BLASTX nr result
ID: Forsythia22_contig00012179
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00012179
(725 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGJ51241.1| photosystem II protein I (chloroplast) [Solanum c... 101 2e-20
ref|YP_398843.1| hypothetical protein NitoCp007 [Nicotiana tomen... 103 1e-19
emb|CAJ32479.1| hypothetical protein [Nicotiana tabacum] 103 1e-19
ref|YP_004891584.1| unnamed protein product (chloroplast) [Nicot... 102 3e-19
ref|YP_009130823.1| photosystem II protein I (chloroplast) [Goss... 99 2e-18
gb|ADM92705.1| photosystem II protein I [Davidia involucrata] 99 2e-18
ref|YP_002720022.1| photosystem II protein I [Nicotiana tabacum] 99 2e-18
emb|CCQ71604.1| photosystem II protein I (chloroplast) [Salvia m... 98 3e-18
ref|YP_009139452.1| photosystem II protein I (chloroplast) [Duna... 98 6e-18
gb|AJS14322.1| photosystem II protein I (chloroplast) [Iochroma ... 98 6e-18
ref|YP_009041071.1| photosystem II protein I [Rhazya stricta] gi... 98 6e-18
ref|YP_008082717.1| photosystem II protein I [Prinsepia utilis] ... 98 6e-18
gb|AGM14995.1| photosystem II protein I, partial (chloroplast) [... 95 4e-17
gb|AHF71975.1| photosystem II protein I (chloroplast) [Paeonia s... 95 5e-17
ref|YP_009020727.1| photosystem II protein I (chloroplast) [Prax... 94 1e-16
gb|AGQ50340.1| photosystem II protein I (chloroplast) [Rumex ace... 93 1e-16
ref|YP_009045550.1| photosystem II protein I (chloroplast) [Cypr... 93 1e-16
ref|YP_008520123.1| photosystem II protein I (chloroplast) [Came... 93 2e-16
ref|YP_009048094.1| photosystem II protein I (chloroplast) [Prim... 92 3e-16
ref|YP_740186.1| photosystem II protein I [Liriodendron tulipife... 91 5e-16
>gb|AGJ51241.1| photosystem II protein I (chloroplast) [Solanum carolinense]
Length = 54
Score = 101 bits (251), Expect(2) = 2e-20
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = -3
Query: 534 FFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
FFF KNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 7 FFFQKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 54
Score = 25.8 bits (55), Expect(2) = 2e-20
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1
Query: 551 MEDLFSFFFQK 519
M+DLFSFFFQK
Sbjct: 1 MDDLFSFFFQK 11
>ref|YP_398843.1| hypothetical protein NitoCp007 [Nicotiana tomentosiformis]
gi|80750905|dbj|BAE47981.1| hypothetical protein
[Nicotiana tomentosiformis]
Length = 90
Score = 103 bits (257), Expect = 1e-19
Identities = 60/90 (66%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Frame = -1
Query: 422 MIQDVILDVKNKIQRVFPWLIFKFS*DFIYSTRLTXXXXXXXXXXXXXXXXK---RGIRT 252
MI DVILDVKNKI+R FP LIFKFS D +YST LT RGIRT
Sbjct: 1 MIPDVILDVKNKIKRGFPCLIFKFSYDLVYSTHLTKNKNKGFRNLKKKNQVINGKRGIRT 60
Query: 251 LGTNNSYNGLAIRRFSPLSHLSQLKKRITT 162
LGT NSYNGLAIRRFSPLSHLSQLKK ITT
Sbjct: 61 LGTINSYNGLAIRRFSPLSHLSQLKKIITT 90
>emb|CAJ32479.1| hypothetical protein [Nicotiana tabacum]
Length = 90
Score = 103 bits (257), Expect = 1e-19
Identities = 59/90 (65%), Positives = 63/90 (70%), Gaps = 3/90 (3%)
Frame = -1
Query: 422 MIQDVILDVKNKIQRVFPWLIFKFS*DFIYSTRLTXXXXXXXXXXXXXXXXK---RGIRT 252
MI DVILDVKNKI++VFP LIF+FS D +YST LT RGIRT
Sbjct: 1 MIPDVILDVKNKIKKVFPCLIFQFSYDLVYSTHLTKNKNKGFRNLKKKNQVINGKRGIRT 60
Query: 251 LGTNNSYNGLAIRRFSPLSHLSQLKKRITT 162
LGT NSYNGLAIRRFSPLSHLSQLKK ITT
Sbjct: 61 LGTINSYNGLAIRRFSPLSHLSQLKKIITT 90
>ref|YP_004891584.1| unnamed protein product (chloroplast) [Nicotiana undulata]
gi|347453885|gb|AEO95543.1| hypothetical protein
(chloroplast) [Nicotiana undulata]
gi|347453996|gb|AEO95653.1| hypothetical protein
[synthetic construct]
Length = 90
Score = 102 bits (253), Expect = 3e-19
Identities = 59/90 (65%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Frame = -1
Query: 422 MIQDVILDVKNKIQRVFPWLIFKFS*DFIYSTRLTXXXXXXXXXXXXXXXXK---RGIRT 252
MI DVILDVKNK +RVFP LIF+FS D +YST LT RGIRT
Sbjct: 1 MIPDVILDVKNKRKRVFPCLIFQFSYDLVYSTHLTKNKNKGFRNLKKKNQVSNGKRGIRT 60
Query: 251 LGTNNSYNGLAIRRFSPLSHLSQLKKRITT 162
LGT NSYNGLAIRRFSPLSHLSQLKK ITT
Sbjct: 61 LGTINSYNGLAIRRFSPLSHLSQLKKIITT 90
>ref|YP_009130823.1| photosystem II protein I (chloroplast) [Gossypium turneri]
gi|384034848|gb|AFH57561.1| photosystem II protein I
(chloroplast) [Gossypium turneri]
Length = 50
Score = 99.4 bits (246), Expect = 2e-18
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -3
Query: 540 ILFFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
+LFFF KN LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 1 MLFFFQKNALGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 50
>gb|ADM92705.1| photosystem II protein I [Davidia involucrata]
Length = 51
Score = 99.4 bits (246), Expect = 2e-18
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = -3
Query: 534 FFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
FFFSKN LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 FFFSKNDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>ref|YP_002720022.1| photosystem II protein I [Nicotiana tabacum]
Length = 51
Score = 99.0 bits (245), Expect = 2e-18
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = -3
Query: 531 FFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
FF KNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 5 FFKKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>emb|CCQ71604.1| photosystem II protein I (chloroplast) [Salvia miltiorrhiza]
Length = 53
Score = 98.2 bits (243), Expect(2) = 3e-18
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = -3
Query: 531 FFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
FF KNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 7 FFLKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 53
Score = 21.2 bits (43), Expect(2) = 3e-18
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1
Query: 551 MEDLFSFFFQ 522
MEDLFSFF +
Sbjct: 1 MEDLFSFFLK 10
>ref|YP_009139452.1| photosystem II protein I (chloroplast) [Dunalia solanacea]
gi|817597836|gb|AKF78396.1| photosystem II protein I
(chloroplast) [Dunalia solanacea]
Length = 52
Score = 97.8 bits (242), Expect = 6e-18
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -3
Query: 531 FFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
FF KNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRE+
Sbjct: 6 FFQKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRED 52
>gb|AJS14322.1| photosystem II protein I (chloroplast) [Iochroma calycinum]
Length = 53
Score = 97.8 bits (242), Expect = 6e-18
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -3
Query: 531 FFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
FF KNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRE+
Sbjct: 7 FFQKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRED 53
>ref|YP_009041071.1| photosystem II protein I [Rhazya stricta]
gi|645929193|gb|AIB08717.1| photosystem II protein I
[Rhazya stricta]
Length = 52
Score = 97.8 bits (242), Expect = 6e-18
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = -3
Query: 537 LFFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
LFFF N+LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LFFFPTNYLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 52
>ref|YP_008082717.1| photosystem II protein I [Prinsepia utilis]
gi|501418807|gb|AGL94684.1| photosystem II protein I
[Prinsepia utilis]
Length = 57
Score = 97.8 bits (242), Expect = 6e-18
Identities = 50/55 (90%), Positives = 50/55 (90%)
Frame = -3
Query: 555 KNGRSILFFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
KNG SILFF KN LGD VMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 KNGESILFFTKKN-LGDSVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 57
>gb|AGM14995.1| photosystem II protein I, partial (chloroplast) [Panax ginseng]
gi|506444521|gb|AGM15081.1| photosystem II protein I,
partial (chloroplast) [Panax ginseng]
gi|506444637|gb|AGM15167.1| photosystem II protein I,
partial (chloroplast) [Panax ginseng]
Length = 51
Score = 95.1 bits (235), Expect = 4e-17
Identities = 45/48 (93%), Positives = 45/48 (93%)
Frame = -3
Query: 534 FFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
FFF K LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 FFFPKKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>gb|AHF71975.1| photosystem II protein I (chloroplast) [Paeonia sp. Sd0052]
Length = 49
Score = 94.7 bits (234), Expect = 5e-17
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = -3
Query: 537 LFFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
+ FF KN LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRE+
Sbjct: 1 MLFFPKNDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRED 49
>ref|YP_009020727.1| photosystem II protein I (chloroplast) [Praxelis clematidea]
gi|594543306|gb|AHM02387.1| photosystem II protein I
(chloroplast) [Praxelis clematidea]
Length = 53
Score = 93.6 bits (231), Expect = 1e-16
Identities = 45/48 (93%), Positives = 45/48 (93%)
Frame = -3
Query: 534 FFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
F FSKN LG CVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 6 FSFSKNDLGGCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 53
>gb|AGQ50340.1| photosystem II protein I (chloroplast) [Rumex acetosa]
Length = 53
Score = 93.2 bits (230), Expect = 1e-16
Identities = 47/53 (88%), Positives = 48/53 (90%)
Frame = -3
Query: 549 GRSILFFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
G SILFF K+ GDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 2 GESILFFTQKDP-GDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 53
>ref|YP_009045550.1| photosystem II protein I (chloroplast) [Cypripedium macranthos]
gi|578888850|gb|AHI16733.1| photosystem II protein I
(chloroplast) (chloroplast) [Cypripedium macranthos]
Length = 52
Score = 93.2 bits (230), Expect = 1e-16
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = -3
Query: 537 LFFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
LF F K +LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LFPFFKKNLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 52
>ref|YP_008520123.1| photosystem II protein I (chloroplast) [Camellia taliensis]
gi|552539656|ref|YP_008592741.1| photosystem II protein
I (chloroplast) [Camellia cuspidata]
gi|552540902|ref|YP_008592830.1| photosystem II protein
I (chloroplast) [Camellia danzaiensis]
gi|552540998|ref|YP_008592917.1| photosystem II protein
I (chloroplast) [Camellia impressinervis]
gi|552541092|ref|YP_008593095.1| photosystem II protein
I (chloroplast) [Camellia yunnanensis]
gi|552546251|ref|YP_008593006.1| photosystem II protein
I (chloroplast) [Camellia pitardii]
gi|669100053|ref|YP_009047916.1| photosystem II protein
I (chloroplast) [Camellia crapnelliana]
gi|537362474|gb|AGU44282.1| photosystem II protein I
(chloroplast) [Camellia cuspidata]
gi|537362561|gb|AGU44368.1| photosystem II protein I
(chloroplast) [Camellia danzaiensis]
gi|537362652|gb|AGU44458.1| photosystem II protein I
(chloroplast) [Camellia impressinervis]
gi|537362742|gb|AGU44547.1| photosystem II protein I
(chloroplast) [Camellia taliensis]
gi|537362832|gb|AGU44636.1| photosystem II protein I
(chloroplast) [Camellia pitardii]
gi|537362922|gb|AGU44725.1| photosystem II protein I
(chloroplast) [Camellia yunnanensis]
gi|537363012|gb|AGU44814.1| photosystem II protein I
(chloroplast) [Camellia taliensis]
gi|573015039|gb|AHF71623.1| photosystem II protein I
(chloroplast) [Camellia crapnelliana]
gi|685844891|gb|AIP85215.1| PsbI (chloroplast) [Camellia
sinensis]
Length = 51
Score = 92.8 bits (229), Expect = 2e-16
Identities = 46/49 (93%), Positives = 46/49 (93%)
Frame = -3
Query: 537 LFFFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
LFFFSK GDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LFFFSKK-FGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>ref|YP_009048094.1| photosystem II protein I (chloroplast) [Primula poissonii]
gi|573015217|gb|AHF71799.1| photosystem II protein I
(chloroplast) [Primula poissonii]
Length = 51
Score = 92.0 bits (227), Expect = 3e-16
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -3
Query: 531 FFSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
F KN LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 5 FSPKNDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>ref|YP_740186.1| photosystem II protein I [Liriodendron tulipifera]
gi|113200978|gb|ABI32493.1| photosystem II protein I
[Liriodendron tulipifera]
Length = 51
Score = 91.3 bits (225), Expect = 5e-16
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = -3
Query: 528 FSKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 391
F +N LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 6 FPQNDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51