BLASTX nr result

ID: Forsythia22_contig00012040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00012040
         (268 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60972.1| hypothetical protein VITISV_032051 [Vitis vinifera]    49   4e-06
emb|CAN59884.1| hypothetical protein VITISV_026166 [Vitis vinifera]    49   8e-06
emb|CAN74064.1| hypothetical protein VITISV_028146 [Vitis vinifera]    49   9e-06

>emb|CAN60972.1| hypothetical protein VITISV_032051 [Vitis vinifera]
          Length = 1446

 Score = 48.5 bits (114), Expect(2) = 4e-06
 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
 Frame = +1

Query: 79   HSPCEEHQEAIFRILMYLKRTPVIQERKLFAGRS-------IHEW*LAG*MSDRRSTSGD 237
            HSP EEH EA++RIL YLK TP    + LF  ++         +   AG + DRRSTSG 
Sbjct: 1253 HSPTEEHMEAVYRILRYLKMTP---GKGLFFRKTENRDTEVYSDADXAGNIIDRRSTSGY 1309

Query: 238  CTFV 249
            C+FV
Sbjct: 1310 CSFV 1313



 Score = 28.5 bits (62), Expect(2) = 4e-06
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 14   IYYLPHTQPDLSFAMSIVSQ 73
            + YL HT+PD+ FA+S  SQ
Sbjct: 1231 LIYLSHTRPDIGFAVSAXSQ 1250


>emb|CAN59884.1| hypothetical protein VITISV_026166 [Vitis vinifera]
          Length = 6311

 Score = 48.9 bits (115), Expect(2) = 8e-06
 Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
 Frame = +1

Query: 82   SPCEEHQEAIFRILMYLKRTP---VIQERK---LFAGRSIHEW*LAG*MSDRRSTSGDCT 243
            SPC+ H +A+ RIL Y+K TP   V+ E +      G +  +W  AG  +DRRSTSG C 
Sbjct: 1810 SPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGYTDVDW--AGSPTDRRSTSGYCV 1867

Query: 244  FVG 252
            F+G
Sbjct: 1868 FIG 1870



 Score = 26.9 bits (58), Expect(2) = 8e-06
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 20   YLPHTQPDLSFAMSIVSQ 73
            YL  T+PD+SF +S+VSQ
Sbjct: 1789 YLTITRPDISFPVSVVSQ 1806


>emb|CAN74064.1| hypothetical protein VITISV_028146 [Vitis vinifera]
          Length = 1203

 Score = 48.9 bits (115), Expect(2) = 9e-06
 Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
 Frame = +1

Query: 82   SPCEEHQEAIFRILMYLKRTP---VIQERK---LFAGRSIHEW*LAG*MSDRRSTSGDCT 243
            SPC+ H +A+ RIL Y+K TP   V+ E +      G +  +W  AG  +DRRSTSG C 
Sbjct: 1011 SPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGYTDVDW--AGSPTDRRSTSGYCV 1068

Query: 244  FVG 252
            F+G
Sbjct: 1069 FIG 1071



 Score = 26.9 bits (58), Expect(2) = 9e-06
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 20   YLPHTQPDLSFAMSIVSQ 73
            YL  T+PD+SF +S+VSQ
Sbjct: 990  YLTITRPDISFPVSVVSQ 1007


Top