BLASTX nr result

ID: Forsythia22_contig00013104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00013104
         (789 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097333.1| PREDICTED: uncharacterized protein LOC105176...    77   1e-11
ref|XP_004231816.1| PREDICTED: histone H3.v1-like [Solanum lycop...    52   2e-06

>ref|XP_011097333.1| PREDICTED: uncharacterized protein LOC105176285 [Sesamum indicum]
          Length = 546

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 56/135 (41%), Positives = 71/135 (52%), Gaps = 16/135 (11%)
 Frame = +1

Query: 277 SKSLIARQNNLQSPPLSTPVIVPEE-----REQKFKEKFDAEEMP--------KEKTGRK 417
           SKSL A +N LQSP LSTP I+  E     R+QK +EKF+A EM         KEK G +
Sbjct: 382 SKSLTACRNRLQSPTLSTPFILRTEERAAKRKQKLEEKFNANEMQKAQLQKTLKEKAGNE 441

Query: 418 FRKEHRIFCFKA*YLQG---KRSMKASDEKESRGPTSVSVLGRTH*SKAHGTISVPPTPS 588
           FRK    FCFKA  L     +R    +  K++      +VLGR   +K  GTIS+PP P 
Sbjct: 442 FRKLGCGFCFKARPLPDFYKERETSVNQMKKTPARAQPAVLGRNISTKTRGTISMPPPPP 501

Query: 589 TSLVKTTPCPQNNIS 633
                 T  P+N +S
Sbjct: 502 ----PPTSLPKNRVS 512


>ref|XP_004231816.1| PREDICTED: histone H3.v1-like [Solanum lycopersicum]
          Length = 502

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 13/74 (17%)
 Frame = +1

Query: 271 SHSKSLIARQNNLQSPPLSTPVIVPEE-----REQKFKEKFDAEEMP--------KEKTG 411
           S SKS  A +N LQSP LSTP  +  E     R+QK +EKF+A+E          KEK G
Sbjct: 371 SVSKSFTAYRNKLQSPTLSTPFSLRTEERAARRKQKLEEKFNAKEEKKVQQQTTLKEKAG 430

Query: 412 RKFRKEHRIFCFKA 453
            + RK  + FCFKA
Sbjct: 431 TELRKLGQSFCFKA 444



 Score = 27.7 bits (60), Expect(2) = 2e-06
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = +2

Query: 452 PDIYKEREA*KHQMKKSPVAQPQSAY*EEPIEARHMAPY 568
           PD YKE E  K   KK PV Q        P+  R   PY
Sbjct: 448 PDFYKETETAKDHAKKIPVTQ-------APLPKRGRMPY 479


Top