BLASTX nr result
ID: Forsythia22_contig00012235
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00012235
(642 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 197 4e-48
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 185 1e-44
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera] 184 4e-44
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 182 1e-43
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 182 1e-43
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 181 2e-43
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 181 2e-43
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 180 5e-43
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 180 5e-43
ref|XP_010097937.1| Retrovirus-related Pol polyprotein from tran... 180 6e-43
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 178 2e-42
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 178 2e-42
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 177 4e-42
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 176 7e-42
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 176 9e-42
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 176 9e-42
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 176 1e-41
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 175 2e-41
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 175 2e-41
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 175 2e-41
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 197 bits (501), Expect = 4e-48
Identities = 91/141 (64%), Positives = 111/141 (78%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH+TV Y+PQQNG+AERMNRT+LERVRCML+SSGLSK FW EA TA +L+NRSPS
Sbjct: 537 GIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLINRSPSS 596
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
AL KTP+E W GK DY +L++FGCTAY H K DKL+PR+ KC+FLGYP+G KGY+L +
Sbjct: 597 ALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWI 656
Query: 363 RSLGSFKTIVSRDVVFK*NEM 425
+ G K I+SRDV F +M
Sbjct: 657 ETQGKGKCIISRDVTFNEQDM 677
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttatus]
Length = 598
Score = 185 bits (470), Expect = 1e-44
Identities = 88/136 (64%), Positives = 107/136 (78%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI+RHK+V ++PQQNGVAERMNRTLLERVR MLTSSGL K FWGEA++TA YL+NRSPS
Sbjct: 293 GIRRHKSVVHTPQQNGVAERMNRTLLERVRSMLTSSGLPKLFWGEAILTATYLINRSPSM 352
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
L+G PE +W GK D SNL +FG A+ H K DKL+PR KC+FLGYP+G KGYRL +
Sbjct: 353 PLNGDLPESVWCGKKVDLSNLHVFGYAAFVHHKGDKLEPRFVKCIFLGYPDGVKGYRLWL 412
Query: 363 RSLGSFKTIVSRDVVF 410
+ +K I+SRDV+F
Sbjct: 413 KGDFGYKIIISRDVIF 428
>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 184 bits (466), Expect = 4e-44
Identities = 84/133 (63%), Positives = 106/133 (79%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI H+TV Y+PQQNG+AERMNRT+LERVRCML+S GLSK FW EAV T +L++RSPS
Sbjct: 571 GIATHRTVRYTPQQNGLAERMNRTILERVRCMLSSLGLSKVFWVEAVETVVHLISRSPSS 630
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
AL KTP+E W GK DY +L++FGCTAY H K DKL+PR+ KC+FLGYP+G KGY+L +
Sbjct: 631 ALQFKTPQEKWTGKVVDYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWI 690
Query: 363 RSLGSFKTIVSRD 401
++ G K I+S+D
Sbjct: 691 KTQGKEKCIISKD 703
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 182 bits (463), Expect = 1e-43
Identities = 84/142 (59%), Positives = 111/142 (78%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH TVP++PQQNGVAERMNRT++ + RC+L+++GL K FW EAV TACYL+NRSPS
Sbjct: 786 GIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSY 845
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP E+W G P +YS+LR+FGCTAY+H+ + KL+PR+ KC+FLGYP G KGY+L
Sbjct: 846 AIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 905
Query: 363 RSLGSFKTIVSRDVVFK*NEML 428
+ K ++SR+VVF + ML
Sbjct: 906 PE--TKKVVISRNVVFHESVML 925
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 182 bits (463), Expect = 1e-43
Identities = 84/142 (59%), Positives = 111/142 (78%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH TVP++PQQNGVAERMNRT++ + RC+L+++GL K FW EAV TACYL+NRSPS
Sbjct: 579 GIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSY 638
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP E+W G P +YS+LR+FGCTAY+H+ + KL+PR+ KC+FLGYP G KGY+L
Sbjct: 639 AIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 698
Query: 363 RSLGSFKTIVSRDVVFK*NEML 428
+ K ++SR+VVF + ML
Sbjct: 699 PE--TKKVVISRNVVFHESVML 718
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 181 bits (460), Expect = 2e-43
Identities = 85/136 (62%), Positives = 105/136 (77%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH+TV ++PQQNGVAERMN+TL++R RCM +GLSK FW EAV TA YLVNRSPS
Sbjct: 678 GIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPST 737
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP+E+W GKP++YS L+IFGC AY+H+ D KL+PR+ KC+FLGY G KGYRL
Sbjct: 738 AIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWC 797
Query: 363 RSLGSFKTIVSRDVVF 410
+ K I+SRDV F
Sbjct: 798 TEDRTPKFIISRDVTF 813
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 181 bits (460), Expect = 2e-43
Identities = 85/136 (62%), Positives = 105/136 (77%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH+TV ++PQQNGVAERMN+TL++R RCM +GLSK FW EAV TA YLVNRSPS
Sbjct: 891 GIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPST 950
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP+E+W GKP++YS L+IFGC AY+H+ D KL+PR+ KC+FLGY G KGYRL
Sbjct: 951 AIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWC 1010
Query: 363 RSLGSFKTIVSRDVVF 410
+ K I+SRDV F
Sbjct: 1011 TEDRTPKFIISRDVTF 1026
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 180 bits (457), Expect = 5e-43
Identities = 83/142 (58%), Positives = 110/142 (77%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH TVP++PQQNGVAERMNRT++ + RCML+++GL K FW EAV TACYL+NRSPS
Sbjct: 540 GIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSY 599
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP ++W G P +YS+LR+FGC AY+H+ + KL+PR+ KC+FLGYP G KGY+L
Sbjct: 600 AIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWC 659
Query: 363 RSLGSFKTIVSRDVVFK*NEML 428
+ K ++SR+VVF + ML
Sbjct: 660 PE--TKKVVISRNVVFHESVML 679
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 180 bits (457), Expect = 5e-43
Identities = 86/136 (63%), Positives = 106/136 (77%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GIKRHKTV ++PQQNG+AERMNRTL+++ RCML +S L + FW EAV TA YLVNRSPS
Sbjct: 569 GIKRHKTVRFTPQQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVNRSPSS 628
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTPEELW+GKP +Y NLR+FGC AY H+ KL+ R+ K VF+GYP+G KGY++
Sbjct: 629 AIGFKTPEELWNGKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWC 688
Query: 363 RSLGSFKTIVSRDVVF 410
+ G K IVSRDVVF
Sbjct: 689 KDQG--KCIVSRDVVF 702
>ref|XP_010097937.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis] gi|587884397|gb|EXB73293.1|
Retrovirus-related Pol polyprotein from transposon TNT
1-94 [Morus notabilis]
Length = 1822
Score = 180 bits (456), Expect = 6e-43
Identities = 84/139 (60%), Positives = 106/139 (76%)
Frame = +3
Query: 6 IKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSDA 185
+ RHKTV +PQQNG+AERMNRTLLERVRCML + L K FWGE V TA YLVNR P A
Sbjct: 35 VVRHKTVRKTPQQNGLAERMNRTLLERVRCMLIEASLPKRFWGEVVNTAAYLVNRCPLAA 94
Query: 186 LSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*VR 365
+ KTPEE+W P ++ NL++FGCTAY+H K+ KLDPR++KC+F+GYPEG KGY+L +
Sbjct: 95 IDFKTPEEVWTDYPLNFENLKVFGCTAYAHQKEGKLDPRAKKCMFVGYPEGVKGYKLWCK 154
Query: 366 SLGSFKTIVSRDVVFK*NE 422
+ K+ +SRDVVF+ E
Sbjct: 155 YGNTSKSFISRDVVFRETE 173
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 178 bits (452), Expect = 2e-42
Identities = 82/142 (57%), Positives = 109/142 (76%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH TVP++PQQNGVAERMNRT++ + RCML+++GL K FW EAV TACYL+NRSP
Sbjct: 396 GIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGY 455
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP ++W G P +YS+L++FGCTAY+H+ + KL+PR+ KC+FLGYP G KGY+L
Sbjct: 456 AIDKKTPIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWC 515
Query: 363 RSLGSFKTIVSRDVVFK*NEML 428
+ K ++SR VVF + ML
Sbjct: 516 PE--TKKVVISRYVVFHESVML 535
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 178 bits (452), Expect = 2e-42
Identities = 82/142 (57%), Positives = 109/142 (76%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH TVP++PQQNGVAERMNRT++ + RCML+++GL K FW EAV TACYL+NRSP
Sbjct: 564 GIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGY 623
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP ++W G P +YS+L++FGCTAY+H+ + KL+PR+ KC+FLGYP G KGY+L
Sbjct: 624 AIDKKTPIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWC 683
Query: 363 RSLGSFKTIVSRDVVFK*NEML 428
+ K ++SR VVF + ML
Sbjct: 684 PE--TKKVVISRYVVFHESVML 703
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 177 bits (449), Expect = 4e-42
Identities = 82/142 (57%), Positives = 108/142 (76%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH TVP++PQQNGVAERMNRT++ + RCML+++GL K FW EAV TACYL+NRSPS
Sbjct: 400 GIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSY 459
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP E+W P YS+LR+F CTAY+H+ + KL+PR+ KC+FLGYP G KGY+L
Sbjct: 460 AIDKKTPIEVWSSSPAKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 519
Query: 363 RSLGSFKTIVSRDVVFK*NEML 428
+ K +++R+VVF + ML
Sbjct: 520 PE--TKKVVINRNVVFHESVML 539
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 176 bits (447), Expect = 7e-42
Identities = 84/148 (56%), Positives = 112/148 (75%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH T+PY+PQQNGVAERMNRT++ + RCML+++ ++K FW EA TACYL+NRSPS
Sbjct: 572 GIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSI 631
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
L+ KTP E+W G P DYS LR+FGCTAY+H+ + KL+PR+ KC+FLGY G KGY+L
Sbjct: 632 PLNKKTPIEIWSGMPADYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKL-- 689
Query: 363 RSLGSFKTIVSRDVVFK*NEMLV*NKLL 446
+ + KT +SR+V+F NE ++ N L
Sbjct: 690 WNPETNKTFMSRNVIF--NEFVMFNDSL 715
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 176 bits (446), Expect = 9e-42
Identities = 85/148 (57%), Positives = 112/148 (75%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH T+PY+PQQNGVAERMNRT++ + RCML+++ ++K FW EA TACYL+NRSPS
Sbjct: 572 GIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSI 631
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
L+ KTP E+W G P DYS LR+FGCTAY+H+ ++KL+PR+ KC+FLGY G KGY+L
Sbjct: 632 PLNKKTPIEIWSGMPADYSQLRVFGCTAYAHVDNEKLEPRAIKCLFLGYGLGVKGYKL-- 689
Query: 363 RSLGSFKTIVSRDVVFK*NEMLV*NKLL 446
+ + KT +SR VVF NE ++ N L
Sbjct: 690 WNPETNKTFMSRSVVF--NESVMFNDSL 715
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 176 bits (446), Expect = 9e-42
Identities = 83/142 (58%), Positives = 108/142 (76%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH TVP++PQQNGVAERMNRT++ + RCML+++ L K FW EAV TACYL+NRSPS
Sbjct: 488 GIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSY 547
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP E+W G P +YS+LR+FGCTAY+H+ + KL+PR KC+FLGY G KGY+L
Sbjct: 548 AIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWC 607
Query: 363 RSLGSFKTIVSRDVVFK*NEML 428
+ K ++SR+VVF + ML
Sbjct: 608 PE--TKKVVISRNVVFHESIML 627
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 176 bits (445), Expect = 1e-41
Identities = 84/145 (57%), Positives = 107/145 (73%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH TVP++PQQNGVAERM RT++ + RCML GL K FW EAV TACYL+NRSPS
Sbjct: 614 GIVRHYTVPHTPQQNGVAERMKRTIISKSRCMLPYVGLPKQFWAEAVSTACYLINRSPSY 673
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
A+ KTP E+W G P +YS+LR+FGC AY+H+ + KL+PR+ KC+FLGYP G KGY+L
Sbjct: 674 AIDKKTPIEVWSGSPANYSDLRVFGCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 733
Query: 363 RSLGSFKTIVSRDVVFK*NEMLV*N 437
+ K ++SR+VVF + ML N
Sbjct: 734 PE--TKKVVISRNVVFHESVMLYDN 756
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 175 bits (443), Expect = 2e-41
Identities = 81/136 (59%), Positives = 103/136 (75%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH T+P++PQQNGVAERMNRT++ R RCML+ + ++K FW EA TACYL+NRSPS
Sbjct: 571 GIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSI 630
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
L+ KTP E+W G P DYS L++FGCTAY+H+ + KL+PR+ KC+FLGY G KGY+L
Sbjct: 631 PLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWN 690
Query: 363 RSLGSFKTIVSRDVVF 410
G KT +SR VVF
Sbjct: 691 PETG--KTFMSRSVVF 704
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 175 bits (443), Expect = 2e-41
Identities = 81/136 (59%), Positives = 103/136 (75%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH T+P++PQQNGVAERMNRT++ R RCML+ + ++K FW EA TACYL+NRSPS
Sbjct: 571 GIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSI 630
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
L+ KTP E+W G P DYS L++FGCTAY+H+ + KL+PR+ KC+FLGY G KGY+L
Sbjct: 631 PLNKKTPIEVWSGMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWN 690
Query: 363 RSLGSFKTIVSRDVVF 410
G KT +SR VVF
Sbjct: 691 PETG--KTFMSRSVVF 704
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 175 bits (443), Expect = 2e-41
Identities = 81/136 (59%), Positives = 103/136 (75%)
Frame = +3
Query: 3 GIKRHKTVPYSPQQNGVAERMNRTLLERVRCMLTSSGLSKPFWGEAVVTACYLVNRSPSD 182
GI RH T+P++PQQNGVAERMNRT++ R RCML+ + ++K FW EA TACYL+NRSPS
Sbjct: 571 GIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSI 630
Query: 183 ALSGKTPEELWHGKPTDYSNLRIFGCTAYSHLKDDKLDPRSQKCVFLGYPEGTKGYRL*V 362
L+ KTP E+W G P DYS L++FGCTAY+H+ + KL+PR+ KC+FLGY G KGY+L
Sbjct: 631 PLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWN 690
Query: 363 RSLGSFKTIVSRDVVF 410
G KT +SR VVF
Sbjct: 691 PETG--KTFMSRSVVF 704