BLASTX nr result

ID: Forsythia22_contig00013406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00013406
         (671 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii]     49   7e-07
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    49   3e-06
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...    48   4e-06

>gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii]
          Length = 571

 Score = 49.3 bits (116), Expect(2) = 7e-07
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = +3

Query: 66  RISYHA*IVLNPYLFPLVVNEPTRHIEDEIHY-MLFVDSIVLVD--*TGRV*IIRLWSST 236
           +I  H    L+PYLF LV++E TR I+ +I + MLF D +VLVD   TG    + LW  T
Sbjct: 241 KIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGANRKLELWRQT 300

Query: 237 LKSKICRTEYAK 272
           L+SK  R    K
Sbjct: 301 LESKGFRLSRTK 312



 Score = 31.2 bits (69), Expect(2) = 7e-07
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 325 PKE*VLEAFGSIINLE*GLDKDVMHRIIASWLE 423
           PK+      GS++  + G+D+DV HR+ A W++
Sbjct: 338 PKKDTFRYLGSMLQEDGGIDEDVNHRVKAGWMK 370


>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score = 48.5 bits (114), Expect(2) = 3e-06
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = +3

Query: 66  RISYHA*IVLNPYLFPLVVNEPTRHIEDEIHY-MLFVDSIVLVD--*TGRV*IIRLWSST 236
           +I  H    L+PYLF LV++E TR I+ +I + MLF D +VLVD   TG    + LW  T
Sbjct: 226 KIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQT 285

Query: 237 LKSKICRTEYAK 272
           L+SK  R    K
Sbjct: 286 LESKGFRLSRTK 297



 Score = 29.6 bits (65), Expect(2) = 3e-06
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 325 PKE*VLEAFGSIINLE*GLDKDVMHRIIASWLE 423
           P++      GS++  + G+D+DV HRI A W++
Sbjct: 323 PRKDTFWYLGSLLQEDGGIDEDVNHRIKAGWMK 355


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score = 47.8 bits (112), Expect(2) = 4e-06
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = +3

Query: 66  RISYHA*IVLNPYLFPLVVNEPTRHIEDEIHY-MLFVDSIVLVD--*TGRV*IIRLWSST 236
           +I  H    L+PYLF L+++E TR I+ +I + MLF D +VLVD   TG    + LW  T
Sbjct: 510 KIGLHQGSALSPYLFALLMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQT 569

Query: 237 LKSKICRTEYAK 272
           L+SK  R    K
Sbjct: 570 LESKGLRLSRTK 581



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 325 PKE*VLEAFGSIINLE*GLDKDVMHRIIASWLE 423
           P++      GS++  + G+D+DV HRI A W++
Sbjct: 606 PQKDTFRYLGSMLQEDGGIDEDVNHRIKAGWMK 638


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