYTPHLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFR--NLDI 251
K Y P + + + + C +G++ + + ++G+ P+ + +++LIDG+ + +LD+
Sbjct: 155 KYYLPSIVTYGTFVDMFCKMGDMEMGNRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDV 214
Query: 250 T-NACVTMKEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCV-PNDATYC 77
MKE +V P+ T++ L G K GM+ + + M + PN +
Sbjct: 215 AFEYFERMKEC----SVRPNEFTYSTLIDGCSKRGMLAKADSLFENMLSASILPNCKVFS 270
Query: 76 TLIDVYCKIGDLDKGLRVLRDMRK 5
+LID YCK G+LD M++
Sbjct: 271 SLIDGYCKAGNLDVAFEYFEKMKE 294
>ref|XP_008452406.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
isoform X1 [Cucumis melo]
Length = 611
Score = 164 bits (415), Expect = 5e-38
Identities = 82/189 (43%), Positives = 114/189 (60%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M+KEA QF +H + FP T NK LH L C +S KLL + +SKGYTPH S N
Sbjct: 1 MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S IS+ C GN+ A+ + S+SR G SPD V+Y +L+DG+ + I AC + +
Sbjct: 61 SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
+ PD+V FN+LF+GF K M E Y+ LMWK +P+ TY T +D++CK+GD++ G
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180
Query: 31 LRVLRDMRK 5
R+ DM K
Sbjct: 181 NRMFLDMMK 189
Score = 60.8 bits (146), Expect = 8e-07
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Frame = -2
Query: 424 KGYTPHLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFR--NLDI 251
K Y P + + + + C +G++ + + ++G+ P+ + +++LIDG+ + +LD+
Sbjct: 155 KYYLPSIVTYGTFVDMFCKMGDMEMGNRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDV 214
Query: 250 T-NACVTMKEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCV-PNDATYC 77
MKE +V P+ T++ L G K GM+ + M + PN +
Sbjct: 215 AFEYFERMKEC----SVRPNEFTYSTLIDGCSKRGMLARADSLFEKMLSASILPNCTVFS 270
Query: 76 TLIDVYCKIGDLDKGLRVLRDMRK 5
+LID YCK G+LD M++
Sbjct: 271 SLIDGYCKAGNLDVAFEYFEKMKE 294
Score = 57.4 bits (137), Expect = 9e-06
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M EAF + K P + T+ + + ++ ++ + G P+L +
Sbjct: 142 MKNEAFMYLGLMWKYY-LPSIVTYGTFVDMFCKMGDMEMGNRMFLDMMKVGIVPNLIVFS 200
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S I C G+L+ A + + P+ TY+ LIDG + + A ++ E + +
Sbjct: 201 SLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKRGMLARA-DSLFEKMLS 259
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCV-PNDATYCTLIDVYCKIGDL 41
+++P+ F+ L G+CK G + Y M + V PN+ TY LID K G L
Sbjct: 260 ASILPNCTVFSSLIDGYCKAGNLDVAFEYFEKMKECSVRPNEFTYSRLIDGCSKRGML 317
>ref|XP_010554407.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g01740 [Tarenaya hassleriana]
Length = 396
Score = 163 bits (413), Expect = 9e-38
Identities = 86/191 (45%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++E QF S K FP T+NK LH L + C +SLK L+Y S+G+TPH S +
Sbjct: 1 MVRETLQFISRLRKSSNFPDPITYNKHLHHLIKSNCGVLSLKFLAYLPSRGFTPHRSSFS 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
SAIS++C LG +N A G PD V+Y +LIDG+ RN D+ AC+T+ I +
Sbjct: 61 SAISFICRLGQVNFAX--------YGCLPDVVSYNSLIDGYCRNNDVRRACLTVDRIRSS 112
Query: 211 D--NVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLD 38
N PDV+TFN LF GFCK ++ E YM LM K C N TY T ID +CK GDL
Sbjct: 113 GLYNCKPDVITFNSLFNGFCKMKILSEAFVYMGLMLKCCSSNVVTYSTWIDTFCKSGDLK 172
Query: 37 KGLRVLRDMRK 5
GL+ DM++
Sbjct: 173 IGLKTFNDMKR 183
>ref|XP_006395856.1| hypothetical protein EUTSA_v10003932mg [Eutrema salsugineum]
gi|557092495|gb|ESQ33142.1| hypothetical protein
EUTSA_v10003932mg [Eutrema salsugineum]
Length = 559
Score = 163 bits (413), Expect = 9e-38
Identities = 83/191 (43%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++EA QF S K P T NK +H L C +SLK L+Y +S+GYTPH S N
Sbjct: 1 MVREALQFISRLRKSSNLPDPITCNKYIHQLINSNCGVLSLKFLAYLLSRGYTPHRSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S S++C LG + A+ +V+S+ R G PD V+Y +LIDGH RN +I +A + +K + +
Sbjct: 61 SVASFVCKLGQVKFAEYIVHSMPRFGCLPDVVSYNSLIDGHCRNGEIRSASLVLKRLRAS 120
Query: 211 DNVV--PDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLD 38
+ PD+V+FN LF GF K M+KE+ YM +M K C PN TY T ID +CK G+L
Sbjct: 121 HGFMCRPDIVSFNSLFNGFSKMKMLKEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 37 KGLRVLRDMRK 5
L+ M+K
Sbjct: 181 LALKSFNCMKK 191
Score = 67.0 bits (162), Expect = 1e-08
Identities = 41/140 (29%), Positives = 65/140 (46%)
Frame = -2
Query: 463 SDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTA 284
+D ++K L+ +++G + + IS LC G L A +V + + GL PD + T
Sbjct: 284 ADNAMKFLAKMLNQGMRLDIAAYGVIISGLCGNGKLKEATEVVEDMEKGGLVPDKMILTT 343
Query: 283 LIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKV 104
++D +F++ + A + + PDVV L G K+G + E +AY
Sbjct: 344 MMDAYFKS-GLMKAALNVYREFIERGFEPDVVALTTLIDGLAKNGQLHEAIAYFCKE--- 399
Query: 103 CVPNDATYCTLIDVYCKIGD 44
ND Y LID CK GD
Sbjct: 400 -KANDVMYTVLIDALCKEGD 418
Score = 60.5 bits (145), Expect = 1e-06
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M+KE F + LK + P++ T++ + + ++LK + +P++ +
Sbjct: 144 MLKEVFVYMGVMLKCCS-PNVVTYSTWIDTFCKSGELQLALKSFNCMKKDALSPNVVTFT 202
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
I C G+L A +L + R+ +S + VTYTAL+DG + ++ A + +
Sbjct: 203 CLIDGYCKAGDLEVAVSLYEDMRRVQMSLNVVTYTALLDGFCKRGEMERA-EGLYSRMHE 261
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPND-ATYCTLIDVYCKIGDLDK 35
D V P+ + + + G+ G + +++ M + D A Y +I C G L +
Sbjct: 262 DKVEPNSLVYTTIIDGYFHKGDADNAMKFLAKMLNQGMRLDIAAYGVIISGLCGNGKLKE 321
Query: 34 GLRVLRDMRKG 2
V+ DM KG
Sbjct: 322 ATEVVEDMEKG 332
Score = 59.7 bits (143), Expect = 2e-06
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 1/206 (0%)
Frame = -2
Query: 628 WSPWSKHFAAGQPLHLS*IMIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISL 449
+S W F L L A + F+ K P++ TF + + ++++
Sbjct: 166 YSTWIDTFCKSGELQL-------ALKSFNCMKKDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 448 KLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGH 269
L + ++ + + + C G + A+ L + + + P+++ YT +IDG+
Sbjct: 219 SLYEDMRRVQMSLNVVTYTALLDGFCKRGEMERAEGLYSRMHEDKVEPNSLVYTTIIDGY 278
Query: 268 FRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKV-CVPN 92
F D NA + +++ N + D+ + V+ G C +G +KE + M K VP+
Sbjct: 279 FHKGDADNAMKFLAKML-NQGMRLDIAAYGVIISGLCGNGKLKEATEVVEDMEKGGLVPD 337
Query: 91 DATYCTLIDVYCKIGDLDKGLRVLRD 14
T++D Y K G + L V R+
Sbjct: 338 KMILTTMMDAYFKSGLMKAALNVYRE 363
>ref|XP_010275860.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
[Nelumbo nucifera] gi|720064141|ref|XP_010275861.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g01740 [Nelumbo nucifera]
gi|720064145|ref|XP_010275862.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g01740
[Nelumbo nucifera]
Length = 546
Score = 162 bits (411), Expect = 2e-37
Identities = 83/187 (44%), Positives = 111/187 (59%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M ++ +FFS + FP T NK LH + C D+SLK+L IS+GYTPHL S N
Sbjct: 1 MTRKVLEFFSGLRRNARFPDSWTCNKLLHQIITSNCGDLSLKILFDMISRGYTPHLSSCN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S + C +GNL SA+ L+ + + PD V+Y L+DG+ R D+ A + M I
Sbjct: 61 SIVGLFCKMGNLKSAEWLMKLMPSIRCVPDIVSYNCLVDGYSRVGDLEGASLIMNRI-RR 119
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
PD+VTFN+ GFCK GM KE Y+ LMWK +P+ TY TLID++CK+G+LD G
Sbjct: 120 GGCKPDLVTFNIFINGFCKLGMQKEAFVYLGLMWKCYLPSVTTYSTLIDMFCKLGNLDMG 179
Query: 31 LRVLRDM 11
V RDM
Sbjct: 180 YAVFRDM 186
Score = 75.1 bits (183), Expect = 4e-11
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 1/172 (0%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNL 338
P L TFN ++ + + L + K Y P + + ++ I C LGNL+ +
Sbjct: 124 PDLVTFNIFINGFCKLGMQKEAFVYLG-LMWKCYLPSVTTYSTLIDMFCKLGNLDMGYAV 182
Query: 337 VNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFC 158
++ +SP+ VT+T LIDGH +N + A + E + ++ P+VVT+ + G C
Sbjct: 183 FRDMTNSEISPNLVTFTCLIDGHCKNGSLEIA-FELYEKMFKLSLTPNVVTYTAMIDGLC 241
Query: 157 KDGMVKELLAYMSLMWKVCV-PNDATYCTLIDVYCKIGDLDKGLRVLRDMRK 5
K GM++ M + + PN ATY ++ID + K G +D ++ + M +
Sbjct: 242 KCGMLERADRLFERMLEDGIRPNPATYTSMIDGHFKKGSMDSAMKYVARMHE 293
Score = 68.6 bits (166), Expect = 4e-09
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGY----TPHLFSVNSAISYLCNLGNLNS 350
P+L TF CL C + SL++ K + TP++ + + I LC G L
Sbjct: 193 PNLVTFT----CLIDGHCKNGSLEIAFELYEKMFKLSLTPNVVTYTAMIDGLCKCGMLER 248
Query: 349 AQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEI--VCNDNVVPDVVTFNV 176
A L + G+ P+ TYT++IDGHF+ + +A MK + + + DV + V
Sbjct: 249 ADRLFERMLEDGIRPNPATYTSMIDGHFKKGSMDSA---MKYVARMHEQGIRLDVAAYGV 305
Query: 175 LFRGFCKDGMVKELLAYMSLM-WKVCVPNDATYCTLIDVYCKIGDLDKGLRVLRDM 11
+ G C G + + + M K P++ T ID Y K G++ L + R+M
Sbjct: 306 VIWGMCSKGRLGDAIEIKEKMERKGLKPDEIILTTFIDAYFKCGNVKAALDIYREM 361
Score = 66.2 bits (160), Expect = 2e-08
Identities = 51/187 (27%), Positives = 83/187 (44%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M++ A + F L+ P+ T+ + + D ++K ++ +G + +
Sbjct: 245 MLERADRLFERMLEDGIRPNPATYTSMIDGHFKKGSMDSAMKYVARMHEQGIRLDVAAYG 304
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
I +C+ G L A + + R GL PD + T ID +F+ ++ A +E+V +
Sbjct: 305 VVIWGMCSKGRLGDAIEIKEKMERKGLKPDEIILTTFIDAYFKCGNVKAALDIYREMV-D 363
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYCKIGDLDKG 32
DVVT + L G K G +E Y S N TY LID CK G+LD+
Sbjct: 364 RGFDLDVVTASTLMDGLSKQGFFQEARGYFSKE----KANKITYTVLIDGLCKQGNLDEV 419
Query: 31 LRVLRDM 11
V R+M
Sbjct: 420 EVVFREM 426
>ref|XP_009114220.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
[Brassica rapa]
Length = 557
Score = 160 bits (404), Expect = 1e-36
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 8/197 (4%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M+ EA QF S K +FP TFNK +H L C +SLKL++Y +S+GYTPH S N
Sbjct: 1 MVGEALQFLSRLRKSSSFPDPLTFNKHIHRLIDSSCGVLSLKLVAYLVSRGYTPHRSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEI--- 221
S +S LC G + A+++V ++ + G PD V+Y +LIDG+ RN D+ NA + + +
Sbjct: 61 SIVSLLCRSGQVKFAEDIVRAMRKFGSLPDVVSYNSLIDGYCRNGDVGNASLVFERLRRV 120
Query: 220 -----VCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKVCVPNDATYCTLIDVYC 56
+C PDVV+FN LF GF K M+ E+ YM +M+K C PN TY T ID +C
Sbjct: 121 PDGLFICR----PDVVSFNSLFNGFGKRKMLVEVFVYMGVMFKCCSPNVVTYTTWIDSFC 176
Query: 55 KIGDLDKGLRVLRDMRK 5
K G+L+ L+ R M++
Sbjct: 177 KSGELESALKSFRFMKR 193
Score = 70.1 bits (170), Expect = 1e-09
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Frame = -2
Query: 415 TPHLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACV 236
+P++ + + I C G L SA + R GL+P+ VT+T LIDG+ ++ + V
Sbjct: 162 SPNVVTYTTWIDSFCKSGELESALKSFRFMKRDGLAPNVVTFTCLIDGYCKSGGL-EVAV 220
Query: 235 TMKEIVCNDNVVPDVVTFNVLFRGFCKDG-MVKELLAYMSLMWKVCVPNDATYCTLIDVY 59
++ E + + +VVT++ L GFCK G M + + Y+ + PN Y ID Y
Sbjct: 221 SLYEEMREVGMSINVVTYSALIDGFCKQGEMQRGVELYLQMREDGVEPNSLVYTAFIDGY 280
Query: 58 CKIGDLDKGLRVLRDM 11
K GD D ++ L M
Sbjct: 281 FKNGDADNAMKFLAKM 296
Score = 67.8 bits (164), Expect = 7e-09
Identities = 39/140 (27%), Positives = 69/140 (49%)
Frame = -2
Query: 463 SDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTA 284
+D ++K L+ +++G + +S LC +G + A +V+ + + GL PD + T
Sbjct: 286 ADNAMKFLAKMLNQGMKLDTAAYGVIVSGLCGIGRVKEAAEVVDDMEKGGLVPDEMILTT 345
Query: 283 LIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWKV 104
+++G+F++ + +A E V PDVV + G K+G + E +AY
Sbjct: 346 MMNGYFKSGRVKDAVKVYGEFV-ERGFEPDVVALSTFIDGLAKNGRLHEAVAYFCKE--- 401
Query: 103 CVPNDATYCTLIDVYCKIGD 44
ND Y +ID CK+GD
Sbjct: 402 -RANDVMYTVVIDALCKVGD 420
Score = 60.1 bits (144), Expect = 1e-06
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLNSAQNL 338
P++ T+ + + + +LK + G P++ + I C G L A +L
Sbjct: 163 PNVVTYTTWIDSFCKSGELESALKSFRFMKRDGLAPNVVTFTCLIDGYCKSGGLEVAVSL 222
Query: 337 VNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVLFRGFC 158
+ +G+S + VTY+ALIDG + ++ V + + D V P+ + + G+
Sbjct: 223 YEEMREVGMSINVVTYSALIDGFCKQGEMQRG-VELYLQMREDGVEPNSLVYTAFIDGYF 281
Query: 157 KDGMVKELLAYMSLMWKVCVPND-ATYCTLIDVYCKIGDLDKGLRVLRDMRKG 2
K+G + +++ M + D A Y ++ C IG + + V+ DM KG
Sbjct: 282 KNGDADNAMKFLAKMLNQGMKLDTAAYGVIVSGLCGIGRVKEAAEVVDDMEKG 334
Score = 60.1 bits (144), Expect = 1e-06
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Frame = -2
Query: 568 IKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVNS 389
++ A + F + P++ TF + + ++++ L G + ++ + ++
Sbjct: 181 LESALKSFRFMKRDGLAPNVVTFTCLIDGYCKSGGLEVAVSLYEEMREVGMSINVVTYSA 240
Query: 388 AISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCND 209
I C G + L + G+ P+++ YTA IDG+F+N D NA + +++ N
Sbjct: 241 LIDGFCKQGEMQRGVELYLQMREDGVEPNSLVYTAFIDGYFKNGDADNAMKFLAKML-NQ 299
Query: 208 NVVPDVVTFNVLFRGFCKDGMVKELLAYMSLMWK-VCVPNDATYCTLIDVYCKIGDLDKG 32
+ D + V+ G C G VKE + M K VP++ T+++ Y K G +
Sbjct: 300 GMKLDTAAYGVIVSGLCGIGRVKEAAEVVDDMEKGGLVPDEMILTTMMNGYFKSGRVKDA 359
Query: 31 LRV 23
++V
Sbjct: 360 VKV 362
>emb|CDY04100.1| BnaA09g18780D [Brassica napus]
Length = 459
Score = 142 bits (359), Expect = 2e-31
Identities = 75/191 (39%), Positives = 110/191 (57%), Gaps = 2/191 (1%)
Frame = -2
Query: 571 MIKEAFQFFSHHLKRRTFPHLPTFNKSLHCLTRYRCSDISLKLLSYFISKGYTPHLFSVN 392
M+ EA QF S K +FP TFNK +H L C +SLKL++Y +S+GYTPH S N
Sbjct: 1 MVGEALQFLSRLRKSSSFPDPLTFNKHIHRLIDSSCGVLSLKLVAYLVSRGYTPHRSSFN 60
Query: 391 SAISYLCNLGNLNSAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCN 212
S +S LC G + A+++V ++ + G PD V+Y +LIDG+ RN D+ NA + + +
Sbjct: 61 SIVSLLCRSGQVKFAEDIVRAMPKFGSLPDVVSYNSLIDGYCRNGDVGNASLVFERLRRR 120
Query: 211 DNVVPDVVTFNVLFRGFCKDGMVKELLA--YMSLMWKVCVPNDATYCTLIDVYCKIGDLD 38
D + P+VVTF L G+CK G+ E+ Y + N TY LID +CK G++
Sbjct: 121 DGLAPNVVTFTCLIDGYCKSGVGLEVAVSLYEEMREVGMSINVVTYSALIDGFCKQGEMQ 180
Query: 37 KGLRVLRDMRK 5
+G + MR+
Sbjct: 181 RGEELYLQMRE 191
Score = 61.2 bits (147), Expect = 6e-07
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Frame = -2
Query: 517 PHLPTFNKSLHCLTRYRCS-----DISLKLLSYFISKGYTPHLFSVNSAISYLCNLGNLN 353
P++ TF CL C ++++ L G + ++ + ++ I C G +
Sbjct: 125 PNVVTFT----CLIDGYCKSGVGLEVAVSLYEEMREVGMSINVVTYSALIDGFCKQGEMQ 180
Query: 352 SAQNLVNSISRLGLSPDTVTYTALIDGHFRNLDITNACVTMKEIVCNDNVVPDVVTFNVL 173
+ L + G+ P+++ YTA IDG+F+N D NA + +++ N + D + V+
Sbjct: 181 RGEELYLQMREDGVEPNSLVYTAFIDGYFKNGDADNAMKFLAKLL-NQGMKLDTAAYGVI 239
Query: 172 FRGFCKDGMVKELLAYMSLMWK-VCVPNDATYCTLIDVYCKIGDLDKGLRV 23
G C G VKE + M K VP++ T+++ Y K G + ++V
Sbjct: 240 VSGLCGIGRVKEAAEVVDDMEKGGLVPDEMILTTMMNGYFKSGRVKDAVKV 290