BLASTX nr result
ID: Forsythia22_contig00016150
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00016150
(1936 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-... 65 8e-24
gb|KEH41604.1| DUF223 domain protein [Medicago truncatula] 84 2e-21
ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 87 1e-18
ref|XP_009770498.1| PREDICTED: replication protein A 70 kDa DNA-... 49 1e-18
ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding sub... 79 2e-18
ref|XP_010668249.1| PREDICTED: replication protein A 70 kDa DNA-... 68 4e-18
ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214... 64 2e-17
ref|XP_003611977.1| Replication factor A protein [Medicago trunc... 82 3e-17
ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 72 7e-17
ref|XP_009758715.1| PREDICTED: uncharacterized protein LOC104211... 80 9e-17
ref|XP_009788209.1| PREDICTED: uncharacterized protein LOC104236... 74 2e-16
ref|XP_009759827.1| PREDICTED: uncharacterized protein LOC104212... 75 2e-16
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1... 70 2e-16
ref|XP_009625567.1| PREDICTED: uncharacterized protein LOC104116... 74 2e-16
ref|XP_010913309.1| PREDICTED: uncharacterized protein LOC105039... 94 3e-16
ref|XP_003626023.1| Replication factor A protein [Medicago trunc... 81 3e-16
ref|XP_009801295.1| PREDICTED: replication protein A 70 kDa DNA-... 47 3e-16
gb|KEH33752.1| DUF223 domain protein [Medicago truncatula] 80 9e-16
ref|XP_010905729.1| PREDICTED: uncharacterized protein LOC105032... 90 7e-15
ref|XP_012833368.1| PREDICTED: uncharacterized protein LOC105954... 53 1e-14
>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
partial [Nicotiana sylvestris]
Length = 244
Score = 65.5 bits (158), Expect(3) = 8e-24
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +2
Query: 1313 QVGSCWVVATIIAIESDQDWWYLSCKLCSKKVNPVGKRFYCEKCDKTDFNGTPR 1474
Q G W+VAT++ + +++W YL CK CSKKV+ +G +F+C+KCD+ D + T R
Sbjct: 17 QEGHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGSKFHCKKCDRLDSSVTHR 70
Score = 48.1 bits (113), Expect(3) = 8e-24
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = +3
Query: 1713 NEIMILTYKIYQNCDDGCYPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDL 1892
NEI I T + C YP E+ ++++K+LFKV +K I H ++Y V+++++ +L
Sbjct: 105 NEISIETSAVADECS---YPVELYDILDKKVLFKVTVKSSIIKVHAEVYNVVKISEDDNL 161
Query: 1893 ISKYGSRGSNE 1925
I +Y ++
Sbjct: 162 IQQYSQPAQDD 172
Score = 47.0 bits (110), Expect(3) = 8e-24
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 1552 RFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRD 1662
R+K RV+V+D TG S LLWDRE L+GK+A+E+ +
Sbjct: 70 RYKFRVQVMDHTGFISLLLWDREATSLIGKSANELNE 106
>gb|KEH41604.1| DUF223 domain protein [Medicago truncatula]
Length = 334
Score = 84.3 bits (207), Expect(2) = 2e-21
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +3
Query: 78 QGSRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVE 257
QG I A+V++ L+P FK +GS+Y + +V N+ FKTT HKYKLN M T + +
Sbjct: 9 QGVTIHASVRKHLLPQFKDQFEKGSIYVIEKLMVAQNDPTFKTTPHKYKLNLMGGTTIFK 68
Query: 258 ISDNN-FPSSNYMFKSFGELLGAEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIR 434
+ D+N P ++ F +F +++ ++ + D+I
Sbjct: 69 LKDSNEIPKRHFQFMTFVDIMNCHKEDRLI--------------------------DVIG 102
Query: 435 EIVGKDSAKFQESCGRTNKLIDVVIEDLE 521
+V KD K E G+TNK++D +EDL+
Sbjct: 103 HVVEKDELKVTEKNGKTNKVMDATLEDLD 131
Score = 48.1 bits (113), Expect(2) = 2e-21
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = +1
Query: 619 NKLPCTLWGDYVDMVNNFLESQQTE-PIIIVLQMCRAKRYRGDXXXXXXXXXXRFLESLI 795
N++ CTLW DY + + FLES P +I++QMC+ K+Y
Sbjct: 133 NRIHCTLWDDYAEQLKRFLESHDPNLPAVILIQMCKLKKY-------------------- 172
Query: 796 HIRFXXXXXXXXXTGEIRICNTYYITKLLLNAPIKEVNDFRNR 924
G + I N +Y TKLL + + EV + R
Sbjct: 173 -------------FGAMGISNAFYGTKLLFDVELPEVASYLER 202
>ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 604
Score = 87.0 bits (214), Expect(2) = 1e-18
Identities = 51/154 (33%), Positives = 85/154 (55%)
Frame = +3
Query: 87 RIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVEISD 266
+IQ TVK+ LIPM K+++ EG+ Y + N +V N+ K+ TT HK++L+F+ KTK +I
Sbjct: 53 KIQLTVKKHLIPMIKSVVEEGAAYMLDNVLVTRNDPKYGTTNHKWRLDFLHKTKFNKIEA 112
Query: 267 NNFPSSNYMFKSFGELLGAEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIREIVG 446
N P +++ F SF E+L ++ +E + D+I +V
Sbjct: 113 LNIPQNHFDFVSFAEILDSDREERII--------------------------DVIGHVVE 146
Query: 447 KDSAKFQESCGRTNKLIDVVIEDLE*VNNFDLHC 548
+D K +E GRT+KL+D+ ++D E + +HC
Sbjct: 147 RDVMKDKEVNGRTSKLLDLTLQDSE---SRRIHC 177
Score = 35.8 bits (81), Expect(2) = 1e-18
Identities = 18/102 (17%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 622 KLPCTLWGDYVDMVNNFLESQQTE-PIIIVLQMCRAKRYRGDXXXXXXXXXXRFLESLIH 798
++ C+LW Y + + +F + + P+I+++Q C+ K Y
Sbjct: 174 RIHCSLWATYAERMTSFFATHEANSPVIVIMQQCKLKSY--------------------- 212
Query: 799 IRFXXXXXXXXXTGEIRICNTYYITKLLLNAPIKEVNDFRNR 924
+ + N +Y KL+++ I EV++++++
Sbjct: 213 ------------CSTMGVSNAFYGIKLIVDGDIAEVSEYKSK 242
Score = 43.1 bits (100), Expect(3) = 3e-11
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 1331 VVATIIAIESDQDWWYLSCKLCSKKVNPVGKRFYCEKCDKTDFNGTPR 1474
V+AT+ IE + +W+Y +C C+ +V + R +C KC+ T N PR
Sbjct: 291 VLATVCDIEKEFNWYYQACTKCAGRVKTIAGRLFCPKCN-TGRNAVPR 337
Score = 38.1 bits (87), Expect(3) = 3e-11
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +1
Query: 1552 RFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEM 1656
RFK+ ++V+D TGS SF+L+DR +GK+ ++
Sbjct: 337 RFKVHLQVMDNTGSTSFILFDRNVSNYVGKSVQDL 371
Score = 36.2 bits (82), Expect(3) = 3e-11
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +3
Query: 1746 QNCDDGCYPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKY 1904
+N DD +PAE +T +++LFKV++ NI + Y+V ++T D+I ++
Sbjct: 379 KNADD--FPAEFDTFYGKQMLFKVEVAEGNIVHNWRSYSVKQVTADLDMIKRF 429
>ref|XP_009770498.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana sylvestris]
Length = 339
Score = 48.9 bits (115), Expect(3) = 1e-18
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +2
Query: 1328 WVVATIIAIESDQDWWYLSCKLCSKKVNPVGKRFYCEKCDKTD 1456
W+ A ++ ++ + W YL C C++KV VG +F C+KC++ D
Sbjct: 86 WIAAKLVNLKLQRGWSYLGCNKCTRKVEKVGNKFLCKKCNEED 128
Score = 47.4 bits (111), Expect(3) = 1e-18
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +1
Query: 1552 RFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRDNLDKAS 1680
R++L+VRV+D T S LLW+RE QL+GK+A E+++ L + S
Sbjct: 134 RYRLQVRVMDRTTFISLLLWNREAQQLIGKSAKELKEGLVETS 176
Score = 46.2 bits (108), Expect(3) = 1e-18
Identities = 17/49 (34%), Positives = 34/49 (69%)
Frame = +3
Query: 1758 DGCYPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKY 1904
D YP E++ ++++K +FKV +K NI +++Y V+++T+ DL+ +Y
Sbjct: 181 DYSYPGELDDILDKKFMFKVIVKQTNIESQDEVYQVVKVTNDDDLLKEY 229
>ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|358347930|ref|XP_003638003.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|657405480|gb|KEH43961.1| replication
factor-A carboxy-terminal domain protein [Medicago
truncatula]
Length = 566
Score = 78.6 bits (192), Expect(2) = 2e-18
Identities = 42/145 (28%), Positives = 77/145 (53%)
Frame = +3
Query: 87 RIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVEISD 266
+IQA+ K+ L+P ++ + EGS YD+ N +V N+ K++ T+H++KLN + TK +I
Sbjct: 53 KIQASAKKHLVPRIRSNVEEGSTYDIENVLVTKNDPKYQVTQHRFKLNLIDNTKFFKIDA 112
Query: 267 NNFPSSNYMFKSFGELLGAEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIREIVG 446
P +++ F F E+L AE +E + D+I ++V
Sbjct: 113 ATIPLNHFDFMPFNEILEAEREEKVV--------------------------DVIGQVVE 146
Query: 447 KDSAKFQESCGRTNKLIDVVIEDLE 521
+D K ++ GR +K++D+ ++D E
Sbjct: 147 RDELKERDVNGRRSKIMDLTLQDSE 171
Score = 43.9 bits (102), Expect(2) = 2e-18
Identities = 15/41 (36%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +1
Query: 622 KLPCTLWGDYVDMVNNFLESQQ-TEPIIIVLQMCRAKRYRG 741
++ CTLW +Y + +N+FL + + P+I+++Q C+ K+Y+G
Sbjct: 174 RVHCTLWANYAERMNSFLAAHDPSSPVIVLIQQCKLKKYQG 214
Score = 47.8 bits (112), Expect(3) = 5e-13
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +2
Query: 1331 VVATIIAIESDQDWWYLSCKLCSKKVNPVGKRFYCEKCDKTDFNGTPR 1474
V+ATI IES+ W+Y +C C+ +V V R YC KC+ T N PR
Sbjct: 291 VLATICGIESEYSWYYQACTKCAGRVRTVAGRLYCGKCN-TGRNAVPR 337
Score = 40.8 bits (94), Expect(3) = 5e-13
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 1552 RFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRD 1662
RFKL V+V+D TGS SF+L+DR + +T +M D
Sbjct: 337 RFKLHVQVMDNTGSTSFILFDRNVSSYVNRTVQDMID 373
Score = 35.0 bits (79), Expect(3) = 5e-13
Identities = 14/46 (30%), Positives = 31/46 (67%)
Frame = +3
Query: 1767 YPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKY 1904
YP+++++ V +++LFKV++ N+ + Y V R T + D+I+++
Sbjct: 382 YPSDLDSFVGKRMLFKVEVSDGNLLHNWRNYAVKRTTAEEDVINQF 427
>ref|XP_010668249.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like,
partial [Beta vulgaris subsp. vulgaris]
Length = 511
Score = 48.9 bits (115), Expect(3) = 4e-18
Identities = 22/43 (51%), Positives = 35/43 (81%)
Frame = +1
Query: 1546 LIRFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRDNLDK 1674
L RFK++VRV+DG+GSASF+++DRE ++ K+AS++ +L K
Sbjct: 357 LPRFKIQVRVVDGSGSASFVMFDREVKSIVHKSASDVNVSLTK 399
Score = 46.2 bits (108), Expect(3) = 4e-18
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 18/72 (25%)
Frame = +2
Query: 1325 CWVVATIIAIESDQDWWYLSCKLCSKKVNPVGK------------------RFYCEKCDK 1450
C +ATI+ ++ + W+YL+CK C+KKV G+ ++YC+KC K
Sbjct: 292 CITLATIVCVQFEYGWFYLACKKCNKKVVVEGEIKTECDGDQSDNGTTKVTKWYCKKCSK 351
Query: 1451 TDFNGTPR*NIQ 1486
N PR IQ
Sbjct: 352 LVENVLPRFKIQ 363
Score = 45.8 bits (107), Expect(3) = 4e-18
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 1755 DDGCYPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKY--GSRGSNE 1925
D YP E+ LV R+ LFKV++ N+ ++ +YTV+++TD ++I + S G E
Sbjct: 402 DSETYPEELNALVNRRFLFKVEVSEYNLTQNWPVYTVVKMTDNENIIESFLNSSTGDQE 460
Score = 68.2 bits (165), Expect = 2e-08
Identities = 34/89 (38%), Positives = 50/89 (56%)
Frame = +3
Query: 78 QGSRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVE 257
+G +IQA VK+ LI F L+ EG L ++NF V NN ++ T H YK+NF+ T+V
Sbjct: 51 KGDKIQAIVKKLLIRRFSHLLAEGQLRVINNFGVAQNNGSYRLTSHPYKINFLLNTRVQN 110
Query: 258 ISDNNFPSSNYMFKSFGELLGAEVDENKL 344
D P F SF +++ +D+N L
Sbjct: 111 CDDLPIPLHGLNFASFDDIISNRLDDNIL 139
>ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214830 [Nicotiana
sylvestris]
Length = 213
Score = 64.3 bits (155), Expect(3) = 2e-17
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +2
Query: 1316 VGSCWVVATIIAIESDQDWWYLSCKLCSKKVNPVGKRFYCEKCDK 1450
+G+ WVVATII +E D+ W YL+CK CSKK+ G +FYC+KC++
Sbjct: 85 LGNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 129
Score = 45.4 bits (106), Expect(3) = 2e-17
Identities = 16/37 (43%), Positives = 32/37 (86%)
Frame = +1
Query: 1552 RFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRD 1662
R++L+V+V+D TG+ S LLWD++ +++GK+A++++D
Sbjct: 136 RYRLQVKVMDCTGTISLLLWDKDATKIIGKSANDLKD 172
Score = 29.3 bits (64), Expect(3) = 2e-17
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 1713 NEIMILTYKIYQNCDDGCYPAEIETLVERKILFKVQIKVPNI 1838
N++ + ++ DD P EIE +VE+ K+++ VP I
Sbjct: 168 NDLKDVVFETSGAADDSSCPMEIENIVEKGSCLKLRLTVPTI 209
>ref|XP_003611977.1| Replication factor A protein [Medicago truncatula]
gi|358344381|ref|XP_003636268.1| Replication factor A
protein [Medicago truncatula]
gi|355513312|gb|AES94935.1| DUF223 domain protein
[Medicago truncatula]
Length = 248
Score = 82.4 bits (202), Expect(2) = 3e-17
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Frame = +3
Query: 87 RIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVEI-S 263
+I ATV++SL+ F+ I E SLY++ ++G+N FK T+HKYK+ M ++ ++I +
Sbjct: 59 KIHATVRKSLVKSFQAKISERSLYELEQIMIGFNEGPFKLTRHKYKITMMQNSRWIKIQN 118
Query: 264 DNNFPSSNYMFKSFGELLGAEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIREIV 443
+ N P +N+ F+SF +L + V+E + D+I IV
Sbjct: 119 ETNIPLNNFDFQSFESILASTVEEKIV--------------------------DVIGHIV 152
Query: 444 GKDSAKFQESCGRTNKLIDVVIEDLE*VNNFDLHC 548
KD+ + E R + +ID+ +EDLE N HC
Sbjct: 153 EKDALRETEKNCRKSGVIDLTLEDLE---NRQFHC 184
Score = 35.8 bits (81), Expect(2) = 3e-17
Identities = 19/98 (19%), Positives = 38/98 (38%)
Frame = +1
Query: 631 CTLWGDYVDMVNNFLESQQTEPIIIVLQMCRAKRYRGDXXXXXXXXXXRFLESLIHIRFX 810
C+LWG+Y D ++E I++Q C+ + Y
Sbjct: 184 CSLWGNYTDKFLQYMEGYDMSTPAILMQYCKQQNY------------------------- 218
Query: 811 XXXXXXXXTGEIRICNTYYITKLLLNAPIKEVNDFRNR 924
G +R+ N+++ T L++N E D++++
Sbjct: 219 --------VGMMRVSNSFFGTNLIINGDYPEFADYKSK 248
>ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 637
Score = 72.0 bits (175), Expect(2) = 7e-17
Identities = 40/145 (27%), Positives = 73/145 (50%)
Frame = +3
Query: 87 RIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVEISD 266
+IQA+ K+ +P ++ + EGS YD N +V N+ K++ T+H +KLN + KTK +
Sbjct: 53 KIQASTKKHWVPRIRSNVEEGSTYDNENVLVTKNDPKYQVTQHSFKLNLIDKTKFFKFDA 112
Query: 267 NNFPSSNYMFKSFGELLGAEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIREIVG 446
P +++ F F E+L A+ +E + D+I + V
Sbjct: 113 TTIPLNHFDFMPFNEILEAKREEKVV--------------------------DVIGQAVE 146
Query: 447 KDSAKFQESCGRTNKLIDVVIEDLE 521
+D K ++ GR +K++D+ ++D E
Sbjct: 147 RDELKEKDVNGRRSKIMDLTLQDFE 171
Score = 45.1 bits (105), Expect(2) = 7e-17
Identities = 16/48 (33%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 601 LSIFRKNKLPCTLWGDYVDMVNNFLESQQ-TEPIIIVLQMCRAKRYRG 741
L F ++ CTLW +Y + +N+FL + + P+++++Q C+ K+Y+G
Sbjct: 167 LQDFESRRVRCTLWANYAERMNSFLVAHDPSSPVVVLIQHCKLKKYQG 214
Score = 43.9 bits (102), Expect(3) = 1e-10
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 1331 VVATIIAIESDQDWWYLSCKLCSKKVNPVGKRFYCEKCD 1447
V+ATI IES+ W+Y +C C +V V R YC KC+
Sbjct: 240 VLATICGIESEYSWYYQTCTKCVGRVRTVAGRLYCGKCN 278
Score = 38.5 bits (88), Expect(3) = 1e-10
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 1555 FKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRD 1662
FKL V+V+D TGS SF+L+DR + +T +M D
Sbjct: 287 FKLHVQVMDNTGSTSFILFDRNVSNYVNRTIQDMID 322
Score = 32.7 bits (73), Expect(3) = 1e-10
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +3
Query: 1767 YPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKY 1904
YP++ ++ V ++LFKV++ N+ + Y V R T + D+I+++
Sbjct: 331 YPSDFDSFVGNQMLFKVEVSDGNLLHNWRNYAVKRTTVEEDVINQF 376
>ref|XP_009758715.1| PREDICTED: uncharacterized protein LOC104211371 [Nicotiana
sylvestris]
Length = 230
Score = 80.5 bits (197), Expect(2) = 9e-17
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +3
Query: 78 QGSRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVE 257
+G RI AT+ R+++ +FK I E LY + NF+VG NN+K KT KHK KL F + E
Sbjct: 64 EGDRIHATIGRAVLRIFKIKIHEMKLYVMKNFMVGPNNLKIKTNKHKLKLAFSHRASADE 123
Query: 258 ISDNNFPSSNYMFKSFGELLG-AEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIR 434
ISD F + + FK + EVDEN+LF D+I
Sbjct: 124 ISDPRFSLNIFNFKPYEHPTNQLEVDENELF-------------------------DVIG 158
Query: 435 EIVGKDSAKFQESCGRTNKLIDVVIEDLE 521
E++G + + G+T+ +++ +ED E
Sbjct: 159 EVIGHGTVELYNQGGKTSTFMNLELEDHE 187
Score = 36.2 bits (82), Expect(2) = 9e-17
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +1
Query: 616 KNKLPCTLWGDYVDMVNNFLESQQTEPIIIVLQMCRA 726
+N + LWG++VD + L+ +P+I+V+Q+ +A
Sbjct: 188 RNNISAALWGEFVDEILPHLDGSPNQPVIVVIQLIKA 224
>ref|XP_009788209.1| PREDICTED: uncharacterized protein LOC104236062, partial [Nicotiana
sylvestris]
Length = 164
Score = 74.3 bits (181), Expect(2) = 2e-16
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Frame = +3
Query: 81 GSRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVEI 260
G I A++ + ++ +FKT I E LY+++NF+V +N KF TTKH+ +L F +T V E
Sbjct: 1 GDWISASIGKLVLHLFKTQIAELGLYNMANFIVCHNKEKFNTTKHRLRLTFTQRTTVAET 60
Query: 261 SDNNFPSSNYMFKSFGELLG-AEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIRE 437
+D FP + + +++ +L+ +V+E +LF D+I E
Sbjct: 61 TDPLFPMNIFDLRAYDQLITKVDVNETELF-------------------------DVIGE 95
Query: 438 IVGKDSAKFQESCGRTNKLIDVVIEDLE 521
IV + Q G + K +D+ +ED E
Sbjct: 96 IVNFSEVQTQNQGGISRKFMDIELEDDE 123
Score = 41.6 bits (96), Expect(2) = 2e-16
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 616 KNKLPCTLWGDYVDMVNNFLESQQTEPIIIVLQMCRAKRYR 738
+ KL T WG++VD + L S EPII+V+Q+ +A +Y+
Sbjct: 124 RKKLSATFWGEFVDEIVPHLLSANNEPIIVVMQLIKAHKYQ 164
>ref|XP_009759827.1| PREDICTED: uncharacterized protein LOC104212304 [Nicotiana
sylvestris]
Length = 639
Score = 75.1 bits (183), Expect(2) = 2e-16
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Frame = +3
Query: 78 QGSRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVE 257
+G I A++ +S++ +FKT I E LY+++NF+V +N KF TTKH+ +L F +T V E
Sbjct: 53 KGDHISASIGKSVLHLFKTQITELGLYNMANFIVCHNKEKFNTTKHRLRLTFTQRTTVAE 112
Query: 258 ISDNNFPSSNYMFKSFGELLG-AEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIR 434
+D FP + + + + +L+ +V + +LF D+I
Sbjct: 113 TTDPLFPINIFDLRPYDQLINKVDVKKTELF-------------------------DVIG 147
Query: 435 EIVGKDSAKFQESCGRTNKLIDVVIEDLE 521
EIV + Q G + K +D+ +ED E
Sbjct: 148 EIVNFSEVQTQNQGGISRKFMDIELEDDE 176
Score = 40.4 bits (93), Expect(2) = 2e-16
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 616 KNKLPCTLWGDYVDMVNNFLESQQTEPIIIVLQMCRAKRYR 738
+ KL T WG++VD + L S +PII+V+Q+ +A +Y+
Sbjct: 177 RKKLSATFWGEFVDEIVPHLLSANNQPIIVVMQLIKAHKYQ 217
Score = 55.5 bits (132), Expect(2) = 5e-14
Identities = 24/43 (55%), Positives = 36/43 (83%)
Frame = +1
Query: 1534 EHISLIRFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRD 1662
++ ++IR+KL+VRV+D TGS S LLWDRE M L+GK+A E+++
Sbjct: 340 DYSAVIRYKLQVRVMDTTGSVSLLLWDRETMFLIGKSAKELKE 382
Score = 52.0 bits (123), Expect(2) = 5e-14
Identities = 20/46 (43%), Positives = 35/46 (76%)
Frame = +3
Query: 1767 YPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKY 1904
YP E+ +++RK +FKV IK NI++ ++Y+V++LTD+ L++KY
Sbjct: 396 YPVELNNILQRKFMFKVIIKTENIHQQKEVYSVVKLTDEEQLMNKY 441
>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
vulgaris subsp. vulgaris]
Length = 2037
Score = 47.0 bits (110), Expect(3) = 2e-16
Identities = 20/39 (51%), Positives = 33/39 (84%)
Frame = +1
Query: 1552 RFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRDNL 1668
RFK++VRV+DG+GSASF+++DRE ++ K+AS++ +L
Sbjct: 318 RFKIQVRVVDGSGSASFVMFDREVKSIVHKSASDVNVSL 356
Score = 45.4 bits (106), Expect(3) = 2e-16
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 1755 DDGCYPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKY 1904
D YP E+ LV R+ LFKV++ N+ ++ +YTV+++TD ++I +
Sbjct: 361 DSETYPEELNALVNRRFLFKVEVSEYNLTQNWPVYTVVKMTDNENIIESF 410
Score = 42.7 bits (99), Expect(3) = 2e-16
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 1325 CWVVATIIAIESDQDWWYLSCKLCSKKVNPVGK-RFYCEKCDKTDFNGTPR*NIQSFWLT 1501
C +ATI+ ++ + W+YL+CK C+KKV G+ + C+ D++D NGT + L
Sbjct: 248 CITLATIVCVQFEYGWFYLACKKCNKKVVVEGEIKTECDG-DQSD-NGTTK-------LL 298
Query: 1502 ILHFLVDMILTNI 1540
I+ F VD+++ I
Sbjct: 299 IIPFGVDIVVNKI 311
Score = 69.7 bits (169), Expect = 8e-09
Identities = 35/91 (38%), Positives = 51/91 (56%)
Frame = +3
Query: 78 QGSRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVE 257
+G +IQA VK+ LI F L+ EG L ++NF V NN ++ T H YK+NF+ T+V
Sbjct: 81 KGDKIQAIVKKLLIRRFSHLLAEGQLRVINNFGVAQNNGSYRLTSHPYKINFLLNTRVQN 140
Query: 258 ISDNNFPSSNYMFKSFGELLGAEVDENKLFG 350
D P F SF +++ +D+N L G
Sbjct: 141 CDDLPIPLHGLNFASFDDIISNRLDDNILTG 171
>ref|XP_009625567.1| PREDICTED: uncharacterized protein LOC104116422 [Nicotiana
tomentosiformis]
Length = 470
Score = 73.9 bits (180), Expect(2) = 2e-16
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Frame = +3
Query: 84 SRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVEIS 263
+RIQA++ +S++ +FKT I E LY ++ F+V N +FK TKH +L F +T V EIS
Sbjct: 52 NRIQASIGKSVLHLFKTQINELELYVMAYFIVCQNKERFKITKHNLRLTFTQRTTVAEIS 111
Query: 264 DNNFPSSNYMFKSFGELLG-AEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIREI 440
D FP + + + + +L+ +VDE +LF D+I EI
Sbjct: 112 DPLFPMNIFDLRPYDQLINKVDVDETELF-------------------------DLIGEI 146
Query: 441 VGKDSAKFQESCGRTNKLIDVVIEDLE 521
V K G + K +++ +ED E
Sbjct: 147 VSFSEVKTHIQAGISTKFMNIELEDYE 173
Score = 41.2 bits (95), Expect(2) = 2e-16
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +1
Query: 601 LSIFRKNKLPCTLWGDYVDMVNNFLESQQTEPIIIVLQMCRAKRYR 738
L + +NKL T WG +VD + L + +PI++V+Q+ +A +++
Sbjct: 169 LEDYERNKLSATFWGKFVDQIVPHLLNSSNQPIVVVMQLIKAHKFQ 214
Score = 63.9 bits (154), Expect(2) = 8e-13
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Frame = +3
Query: 78 QGSRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVE 257
Q ++IQA + S +F +Y ++NF+V N +FKTTKH +L F +T V E
Sbjct: 284 QENQIQAFLLASQCCIFSKHKLMSLIYVMANFIVCQNKERFKTTKHNLRLTFTQRTTVAE 343
Query: 258 ISDNNFPSSNYMFKSFGELLG-AEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIR 434
ISD FP + + + + +L+ +VDE +LF D+I
Sbjct: 344 ISDPLFPMNIFDLRPYDQLINKVDVDETELF-------------------------DLIG 378
Query: 435 EIVGKDSAKFQESCGRTNKLIDVVIEDLE 521
EIVG K G + K +++ +ED E
Sbjct: 379 EIVGFSEVKTHIQAGISMKFMNIELEDDE 407
Score = 39.3 bits (90), Expect(2) = 8e-13
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 616 KNKLPCTLWGDYVDMVNNFLESQQTEPIIIVLQMCRAKRYRGD 744
+NKL WG++VD + L + +PII+V+Q+ +A +++ +
Sbjct: 408 RNKLSAIFWGEFVDQIVPHLLNSNNQPIIVVMQLIKAHKFQDE 450
>ref|XP_010913309.1| PREDICTED: uncharacterized protein LOC105039035 [Elaeis guineensis]
Length = 143
Score = 94.4 bits (233), Expect = 3e-16
Identities = 46/91 (50%), Positives = 63/91 (69%)
Frame = +3
Query: 78 QGSRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVE 257
+G +I AT+KR L+ MFK+++ EG Y +SNF+VGYNN K++TTKHKY LNFM KT VV
Sbjct: 51 RGGKIHATIKRQLLSMFKSILKEGVDYVMSNFIVGYNNGKYRTTKHKYMLNFMTKTSVVV 110
Query: 258 ISDNNFPSSNYMFKSFGELLGAEVDENKLFG 350
+ N P ++F SF E++ A+ DE G
Sbjct: 111 CAHANIPRDEFVFMSFAEIILAK-DETYFVG 140
>ref|XP_003626023.1| Replication factor A protein [Medicago truncatula]
gi|355501038|gb|AES82241.1| replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 526
Score = 81.3 bits (199), Expect(2) = 3e-16
Identities = 40/145 (27%), Positives = 78/145 (53%)
Frame = +3
Query: 87 RIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVEISD 266
+IQAT K++LIP ++L+ +G+ Y++ N +V +N ++++ T H++KLN + +TK +I
Sbjct: 53 KIQATAKKTLIPKIRSLVQDGAAYEIQNVLVAHNEIRYRCTGHRWKLNLIDQTKFTKIDC 112
Query: 267 NNFPSSNYMFKSFGELLGAEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIREIVG 446
N P ++ F F E+L + ++ + D+I +V
Sbjct: 113 NTIPEYHFEFVPFKEILESTKEDR--------------------------HVDVIGRVVE 146
Query: 447 KDSAKFQESCGRTNKLIDVVIEDLE 521
+DS K +E G+ + ++D+ +ED E
Sbjct: 147 RDSLKEKEVLGKKSMVLDITLEDTE 171
Score = 33.5 bits (75), Expect(2) = 3e-16
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 619 NKLPCTLWGDYVDMVNNFLESQQ-TEPIIIVLQMCRAKRY 735
N++ C+LW Y ++ +L P+I+V+ +C+ K+Y
Sbjct: 173 NRIHCSLWDTYAIRMDAYLTVHDPNSPVIVVIHLCKLKKY 212
Score = 43.9 bits (102), Expect(3) = 3e-14
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +3
Query: 1746 QNCDDGCYPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKYGSR 1913
Q +D YP++++ LV +K+LFKV+I N++ Y V R TD DLIS++ R
Sbjct: 377 QGNNDKGYPSDLDVLVGKKMLFKVEITDGNLHLSWRNYGVKRTTDDPDLISQFSKR 432
Score = 42.0 bits (97), Expect(3) = 3e-14
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +2
Query: 1331 VVATIIAIESDQDWWYLSCKLCSKKVNPVGKRFYCEKCDKTDFNGTPR 1474
V+A+II IE++ W+Y +C C+ ++ + R +C +C+++ N PR
Sbjct: 291 VLASIIGIEAEYSWYYDACTKCAGRIKIIAGRMFCPRCNQSR-NAVPR 337
Score = 42.0 bits (97), Expect(3) = 3e-14
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +1
Query: 1552 RFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRDN 1665
RFKL V+V+D TGS SF+L+DR +GK+ ++ D+
Sbjct: 337 RFKLHVQVMDNTGSTSFILFDRNVSNYVGKSVQDLIDS 374
>ref|XP_009801295.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana sylvestris]
Length = 307
Score = 47.4 bits (111), Expect(3) = 3e-16
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +1
Query: 1552 RFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRDNL 1668
R++L+VRV+D T S LLW+RE QL+GK+A E+++ L
Sbjct: 118 RYRLQVRVMDRTAFISLLLWNREAQQLIGKSAKELKEGL 156
Score = 45.8 bits (107), Expect(3) = 3e-16
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 1331 VVATIIAIESDQDWWYLSCKLCSKKVNPVGKRFYCEKCDKTD 1456
+ A ++ +E + W +L C C KKV VG +F+C+KC++ D
Sbjct: 71 IAAKLVNLELQRGWSHLGCNKCIKKVEKVGNKFFCKKCNEED 112
Score = 41.2 bits (95), Expect(3) = 3e-16
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 1758 DGCYPAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKY 1904
D YP+E++ ++++K +FKV +K NI + V+++TD DL +Y
Sbjct: 165 DCSYPSELDDILDKKFMFKVIVKQTNIESQDKACKVVKVTDDDDLQKEY 213
>gb|KEH33752.1| DUF223 domain protein [Medicago truncatula]
Length = 453
Score = 79.7 bits (195), Expect(2) = 9e-16
Identities = 40/145 (27%), Positives = 77/145 (53%)
Frame = +3
Query: 87 RIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVEISD 266
+IQAT K++LIP ++L+ +G Y++ N +V +N ++++ T H++KLN + +TK +I
Sbjct: 53 KIQATAKKTLIPKIRSLVQDGEAYEIQNVLVAHNEIRYRCTGHRWKLNMIDQTKFTKIDC 112
Query: 267 NNFPSSNYMFKSFGELLGAEVDENKLFGMLKVCIFLNFFYLTTYNIIR*LNADIIREIVG 446
N P ++ F F E+L + ++ + D+I +V
Sbjct: 113 NTIPVYHFEFVPFKEILESTKEDR--------------------------HVDVIGRVVE 146
Query: 447 KDSAKFQESCGRTNKLIDVVIEDLE 521
+DS K +E G+ + ++D+ +ED E
Sbjct: 147 RDSLKEKEVLGKKSMVLDITLEDSE 171
Score = 33.5 bits (75), Expect(2) = 9e-16
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 619 NKLPCTLWGDYVDMVNNFLESQQ-TEPIIIVLQMCRAKRY 735
N++ C+LW Y ++ +L P+I+V+ +C+ K+Y
Sbjct: 173 NRIHCSLWDTYAIRMDAYLTVHDPNSPVIVVIHLCKLKKY 212
>ref|XP_010905729.1| PREDICTED: uncharacterized protein LOC105032851 [Elaeis guineensis]
Length = 143
Score = 89.7 bits (221), Expect = 7e-15
Identities = 44/91 (48%), Positives = 61/91 (67%)
Frame = +3
Query: 78 QGSRIQATVKRSLIPMFKTLICEGSLYDVSNFVVGYNNMKFKTTKHKYKLNFMPKTKVVE 257
+G +I T+KR L+ MFK+++ EG Y +SNF+VGYNN K++TTKHKY LNFM KT VV
Sbjct: 51 RGGKIHTTIKRQLLSMFKSILKEGVDYVMSNFIVGYNNGKYRTTKHKYILNFMTKTSVVV 110
Query: 258 ISDNNFPSSNYMFKSFGELLGAEVDENKLFG 350
+ N P ++F F E++ A+ DE G
Sbjct: 111 CAHANIPRDGFVFVPFAEIILAK-DETYFVG 140
>ref|XP_012833368.1| PREDICTED: uncharacterized protein LOC105954240 [Erythranthe
guttatus]
Length = 266
Score = 53.1 bits (126), Expect(3) = 1e-14
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +2
Query: 1331 VVATIIAIESDQDWWYLSCKLCSKKVNPVGKRFYCEKCDKTDFNGTPR*NIQ 1486
++ATI I+ ++ WWY+SCK C KKV P G +++ ++CD+ D PR I+
Sbjct: 16 LLATIFEIDLEKRWWYISCKNCKKKVTPNGSKYFYKRCDR-DVPTIPRYRIE 66
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 1552 RFKLRVRVIDGTGSASFLLWDRECMQLLGKTASEMRDNLDKASI 1683
R+++ V ++D T S S +L+D Q +GK+ASE+ N+ K +
Sbjct: 62 RYRIEVTIVDSTSSTSLVLFDEMVKQFIGKSASEVVGNMKKEQL 105
Score = 37.0 bits (84), Expect(3) = 1e-14
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 1770 PAEIETLVERKILFKVQIKVPNINEHNDLYTVMRLTDKSDLISKYGS 1910
P E + LV ++ LFK+QI N+ ++ L TV +T+ + I K+ S
Sbjct: 110 PVEFQMLVNKEFLFKIQISEMNVKKNWSLSTVKTMTNDKEKIQKFKS 156