BLASTX nr result
ID: Forsythia22_contig00011237
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00011237
(5502 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I sub... 2521 0.0
ref|XP_012834350.1| PREDICTED: DNA-directed RNA polymerase I sub... 2339 0.0
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 2211 0.0
ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I sub... 2196 0.0
emb|CDP10074.1| unnamed protein product [Coffea canephora] 2196 0.0
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 2189 0.0
ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I sub... 2118 0.0
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise... 2041 0.0
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub... 1983 0.0
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 1982 0.0
ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub... 1804 0.0
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 1804 0.0
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ... 1773 0.0
ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I sub... 1763 0.0
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 1754 0.0
ref|XP_009345035.1| PREDICTED: DNA-directed RNA polymerase I sub... 1739 0.0
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas... 1738 0.0
ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I sub... 1725 0.0
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 1723 0.0
ref|XP_012574995.1| PREDICTED: DNA-directed RNA polymerase I sub... 1719 0.0
>ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Sesamum
indicum]
Length = 1701
Score = 2521 bits (6533), Expect = 0.0
Identities = 1295/1718 (75%), Positives = 1435/1718 (83%), Gaps = 7/1718 (0%)
Frame = -3
Query: 5326 ATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDENFACKSC 5147
+TE VEAV+FGFMTDEEVR HSVVK+TNPNLLD LEKPI GGLYDPAMGPLDEN CKSC
Sbjct: 3 STEVVEAVRFGFMTDEEVRRHSVVKITNPNLLDILEKPIPGGLYDPAMGPLDENSPCKSC 62
Query: 5146 GQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCVTQLEQI 4967
GQR+YHCPGHCGHI+LVSP YNPLLFN L+NLLNKTCF+CF FR+SR EV+NCV+QLE I
Sbjct: 63 GQRAYHCPGHCGHIELVSPAYNPLLFNTLNNLLNKTCFYCFQFRTSRREVENCVSQLELI 122
Query: 4966 AEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQKHSEHNKQ 4787
+GDI+GAKRL++ Q +++ DS+GSH S S Q H E N Q
Sbjct: 123 VKGDIVGAKRLSMRQNLQDKKNMDWVLSDDIVDPEDSQGSHTSHSSGISGDQNHYEQNSQ 182
Query: 4786 GCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIRSNATR 4607
CWDS Q TEA+ VLNEFL KPTFGWFH+SGLS Q+RSNA R
Sbjct: 183 ACWDSSQLTEAMSVLNEFLKKKGRKCKNCECNNPKLNKPTFGWFHVSGLSDTQLRSNAIR 242
Query: 4606 HSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKKPMHQARN 4427
SRL V + G E++ SWK + KKS KK ++QARN
Sbjct: 243 RSRLDVAHSGGGEERPSSEVVNASDYSWKDDSETAEANSFIAASDTPKKSSKKGVNQARN 302
Query: 4426 FSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGESGKVTSHSM 4247
Q LE+ NYFSGPLLPSEVRDI+RRLWENEAP+CSY+CDI + SG V +SM
Sbjct: 303 --QGLEETNNYFSGPLLPSEVRDILRRLWENEAPLCSYMCDIQQQQCKL--SGNVAGYSM 358
Query: 4246 FFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFINRWM 4067
FFLESILVPPIKFRPPAKGGDSVMEHP T+LLGKVLQSNIALGNAHVN+AERSK INRWM
Sbjct: 359 FFLESILVPPIKFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNNAERSKIINRWM 418
Query: 4066 DLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPY 3887
DLQ SINVL+DSKTA +KD TSGICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPY
Sbjct: 419 DLQLSINVLFDSKTANSQAQKDGTSGICQFLEKKEGIFRQKMMGKRVNFACRSVISPDPY 478
Query: 3886 LAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVSTVKLPSNK 3707
LAVNEIG+PPYFALRLTYPERVTPWN+ KLR A+INGP+IHPGATTYVD VSTVKLPS+K
Sbjct: 479 LAVNEIGIPPYFALRLTYPERVTPWNAGKLRGAVINGPEIHPGATTYVDSVSTVKLPSSK 538
Query: 3706 KMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 3527
KMR+AISRKLPSSRG+V+QSGK NE EFEGK VYRHLQDGDIVLVNRQPTLHKPSIMAHV
Sbjct: 539 KMRVAISRKLPSSRGLVSQSGKINELEFEGKFVYRHLQDGDIVLVNRQPTLHKPSIMAHV 598
Query: 3526 VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGD 3347
VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPT+GD
Sbjct: 599 VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGD 658
Query: 3346 TVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSRKVSLVDSEG 3167
TVRGLIQDHIV AVLLT+K+TFLTR EF+QLLYGSGVFA PGS G SRKVSLVDSEG
Sbjct: 659 TVRGLIQDHIVGAVLLTLKNTFLTRSEFSQLLYGSGVFAGGPGSLAGKQSRKVSLVDSEG 718
Query: 3166 VMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYFTDSTYKSEDEE 2987
+++SVLP++WKP PLWTGKQVITALLNHITRGCAPCTVKNQGK+PK+YFT S+YK+ EE
Sbjct: 719 LVESVLPSIWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFTGSSYKN-GEE 777
Query: 2986 DRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGIFLSALSRLFTIFL 2807
D DQNAEH LLIWKNELVRGVIDKAQFGKFGLVHT+QELYGSNSAGI LSALSRLFTIFL
Sbjct: 778 DEDQNAEHNLLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNSAGILLSALSRLFTIFL 837
Query: 2806 QIHGFTCGVDDLIILPNYDKERKEKLEGEDVGEEVHCNFVKFKRGQIGPEELQLEIEKVI 2627
QIHGFTCGVDDLIILP+YD +RKEKLEGEDVGEEVHC+FVKFK GQIG EELQLEIEKVI
Sbjct: 838 QIHGFTCGVDDLIILPHYDVQRKEKLEGEDVGEEVHCDFVKFKPGQIGHEELQLEIEKVI 897
Query: 2626 CSNRESATASLDMKMKNKLTDK----GSQISKKLLTKGLLKPFPKNCISVMTTTGAKGST 2459
C +RESAT +LDMKMKNKLT++ GSQI K LLT GLLKPFPKNCISVMTTTGAKGST
Sbjct: 898 CRDRESATGALDMKMKNKLTNRLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGST 957
Query: 2458 VNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFITDRFLTGLRPQEYYF 2279
VNFQQIS+YLGQQELEGKRVPRMVSGKTLPCF PWDFT+RAGGFITDRFLTGLRPQEYYF
Sbjct: 958 VNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTARAGGFITDRFLTGLRPQEYYF 1017
Query: 2278 HCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQFYYGEDGVDV 2099
HCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKV YDYTVRDADGSIIQFYYGEDGVDV
Sbjct: 1018 HCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDV 1077
Query: 2098 HRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDGLEKEARHFIREARKETSEVQK 1919
H+TSFLKNFKAL DNQETI +K++N+R+F++YI+KLP+GLE+EAR FI+EA +SE QK
Sbjct: 1078 HQTSFLKNFKALEDNQETILQKYRNRRQFDSYIQKLPEGLEEEARRFIQEAGDLSSENQK 1137
Query: 1918 PTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQKYLSSLAQSGEPVGVIAAQSV 1739
+ +HL K RKA+ +K T K Q++F+EL++QKYLSSLAQSGEPVGVIAAQS+
Sbjct: 1138 ASGIKHLNKSRKAR--------KKVTGKVQDKFIELVKQKYLSSLAQSGEPVGVIAAQSI 1189
Query: 1738 GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFMQYRYKPDVMY 1559
GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASD IKTPILTCPF+Q+R K DV+
Sbjct: 1190 GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFLQWRSKHDVVS 1249
Query: 1558 LVSNVKKVSIADLAESMEVELSINHQQVARIYKLKMNLKATEFVSLEDLHATLRSTFLRE 1379
LVSNVKKV++ADL ESMEV+LSI HQ ARIYKLKM LK TEFVSL D+ TL++ FLRE
Sbjct: 1250 LVSNVKKVTVADLIESMEVQLSI-HQ--ARIYKLKMKLKDTEFVSLRDIQETLKTVFLRE 1306
Query: 1378 LEDAIENHVVFLSRVSGIKNFTLSSPSETLTEA-DNNSTVRSXXXXXXXXXXXXXERGED 1202
LEDAIENHV+FLSRVSGIKNF SS SE EA +++S R+ ++G+D
Sbjct: 1307 LEDAIENHVIFLSRVSGIKNFMSSSRSEESNEAYEDDSGPRAQEEIDDDDADDDYDKGDD 1366
Query: 1201 LGSDVQKRKQQSTDEMDYDDGSEAEPDEGELSSELEKGQTYQDHLEEADNRK-XXXXXXX 1025
LGSDVQKRKQQ++DEMDY+D S+ +P E E L KG++ DHLE+ D RK
Sbjct: 1367 LGSDVQKRKQQASDEMDYEDESDVDPGEDE---GLGKGKSDGDHLEDIDTRKDEETDDFD 1423
Query: 1024 XXXEASNMQNDRETKSESKSSRAGAKSTAKTNEKSGEE-FSDKKPRRAIYIAVKGLHFEV 848
+ASN+QN E +E+KSS ++ +K +KS EE SDKK RRAIY+ VKGL FEV
Sbjct: 1424 DKDDASNVQNVDEVMAEAKSSGKKDRAISKGIDKSIEELLSDKKIRRAIYMEVKGLSFEV 1483
Query: 847 HFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKTVIWDDDKKPKKSTVK 668
HF FT EPH+LLAQIAQKTAKKV+IK +GKIS CK+V+YD DEKTVIWD+ KKPKK +
Sbjct: 1484 HFTFTSEPHVLLAQIAQKTAKKVFIKRTGKISQCKVVQYDPDEKTVIWDNKKKPKKGDAE 1543
Query: 667 DLQTDNEDLAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAARATIIRE 488
Q D ED AYWA+KASG DFKS WEMQDDLDLSRLYSNNI AMLKTYGVEAARAT+IRE
Sbjct: 1544 KQQADGEDSAYWAVKASGEDFKSIWEMQDDLDLSRLYSNNIHAMLKTYGVEAARATLIRE 1603
Query: 487 VKQVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETASKFIVE 308
V QVFDIYGVKIDYRHLSLIADYMTH GGYRPM+RHGSI+ESLSPF+KMSFETASKFIVE
Sbjct: 1604 VTQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVE 1663
Query: 307 AASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQKLEV 194
AASH +TDNLETPSSRICLGLPVKMGTGCFDLMQKL++
Sbjct: 1664 AASHALTDNLETPSSRICLGLPVKMGTGCFDLMQKLDI 1701
>ref|XP_012834350.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Erythranthe
guttatus] gi|604336035|gb|EYU39881.1| hypothetical
protein MIMGU_mgv1a000122mg [Erythranthe guttata]
Length = 1719
Score = 2339 bits (6061), Expect = 0.0
Identities = 1198/1725 (69%), Positives = 1378/1725 (79%), Gaps = 10/1725 (0%)
Frame = -3
Query: 5338 STEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDENFA 5159
STE TE VEAV+FGF TDEE R HS+VK+TNPNL+D L KP GGLYDPAMG LDE
Sbjct: 3 STECTTEVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSI 62
Query: 5158 CKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCVTQ 4979
C+SCGQR+Y C GHCGHI+LVS YNPLLFN L N+LNKTC +C F SS E +N V+Q
Sbjct: 63 CESCGQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQ 122
Query: 4978 LEQIAEGDIIGAKRLNIHQKIK-EXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQKHS 4802
LE I +GD+ GAK+L + K + DS+GSH+S + SD + H
Sbjct: 123 LELIRKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHF 182
Query: 4801 EHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGL-SGNQI 4625
+ ++Q W S Q EAI V+NE+L KPTFGWF + G S I
Sbjct: 183 KDDEQASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAI 242
Query: 4624 RSNATRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKKP 4445
R N R +L + G ED S STKKSKKK
Sbjct: 243 RENVIRSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVESNSFIATSNSTKKSKKKG 302
Query: 4444 MHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGESGK 4265
+++A+ + P Y SGPLLPS+VRDI++ LWE EA CSYI DI + G
Sbjct: 303 VNRAKKLNPGSGDPNFYLSGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCK--PFGN 360
Query: 4264 VTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAERSK 4085
T +SMFFLE++LVPPI+FRPPAKGGDSVMEHP T+LLGKVLQSNIALGNAHVN AE+SK
Sbjct: 361 KTGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVN-AEKSK 419
Query: 4084 FINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRSV 3905
I+RWM+LQQSINV +DSKTAT +KD +GICQ LEKKEGIFRQKMMGKRVNFACRSV
Sbjct: 420 IISRWMELQQSINVYFDSKTATSLAQKDSIAGICQFLEKKEGIFRQKMMGKRVNFACRSV 479
Query: 3904 ISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVSTV 3725
ISPDPYLAVNEIG+PPYFAL+LTYPERVTPWN+ KLR A++NGPDIHPGATTYVD V+ V
Sbjct: 480 ISPDPYLAVNEIGIPPYFALKLTYPERVTPWNAAKLRGAVVNGPDIHPGATTYVDSVTIV 539
Query: 3724 KLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTLHKP 3545
KLP ++KMR+AISRKLPSSRGVVTQSGK ++ EFEGK V+RHLQDGDIVLVNRQPTLHKP
Sbjct: 540 KLPPSQKMRVAISRKLPSSRGVVTQSGKFDDLEFEGKTVHRHLQDGDIVLVNRQPTLHKP 599
Query: 3544 SIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYI 3365
SIMAHVVRVL GE+TLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYI
Sbjct: 600 SIMAHVVRVLHGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYI 659
Query: 3364 VPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSRKVS 3185
VPT+GDTVRGLIQDHIV AVLLTMK+TF+ R EFNQLLYGSGVFA PGS P NNSRKV+
Sbjct: 660 VPTKGDTVRGLIQDHIVGAVLLTMKNTFVNRSEFNQLLYGSGVFASGPGSLPKNNSRKVT 719
Query: 3184 LVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYFTDSTY 3005
L+D+EGV++SVLPA+WKP PLWTGKQVITALLNHITRGCAP TV+NQGK+PK+YF ++Y
Sbjct: 720 LIDTEGVVESVLPAIWKPEPLWTGKQVITALLNHITRGCAPFTVENQGKIPKNYFFGNSY 779
Query: 3004 KSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGIFLSALSR 2825
+ EED DQNAEH LL+WKNELVRGVIDKAQFGKFGLVHTVQELYG++SAGIFLSALSR
Sbjct: 780 -TRGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGASSAGIFLSALSR 838
Query: 2824 LFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEGEDVGEEVHCNFVKFKRGQIGPEELQL 2645
+FT+FLQIHGFTCGVDDLIILP+YD +RKEKLEGEDVGE VHC+FVKFK GQIGP+ELQL
Sbjct: 839 VFTLFLQIHGFTCGVDDLIILPDYDDQRKEKLEGEDVGEVVHCDFVKFKPGQIGPDELQL 898
Query: 2644 EIEKVICSNRESATASLDMKMKNKLTDK----GSQISKKLLTKGLLKPFPKNCISVMTTT 2477
EIEKVIC++RESATASLDMKMKNKL K GSQI K LLT GLLKPFPKNCISVMTTT
Sbjct: 899 EIEKVICTDRESATASLDMKMKNKLNSKLTREGSQILKHLLTAGLLKPFPKNCISVMTTT 958
Query: 2476 GAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFITDRFLTGLR 2297
GAKGSTVNFQQIS+YLGQQELEGKRVPRMVSGKTLP F PWDFTSRAGGFITDRFLTGLR
Sbjct: 959 GAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRFLTGLR 1018
Query: 2296 PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQFYYG 2117
PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLESLKV YDYTVRDADGSI+QFYYG
Sbjct: 1019 PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVCYDYTVRDADGSIVQFYYG 1078
Query: 2116 EDGVDVHRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDGLEKEARHFIREARKE 1937
EDG+DVHRTSFL NFKAL DN+ETIC+KFQ+KREFN+YI+KLP+GLE+EA+ FI+E + +
Sbjct: 1079 EDGIDVHRTSFLNNFKALQDNRETICQKFQHKREFNSYIKKLPEGLEEEAKRFIQETQNK 1138
Query: 1936 TSEVQKPTEKEHLPKGRKAKRKENQLEERKATEK-EQNEFLELIEQKYLSSLAQSGEPVG 1760
+ Q + E RKA++KE L++ KA EQ+ FLEL++QKYLSSLAQ+GEPVG
Sbjct: 1139 SLAKQSTSAGEGPHSSRKARKKEKLLKKEKAAAAYEQDAFLELVKQKYLSSLAQAGEPVG 1198
Query: 1759 VIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFMQYR 1580
VIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM+AS+ IKTP+LTCPF Q+R
Sbjct: 1199 VIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSASEVIKTPLLTCPFSQWR 1258
Query: 1579 YKPDVMYLVSNVKKVSIADLAESMEVELSINHQQVARIYKLKMNLKATEFVSLEDLHATL 1400
K +V+ LVS+VKKVS+ADL E+MEV+LS+NH+ AR+YKLKM LK TEFVSLE++H TL
Sbjct: 1259 SKREVVSLVSHVKKVSVADLIENMEVQLSVNHKTAARVYKLKMTLKDTEFVSLENMHETL 1318
Query: 1399 RSTFLRELEDAIENHVVFLSRVSGIKNFTLSSPSETLTEADNNST--VRSXXXXXXXXXX 1226
++TFL ELEDAIENHV++LSR+SGIKNF + ++ EAD + +
Sbjct: 1319 KTTFLGELEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADEDESGLGTENAGVNDDDDD 1378
Query: 1225 XXXERGEDLGSDVQKRKQQSTDEMDYDDGSEAEPDEGELSSELEKGQTYQDHLEEADNRK 1046
++G+DLGSDVQKRKQQ+TD+MDY+DGS+ E + S+LEKG++ ++LEE + K
Sbjct: 1379 DDDDKGDDLGSDVQKRKQQATDDMDYEDGSDGGAAEDD-DSDLEKGKSDVENLEEDETGK 1437
Query: 1045 -XXXXXXXXXXEASNMQNDRETKSESKSSRAGAKSTAKTNEKSGEEFSDKKPRRAIYIAV 869
EASN+QN+ E SE S G+ + +KS E KK RRA Y+ V
Sbjct: 1438 DEESEHTDDKDEASNVQNEDEAISEGTKSSVGSSKGKTSFDKSSVELKGKKIRRAFYMVV 1497
Query: 868 KGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKTVIWDDDKK 689
KG FEVHF+F EPH+L+AQ+AQKT+KKVYI+ SGK+S CKMV YD DEKTVIWD+ KK
Sbjct: 1498 KGTKFEVHFEFHEEPHMLIAQLAQKTSKKVYIRKSGKVSQCKMVSYDPDEKTVIWDNSKK 1557
Query: 688 PKKSTVKDLQTDNEDLAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAA 509
PK+ K ++ ED +YWA+KASGVDFKSFWEM DDLDLSRLYSNNI AML TYGVEAA
Sbjct: 1558 PKRGESK---SEEEDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNIHAMLTTYGVEAA 1614
Query: 508 RATIIREVKQVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFET 329
RATIIREVK VFDIYGVKIDYRHLSLIAD+MTH G Y PM+RHGSI+ESLSPF+KMSFET
Sbjct: 1615 RATIIREVKHVFDIYGVKIDYRHLSLIADHMTHTGSYLPMSRHGSISESLSPFLKMSFET 1674
Query: 328 ASKFIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQKLEV 194
ASKFIVEAASHG+TD L+TPSSRICLGLPVKMGTG FD+MQ+L++
Sbjct: 1675 ASKFIVEAASHGLTDKLDTPSSRICLGLPVKMGTGSFDVMQQLDL 1719
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 2211 bits (5729), Expect = 0.0
Identities = 1125/1721 (65%), Positives = 1345/1721 (78%), Gaps = 8/1721 (0%)
Frame = -3
Query: 5332 EGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDENFACK 5153
+GA+EAVEAV F FMTDEEVR HSVVK+T+PNLLD L+ P+ GLYDPAMGPLD CK
Sbjct: 3 QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62
Query: 5152 SCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCVTQLE 4973
C Q + C GHCGHI+LVSPVYNPLLFNMLHNLL +TCF+CFHFR+SR EV+ CV++LE
Sbjct: 63 FCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120
Query: 4972 QIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQKHSEHN 4793
IA+GD++GAK ++ +SEGSH+S + Q H E+N
Sbjct: 121 LIAKGDVVGAKMIDA------------LSPDNSTDREESEGSHMSCAMDDLNMQDHREYN 168
Query: 4792 KQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIRSNA 4613
K+ WD+ QFTEA+ V++ L KP+FG FHM +S QIR N
Sbjct: 169 KRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENY 227
Query: 4612 TRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKKPMHQA 4433
R + G ++ K++K+ Q
Sbjct: 228 INSGRRFNLHDTGGSEENPSPEVVNATEP--LGEAETSLCVTSTDGVENSKARKR---QG 282
Query: 4432 RNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGESGKVTSH 4253
+ S +E+ K+ FS LPS+VR I+ LWENEAP+C++ CDI H SGKV
Sbjct: 283 GDQSDVVEQQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQH--HNTSGKVAGP 340
Query: 4252 SMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFINR 4073
SMFFL+SILVPPIKFRPPAKGGDS+MEHPHT+LLGKV+Q+NIALGNAH+N A RSK I+R
Sbjct: 341 SMFFLDSILVPPIKFRPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISR 400
Query: 4072 WMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRSVISPD 3893
MDLQQS+NVL+DSKTA+GPG+KD+ SGICQ+LEKKEGIFRQKMMGKRVNFACRSVISPD
Sbjct: 401 LMDLQQSVNVLFDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPD 460
Query: 3892 PYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVSTVKLPS 3713
PYL+VNEIG+PPYFALRLTYPER+TPWN+VK+R+A+INGP+ HPGA ++ D+++TVKLPS
Sbjct: 461 PYLSVNEIGIPPYFALRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPS 520
Query: 3712 NKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMA 3533
NKKMR+AISRKLPSSRG VTQSG+ NEYEFEGK+VYRHLQDGD+VLVNRQPTLHKPSIMA
Sbjct: 521 NKKMRVAISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMA 580
Query: 3532 HVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTR 3353
HVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNANEQYIVPT+
Sbjct: 581 HVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTK 640
Query: 3352 GDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSRKVSLVDS 3173
GDTVRGLIQDHIV AV+LTMK+TFLT EFNQLLYGSGVFA P GN+S KVS+VD
Sbjct: 641 GDTVRGLIQDHIVGAVILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDF 700
Query: 3172 EGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYFTDST----Y 3005
EGV+Q+VLPAVWKP PLWTGKQVITALLNH+T+GCAPCTVKN+GK+P YF + Y
Sbjct: 701 EGVVQTVLPAVWKPKPLWTGKQVITALLNHLTKGCAPCTVKNKGKIPYPYFLSESRLVEY 760
Query: 3004 KSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGIFLSALSR 2825
+S +E++ D+ AE++ LIWKNELVRGVIDKAQFGKFGLVHT+QELYGSN AGI LSALSR
Sbjct: 761 QSREEQE-DRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSR 819
Query: 2824 LFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEGEDVGEEVHCNFVKFKRGQIGPEELQL 2645
LFTIFLQ+HGFTCGVDDL+ILP+YD RKE+LEG+DVGEE HC+FVKFKRG+IGP ELQL
Sbjct: 820 LFTIFLQLHGFTCGVDDLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPLELQL 879
Query: 2644 EIEKVICSNRESATASLDMKMKNKLTDKGSQISKKLLTKGLLKPFPKNCISVMTTTGAKG 2465
EIEK + SN+E+ATA+LDMKMKNKL +KGSQ +K+LL KGLLKPFP+NCI++MT TGAKG
Sbjct: 880 EIEKAMSSNKEAATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKG 939
Query: 2464 STVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFITDRFLTGLRPQEY 2285
STVNFQQISSYLGQQELEGKRVPRMVSGKTLPCF PWD SRAGG+++DRFL+GLRPQEY
Sbjct: 940 STVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEY 999
Query: 2284 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQFYYGEDGV 2105
YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKV YDYTVRDADGSIIQFYYGEDGV
Sbjct: 1000 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGV 1059
Query: 2104 DVHRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDGLEKEARHFIREARKETSEV 1925
DVHRTSFLKNFKAL +NQETIC+K ++ R+ N+YIEKLPDGLE++ +HF K T ++
Sbjct: 1060 DVHRTSFLKNFKALKNNQETICQKLRHGRKLNSYIEKLPDGLEEKVKHF---WEKRTKKL 1116
Query: 1924 QKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQKYLSSLAQSGEPVGVIAAQ 1745
+K K K +KE +++ K +E+ +FLEL+ QKY SSLA SGEPVGV+A Q
Sbjct: 1117 EK--------KLGKLVKKEEMVKQLK---EEEADFLELVRQKYFSSLADSGEPVGVLAGQ 1165
Query: 1744 SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFMQYRYKPDV 1565
SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS+ IKTPILTCPF+ ++ K D
Sbjct: 1166 SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDA 1225
Query: 1564 MYLVSNVKKVSIADLAESMEVE---LSINHQQVARIYKLKMNLKATEFVSLEDLHATLRS 1394
L++ VKK+++AD+ ESMEV+ LSI + QV+++YKL + LK +FVS ED TL+
Sbjct: 1226 QSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDFVSSEDCEYTLKF 1285
Query: 1393 TFLRELEDAIENHVVFLSRVSGIKNFTLSSPSETLTEADNNSTVRSXXXXXXXXXXXXXE 1214
FLRELEDAIE+H+ LS+++GI+NF SS S E + N++ + E
Sbjct: 1286 VFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENAS-STRHEEEMLDDEDEDE 1344
Query: 1213 RGEDLGSDVQKRKQQSTDEMDYDDGSEAEPDEGELSSELEKGQTYQ-DHLEEADNRKXXX 1037
R EDL SD QKRKQQ+TDEMDYDD + DE E ++E+E ++ Q D ++ D +
Sbjct: 1345 RTEDLSSDAQKRKQQTTDEMDYDD--DENEDEAETTAEIEDEKSEQTDEIDNGDEEEIGN 1402
Query: 1036 XXXXXXXEASNMQNDRETKSESKSSRAGAKSTAKTNEKSGEEFSDKKPRRAIYIAVKGLH 857
D + ++S S+ K+T K N+K E S K R +++ V+GLH
Sbjct: 1403 RGNEEQMSKLQSTEDDISNTKSSKSKTKTKTTVKQNKKK-ERRSKKDSDRCVFVDVEGLH 1461
Query: 856 FEVHFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKTVIWDDDKKPKKS 677
FEVHF+F EPH+LLAQ+AQKTAKKVYIK+SGKI C+MVKY+ E TV+WD+ + +
Sbjct: 1462 FEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEYQTKQ-- 1519
Query: 676 TVKDLQTDNEDLAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAARATI 497
Q+ + D AYWA+KA+GVDF +FWEMQDDLD++R+Y+NNI AML TYGVEAARA+I
Sbjct: 1520 -----QSQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASI 1574
Query: 496 IREVKQVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETASKF 317
+REVK VF IYGV+ID+RHLSLIAD+MTH GGY+PM+RHGSI+ESLSPF+KMSFETASKF
Sbjct: 1575 LREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKF 1634
Query: 316 IVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQKLEV 194
IVEAA+HG+TDNLETPSSRICLGLPVKMGTGCFD+MQKL++
Sbjct: 1635 IVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI 1675
>ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
sylvestris]
Length = 1681
Score = 2196 bits (5690), Expect = 0.0
Identities = 1134/1729 (65%), Positives = 1339/1729 (77%), Gaps = 16/1729 (0%)
Frame = -3
Query: 5332 EGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDENFACK 5153
+GA+EAVEAV F FMTDEEVR HSVVK+T+PNLLDTL P+ GGLYDPAMGPL E CK
Sbjct: 3 QGASEAVEAVHFSFMTDEEVRKHSVVKVTSPNLLDTLGGPLPGGLYDPAMGPLSERSQCK 62
Query: 5152 SCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCVTQLE 4973
SCGQ + HCPGHCGHI+LVSPV+NPLLFNMLHNLL +TCF+CFHFR+S+ EV+ CV++LE
Sbjct: 63 SCGQGTVHCPGHCGHIELVSPVFNPLLFNMLHNLLQRTCFYCFHFRASKEEVEKCVSELE 122
Query: 4972 QIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQKHSEHN 4793
IA+GD+IG K +++ +SEGSH+S Q SE+N
Sbjct: 123 LIAKGDVIGPKTMDV------------LSPDNSADREESEGSHMSCTTDDLKLQDRSEYN 170
Query: 4792 KQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIRSNA 4613
K+ WD+ QFTEA+ V++ L KP+FG FHM +S QI N
Sbjct: 171 KRPSWDNFQFTEAMAVIDRILKTKSEKCSNCETKNPKINKPSFGRFHMD-ISSKQIIFNY 229
Query: 4612 TRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKKPMHQA 4433
+ S++ Q G ++ ++ + M +
Sbjct: 230 IKKSQMFNLQRTGGSEENLSPEVVNATEP--------LGEAETSLSMASSDRLENSMARG 281
Query: 4432 RNFSQE--LEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGESGKVT 4259
R +E + + K+ FS LPS+VR I+ LWENEA +C++ C+I KV
Sbjct: 282 RQGDEEYIVMQQKDLFSVAHLPSQVRKIIEHLWENEARLCAFFCNIQGQHL--NTPSKVA 339
Query: 4258 SHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFI 4079
SMFFL+SILVPPI+FRPPAKGGDSVMEHPHT+LLGKVLQSNIALGNAH N A RSK I
Sbjct: 340 GPSMFFLDSILVPPIRFRPPAKGGDSVMEHPHTVLLGKVLQSNIALGNAHSNRAGRSKII 399
Query: 4078 NRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRSVIS 3899
+R MDLQQS+N+L+DSKTA GPG+KD+ GICQLLEKKEGIFRQKMMGKRVNFACRSVIS
Sbjct: 400 SRLMDLQQSVNILFDSKTAAGPGQKDVGVGICQLLEKKEGIFRQKMMGKRVNFACRSVIS 459
Query: 3898 PDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVSTVKL 3719
PDPYL+VNEIGVPPYFALRLTYPERVTPWN+ K+R++IINGP+ HPGA ++ D++STVKL
Sbjct: 460 PDPYLSVNEIGVPPYFALRLTYPERVTPWNAGKMRDSIINGPENHPGALSFADRISTVKL 519
Query: 3718 PSN-----KKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTL 3554
PS KK+R+AISRKLPSSRG VTQSG+ +EYEFEGK+VYRHLQDGDIVLVNRQPTL
Sbjct: 520 PSGNGKNIKKIRMAISRKLPSSRGAVTQSGRNDEYEFEGKVVYRHLQDGDIVLVNRQPTL 579
Query: 3553 HKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANE 3374
HKPSIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNANE
Sbjct: 580 HKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANE 639
Query: 3373 QYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSR 3194
QYIVPT+GDTVRGLIQDHIV AVLLTMK+TFLT EFNQLLYGSGVFA PGS GN+S
Sbjct: 640 QYIVPTKGDTVRGLIQDHIVGAVLLTMKNTFLTLQEFNQLLYGSGVFAAGPGSTSGNHSN 699
Query: 3193 KVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYFTD 3014
KVS+VDSEGV+Q++LPAVWKP PLWTGKQVITALLNH+T+G PCTVKN+GK+P YF
Sbjct: 700 KVSVVDSEGVVQTILPAVWKPKPLWTGKQVITALLNHLTKGSPPCTVKNKGKIPYPYFLS 759
Query: 3013 ST----YKSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGI 2846
+ Y+S +EE+ D+ AE+K LIWKNELVRGVIDKAQFGKFGLVHT+QELYG+N AGI
Sbjct: 760 QSRLAEYQSREEEE-DRTAENKFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGANRAGI 818
Query: 2845 FLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEGEDVGEEVHCNFVKFKRGQI 2666
LSALSRLFTIFLQ+HGFTCG+DDL+ILP+YD RKE+LEG DVGE+ HC+FVKFK G+I
Sbjct: 819 LLSALSRLFTIFLQLHGFTCGIDDLVILPHYDIRRKEELEGGDVGEDAHCDFVKFKPGEI 878
Query: 2665 GPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQISKKLLTKGLLKPFPKNCISVM 2486
GP ELQLEIEK I N+E+ATA+LDMKMKNKL +KGSQ +K+LL KGLLKPFP+NCI++M
Sbjct: 879 GPLELQLEIEKAISGNKEAATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALM 938
Query: 2485 TTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFITDRFLT 2306
T TGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCF PWDF SRAGG+++DRFL+
Sbjct: 939 TITGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDFASRAGGYVSDRFLS 998
Query: 2305 GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQF 2126
GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKV YDYTVRDADGSIIQF
Sbjct: 999 GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQF 1058
Query: 2125 YYGEDGVDVHRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDGLEKEARHFIREA 1946
YYGEDGVDVHRTSFLKNFKAL DNQETIC+K + R+ N+YIE+LPDGLE++ + F
Sbjct: 1059 YYGEDGVDVHRTSFLKNFKALKDNQETICQKLRQGRKLNSYIERLPDGLEEKVKQF---W 1115
Query: 1945 RKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQKYLSSLAQSGEP 1766
K+T +++K EK + K++E K +KE+ +FLEL+ QKY SSLA SGEP
Sbjct: 1116 GKKTKKLEKKLEK-------RVKKEEIS----KQLKKEEVDFLELVGQKYFSSLADSGEP 1164
Query: 1765 VGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFMQ 1586
VGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASD IKTPI+TCPF+
Sbjct: 1165 VGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDAIKTPIMTCPFLG 1224
Query: 1585 YRYKPDVMYLVSNVKKVSIADLAESMEVE---LSINHQQVARIYKLKMNLKATEFVSLED 1415
++ K D L++ VKK+++AD+ ESMEV LSI + QV+++YKL + LK EFVS ED
Sbjct: 1225 WKSKDDAQSLLAEVKKITVADMIESMEVNLLPLSIYNHQVSQLYKLTVKLKEHEFVSSED 1284
Query: 1414 LHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTLSSPSETLTEADNN--STVRSXXXXX 1241
TL+ FLRELEDAIE+H+ LS+++GIKNF SS S E + N ST
Sbjct: 1285 CDYTLKYVFLRELEDAIESHLALLSKINGIKNFKSSSDSVASHETEENASSTRYEEHMLD 1344
Query: 1240 XXXXXXXXERGEDLGSDVQKRKQQSTDEMDYDDGSEAEPDEGELSSELEKGQTYQDHLEE 1061
EDL SD QKRKQQ+TDEMDYDDG E E E E ++E+E ++ Q H E
Sbjct: 1345 DDDEAEDERTEEDLSSDAQKRKQQTTDEMDYDDGPEDEASEAETTAEVEDEKSDQAH--E 1402
Query: 1060 ADNRKXXXXXXXXXXEASNMQNDRETKSESKSSRAGAKSTAKTNEKSGEEFSDKKPRRAI 881
NR E ++ E S K++++ K+T + +K E S K R++
Sbjct: 1403 IGNRDEEETGDHGNEEQTSKLYSEE--SNIKTAKSKTKTTVQQKKKK-ETRSKKDSDRSV 1459
Query: 880 YIAVKGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKTVIWD 701
+IAV+GLHFEVHF+F EPH+LLAQ+AQKTAKKVYIK++GKI C+MVKYD E TV+W
Sbjct: 1460 FIAVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNAGKIDQCRMVKYDVSENTVMW- 1518
Query: 700 DDKKPKKSTVKDLQTDNEDLAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYG 521
D+K+ K Q+ + D AYWA+KA+GVDF +FWEMQDDLD++R+Y+NNI +ML TYG
Sbjct: 1519 DEKQTKN------QSQDTDSAYWALKAAGVDFGTFWEMQDDLDVNRIYTNNIRSMLNTYG 1572
Query: 520 VEAARATIIREVKQVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKM 341
VEAARA IIREVK VF IYGV+ID+RHLSLIADYMTH GGY+PM+RHGSI+ESLSPF+KM
Sbjct: 1573 VEAARAAIIREVKTVFGIYGVEIDFRHLSLIADYMTHTGGYQPMSRHGSISESLSPFLKM 1632
Query: 340 SFETASKFIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQKLEV 194
SFETASKFIVEAASHG+TDNLETPSSRICLGLPVKMGTGCFD+MQKL++
Sbjct: 1633 SFETASKFIVEAASHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI 1681
>emb|CDP10074.1| unnamed protein product [Coffea canephora]
Length = 1680
Score = 2196 bits (5689), Expect = 0.0
Identities = 1141/1733 (65%), Positives = 1322/1733 (76%), Gaps = 16/1733 (0%)
Frame = -3
Query: 5347 MAQSTEG-ATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLD 5171
MAQ+TEG A+EAVE V F FMT EEVR HSVVK+ NP LLDT+ +P+ GGLYDPAMGP D
Sbjct: 1 MAQTTEGGASEAVEKVLFSFMTSEEVRKHSVVKIKNPVLLDTVGRPMPGGLYDPAMGPFD 60
Query: 5170 ENFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKN 4991
E CKSCGQRS+HC GHCGHI+LVSP YNPLLFNML+NLL +TCF+CFHFRSS EV
Sbjct: 61 EQSPCKSCGQRSFHCTGHCGHIELVSPAYNPLLFNMLYNLLQRTCFYCFHFRSSTEEVDK 120
Query: 4990 CVTQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQ 4811
CV QLE+IA+GD+IGAKRL+ DSEGSH+S ++ +
Sbjct: 121 CVLQLERIAKGDVIGAKRLDAASSAD------------LDNSEDSEGSHVSCGNVYHGAE 168
Query: 4810 KHSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGN 4631
EH KQ WDS QFTEA+ VLN FL KPTFGWFHM +S
Sbjct: 169 ---EHMKQPSWDSFQFTEAMSVLNMFLKPKLSKCGKCEAKNPKIKKPTFGWFHMV-VSNA 224
Query: 4630 QIRSNATRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKK 4451
+ R+N R RL ++ G E++ W+ K
Sbjct: 225 ETRANIIRGHRLDGFRSGGSEERSSSEVVNANDSLWEDDSQTGKTASYTVSDGIDTPVAK 284
Query: 4450 KPMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGES 4271
K +Q +EL+K K FS LLPSEVRD+V+RLWENEAP+CS+ICD+ H +
Sbjct: 285 KSPNQPGRVGEELKKQKEAFSEHLLPSEVRDVVKRLWENEAPLCSFICDLQREQ--HNSA 342
Query: 4270 GKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAER 4091
+ +SMFFL+SILVPPIKFRP A+ GD+VMEHPHT LL KVLQSNIALGNA++N+AER
Sbjct: 343 AGIAGYSMFFLDSILVPPIKFRPLARTGDAVMEHPHTNLLSKVLQSNIALGNAYINNAER 402
Query: 4090 SKFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACR 3911
K +NRWMDLQQSI+VLYDSKT TG +K GICQLLEKKEGIFRQKMMGKRVNFACR
Sbjct: 403 YKIVNRWMDLQQSISVLYDSKTTTGQSQKAGPVGICQLLEKKEGIFRQKMMGKRVNFACR 462
Query: 3910 SVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVS 3731
SVISPDPYLAVNEIGVPPYFALRLTYPERVTPWN KLR AI+NGP+IHPGA +Y DKVS
Sbjct: 463 SVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNVGKLRGAIVNGPEIHPGALSYTDKVS 522
Query: 3730 TVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTLH 3551
TVKLPS+KKMRIAISRKLPSSRGVVTQ GK +E+EFEGK+VYRHLQDGD+VLVNRQPTLH
Sbjct: 523 TVKLPSSKKMRIAISRKLPSSRGVVTQLGKNSEHEFEGKVVYRHLQDGDVVLVNRQPTLH 582
Query: 3550 KPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQ 3371
KPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDE+NVHFPQDEISRAEAYNIVNANEQ
Sbjct: 583 KPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQ 642
Query: 3370 YIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSRK 3191
YIVPTRGDTVRGLIQDHI SAVLLTMKDTFLT DEFNQLLYGSGVF N S K
Sbjct: 643 YIVPTRGDTVRGLIQDHIGSAVLLTMKDTFLTYDEFNQLLYGSGVFTTGSSCTFSNYSGK 702
Query: 3190 VSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYFTDS 3011
+S+VDSEG++Q +LPAV KP PLWTGKQVITALLN +T+GCAPC+++ + K+PK YF
Sbjct: 703 ISIVDSEGIIQPILPAVLKPKPLWTGKQVITALLNQLTKGCAPCSIEKEMKIPKQYFPTE 762
Query: 3010 TY-----KSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGI 2846
TY +++D+E+ ++ A++ LL+WKNELVRGVIDKAQFG+FGLVH++QELYG+N+AG+
Sbjct: 763 TYEVQQSENDDKENDEKKADNCLLVWKNELVRGVIDKAQFGQFGLVHSIQELYGANTAGL 822
Query: 2845 FLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEGEDVGEEVHCNFVKFKRGQI 2666
LSALSRLFT+FLQ+HGFTCGV+DLIILP++D RKE+LEGEDVGE+VHC FV FKRGQI
Sbjct: 823 LLSALSRLFTMFLQMHGFTCGVEDLIILPHFDLRRKEELEGEDVGEDVHCEFVNFKRGQI 882
Query: 2665 GPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQISKKLLTKGLLKPFPKNCISVM 2486
GP ELQLEIEKVIC +RE+ATASLDMKMKNKLT K SQISK+LL KGLLKPFPKNCIS+M
Sbjct: 883 GPLELQLEIEKVICRDREAATASLDMKMKNKLTKKASQISKELLLKGLLKPFPKNCISLM 942
Query: 2485 TTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFITDRFLT 2306
T +GAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCF PWDFTSRAGG+ITDRFL+
Sbjct: 943 TISGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGYITDRFLS 1002
Query: 2305 GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQF 2126
GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKV YDYTVRDADGSI+QF
Sbjct: 1003 GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIVQF 1062
Query: 2125 YYGEDGVDVHRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDGLEKEARHFIREA 1946
YYGEDGVDVHRTSFLKN +ALA NQ + +K++ +R+FN YI +LPDGL+++A F++
Sbjct: 1063 YYGEDGVDVHRTSFLKNLRALALNQVPVRQKYERERDFNAYIVELPDGLKRKAEGFLKGV 1122
Query: 1945 RKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQKYLSSLAQSGEP 1766
++ H+ +F+ L+ QKYLSSLA SGEP
Sbjct: 1123 NTDS----------HM------------------------DFMTLLAQKYLSSLAPSGEP 1148
Query: 1765 VGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFMQ 1586
VGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ IKTP++TCPF+Q
Sbjct: 1149 VGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAQVIKTPVMTCPFLQ 1208
Query: 1585 YRYKPDVMYLVSNVKKVSIADLAESMEVE---LSINHQQVARIYKLKMNLKATEFVSLED 1415
++ D LV+ VKK+++AD+ ESMEV LS+ + + IYKL M K EF S ED
Sbjct: 1209 FKSMDDAKSLVAKVKKITVADIIESMEVHLLPLSVLNNGIGIIYKLMMTFKHHEFASSED 1268
Query: 1414 LHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTLSSPSETLTEADNNSTVRSXXXXXXX 1235
TLR +FLRELEDAI+NH+V LSR+SGIKN ++ S+ ++ S V S
Sbjct: 1269 CKETLRHSFLRELEDAIQNHLVLLSRISGIKNIMSNTRSKGNETDEDASGVTSHEEGDDE 1328
Query: 1234 XXXXXXERG-----EDLGSDVQKRKQQSTDEMDYDDGSEAEPDEGELSSELEKGQTYQDH 1070
+G EDLGSD QKRKQQ+TDEMDY+D + E E +++ E+G+ Q +
Sbjct: 1329 NDDGDGGKGNDDMAEDLGSDAQKRKQQATDEMDYEDIT-----EDESTADHEQGKDGQSN 1383
Query: 1069 LEEADNRKXXXXXXXXXXEASNMQNDRETKSESKSSRAGAKSTAKTNEKSGEEFSDKKPR 890
+E + R+ A M++D E S+ KS KST K +K+ ++F K+
Sbjct: 1384 -DEGEIREGKEAMDVDDEHAIEMEHDNEEMSKPKSGNKNGKSTLKKRKKAEKKFVRKETD 1442
Query: 889 RAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKTV 710
R I++ V+G FE HF FT EPH+LLAQIAQKTAK VYIKSSGKI+ CKMV++D E TV
Sbjct: 1443 RNIFVEVEGQKFEAHFGFTNEPHILLAQIAQKTAKHVYIKSSGKINQCKMVEHDVSENTV 1502
Query: 709 IWDDDKKPKKSTVKDLQTDNED--LAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAM 536
IWD K KK K N D L YWA+KA+GVDF FWEMQDDLD +R+YSN+I AM
Sbjct: 1503 IWDAKKVDKKIKAKKQMKANVDDLLPYWALKAAGVDFIPFWEMQDDLDTARIYSNSIHAM 1562
Query: 535 LKTYGVEAARATIIREVKQVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLS 356
L+TYGVEAARATIIREV VF IYGV+IDYRHLSLIADYMTH+GGYRPM+RHGSIAESLS
Sbjct: 1563 LETYGVEAARATIIREVTNVFGIYGVQIDYRHLSLIADYMTHSGGYRPMSRHGSIAESLS 1622
Query: 355 PFIKMSFETASKFIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQKLE 197
P KMSFETA KFIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQ+L+
Sbjct: 1623 PLAKMSFETAGKFIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQQLD 1675
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Solanum
lycopersicum]
Length = 1677
Score = 2189 bits (5671), Expect = 0.0
Identities = 1113/1722 (64%), Positives = 1334/1722 (77%), Gaps = 9/1722 (0%)
Frame = -3
Query: 5332 EGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDENFACK 5153
+GA+E VEAV F FMTDEEVR HSVVK+T+PNLLD L+ P+ GLYDPAMGPLD CK
Sbjct: 3 QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62
Query: 5152 SCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCVTQLE 4973
C Q + C GHCGHI+LVSPVYNPLLFNMLHNLL +TCF+CFHFR+SR EV+ CV++LE
Sbjct: 63 FCSQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120
Query: 4972 QIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQKHSEHN 4793
IA+GD++GAK ++ +SEGSH+S + + H E+N
Sbjct: 121 LIAKGDVVGAKMIDA------------LSPDNSTDREESEGSHMSCTMDDLNVRDHCEYN 168
Query: 4792 KQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIRSNA 4613
K+ WD+ QFTEA+ V++ L KP+FG FHM +S QIR N
Sbjct: 169 KRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENY 227
Query: 4612 TRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKKPMHQA 4433
R + G ++ K +K+ Q
Sbjct: 228 INSGRRFNLHDTGGSEENPSPEVVNATEP--LGEAETSLCVTSTDGVENSKGRKR---QG 282
Query: 4432 RNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGESGKVTSH 4253
+ S +E+ K+ FS LPS+VR I+ LWENEAP+C++ CDI SGKV
Sbjct: 283 GDQSDVVEQQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQH--RNTSGKVAGP 340
Query: 4252 SMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFINR 4073
SMFFL+SILVPP+KFRPPAKGGDS+MEHPHT+LLGKV+Q+NIALGNAH+N A RSK I+R
Sbjct: 341 SMFFLDSILVPPVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISR 400
Query: 4072 WMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRSVISPD 3893
MDLQQS+NVL+DSKTA+GPG+KD+ SGICQ+LEKKEGIFRQKMMGKRVNFACRSVISPD
Sbjct: 401 LMDLQQSVNVLFDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPD 460
Query: 3892 PYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVSTVKLPS 3713
PYL+VNEIG+PPYFA RLTYPER+TPWN+VK+R+A+INGP+ HPGA ++ D+++TVKLPS
Sbjct: 461 PYLSVNEIGIPPYFASRLTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPS 520
Query: 3712 NKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMA 3533
NKKMR+AISRKLPSSRG VTQSG+ NEYEFEGK+VYRHLQDGD+VLVNRQPTLHKPSIMA
Sbjct: 521 NKKMRVAISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMA 580
Query: 3532 HVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTR 3353
HVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNANEQYIVPT+
Sbjct: 581 HVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTK 640
Query: 3352 GDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSRKVSLVDS 3173
GDTVRGLIQDHIV AV+LTMK+TFL+ EFNQLLYGSGVFA P GN+S KVS+VD
Sbjct: 641 GDTVRGLIQDHIVGAVILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDF 700
Query: 3172 EGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYFTDST----Y 3005
EGV+Q+VLPAVWKP PLWTGKQVITALLNH+T GC PCTVKN+GK+P YF + Y
Sbjct: 701 EGVVQTVLPAVWKPKPLWTGKQVITALLNHLTNGCPPCTVKNKGKIPYAYFLSESRLVEY 760
Query: 3004 KSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGIFLSALSR 2825
+S +E++ D+ AE++ LIWKNELVRGVIDKAQFGKFGLVHT+QELYGSN AGI LSALSR
Sbjct: 761 QSREEQE-DRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSR 819
Query: 2824 LFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEGEDVGEEVHCNFVKFKRGQIGPEELQL 2645
LFTIFLQ+HGFTCG+DDL+ILP+YD RKE+LEG+DVGEE HC+FVKFKRG+IGP ELQL
Sbjct: 820 LFTIFLQLHGFTCGIDDLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPLELQL 879
Query: 2644 EIEKVICSNRESATASLDMKMKNKLTDKGSQISKKLLTKGLLKPFPKNCISVMTTTGAKG 2465
EIEK I SN+E ATA+LDMKMKNKL +KGSQ +K+LL KGLLKPFP+NCI++MT TGAKG
Sbjct: 880 EIEKAISSNKEVATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKG 939
Query: 2464 STVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFITDRFLTGLRPQEY 2285
STVNFQQISSYLGQQELEGKRVPRMVSGKTLPCF WD SRAGG+++DRFL+GLRPQEY
Sbjct: 940 STVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQEY 999
Query: 2284 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQFYYGEDGV 2105
YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKV YDYTVRDADGSIIQFYYGEDGV
Sbjct: 1000 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGV 1059
Query: 2104 DVHRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDGLEKEARHFIREARKETSEV 1925
DVHRTSFLKNFKAL +NQETIC+K ++ + N+YIEKLPDGL ++ +HF
Sbjct: 1060 DVHRTSFLKNFKALKNNQETICQKLRHGCKLNSYIEKLPDGLGEKVKHF----------W 1109
Query: 1924 QKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQKYLSSLAQSGEPVGVIAAQ 1745
+ T+K G K++E K ++E+ +FLEL+ QKY SSLA SGEPVGV+A Q
Sbjct: 1110 ESKTKKLEKKLGMLVKKEEMV----KQLKEEEADFLELVGQKYFSSLADSGEPVGVLAGQ 1165
Query: 1744 SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFMQYRYKPDV 1565
SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS+ IKTPI+TCPF+ ++ K D
Sbjct: 1166 SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKNDA 1225
Query: 1564 MYLVSNVKKVSIADLAESMEVE---LSINHQQVARIYKLKMNLKATEFVSLEDLHATLRS 1394
L++ VKK+++AD+ ESMEV+ LSI + QV+++YKL + LK +FVS ED TL+
Sbjct: 1226 QSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDFVSSEDCEYTLKF 1285
Query: 1393 TFLRELEDAIENHVVFLSRVSGIKNFTLSSPSETLTEADNN-STVRSXXXXXXXXXXXXX 1217
FLRELEDAIE+H+ LS+++GI+NF SS S E + N S+ R
Sbjct: 1286 VFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRREEEMLDDDDDDED 1345
Query: 1216 ERGEDLGSDVQKRKQQSTDEMDYDDGSEAEPDEGELSSELEKGQTYQ-DHLEEADNRKXX 1040
ER EDL SD QKRKQQ+TDEMDYDD + E E ++E+E ++ Q D ++ D +
Sbjct: 1346 ERTEDLSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNGDEEE-- 1403
Query: 1039 XXXXXXXXEASNMQNDRETKSESKSSRAGAKSTAKTNEKSGEEFSDKKPRRAIYIAVKGL 860
S +Q+ E S +K+S++ K+T K +K E S K R +++ V+GL
Sbjct: 1404 NGDRGNEEHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKK-ERRSKKDSDRCVFVDVEGL 1462
Query: 859 HFEVHFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKTVIWDDDKKPKK 680
HFEVHF+F EPH+LLAQ+AQKTAKKVY+K+SGKI C+MVKY+ E TV+WD+++ +
Sbjct: 1463 HFEVHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDENQTKQ- 1521
Query: 679 STVKDLQTDNEDLAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAARAT 500
Q + D AYWA+KA+GVDF +FWEMQDDLD++R+Y+NNI AML TYGVEAARA+
Sbjct: 1522 ------QRQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARAS 1575
Query: 499 IIREVKQVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETASK 320
I+REVK VF IYGV+ID+RHLSLIAD+MTH GGY+PM+RHGSI+ESLSPF+KMSFETASK
Sbjct: 1576 ILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASK 1635
Query: 319 FIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQKLEV 194
FIVEAA+HG+TDNLETPSSRICLGLPVKMGTGCFD+MQ+L++
Sbjct: 1636 FIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQELDI 1677
>ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
tomentosiformis]
Length = 1938
Score = 2118 bits (5487), Expect = 0.0
Identities = 1096/1676 (65%), Positives = 1293/1676 (77%), Gaps = 19/1676 (1%)
Frame = -3
Query: 5164 FACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCV 4985
F CKSCGQ + HCPGHCGHI+LVSPV+NPLLFNMLHNLL +TCF+CFHFR+S+ EV+ CV
Sbjct: 316 FRCKSCGQGTVHCPGHCGHIELVSPVFNPLLFNMLHNLLQRTCFYCFHFRASKEEVEKCV 375
Query: 4984 TQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQKH 4805
++LE IA+GD+IGAK +++ +SEGSH+S + Q
Sbjct: 376 SELELIAKGDVIGAKTMDV------------LSPDNSADREESEGSHMSCTTDDLNLQDR 423
Query: 4804 SEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQI 4625
SE+NK+ WD+ QFTEA+ V++ L KP+FG FHM +S QI
Sbjct: 424 SEYNKRPSWDNFQFTEAMAVIDRILKTKSEKCSNCETKNPKINKPSFGRFHMD-ISSKQI 482
Query: 4624 RSNATRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKKP 4445
N + S+ Q G ++ ++ +
Sbjct: 483 IFNYIKKSQTFNLQCTGGSEENLSPEVVNATEP--------LGEAETSLSMASSGRLENS 534
Query: 4444 MHQARNFSQE--LEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGES 4271
M + R +E + + K+ FS LPS+VR I+ LWENEA +C++ C+I
Sbjct: 535 MARGRQGDEESIVMQQKDLFSVAHLPSQVRKIIEHLWENEARLCAFFCNIQGQHL--NTP 592
Query: 4270 GKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAER 4091
KV SMFFLESILVPPI+FRPPAKGGDSVMEHPHT+LLGKVLQSNIALGNAH N A R
Sbjct: 593 IKVAGPSMFFLESILVPPIRFRPPAKGGDSVMEHPHTVLLGKVLQSNIALGNAHSNQAGR 652
Query: 4090 SKFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACR 3911
SK I+R MDLQQS+NVL+DSKTA GPG+KD+ GICQLLEKKEGIFRQKMMGKRVNFACR
Sbjct: 653 SKIISRLMDLQQSVNVLFDSKTAAGPGQKDVGVGICQLLEKKEGIFRQKMMGKRVNFACR 712
Query: 3910 SVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVS 3731
SVISPDPYL+VNEIGVPPYFALRLTYPERVTPWN+ K+R+AIINGP+ HPGA ++ D++S
Sbjct: 713 SVISPDPYLSVNEIGVPPYFALRLTYPERVTPWNAGKMRDAIINGPENHPGALSFADRIS 772
Query: 3730 TVKLPSN-----KKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNR 3566
TVKLPS KK+R+AISRKLPSSRG VTQSG+ +EYEFEGK+VYRHLQDGDIVLVNR
Sbjct: 773 TVKLPSGNGTNIKKIRMAISRKLPSSRGAVTQSGRNDEYEFEGKVVYRHLQDGDIVLVNR 832
Query: 3565 QPTLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIV 3386
QPTLHKPSIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIV
Sbjct: 833 QPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIV 892
Query: 3385 NANEQYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPG 3206
NANEQYIVPT+GDTVRGLIQDHIV AVLLTMK+TFLT EFNQLLYGSGVFA PGS G
Sbjct: 893 NANEQYIVPTKGDTVRGLIQDHIVGAVLLTMKNTFLTLQEFNQLLYGSGVFAAGPGSTSG 952
Query: 3205 NNSRKVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKD 3026
N+S KVS+VDSEGV+Q++LPAVWKP PLWTGKQVITALLNH+T+G PCTVKN+GK+P
Sbjct: 953 NHSNKVSVVDSEGVVQTILPAVWKPKPLWTGKQVITALLNHLTKGSPPCTVKNKGKIPYP 1012
Query: 3025 YFTD----STYKSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSN 2858
YF + Y+S +EE+ D+ AE+K LIWKNELVRGVIDKAQFGKFGLVHT+QELYG+N
Sbjct: 1013 YFLSLSRLAEYQSREEEE-DRTAENKFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGAN 1071
Query: 2857 SAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEGEDVGEEVHCNFVKFK 2678
AGI LSALSRLFTIFLQ+HGFTCG+DDL+ILP+YD RKE+LEG DVGEE HC+FVKFK
Sbjct: 1072 KAGILLSALSRLFTIFLQLHGFTCGIDDLVILPHYDIRRKEELEGGDVGEEAHCDFVKFK 1131
Query: 2677 RGQIGPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQISKKLLTKGLLKPFPKNC 2498
G+IGP ELQLEIEK I SN+E+ATA+LDMKMKNKL +KGSQ +K+LL KGLLKPFP+NC
Sbjct: 1132 PGEIGPLELQLEIEKAISSNKEAATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNC 1191
Query: 2497 ISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFITD 2318
I++MT TGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCF PWDF SRAGG+++D
Sbjct: 1192 IALMTITGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDFASRAGGYVSD 1251
Query: 2317 RFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGS 2138
RFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKV YDYTVRDADGS
Sbjct: 1252 RFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGS 1311
Query: 2137 IIQFYYGEDGVDVHRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDGLEKEARHF 1958
IIQFYYGEDGVDVHRTSFLKNFKAL DNQETIC+K + R+ N+YIE+LPDGLE++ + F
Sbjct: 1312 IIQFYYGEDGVDVHRTSFLKNFKALKDNQETICQKLRQGRKLNSYIERLPDGLEEKVKQF 1371
Query: 1957 I-REARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQKYLSSLA 1781
++A+K +++K +KE + K K KE+ +FLEL+ QKY SSLA
Sbjct: 1372 WGKKAKKLEKKLEKQVKKEEISKQLK---------------KEEVDFLELVGQKYFSSLA 1416
Query: 1780 QSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILT 1601
SGEPVGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASD IKTPI+T
Sbjct: 1417 DSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDAIKTPIMT 1476
Query: 1600 CPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVE---LSINHQQVARIYKLKMNLKATEF 1430
CPF+ ++ K D L++ VKK+++AD+ ESMEV LSI + QV+++YKL + LK EF
Sbjct: 1477 CPFLGWKSKDDAQSLLAEVKKITVADMIESMEVNLLPLSIYNHQVSQLYKLTVKLKEHEF 1536
Query: 1429 VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTLSSPSETLTEADNN--STVRS 1256
VS ED TL+ FLRELEDAIE+H+ LS+++GIKNF SS S E + N ST
Sbjct: 1537 VSSEDCDYTLKYVFLRELEDAIESHLALLSKINGIKNFKSSSDSVASHETEENASSTRHE 1596
Query: 1255 XXXXXXXXXXXXXERGEDLGSDVQKRKQQSTDEMDYDDGSEAEPDEGELSSELEKGQTYQ 1076
EDL SD QKRKQQ+TDEMDYDDG E E E E ++E+E ++ Q
Sbjct: 1597 EEMLDDDDEAEDERTEEDLSSDAQKRKQQTTDEMDYDDGPEDEASEAETTAEVEDEKSDQ 1656
Query: 1075 DHLEEADNRKXXXXXXXXXXEASNMQNDRETKSESKSSRAGAKSTAKTNEKSGEEFSDKK 896
H E NR E ++ + E S K++++ K+T + +K E S K
Sbjct: 1657 TH--EIGNRDEEETGDHGNEEQTSKLHSEE--SNIKTAKSKTKTTVQQKKKK-ETRSKKD 1711
Query: 895 PRRAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEK 716
R+++IAV+GLHFEVHF+F EPH+LLAQ+AQKTAKKVYIK++GKI C+MVKYD E
Sbjct: 1712 SDRSVFIAVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNAGKIEQCRMVKYDVSEN 1771
Query: 715 TVIWDDDKKPKKSTVKDL--QTDNEDLAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNID 542
TV+WD VK + Q+ + D AYWA+KA+GVDF +FWEMQDD+D++R+Y+NNI
Sbjct: 1772 TVMWD---------VKQIKNQSQDTDSAYWALKAAGVDFGTFWEMQDDIDVNRIYTNNIR 1822
Query: 541 AMLKTYGVEAARATIIREVKQVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAES 362
+ML TYGVEAARA IIREVK VF IYGV+ID+RHLSLIADYMTH GGY+PM+RHGSI+ES
Sbjct: 1823 SMLNTYGVEAARAAIIREVKTVFGIYGVEIDFRHLSLIADYMTHTGGYQPMSRHGSISES 1882
Query: 361 LSPFIKMSFETASKFIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQKLEV 194
LSPF+KMSFETASKFIVEAASHG+TDNLETPSSRICLGLPVKMGTGCFD+MQKL++
Sbjct: 1883 LSPFLKMSFETASKFIVEAASHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI 1938
>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
Length = 1626
Score = 2041 bits (5288), Expect = 0.0
Identities = 1081/1720 (62%), Positives = 1269/1720 (73%), Gaps = 17/1720 (0%)
Frame = -3
Query: 5317 AVEAVKFGFMTDEEVRSHSVVKLTNPNLLDT-LEKPITGGLYDPAMGPLDENFACKSCGQ 5141
AVEAV+FGFM+DEEVR HSVV +TN L+D +KP GGLYDPA+GPL ++ C SCGQ
Sbjct: 3 AVEAVRFGFMSDEEVRKHSVVGITNLKLVDDDTDKPFPGGLYDPALGPLGDSSKCLSCGQ 62
Query: 5140 RSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCVTQLEQIAE 4961
RSYHCPGH GHIDLV PVYNPL F L N+LN CF C HF+ R EV+ CV+QL I +
Sbjct: 63 RSYHCPGHFGHIDLVFPVYNPLSFKFLRNILNTACFSCRHFKVGRLEVETCVSQLHLIRK 122
Query: 4960 GDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQKHSEHNKQGC 4781
GDI GA+RL + + ++GSH + + S+ + + N
Sbjct: 123 GDIAGARRLRSLGGLSD-----------------NQGSHSTGSVVLSESESGQDLNWCRS 165
Query: 4780 WDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWF------HMSGLSGNQIRS 4619
WDS Q TEA+ VLNEF P FGWF H S G IR
Sbjct: 166 WDSIQLTEAMGVLNEFFRKKEKKCKNCESRSPKITNPIFGWFYAVYAIHRSSSKGTHIRE 225
Query: 4618 NATRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKKPMH 4439
+ S P+N KK
Sbjct: 226 GKDKPS----PENSEASSSIISADSPG------------------------NSGKKGSSS 257
Query: 4438 QARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGESGKVT 4259
N ++ LLPSEVR++V +LWENE +CS+ICDI + SG
Sbjct: 258 NKLNLGLVGQRH-------LLPSEVREMVMQLWENEESLCSFICDIQQQQGKL--SGNRM 308
Query: 4258 SHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAERSKFI 4079
+S+FF E+ILV PIKFR P +GG+SVMEHPHT+LLGKVL+SNIAL NA + SKFI
Sbjct: 309 DYSIFFFETILVNPIKFRAPTRGGNSVMEHPHTVLLGKVLESNIALRNA-----QPSKFI 363
Query: 4078 NRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRSVIS 3899
+ WM+LQQSINVL+D K++T KK SGICQLLEKKEG+FRQKMMGKRVNFACRSVIS
Sbjct: 364 SHWMELQQSINVLFDGKSSTS--KKAGVSGICQLLEKKEGVFRQKMMGKRVNFACRSVIS 421
Query: 3898 PDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVSTVKL 3719
PDPYLAVNEIG+PPYFALRLTYPERVTPWN+ KLRNA++NGPDIHPGATTY+D V+T+KL
Sbjct: 422 PDPYLAVNEIGIPPYFALRLTYPERVTPWNATKLRNAVVNGPDIHPGATTYIDSVATMKL 481
Query: 3718 PSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTLHKPSI 3539
P NKK R+A+SRKLPSSRG + G+ ++ +FEGK+VYRHLQDGDIVLVNRQPTLHKPSI
Sbjct: 482 PLNKKARVALSRKLPSSRGATAEVGE-SQLDFEGKVVYRHLQDGDIVLVNRQPTLHKPSI 540
Query: 3538 MAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVP 3359
MAHVVRVLKGE+TLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVP
Sbjct: 541 MAHVVRVLKGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVP 600
Query: 3358 TRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSRKVSLV 3179
TRGDTVRGLIQDHIV+AVLLT+K TFLT EFNQLLYGSGVFA+ S+ N+S+KVS
Sbjct: 601 TRGDTVRGLIQDHIVAAVLLTLKRTFLTCSEFNQLLYGSGVFALGRHSYVSNSSQKVSGH 660
Query: 3178 DSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYFTDSTYKS 2999
+G++ +LPA+WKP PLWTGKQVI+ALLNHITRG APC VKNQ KLP YFTD+ +
Sbjct: 661 APDGLINPILPAIWKPEPLWTGKQVISALLNHITRGFAPCIVKNQTKLPSTYFTDNP--A 718
Query: 2998 EDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGIFLSALSRLF 2819
++ED DQNAE+ L+WKNELVRGVIDKAQFGKFGLVHTVQELYGS SAG L+A SRLF
Sbjct: 719 MEDEDEDQNAENNFLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSESAGNLLTAFSRLF 778
Query: 2818 TIFLQIHGFTCGVDDLIILPNYDKERKEKLEGEDVGEEVHCNFVKFKRGQIGPEELQLEI 2639
T+FLQIHGFTCGVDDL+ILP+YD +RKEKLE EDVGEEVHC+F+ FK GQIG EELQLEI
Sbjct: 779 TMFLQIHGFTCGVDDLMILPDYDVKRKEKLEQEDVGEEVHCDFINFKPGQIGREELQLEI 838
Query: 2638 EKVICSNRESATASLDMKMKNKLTDK----GSQISKKLLTKGLLKPFPKNCISVMTTTGA 2471
EK IC +RESATA LDMKMKNKLT K GSQ+ K LLT GLLKPFP+NCISVMTTTGA
Sbjct: 839 EKAICRDRESATALLDMKMKNKLTMKLTTEGSQVLKHLLTDGLLKPFPQNCISVMTTTGA 898
Query: 2470 KGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFITDRFLTGLRPQ 2291
KGSTVNFQQIS+YLGQQELEGKRVPRMVSGKTLP F PWDF SRAGGFITDRFL+GLRPQ
Sbjct: 899 KGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFASRAGGFITDRFLSGLRPQ 958
Query: 2290 EYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQFYYGED 2111
EYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLESLKV YDYTVRDADGSIIQF YGED
Sbjct: 959 EYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVGYDYTVRDADGSIIQFCYGED 1018
Query: 2110 GVDVHRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDGLEKEARHFIREARKETS 1931
GVD H+TSFLKNFKAL++NQETI +KFQNK +FN YI+KLP+GLE+EA HFI++A+ +S
Sbjct: 1019 GVDAHKTSFLKNFKALSNNQETIQQKFQNKHQFNFYIKKLPEGLEEEAMHFIQKAQTLSS 1078
Query: 1930 EVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQKYLSSLAQSGEPVGVIA 1751
Q + ++F+ ++EQK+LSSL +GEPVGVIA
Sbjct: 1079 VKQ---------------------------VVDHHKFMRVVEQKFLSSLVPAGEPVGVIA 1111
Query: 1750 AQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFMQYRYKP 1571
AQS+GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS+ I+TP+LTCPF+Q + KP
Sbjct: 1112 AQSIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEVIRTPMLTCPFLQRQSKP 1171
Query: 1570 DVMYLVSNVKKVSIADLAESMEVELSINHQQVARIYKLKMNLKATEFVSLEDLHATLRST 1391
+ + ++SN+KK++IADL ESM+V +S H +V RIYKL+M LK TEFVSLED + TL+++
Sbjct: 1172 NALSVISNLKKITIADLIESMDVSISF-HPKVGRIYKLRMRLKDTEFVSLEDTYKTLKTS 1230
Query: 1390 FLRELEDAIENHVVFLSRVSGIKNFTLSSPSETLTEA--DNNSTVRSXXXXXXXXXXXXX 1217
FL+ELEDA+ENHVVFL +V+ I +F S E L+E D S
Sbjct: 1231 FLKELEDALENHVVFLKKVAVINDFASHSRFEALSEGEEDKASDGAQEAEEEGDDDGGDS 1290
Query: 1216 ERGEDLGSDVQKRKQQSTDEMDYDDGSEAEPDEGELSSELEKGQTYQDHLEEADNRKXXX 1037
+ GEDL SDVQKR+QQ+ D+MDY+D S++E E E + + D E N K
Sbjct: 1291 DAGEDLDSDVQKRRQQARDDMDYEDASDSEQREEEEDLDKANAEEDDDDDENEWNEKCDD 1350
Query: 1036 XXXXXXXEAS--NMQNDRETKSESKSSRAGAKSTAKTNEKSGEEFSDKKPRRAIYIAVKG 863
+S NM K KS A T++ + S + K+ RAIY+ ++G
Sbjct: 1351 DHDDYDQRSSEKNMVEKPILKGRKKSV---AAITSEKIDLSTMPSTGKRENRAIYMEIEG 1407
Query: 862 LHFEVHFKFTMEPHLLLAQIAQKTAKKVYI-KSSGKISHCKMVKYDADEKTVIWDDDKKP 686
L EVHFKFT EPH+LLAQ+ QKTAKKVY+ K+ GK++ CK+V+YD DEKTVIWDDDKK
Sbjct: 1408 LSLEVHFKFTSEPHVLLAQVVQKTAKKVYVKKTGGKLNQCKLVQYDPDEKTVIWDDDKKK 1467
Query: 685 KKSTVKDLQTDNEDLAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAAR 506
+K+T + D +D AYWA+KASG D +SFWEM D LDL+RLY NNI +MLKTYGVEAA
Sbjct: 1468 EKATKNGRKAD-DDAAYWAVKASGSDVESFWEMSDYLDLNRLYCNNIHSMLKTYGVEAAS 1526
Query: 505 ATIIREVKQVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETA 326
ATIIRE+K VFDIYGVKIDYRHLSLI D+M HAGGYRPM+RHGSI +S+SPF+KMSFETA
Sbjct: 1527 ATIIREMKNVFDIYGVKIDYRHLSLIGDHMAHAGGYRPMSRHGSIPDSVSPFLKMSFETA 1586
Query: 325 SKFIVEAASHGMTDNLETPSSRICLGLPVKMGT-GCFDLM 209
SKFIVEAA +G+ D+LE+PSSRICLGLPV++GT G FDLM
Sbjct: 1587 SKFIVEAAIYGLRDDLESPSSRICLGLPVRVGTGGPFDLM 1626
>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
vinifera]
Length = 1691
Score = 1983 bits (5137), Expect = 0.0
Identities = 1050/1752 (59%), Positives = 1262/1752 (72%), Gaps = 34/1752 (1%)
Frame = -3
Query: 5347 MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDE 5168
MA EG TE VEAVKF F TDEEVR +S K+T+P +LD++++P+ GGLYDPA+G +DE
Sbjct: 1 MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60
Query: 5167 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNC 4988
N C+SCGQRS++CPGHCGHIDLVS VYNPLLFN+LHNLL KTCF C HF++S V+
Sbjct: 61 NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120
Query: 4987 VTQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHIS--DVELHSDR 4814
V+QLE I++GD++GAK L+ + S+GSH+S S R
Sbjct: 121 VSQLELISKGDVVGAKNLDSISPSESSYPED------------SDGSHVSCSSTVNSSAR 168
Query: 4813 QKHSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSG 4634
S H KQ W S Q EA+ V++ FL KPTFGWFHM+GLS
Sbjct: 169 DNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSD 228
Query: 4633 NQIRSNATRHSRLGVP-QNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKS 4457
Q R+N R S+L P V E W + +
Sbjct: 229 AQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDT 288
Query: 4456 KKKPMHQ-ARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQH 4280
K + + E K K++FSGPLLPSEVRDI+ RLWENEA +CS+I DI
Sbjct: 289 VTKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERL-- 346
Query: 4279 GESGKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNS 4100
G SG +SMFFLE+ILVPPIKFRPP+KG SVMEHP T+LLGKVLQ+NIALGNAH N+
Sbjct: 347 GASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANN 406
Query: 4099 AERSKFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNF 3920
+ERSK I+RWMDLQQSINVL+D KTA G G++D SGICQLLEKKEG+FRQKMMGKRVNF
Sbjct: 407 SERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNF 466
Query: 3919 ACRSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVD 3740
ACRSVISPDPYLAVNEIG+PPYFALRLTYPE+VTPWN VKLR+AIINGP+IHPGAT YVD
Sbjct: 467 ACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVD 526
Query: 3739 KVSTVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQP 3560
K+STVKL NKKMRI+ISRKLPSSRGVV Q G+ ++ EFEGKIVYRHLQDGDIVLVNRQP
Sbjct: 527 KLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQP 586
Query: 3559 TLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNA 3380
TLHKPSIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNA
Sbjct: 587 TLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNA 646
Query: 3379 NEQYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNN 3200
N QYIVP+RGD +RGLIQDHIVSAVLLT KDTFLTR+++NQLLY SG+ + GS G
Sbjct: 647 NNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGL-SSGSGSFIGKP 705
Query: 3199 SRKVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYF 3020
+KVS++DSE MQ +LPA+WKP PLW+GKQVITA+LNHITRG P T + GK+P++YF
Sbjct: 706 GKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYF 765
Query: 3019 TDSTYKSEDEEDRD-------------QNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTV 2879
+ + + +D ++ E+KLLI KNELVRGVIDKAQF K+GLVH V
Sbjct: 766 GSEIDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMV 825
Query: 2878 QELYGSNSAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLE-GEDVGEEV 2702
QELYGSN+AGI LS LSRLFT+FLQ+HGFTCGVDDL+I PNYD RK +L+ E++GE V
Sbjct: 826 QELYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELV 885
Query: 2701 HCNFVKFKRGQIGPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQISKKLLTKGL 2522
HC F+ G+I P +LQ+E+EK+I SN E+A LD MKN+L + S+++K LL KGL
Sbjct: 886 HCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGL 945
Query: 2521 LKPFPKNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTS 2342
+KPFPKNC+S+MTTTGAKGSTVNF QISS+LGQQ+LEGKRVPRMVSGKTLPCF PWD +
Sbjct: 946 VKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAA 1005
Query: 2341 RAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDY 2162
RAGGFI+DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKV YDY
Sbjct: 1006 RAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDY 1065
Query: 2161 TVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDG 1982
TVRD+DGSI+QF YG+DGVDVH+TSF+ F+ALA N+E +C KF +FN YI+KLP
Sbjct: 1066 TVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKE 1125
Query: 1981 LEKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATE--KEQNEFLELI 1808
L K+ + FI E +EER+ + K+Q +F+ L+
Sbjct: 1126 LRKKTKKFI----------------------------EGFMEERQDFDNMKKQKDFVNLV 1157
Query: 1807 EQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS 1628
+QKY+SSLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA+
Sbjct: 1158 KQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAA 1217
Query: 1627 DTIKTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVEL---SINHQQVARIYKL 1457
+ IKTPI+TCP R K D L + +KKV++AD+ ESMEV + ++ Q IYKL
Sbjct: 1218 NDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKL 1277
Query: 1456 KMNLKATEF------VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTLSSPSE 1295
KM L +SLED TL + F+RELEDAI+NH++ LS++SGIKNF S S
Sbjct: 1278 KMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSM 1337
Query: 1294 TLTEADNNSTVRSXXXXXXXXXXXXXERG--EDLGSDVQKRKQQSTDEMDYDDGSEAEPD 1121
E D +++ + G EDLG D QKRKQQ++DEMDY D SE EPD
Sbjct: 1338 ASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGD-SEGEPD 1396
Query: 1120 EGELSSEL-EKGQTYQDHLEEADNRKXXXXXXXXXXEASNMQNDRETKSESKSSRAGAKS 944
EGE S+ L E+ +D +E ++N + + D + S+SKSS+
Sbjct: 1397 EGEPSAGLTEEIDLVEDEVEISNNEEVGI--------SDPKDEDSKVPSKSKSSK---NK 1445
Query: 943 TAKTNEKSGEEFSDKKPR--RAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYIK 770
AKT K + F K RAI + KG +FEVHF+FT EPH+LLAQIAQK A KVYI+
Sbjct: 1446 KAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIR 1505
Query: 769 SSGKISHCKMVKYDADEKTVIWDDDKKPKKSTVKDLQTDNEDLAYWAMKASGVDFKSFWE 590
SSGKI C+++ + D+ D KK ++ E A++ +GVDF +FW+
Sbjct: 1506 SSGKIDLCQVIDCNKDQVIYYGRDPKK------RENIPGEEKKKLPALQTAGVDFTAFWK 1559
Query: 589 MQDDLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGVKIDYRHLSLIADYMTH 410
MQD+LD+ +YSNN+ AML T+GVEAARATII+EV VF+ YGVK++ RHLSLIAD+MTH
Sbjct: 1560 MQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTH 1619
Query: 409 AGGYRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNLETPSSRICLGLPVKMG 230
+GGYRPM RHG IAES+SPF KM+FETASKFIVEAASHGMTDNLE+ S+RICLGLPVKMG
Sbjct: 1620 SGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMG 1679
Query: 229 TGCFDLMQKLEV 194
TGCFDLMQK+E+
Sbjct: 1680 TGCFDLMQKIEI 1691
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 1982 bits (5136), Expect = 0.0
Identities = 1052/1750 (60%), Positives = 1264/1750 (72%), Gaps = 32/1750 (1%)
Frame = -3
Query: 5347 MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDE 5168
MA EG TE VEAVKF F TDEEVR +S K+T+P +LD++++P+ GGLYDPA+G +DE
Sbjct: 1 MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60
Query: 5167 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNC 4988
N C+SCGQRS++CPGHCGHIDLVS VYNPLLFN+LHNLL KTCF C HF++S V+
Sbjct: 61 NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120
Query: 4987 VTQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHIS--DVELHSDR 4814
V+QLE I++GD++GAK L+ + S+GSH+S S R
Sbjct: 121 VSQLELISKGDVVGAKNLDSISPSESSYPED------------SDGSHVSCSSTVNSSAR 168
Query: 4813 QKHSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSG 4634
S H KQ W S Q EA+ V++ FL KPTFGWFHM+GLS
Sbjct: 169 DNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSD 228
Query: 4633 NQIRSNATRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSK 4454
Q R+N R S+L P N GV+ TK+ +
Sbjct: 229 AQTRANVIRGSKLERPLN-GVDTDETHSSIAPTDGI---------------QDTVTKRLE 272
Query: 4453 KKPMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGE 4274
+K F K K++FSGPLLPSEVRDI+ RLWENEA +CS+I DI G
Sbjct: 273 RKGAQAPIEFI----KQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERL--GA 326
Query: 4273 SGKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAE 4094
SG +SMFFLE+ILVPPIKFRPP+KG SVMEHP T+LLGKVLQ+NIALGNAH N++E
Sbjct: 327 SGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSE 386
Query: 4093 RSKFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFAC 3914
RSK I+RWMDLQQSINVL+D KTA G G++D SGICQLLEKKEG+FRQKMMGKRVNFAC
Sbjct: 387 RSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFAC 446
Query: 3913 RSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKV 3734
RSVISPDPYLAVNEIG+PPYFALRLTYPE+VTPWN VKLR+AIINGP+IHPGAT YVDK+
Sbjct: 447 RSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKL 506
Query: 3733 STVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTL 3554
STVKL NKKMRI+ISRKLPSSRGVV Q G+ ++ EFEGKIVYRHLQDGDIVLVNRQPTL
Sbjct: 507 STVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTL 566
Query: 3553 HKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANE 3374
HKPSIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN
Sbjct: 567 HKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANN 626
Query: 3373 QYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSR 3194
QYIVP+RGD +RGLIQDHIVSAVLLT KDTFLTR+++NQLLY SG+ + GS G +
Sbjct: 627 QYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGL-SSGSGSFIGKPGK 685
Query: 3193 KVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYFTD 3014
KVS++DSE MQ +LPA+WKP PLW+GKQVITA+LNHITRG P T + GK+P++YF
Sbjct: 686 KVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGS 745
Query: 3013 STYKSEDEEDRD-------------QNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQE 2873
+ + + +D ++ E+KLLI KNELVRGVIDKAQF K+GLVH VQE
Sbjct: 746 EIDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQE 805
Query: 2872 LYGSNSAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLE-GEDVGEEVHC 2696
LYGSN+AGI LS LSRLFT+FLQ+HGFTCGVDDL+I PNYD RK +L+ E++GE VHC
Sbjct: 806 LYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHC 865
Query: 2695 NFVKFKRGQIGPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQISKKLLTKGLLK 2516
F+ G+I P +LQ+E+EK+I SN E+A LD MKN+L + S+++K LL KGL+K
Sbjct: 866 KFIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVK 925
Query: 2515 PFPKNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRA 2336
PFPKNC+S+MTTTGAKGSTVNF QISS+LGQQ+LEGKRVPRMVSGKTLPCF PWD +RA
Sbjct: 926 PFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARA 985
Query: 2335 GGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTV 2156
GGFI+DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKV YDYTV
Sbjct: 986 GGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTV 1045
Query: 2155 RDADGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETICRKFQNKREFNTYIEKLPDGLE 1976
RD+DGSI+QF YG+DGVDVH+TSF+ F+ALA N+E +C KF +FN YI+KLP L
Sbjct: 1046 RDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKELR 1105
Query: 1975 KEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATE--KEQNEFLELIEQ 1802
K+ + FI E +EER+ + K+Q +F+ L++Q
Sbjct: 1106 KKTKKFI----------------------------EGFMEERQDFDNMKKQKDFVNLVKQ 1137
Query: 1801 KYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDT 1622
KY+SSLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA++
Sbjct: 1138 KYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAAND 1197
Query: 1621 IKTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVEL---SINHQQVARIYKLKM 1451
IKTPI+TCP R K D L + +KKV++AD+ ESMEV + ++ Q IYKLKM
Sbjct: 1198 IKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKM 1257
Query: 1450 NLKATEF------VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTLSSPSETL 1289
L +SLED TL + F+RELEDAI+NH++ LS++SGIKNF S S
Sbjct: 1258 KLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMAS 1317
Query: 1288 TEADNNSTVRSXXXXXXXXXXXXXERG--EDLGSDVQKRKQQSTDEMDYDDGSEAEPDEG 1115
E D +++ + G EDLG D QKRKQQ++DEMDY D SE EPDEG
Sbjct: 1318 KETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGD-SEGEPDEG 1376
Query: 1114 ELSSEL-EKGQTYQDHLEEADNRKXXXXXXXXXXEASNMQNDRETKSESKSSRAGAKSTA 938
E S+ L E+ +D +E ++N + + D + S+SKSS+ A
Sbjct: 1377 EPSAGLTEEIDLVEDEVEISNNEEVGI--------SDPKDEDSKVPSKSKSSK---NKKA 1425
Query: 937 KTNEKSGEEFSDKKPR--RAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYIKSS 764
KT K + F K RAI + KG +FEVHF+FT EPH+LLAQIAQK A KVYI+SS
Sbjct: 1426 KTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSS 1485
Query: 763 GKISHCKMVKYDADEKTVIWDDDKKPKKSTVKDLQTDNEDLAYWAMKASGVDFKSFWEMQ 584
GKI C+++ + D+ D KK ++ E A++ +GVDF +FW+MQ
Sbjct: 1486 GKIDLCQVIDCNKDQVIYYGRDPKK------RENIPGEEKKKLPALQTAGVDFTAFWKMQ 1539
Query: 583 DDLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGVKIDYRHLSLIADYMTHAG 404
D+LD+ +YSNN+ AML T+GVEAARATII+EV VF+ YGVK++ RHLSLIAD+MTH+G
Sbjct: 1540 DELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSG 1599
Query: 403 GYRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNLETPSSRICLGLPVKMGTG 224
GYRPM RHG IAES+SPF KM+FETASKFIVEAASHGMTDNLE+ S+RICLGLPVKMGTG
Sbjct: 1600 GYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTG 1659
Query: 223 CFDLMQKLEV 194
CFDLMQK+E+
Sbjct: 1660 CFDLMQKIEI 1669
>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
nucifera]
Length = 1676
Score = 1804 bits (4673), Expect = 0.0
Identities = 974/1753 (55%), Positives = 1205/1753 (68%), Gaps = 35/1753 (1%)
Frame = -3
Query: 5347 MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDE 5168
MA TEGATE VEAV+F F+TDEEVR+ S K+TNP + D +E+P+ GGLYDPA+GPLD+
Sbjct: 1 MAHVTEGATEHVEAVRFSFLTDEEVRNLSFKKITNPTIFDNVERPLPGGLYDPALGPLDD 60
Query: 5167 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNC 4988
C+SCGQRS+HCPGHCGHIDLV PVYNPLLF +L LL + CF C F++ +V+
Sbjct: 61 RTPCQSCGQRSFHCPGHCGHIDLVLPVYNPLLFKILFALLQRVCFFCHKFKAKEEQVQKY 120
Query: 4987 VTQLEQIAEGDIIGAKRLN---IHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHS- 4820
+QLE I +GD+ GAK L + +++ +H +D +HS
Sbjct: 121 ASQLELIIKGDVAGAKNLESVLASESSFPDKHELTHKTSESSSLEENDLTHKTDTAIHSV 180
Query: 4819 DRQKHSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGL 4640
D+ + H ++ W S Q+ EA+ VL +F+ PTFGWFHM+ +
Sbjct: 181 DQNCNPMHLQEHHWTSLQYKEAMSVLGDFMKDKHSRCQNCGAKSPSITCPTFGWFHMN-M 239
Query: 4639 SGNQIRSNATRHSRL------GVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXX 4478
S IR+N R +L G Q +
Sbjct: 240 SNADIRANVLRGCKLSDTFVHGAAQRSHTAEAENVDDVLARGDD-ADILESSGAVSDGTL 298
Query: 4477 XXSTKKSKKKPMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIX 4298
T+ KK H +F + + + SGPLLP EV++ +R LW+NEA +CS ICDI
Sbjct: 299 EFVTETDKKIGEHIPPDFFSQ----RKFLSGPLLPPEVKETMRLLWKNEARLCSLICDIQ 354
Query: 4297 XXXXQHGESGKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALG 4118
SG HSMFF E++LVPPIKFRPPAK GDSVMEHP T+LLGKVLQSNIALG
Sbjct: 355 HERLH--VSGMNARHSMFFTEALLVPPIKFRPPAKSGDSVMEHPQTVLLGKVLQSNIALG 412
Query: 4117 NAHVNSAERSKFINRWMDLQQSINVLYDSKTATGPGKKDITS-GICQLLEKKEGIFRQKM 3941
NAH NS++RSK I RWMDLQQ++N+LYDSKT+ G++D T+ GICQLLEKKEGIFRQKM
Sbjct: 413 NAHANSSDRSKIIPRWMDLQQTVNILYDSKTS---GQRDNTATGICQLLEKKEGIFRQKM 469
Query: 3940 MGKRVNFACRSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHP 3761
MGKRVN+ACRSVISPDPYLAVNEIG+PPYFALRLTYPERVTPWN KLR+AIING + HP
Sbjct: 470 MGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEHHP 529
Query: 3760 GATTYVDKVSTVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDI 3581
GAT YVDK++TVKLP ++KMR++ISRKLPSSRG VTQ GK EYEFEGK+VYRHLQDGDI
Sbjct: 530 GATHYVDKLATVKLPPSRKMRMSISRKLPSSRGAVTQPGKNLEYEFEGKVVYRHLQDGDI 589
Query: 3580 VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAE 3401
VLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCS+YNADFDGDE+NVHFPQDEISRAE
Sbjct: 590 VLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAE 649
Query: 3400 AYNIVNANEQYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMP 3221
A+NIVNAN+QY+VPT G +RGLIQDHI+SAVLLT +DTFLTRDEF+QLLY SGV A
Sbjct: 650 AFNIVNANKQYVVPTSGQPIRGLIQDHIISAVLLTKRDTFLTRDEFSQLLYSSGVSATAL 709
Query: 3220 GSHPGNNSRKVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQG 3041
G G +K+S ++SE ++ VLPA+WKP PLWTGKQVITA+LNHITRG P +V+ G
Sbjct: 710 GYFVGKPGQKISTINSEEELEPVLPAIWKPEPLWTGKQVITAVLNHITRGRTPFSVRKAG 769
Query: 3040 KLPKDYFTDSTYKSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGS 2861
K P++YF + + E++LLI KNELV GVIDKAQFG +GLVHTVQELYGS
Sbjct: 770 KTPEEYFGKT------------SGEYELLIHKNELVHGVIDKAQFGGYGLVHTVQELYGS 817
Query: 2860 NSAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLE-GEDVGEEVHCNFVK 2684
N+AG+ LS LSRLFTIFLQ+HGFTCG+DDL+I+ YD ER +KL+ E +GE H FV
Sbjct: 818 NAAGVLLSVLSRLFTIFLQMHGFTCGIDDLLIVHRYDLERMKKLDKNEQIGEFEHWQFVG 877
Query: 2683 FKRGQIGPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQISKKLLTKGLLKPFPK 2504
G P +LQ+EIEK I N +SA LD +M + S+++K L +GL KPFPK
Sbjct: 878 CADGDKDPIKLQVEIEKAIRRNGDSAVTRLDRRMSGAMNKLTSEVNKNLFPEGLCKPFPK 937
Query: 2503 NCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFI 2324
NC+S+MT TGAKG VN QI S LGQQELEGKRVPRMVSGKTLPCF PWD SRAGGFI
Sbjct: 938 NCLSLMTATGAKGGMVNSTQICSLLGQQELEGKRVPRMVSGKTLPCFPPWDPASRAGGFI 997
Query: 2323 TDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDAD 2144
+DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKV YDYTVRDAD
Sbjct: 998 SDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLEGLKVCYDYTVRDAD 1057
Query: 2143 GSIIQFYYGEDGVDVHRTSFLKNFKALADNQETICRKFQNKREFNT-----YIEKLPDGL 1979
GS++QF YGEDG+DVH+TSFL+ F+ALA N + +F N+ + YI+KLP L
Sbjct: 1058 GSVVQFIYGEDGIDVHKTSFLEEFEALAANHRIVQERFNNQLDSEVLFKYDYIKKLPVAL 1117
Query: 1978 EKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQK 1799
E +A+ +I K+ K K L +RK +F++L+ K
Sbjct: 1118 EGKAKDYIDTLSKK-------------------KLKSLNLRKRK-------DFMKLMRSK 1151
Query: 1798 YLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTI 1619
Y+SSLAQ GEPVGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILM AS+ I
Sbjct: 1152 YISSLAQPGEPVGVVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMRASEKI 1211
Query: 1618 KTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESME---VELSINHQQVARIYKLKMN 1448
+TP++TCP + + + D L + ++KV++AD+ ESME V S+ QV+ +YKLK+
Sbjct: 1212 QTPVMTCPLRKGKTEDDAKRLAAKLQKVTVADVIESMEVGVVPFSVKKHQVSTVYKLKLK 1271
Query: 1447 LKATEF------VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTLSSPSETLT 1286
L E ++L+D ATL+ F+ E+EDAI++H++ LS++ GI N S+ S +
Sbjct: 1272 LYPPELYPPYSGITLKDCQATLKFVFVGEMEDAIQSHLLMLSKIRGITNVVHSTQSNSGD 1331
Query: 1285 EADNN---STVRSXXXXXXXXXXXXXERGEDLGSDVQKRKQQSTDEMDYDDGSEAEPDEG 1115
AD + S ++ E +DLG+D QKRK+Q+TDEMDY+D E E
Sbjct: 1332 GADEDGPTSKSQAAEENDDAGDDDDYEAPDDLGADAQKRKRQATDEMDYEDDMENEIVNT 1391
Query: 1114 ELS-SELEKGQTYQDHLEEADNR-----KXXXXXXXXXXEASNMQNDRETKSESKSSRAG 953
E S++E ++ +++A+ EAS + T S+SKSS
Sbjct: 1392 ENGRSDIEASAGFESEIDQAEVEAGNIMDGEIQVFDAEDEASQTPSQHGTVSKSKSSGGK 1451
Query: 952 AKSTAKTNEKSGEEFSDKKPRRAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYI 773
++ A+ + ++ SD RA ++ +GL FEVHF+FT EPH+LLAQIAQKTAK VY+
Sbjct: 1452 DEADARGMTRRTKKDSD----RAFFMVAEGLDFEVHFRFTNEPHILLAQIAQKTAKNVYV 1507
Query: 772 KSSGKISHCKMVKYDADEKTVIWDDDKKPKKSTVKDLQTDNEDLAYWAMKASGVDFKSFW 593
K SG I C +V V D +P+ + +LQT SGVDF +FW
Sbjct: 1508 KRSGNIELCSVV--------VPKKADGEPE---IPELQT------------SGVDFPTFW 1544
Query: 592 EMQDDLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGVKIDYRHLSLIADYMT 413
MQDDLD+ RL SN+I A+L TYGVEAARATII +V QVF YG+ ++ RHLSLIAD+MT
Sbjct: 1545 NMQDDLDIRRLKSNDIHAVLNTYGVEAARATIIEQVNQVFKSYGIAVNIRHLSLIADFMT 1604
Query: 412 HAGGYRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNLETPSSRICLGLPVKM 233
GGYRPM+R G IAE++SPF KMS+ETAS+F++EAA HG DNLE+PS+RICLGLPVKM
Sbjct: 1605 QTGGYRPMSRFG-IAETISPFSKMSYETASRFVIEAAYHGEMDNLESPSARICLGLPVKM 1663
Query: 232 GTGCFDLMQKLEV 194
GTGCFDLMQK+ +
Sbjct: 1664 GTGCFDLMQKINI 1676
>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 1804 bits (4673), Expect = 0.0
Identities = 987/1768 (55%), Positives = 1215/1768 (68%), Gaps = 50/1768 (2%)
Frame = -3
Query: 5347 MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDE 5168
MAQ TEGAT++VEAV+F FMT EEVR HS +K+TN NLLD +++P+ GGLYD +GPL++
Sbjct: 1 MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60
Query: 5167 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNC 4988
CKSCG HCPGHCGHIDLVSP+YNPLLFN LH LL + CF C+HFR+ + EV+ C
Sbjct: 61 RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120
Query: 4987 VTQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQK 4808
V+QL+ I GDI+GAKRL+ +EGS S +H+
Sbjct: 121 VSQLKLIGNGDIVGAKRLDSDSA------------DASSYSDYNEGSQESGSIVHN---- 164
Query: 4807 HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 4628
SE K W S Q EA+ VLN FL KP FGW HM+G+ G Q
Sbjct: 165 -SEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQ 223
Query: 4627 IRSNATRHSRL----GVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKK 4460
+R N R ++ G+ED + +K
Sbjct: 224 MRENVIRGCKMVDTFSDEAGSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARK 283
Query: 4459 SKKKPMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQH 4280
K + E K KN FSGPLLPSEV+ I + LWENE +CS I DI
Sbjct: 284 KKAQ-------VPLEFMKQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF-- 334
Query: 4279 GESGKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNS 4100
GK +SMFFLE+ILVPPIKFR P KGGDSVMEHP T+LL KVLQ+NI+LGNA+ N+
Sbjct: 335 ---GKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNN 391
Query: 4099 AERSKFINR-WMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVN 3923
+ SK + R WMDLQQS+N+L+DSKTA G+ D++SGICQLLEKKEG+FRQKMMGKRVN
Sbjct: 392 LQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGR-DVSSGICQLLEKKEGMFRQKMMGKRVN 450
Query: 3922 FACRSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYV 3743
FACRSVISPDPYLAVNEIG+PPYFALRLTYPERVTPWN VKLR AIING + HPGAT YV
Sbjct: 451 FACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYV 510
Query: 3742 DKVSTVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQ 3563
DK+ST +LP ++K RI+ISRKLPSSRG + Q GK +YEFEGKIV RHLQDGD+VLVNRQ
Sbjct: 511 DKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQ 570
Query: 3562 PTLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVN 3383
PTLHKPSIMAHVVRVLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVN
Sbjct: 571 PTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVN 630
Query: 3382 ANEQYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGN 3203
AN QY+ P+ G+ +R LIQDHIVSAVLLT +DTFL+RDEFNQLLY SGV ++ S G
Sbjct: 631 ANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGK 690
Query: 3202 NSRKVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDY 3023
+KV + SE M ++PA+ KP PLWTGKQVI+++L+HITRG P TV K+P+D+
Sbjct: 691 PGQKVFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDF 750
Query: 3022 FTDSTYK---SEDEEDRDQN----------------AEHKLLIWKNELVRGVIDKAQFGK 2900
F + K S EE++ +N E K+LI++N+LVRGVIDKAQF
Sbjct: 751 FRNRRNKNKQSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFAD 810
Query: 2899 FGLVHTVQELYGSNSAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEG- 2723
+GLVHTVQELYGSN+AGI LS SRLFT+FLQ+HGFTCGVDDL+I+ + D ERK++LE
Sbjct: 811 YGLVHTVQELYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDC 870
Query: 2722 EDVGEEVHCNFVKFKRGQIGPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQ-IS 2546
E E H K ELQLEIE+ I + E+A +LD KM + L + S+ +
Sbjct: 871 EKKVTEAHYELFGVKVN--SETELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVL 928
Query: 2545 KKLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPC 2366
+LL++GL+K +NCIS+MTT+GAKGS VNFQQISS+LGQQELEGKRVPRMVSGKTLPC
Sbjct: 929 TELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPC 988
Query: 2365 FSPWDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 2186
F PWD+ +RAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE
Sbjct: 989 FHPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 1048
Query: 2185 SLKVSYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETICRKFQNK-REFN 2009
LK+SYD+TVRDADGSI+QF YGEDG+DVH+TSF+ F+ALA NQ+ + K ++ E +
Sbjct: 1049 CLKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGEPD 1108
Query: 2008 TYIEKLPDGLEKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQ 1829
+ LPDGL +A FIRE E++K ++ PK
Sbjct: 1109 DSDKILPDGLRSKAEQFIRE------EIKKYQHQKIKPK--------------------- 1141
Query: 1828 NEFLELIEQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQ 1649
+FL L++ K+LSSLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQ
Sbjct: 1142 -DFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQ 1200
Query: 1648 EILMTASDTIKTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVEL---SINHQQ 1478
EILMTAS I+TP++TCP + + K D + L + +KK+++AD+ ESMEV + ++++
Sbjct: 1201 EILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGD 1260
Query: 1477 VARIYKLKMNL-KATEF-----VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNF 1316
+ IYKLKM L K ++ ++++D L+ FLRELEDAI+NH+V LS++SGIK F
Sbjct: 1261 ICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKF 1320
Query: 1315 TLSSPSETLTEADNN-----STVRSXXXXXXXXXXXXXERGEDLGSDVQKRKQQSTDEMD 1151
S E D + S ER EDLG D QK+KQQ+TDEMD
Sbjct: 1321 MPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMD 1380
Query: 1150 YDDGSEAEPDEG----ELSSELEKGQ----TYQDHLEEADNRKXXXXXXXXXXEASNMQN 995
Y+D SE E +EG L SE++ + T Q ++ +DN K + N++N
Sbjct: 1381 YEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGK-----DEISQSSPNLEN 1435
Query: 994 DRETKSESKSSRAGAKSTAKTNEKSGEEFSDKKPRRAIYIAVKGLHFEVHFKFTMEPHLL 815
KS + + + K +K +F K+ RAI+ A++GL FEVHFK EPH+L
Sbjct: 1436 RSNPKSREEKTGSEPK-----RKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHIL 1490
Query: 814 LAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKTVI-WDDDKKPKKSTVKDLQTDNEDLA 638
LAQIA+KTAKKVYI+S GKI C++ D E V + +D K +KS +D E +
Sbjct: 1491 LAQIAEKTAKKVYIQSFGKIDQCRVT--DCSENQVFYYGEDPKKRKS-----PSDKEKIQ 1543
Query: 637 YWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGV 458
A+ +GVDF +FW+M+D +D+ LYSN+I AML TYGVEAAR TIIRE+ VF YG+
Sbjct: 1544 --ALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGI 1601
Query: 457 KIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNL 278
++ RHL+LIAD+MTH+G YRPM+R G IAES+SPF KMSFETASKFIVEAA HG+ DNL
Sbjct: 1602 AVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNL 1661
Query: 277 ETPSSRICLGLPVKMGTGCFDLMQKLEV 194
ETPSSRICLGLPVKMGTG FDLMQK+E+
Sbjct: 1662 ETPSSRICLGLPVKMGTGSFDLMQKVEI 1689
>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 1773 bits (4593), Expect = 0.0
Identities = 973/1766 (55%), Positives = 1205/1766 (68%), Gaps = 48/1766 (2%)
Frame = -3
Query: 5347 MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDE 5168
MAQ TEGAT++VEAV+F FMT EEVR HS +K+TN NLLD +++P+ GGLYD +GPL++
Sbjct: 1 MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60
Query: 5167 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNC 4988
CKSCG HCPGHCGHIDLVSP+YNPLLFN LH LL + CF C+HFR+ + EV+ C
Sbjct: 61 RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120
Query: 4987 VTQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQK 4808
V+QL+ I GDI+GAKRL+ +EGS S +H+
Sbjct: 121 VSQLKLIGNGDIVGAKRLDSDSA------------DASSYSDYNEGSQESGSIVHN---- 164
Query: 4807 HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 4628
SE K W S Q EA+ VLN FL KP FGW HM+G+ G Q
Sbjct: 165 -SEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQ 223
Query: 4627 IRSNATRHSRL----GVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKK 4460
+R N R ++ G+ED + +K
Sbjct: 224 MRENVIRGCKMVDTFSDEAGSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARK 283
Query: 4459 SKKKPMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQH 4280
K + E K KN FSGPLLPSEV+ I + LWENE +CS I DI
Sbjct: 284 KKAQ-------VPLEFMKQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF-- 334
Query: 4279 GESGKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNS 4100
GK +SMFFLE+ILVPPIKFR P KGGDSVMEHP T+LL KVLQ+NI+LGNA+ N+
Sbjct: 335 ---GKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNN 391
Query: 4099 AERSKFINR-WMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVN 3923
+ SK + R WMDLQQS+N+L+DSKTA G+ D++SGICQLLEKKEG+FRQKMMGKRVN
Sbjct: 392 LQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGR-DVSSGICQLLEKKEGMFRQKMMGKRVN 450
Query: 3922 FACRSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYV 3743
FACRSVISPDPYLAVNEIG+PPYFALRLTYPERVTPWN VKLR AIING + HPGAT YV
Sbjct: 451 FACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYV 510
Query: 3742 DKVSTVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQ 3563
DK+ST +LP ++K RI+ISRKLPSSRG + Q GK +YEFEGKIV RHLQDGD+VLVNRQ
Sbjct: 511 DKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQ 570
Query: 3562 PTLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVN 3383
PTLHKPSIMAHVVRVLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVN
Sbjct: 571 PTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVN 630
Query: 3382 ANEQYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGN 3203
AN QY+ P+ G+ +R LIQDHIVSAVLLT +DTFL+RDEFNQLLY SGV ++ S G
Sbjct: 631 ANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGK 690
Query: 3202 NSRKVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDY 3023
+KV + SE M ++PA+ KP PLWTGKQVI+++L+HITRG P TV K+P+D+
Sbjct: 691 PGQKVFVSTSEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDF 750
Query: 3022 FTDSTYK---SEDEEDRDQN----------------AEHKLLIWKNELVRGVIDKAQFGK 2900
F + K S EE++ +N E K+LI++N+LVRGVIDKAQF
Sbjct: 751 FRNRRNKNKQSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFAD 810
Query: 2899 FGLVHTVQELYGSNSAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEG- 2723
+GLVHTVQELYGSN+AGI LS SRLFT+FLQ+HGFTCGVDDL+I+ + D ERK++LE
Sbjct: 811 YGLVHTVQELYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDC 870
Query: 2722 EDVGEEVHCNFVKFK-RGQIGPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQ-I 2549
E E H K + P ELQLEIE+ I + E+A +LD KM + L + S+ +
Sbjct: 871 EKKVTEAHYELFGVKVNSETAPTELQLEIERTIRRDGETALTALDRKMISVLNENSSKGV 930
Query: 2548 SKKLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLP 2369
+LL++GL+K +NCIS+MTT+GAKGS VNFQQISS+LGQQELEGKRVPRMVSGKTLP
Sbjct: 931 LTELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLP 990
Query: 2368 CFSPWDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNL 2189
CF PWD+ +RAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNL
Sbjct: 991 CFHPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNL 1050
Query: 2188 ESLKVSYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETICRKFQNK-REF 2012
E LK+SYD+TVRDADGSI+QF YGEDG+DVH+TSF+ F+ALA NQ+ + K ++ E
Sbjct: 1051 ECLKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGEP 1110
Query: 2011 NTYIEKLPDGLEKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKE 1832
+ + LPDGL +A FIRE E++K ++ PK
Sbjct: 1111 DDSDKILPDGLRSKAEQFIRE------EIKKYQHQKIKPK-------------------- 1144
Query: 1831 QNEFLELIEQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRL 1652
+FL L++ K+LSSLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRL
Sbjct: 1145 --DFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRL 1202
Query: 1651 QEILMTASDTIKTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVEL---SINHQ 1481
QEILMTAS I+TP++TCP + + K D + L + +KK+++AD+ ESMEV + ++++
Sbjct: 1203 QEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNG 1262
Query: 1480 QVARIYKLKMNL-KATEF-----VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKN 1319
+ IYKLKM L K ++ ++++D L+ FLRELEDAI+NH+V LS++SGIK
Sbjct: 1263 DICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKK 1322
Query: 1318 FTLSSPSETLTEADNNSTVRSXXXXXXXXXXXXXERGEDLGSDVQKRKQQSTDEMDYDDG 1139
F S E D ED+ S+ + R+ ++ D+ D DD
Sbjct: 1323 FMPDSQRNASNEMD-----------------------EDV-SEGRSRETKNDDDDDDDDA 1358
Query: 1138 SEAEPDE------GELSSELEKGQ----TYQDHLEEADNRKXXXXXXXXXXEASNMQNDR 989
+ E E L SE++ + T Q ++ +DN K + N++N
Sbjct: 1359 DDEERAEDLGASLAALESEIDMSEDETGTIQINMIGSDNGK-----DEISQSSPNLENRS 1413
Query: 988 ETKSESKSSRAGAKSTAKTNEKSGEEFSDKKPRRAIYIAVKGLHFEVHFKFTMEPHLLLA 809
KS + + + K +K +F K+ RAI+ A++GL FEVHFK EPH+LLA
Sbjct: 1414 NPKSREEKTGSEPK-----RKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLA 1468
Query: 808 QIAQKTAKKVYIKSSGKISHCKMVKYDADEKTVI-WDDDKKPKKSTVKDLQTDNEDLAYW 632
QIA+KTAKKVYI+S GKI C++ D E V + +D K +KS +D E +
Sbjct: 1469 QIAEKTAKKVYIQSFGKIDQCRVT--DCSENQVFYYGEDPKKRKS-----PSDKEKIQ-- 1519
Query: 631 AMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGVKI 452
A+ +GVDF +FW+M+D +D+ LYSN+I AML TYGVEAAR TIIRE+ VF YG+ +
Sbjct: 1520 ALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAV 1579
Query: 451 DYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNLET 272
+ RHL+LIAD+MTH+G YRPM+R G IAES+SPF KMSFETASKFIVEAA HG+ DNLET
Sbjct: 1580 NIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLET 1639
Query: 271 PSSRICLGLPVKMGTGCFDLMQKLEV 194
PSSRICLGLPVKMGTG FDLMQK+E+
Sbjct: 1640 PSSRICLGLPVKMGTGSFDLMQKVEI 1665
>ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
euphratica]
Length = 1699
Score = 1763 bits (4566), Expect = 0.0
Identities = 975/1776 (54%), Positives = 1190/1776 (67%), Gaps = 61/1776 (3%)
Frame = -3
Query: 5338 STEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDENFA 5159
S EGAT +V++V F F+TDEEV HS VK+T+ LLDTL+KP+ GGLYDPAMGPL +
Sbjct: 3 SLEGATVSVDSVAFSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGDE-P 61
Query: 5158 CKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCVTQ 4979
CK+CGQRS +C GHCGHIDL+SPVYNPLLFN LH LL +TCF CFHFR+ +V+ V+Q
Sbjct: 62 CKTCGQRSTNCTGHCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQ 121
Query: 4978 LEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDR-QKHS 4802
LE I +GD++GAKRL+ I+ S+GS S +HS ++
Sbjct: 122 LELIIKGDVVGAKRLDSFSPIEASLPED------------SDGSSESCSTIHSGAPHPNN 169
Query: 4801 EHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQIR 4622
E +KQ W S Q +EA+ +LN FL KPTFGWFH +GLS IR
Sbjct: 170 EQSKQSEWTSLQLSEAMSILNNFLKLESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIR 229
Query: 4621 SNATRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKKPM 4442
SN + + P E+ +TK K
Sbjct: 230 SNLIKQQTIEGPFGGAFEE-------------------------LIDAEDATKSPNNKES 264
Query: 4441 HQARNFSQ------ELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQH 4280
RN + + K+ S LLPSE DI++ LW+NEA +CS + DI
Sbjct: 265 ATNRNLKEHQKLQHQFTSQKDALSSQLLPSEAMDILKLLWKNEAGLCSLMSDIQQ----Q 320
Query: 4279 GESGKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNS 4100
G K HSMFFL ++LVPPIKFRPP KGGDSVMEHP ++LL KVL+ N +L +AH S
Sbjct: 321 GVGKKKAGHSMFFLNTVLVPPIKFRPPTKGGDSVMEHPLSVLLSKVLELNGSLADAH-RS 379
Query: 4099 AERSKFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNF 3920
+ RW++LQQSINVL+DS TA G +KD+ SGICQ+LEKKEG+FRQKMMGKRVN+
Sbjct: 380 NDFPLIARRWLELQQSINVLFDSNTAKG--QKDVISGICQILEKKEGMFRQKMMGKRVNY 437
Query: 3919 ACRSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVD 3740
ACRSVISPDPYL VNEIGVPP FA++LTYPERVTPWN KLRNA+INGP+ HPGAT YVD
Sbjct: 438 ACRSVISPDPYLDVNEIGVPPCFAVKLTYPERVTPWNVAKLRNAVINGPESHPGATHYVD 497
Query: 3739 KVSTVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQP 3560
K+ST KLP N+KMR++++RKL SG+ +YE+EGKIVYRHLQDGDIVLVNRQP
Sbjct: 498 KLSTTKLPPNRKMRVSVARKL---------SGRSFDYEYEGKIVYRHLQDGDIVLVNRQP 548
Query: 3559 TLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNA 3380
TLHKPSIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDE+SRAE YNIVNA
Sbjct: 549 TLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEGYNIVNA 608
Query: 3379 NEQYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNN 3200
N QY+ P+ G+ +R LIQDHI+SAVLLT KDTFLT DE QLLY SGV P S G
Sbjct: 609 NNQYVRPSNGEPIRSLIQDHIISAVLLTKKDTFLTEDEVYQLLYSSGVSNARPTSFSGRA 668
Query: 3199 SRKVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYF 3020
RKV + E ++++ PA+ KP LW+GKQ+ITA+LNHITRG P TV+ GKL D+F
Sbjct: 669 GRKVIFLSYEDEIETLDPAIRKPIYLWSGKQLITAVLNHITRGHPPFTVEKGGKLSYDFF 728
Query: 3019 TDSTY--KSEDEED------------------RDQNAEHKLLIWKNELVRGVIDKAQFGK 2900
KS + E Q + K++I++N LV+GVIDKAQFG+
Sbjct: 729 KSKIKNGKSSNGEKVGVSKPMKEKESGKVNPKEKQLEDDKMIIFRNVLVQGVIDKAQFGE 788
Query: 2899 FGLVHTVQELYGSNSAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEG- 2723
+GLVHTVQEL+G+ +AG LS SRLFT +LQ+HGFTCGVDDL+I D ERK++LE
Sbjct: 789 YGLVHTVQELFGAKAAGTLLSVFSRLFTAYLQMHGFTCGVDDLLITKIKDDERKKQLENC 848
Query: 2722 EDVGEEVHCNFVKFKRG--QIGPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQ- 2552
E GE++H F+ K +I P ELQ IEK I S+ ESA LD +M N+L K S
Sbjct: 849 EKCGEQIHRKFIGIKDENIKIDPLELQSNIEKTIRSDGESALTYLDRQMTNELNSKTSSG 908
Query: 2551 ISKKLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTL 2372
+ +LL++GLLKP KNCIS+MTT+GAKGS VNFQQISS+LGQQELEGKRVPRMVSGKTL
Sbjct: 909 VINELLSEGLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTL 968
Query: 2371 PCFSPWDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN 2192
PCF PWD+ +RAGG+I DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN
Sbjct: 969 PCFHPWDWAARAGGYIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN 1028
Query: 2191 LESLKVSYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETICRKFQNKREF 2012
LE L++ YD+TVRDADGSI+QFYYGEDGVDVH+T F+ F+ALA N+E I K F
Sbjct: 1029 LECLRIGYDHTVRDADGSIVQFYYGEDGVDVHQTGFIAKFEALAANREIIYEKSDELGTF 1088
Query: 2011 NTYIEKLPDGLEKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKE 1832
N YI +LP+ L+++A F+R KE S + T+ R N +E
Sbjct: 1089 NAYISELPEALKEKAEIFLRNIAKEQSSLHDYTK----------DRSSNLVE-------- 1130
Query: 1831 QNEFLELIEQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRL 1652
++F +L++QK+ SLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRL
Sbjct: 1131 -HDFYKLLKQKFFLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRL 1189
Query: 1651 QEILMTASDTIKTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVEL---SINHQ 1481
QEILMTAS IKTPI+TCP + R K D L +KKV++AD+ ESMEV + ++ +
Sbjct: 1190 QEILMTASADIKTPIMTCPLQEGRTKEDAERLSDKLKKVTVADIIESMEVSVMPFAVQND 1249
Query: 1480 QVARIYKLKMNLKATEF------VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKN 1319
+ RIYKLKM L +S+E+ TL F+RELEDAI+NH+V LS++SGIKN
Sbjct: 1250 GICRIYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAIQNHLVLLSKISGIKN 1309
Query: 1318 FTLSSPSETLTEADNN-STVRSXXXXXXXXXXXXXERGEDLGSDVQKRKQQSTDEMDYDD 1142
F S S T EA+ + S S E +DLG DVQKRKQQ TDEMDYDD
Sbjct: 1310 FLKESHSGTPIEAEEDVSGNISHEGENDDDSDDEGEEADDLGLDVQKRKQQVTDEMDYDD 1369
Query: 1141 GSEA--EPDEGELS-----SELEKGQTYQDHLEEADNRKXXXXXXXXXXEASNMQNDRET 983
GSE DEG+LS S E D E N + S++ N +
Sbjct: 1370 GSEGLLNEDEGDLSGSQAPSGSESDTEPADKESEISNTGMVDNDSEYFEKPSHLGNYSKP 1429
Query: 982 KSESKSSRAGAK----STAKTNEKSGEEFSDKKPR---------RAIYIAVKGLHFEVHF 842
KS K+S + ++ S K+ EK ++ KK R R+I++ KGLHFE+H
Sbjct: 1430 KSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIHL 1489
Query: 841 KFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKTVIWDDDKKPKKSTVKDL 662
KFT EPH+LLA+IAQKTAKKV I++ GK+ C++ D E VI+ K PK+ D+
Sbjct: 1490 KFTNEPHILLAEIAQKTAKKVCIQNPGKVQRCQVT--DCKENQVIY-YGKDPKRRI--DI 1544
Query: 661 QTDNEDLAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAARATIIREVK 482
+ E A+ GVDF +FW+MQD LD+ +YSN+I MLK YGVEAAR TIIRE+K
Sbjct: 1545 E-PGEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIK 1603
Query: 481 QVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETASKFIVEAA 302
VF+ YG+ ++ RHLSLIADYMTH G YRPM+R G I+ES+SP KMSFETASKFIVEA
Sbjct: 1604 HVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGGISESISPLSKMSFETASKFIVEAT 1663
Query: 301 SHGMTDNLETPSSRICLGLPVKMGTGCFDLMQKLEV 194
H DNLE PS+R+CLGLPVKMGTG FDLMQKLE+
Sbjct: 1664 LHREVDNLEAPSARVCLGLPVKMGTGSFDLMQKLEI 1699
>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1651
Score = 1754 bits (4544), Expect = 0.0
Identities = 960/1761 (54%), Positives = 1176/1761 (66%), Gaps = 43/1761 (2%)
Frame = -3
Query: 5347 MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDE 5168
M +TEGAT +VEAV F F+TD+E+R S VK+T+P L+D L P+ GLYD A+GP D+
Sbjct: 1 MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60
Query: 5167 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNC 4988
CKSCGQ S HCPGH GHI+LVSPVYNPL+FN+L N+L +TCF C HFR+ EV
Sbjct: 61 KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120
Query: 4987 VTQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELH----S 4820
+QLE I +GDII AKRL S S D +H
Sbjct: 121 TSQLELIMKGDIIRAKRLE------------------SIIPGKSVDSFNPDESIHPGDGD 162
Query: 4819 DRQKHSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGL 4640
+ Q +S W S QF+EA+ VL + L KPTFGWFHM+ L
Sbjct: 163 ESQCYSAEQLGENWTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVL 222
Query: 4639 SGNQIRSNATRHSR---------LGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXX 4487
S ++ R++ R LG VED
Sbjct: 223 SADETRADTIRSVESETTNDDISLGGGDTTDVED-------------------------- 256
Query: 4486 XXXXXSTKKSKKKPMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYIC 4307
+ K+ K+K + +++ N SG LLPS+V+ I+ LWENEA +CSYI
Sbjct: 257 ITSAGTAKRDKRKKEKLSYKLAEQ-----NKLSGSLLPSQVKGILELLWENEARLCSYIN 311
Query: 4306 DIXXXXXQHGESGKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNI 4127
DI GK HSMFFLE+I VPPIKFRPP KGGD+VMEHP T+LL KVLQ NI
Sbjct: 312 DIQDQGF-----GKKAGHSMFFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNI 366
Query: 4126 ALGNAHVNSAERSKFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQ 3947
+LG+AH+N ++ SK ++RWMDLQQS+N+L+D+KTA+G K+D+ +GICQLLEKKEGIFRQ
Sbjct: 367 SLGDAHLNKSDPSKVLSRWMDLQQSVNMLFDNKTASG--KRDVATGICQLLEKKEGIFRQ 424
Query: 3946 KMMGKRVNFACRSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDI 3767
KMMGKRVNFACRSVISPDPYLAVNEIG+PPYFALRL+YPERVTPWN VKLRNAI+NGP+
Sbjct: 425 KMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPES 484
Query: 3766 HPGATTYVDKVSTVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDG 3587
HPGAT Y DKVS VKLP K+ SRKLP+SRGV+ GK +++EFEGK+VYRHL+DG
Sbjct: 485 HPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDG 544
Query: 3586 DIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISR 3407
D+VLVNRQPTLHKPSIMAH+VRVLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISR
Sbjct: 545 DVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISR 604
Query: 3406 AEAYNIVNANEQYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAM 3227
AEAYNIVNAN QY+ PT GD +R LIQDHIVSA LLT KDTFL+ +EFNQLLY SGV
Sbjct: 605 AEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFLSYEEFNQLLYSSGVSMA 664
Query: 3226 MPGSHPGNNSRKVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKN 3047
GS G + +KV + +SE M PA+WKP PLWTGKQVI+ALL +ITRG P T +
Sbjct: 665 GLGSFYGKHGQKVFISNSESEMFLFPPAIWKPEPLWTGKQVISALLYYITRGSPPFTAEK 724
Query: 3046 QGKLPKDYFTDST-----YKSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHT 2882
K+P ++F Y + + +D+ E KLLI+KN+LVRGV+DKAQFG +G++HT
Sbjct: 725 NAKIPSNFFKTQIRKGKRYTEDTSKKKDKPDEDKLLIYKNDLVRGVVDKAQFGDYGMIHT 784
Query: 2881 VQELYGSNSAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEG-EDVGEE 2705
VQELYGSN AG LSALSRLFT FLQ+HGFTCGVDDL++ D ER +L+ E +G+
Sbjct: 785 VQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVDDLMLTEGKDVERMNQLKSCEIIGDS 844
Query: 2704 VHCNFVKFKRGQ-IGPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQ-ISKKLLT 2531
VH F+ K I P LQL IEK I SN E+A +LD KM + L + S I KKLL+
Sbjct: 845 VHREFIGVKNSDNIDPVTLQLNIEKKIRSNGEAAL-TLDRKMTSNLNSRTSSGILKKLLS 903
Query: 2530 KGLLKPFPKNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWD 2351
+G+LKP KNCIS+MTT+GAKGS VNFQQISS+LGQQELEGKRVPRMVSGKTLPCF PWD
Sbjct: 904 EGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWD 963
Query: 2350 FTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVS 2171
+ RAGGFI DRFLT L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKV
Sbjct: 964 CSPRAGGFIIDRFLTALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVC 1023
Query: 2170 YDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETI----CRKFQNKREFNTY 2003
YD+TVRDADGSIIQF+YGEDGVDVH+TSF+ F AL+ N+E + CR+ + Y
Sbjct: 1024 YDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSNYCRQLDRS---SPY 1080
Query: 2002 IEKLPDGLEKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNE 1823
I KLP+ LE +A F ++ R EQ +
Sbjct: 1081 INKLPEALEGKAEKFSKQ--------------------------------RNLGSMEQAD 1108
Query: 1822 FLELIEQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEI 1643
FL L+E KY+S LAQ GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEI
Sbjct: 1109 FLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEI 1168
Query: 1642 LMTASDTIKTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVEL---SINHQQVA 1472
LM A+ IKTP +TCP + D + L +KK+++AD+ +SM+V + ++ QV
Sbjct: 1169 LMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVC 1228
Query: 1471 RIYKLKMNL-KATEF-----VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTL 1310
IYKL M L K+ ++ ++L+D TLR F+RELEDAI+NH+ LS++SGIK F
Sbjct: 1229 SIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKFKT 1288
Query: 1309 SSPSETLTEADNNSTVRSXXXXXXXXXXXXXERG---------EDLGSDVQKRKQQSTDE 1157
S +++ + S E G EDLGSD QKRK Q TDE
Sbjct: 1289 DPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDE 1348
Query: 1156 MDYDDGSEAEPDEGELSSELEKGQTYQDHLEEADNRKXXXXXXXXXXEASNMQNDRETKS 977
+DY+DG E E +GELS E+E + D ++ +N ++ N +
Sbjct: 1349 VDYEDGPEEETHDGELSEEIEGDEDGSD-VDANENYNN----------VTDANNSEGLEK 1397
Query: 976 ESKSSRAGAKSTAKTNEKSGEEFSDKKPRRAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQ 797
SKS K K +K E + KK RAI++ KG HFE+HF+FT EPH+LL QIAQ
Sbjct: 1398 PSKSKTIDEKQNLKREKKKSEP-TTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQ 1456
Query: 796 KTAKKVYIKSSGKISHCKMVKYDADEKTVIWDDDKKPKKSTVKDLQTDNEDLAYWAMKAS 617
+TAKKV I++ GK+ CK + E VI+ K + ++ ++ E + A++ S
Sbjct: 1457 RTAKKVCIQNFGKVGECKAIT--CKESGVIYYG--KDGRKRIEISASEKEQIP--ALQTS 1510
Query: 616 GVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGVKIDYRHL 437
GV FK+FWE++DDLD+ +YSNN+ AML YGVEAAR TIIREV+ VF YG+ ++ RHL
Sbjct: 1511 GVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHL 1570
Query: 436 SLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNLETPSSRI 257
+LIAD+MTH G YRPM R GSIA+S SPFIKM FETA FIVEAA HG DNLETPS+RI
Sbjct: 1571 TLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARI 1630
Query: 256 CLGLPVKMGTGCFDLMQKLEV 194
CLGLPVKMGTGC DL+QKLE+
Sbjct: 1631 CLGLPVKMGTGCHDLIQKLEI 1651
>ref|XP_009345035.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
[Pyrus x bretschneideri]
Length = 1684
Score = 1739 bits (4503), Expect = 0.0
Identities = 949/1783 (53%), Positives = 1186/1783 (66%), Gaps = 68/1783 (3%)
Frame = -3
Query: 5338 STEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDEN-- 5165
S+E T + EA+KF F+TDEEVR HS +++T+P+LL L P+ GGLYD A+GP+D+
Sbjct: 3 SSEVPTASTEAIKFAFLTDEEVRQHSFLRVTDPSLLTQLGNPVAGGLYDKALGPIDDKPG 62
Query: 5164 FACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCV 4985
+C +CG++S +CPGHCGHIDL PVYNPLLFN L LL +TCF C+HFR+ + V+ V
Sbjct: 63 ESCGTCGEKSRNCPGHCGHIDLALPVYNPLLFNTLFKLLQRTCFFCYHFRTDQTHVEKAV 122
Query: 4984 TQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQKH 4805
+QL+ I EGD++GAK L+ SE ++ + HSD+
Sbjct: 123 SQLKLIMEGDVVGAKMLDSDSP--------------------SEYLDCNEGDSHSDK--- 159
Query: 4804 SEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQI 4625
H KQ W S QFTE + V ++ L KPTFG F MSG
Sbjct: 160 --HAKQQGWTSLQFTELMSVFDKALPKQGKDCNNCKAKNPKIIKPTFGCFQMSG--AENA 215
Query: 4624 RSNATRHSRLGVP---QNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSK 4454
R N R L P Q+ G E++
Sbjct: 216 RENVIRGCNLVGPLTGQDEGDENENVD-----------------------------NNDM 246
Query: 4453 KKPMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGE 4274
+K + E SG LLP +V+DI++ LW+NEA CS+I DI
Sbjct: 247 EKHNGEGSKVPSEFLNQTTSLSGDLLPKQVQDIIKLLWDNEAEFCSFIGDIQCQGI---- 302
Query: 4273 SGKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAE 4094
G+ HSMFFLE++LVPPIKFRPP+KGGDSVMEHP T+LL KV+Q+N +L + V ++
Sbjct: 303 -GRKAGHSMFFLETVLVPPIKFRPPSKGGDSVMEHPQTVLLSKVVQANNSLQESVVTKSD 361
Query: 4093 RSKFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFAC 3914
SK I +W DLQ+ INV+Y+SKTATG G+KD GICQLLEKKEG+FRQKMMGKRVN+AC
Sbjct: 362 PSKTIRQWRDLQEYINVMYNSKTATGKGQKDADPGICQLLEKKEGLFRQKMMGKRVNYAC 421
Query: 3913 RSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKV 3734
RSVISPDPYLAVNEIG+PPYFA RLTYPERVTPWN KLRNAI+NGP+IHPGAT YVDK
Sbjct: 422 RSVISPDPYLAVNEIGIPPYFATRLTYPERVTPWNVDKLRNAIVNGPEIHPGATQYVDKS 481
Query: 3733 STVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTL 3554
S L N++ RI+ +RKLPSS+G+ TQ GK ++ +E K+V+RHL+DGDIVLVNRQPTL
Sbjct: 482 SVKMLRQNRRERISTARKLPSSKGLATQHGKGSDNSYENKVVFRHLRDGDIVLVNRQPTL 541
Query: 3553 HKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANE 3374
HKPSIMAHVVRVLKGEKT+RMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN
Sbjct: 542 HKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANN 601
Query: 3373 QYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSR 3194
QY+ PT GD +R LIQDH++SAVLLT KDTFL +EFNQLLY S V A + G +
Sbjct: 602 QYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWEEFNQLLYSSCVSARRSDALSGKPDQ 661
Query: 3193 KVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYF-- 3020
KV + + EG MQ +LPA+WKP LWTGKQV+TALLNHITRG P TV+ K+P+ +F
Sbjct: 662 KVFMCNIEGTMQPLLPAIWKPERLWTGKQVVTALLNHITRGSPPVTVEKDAKIPRGFFNC 721
Query: 3019 ----------------------------TDSTYKSEDEEDRDQNA------EHKLLIWKN 2942
+ + K + + D D++ E+ LLI+KN
Sbjct: 722 NLEEEKFDEEELQKKKKRSKGKQADECGSQNEKKPDKKVDNDKSKDTGVVDENSLLIYKN 781
Query: 2941 ELVRGVIDKAQFGKFGLVHTVQELYGSNSAGIFLSALSRLFTIFLQIHGFTCGVDDLIIL 2762
LVRGVIDKAQFG +GLVHTVQELYGS++AGI LS LSRLFT++LQ+HGFTCGVDDL+++
Sbjct: 782 NLVRGVIDKAQFGDYGLVHTVQELYGSDAAGILLSVLSRLFTVYLQMHGFTCGVDDLLVM 841
Query: 2761 PNYDKERKEKLEG-EDVGEEVHCNFVKF---KRGQIGPEELQLEIEKVICSNRESATASL 2594
P+ D + KE+LE E++GE+V +F++ KR + LQL IEK I SN ESA A+L
Sbjct: 842 PSKDTKMKEQLESCEEIGEKVFRDFIEVEDDKRKDL--VALQLNIEKFIRSNGESALAAL 899
Query: 2593 DMKMKNKLTDK--GSQISKKLLTKGLLKPFPKNCISVMTTTGAKGSTVNFQQISSYLGQQ 2420
D +M ++L +K S + K+LL KGL KP KNCI +MTT+GAKGS N QQI+SYLGQQ
Sbjct: 900 DRRMISQLNNKTSNSDVFKQLLLKGLSKPSVKNCIYLMTTSGAKGSVANLQQITSYLGQQ 959
Query: 2419 ELEGKRVPRMVSGKTLPCFSPWDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTA 2240
ELEGKRVP+MVSGKTLPCF PWD++SR+GGFI DRFLTGLRPQEYYFHCMAGREGLVDTA
Sbjct: 960 ELEGKRVPQMVSGKTLPCFHPWDWSSRSGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTA 1019
Query: 2239 VKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALA 2060
VKTSRSGYLQRCLIKNLE LKV YD+TVRDADGSI+QFYYGEDGVDVH TSFL+ F +LA
Sbjct: 1020 VKTSRSGYLQRCLIKNLECLKVCYDHTVRDADGSIVQFYYGEDGVDVHLTSFLQKFDSLA 1079
Query: 2059 DNQETICRKFQNKRE-FNTYIEKLPDGLEKEARHFIREARKETSEVQKPTEKEHLPKGRK 1883
N+E KF + + + YI +LP L+ +A F+ +
Sbjct: 1080 ANKEMFQNKFHRQIDKSDPYIAELPSALKYKAEKFVLDL--------------------- 1118
Query: 1882 AKRKENQLEERKATEKEQNEFLELIEQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTF 1703
L+E Q +FL+L+E KYLSSLAQ GEPVGV+AAQSVGEPSTQMTLNTF
Sbjct: 1119 ------SLKEESHNLFSQVDFLKLMEHKYLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1172
Query: 1702 HLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFMQYRYKPDVMYLVSNVKKVSIAD 1523
HLAGRGEMNVTLGIPRLQEILMTA++ IKTP++TCP + R K + +L + +KK+++AD
Sbjct: 1173 HLAGRGEMNVTLGIPRLQEILMTAANEIKTPVMTCPLRKGRSKEEAQHLANKLKKITVAD 1232
Query: 1522 LAESMEVELS---INHQQVARIYKLKMNLKATEFVS------LEDLHATLRSTFLRELED 1370
+ ESMEV L + + RIYKL+M L E + ED L F+R LED
Sbjct: 1233 IIESMEVTLLPFVLQGLETCRIYKLQMKLHIPEHLQNIVQDISEDWEEILEVMFVRALED 1292
Query: 1369 AIENHVVFLSRVSGIKNFTLSSPSETLTEADNNSTVRSXXXXXXXXXXXXXERGE---DL 1199
AI++HV+ LS++SGIKN T +P + E D N + + GE D
Sbjct: 1293 AIQSHVLLLSKISGIKNVT-DAPQKASNETDENISKSGHQHQEEDDDNDGADDGEGAEDF 1351
Query: 1198 GSDVQKRKQQSTDEMDYDDGSEAEPDEGELSSELEKGQTYQDHLEEADNRKXXXXXXXXX 1019
G D QKRK Q+ DEMDY+DG E E +G+L+ ++ + D+ EE D
Sbjct: 1352 GMDAQKRKLQAFDEMDYEDGCEDEVRDGDLTDG-DEVENDADNDEENDVETGKDGAIEVV 1410
Query: 1018 XEASNMQ--------NDRETKSESKSSRAGAKSTAKTNEKSGEEFSDKKPRRAIYIAVKG 863
M N + KS+ K +++GA K K + K R+I+++ KG
Sbjct: 1411 DATDEMPTSPLEEAGNLPKPKSKEKKNKSGATIKKK---KIRAQLVRKDTDRSIFVSAKG 1467
Query: 862 LHFEVHFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKTVIWDDDKKPK 683
HFE+HFKFT EPH+LLAQIAQ+TA+KV ++ SG + CK + D + + +++ D + K
Sbjct: 1468 FHFEIHFKFTDEPHILLAQIAQQTAQKVSMQRSGSVDDCKQITCD-ENQVLLYGKDPENK 1526
Query: 682 KSTVKDLQTDNEDLAYWAMKASGVDFKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAARA 503
+S + E A++ +GVDF++FW++QD LD+ LYSNNI AML TYGVEAAR
Sbjct: 1527 QS-----YSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYLYSNNIHAMLNTYGVEAARE 1581
Query: 502 TIIREVKQVFDIYGVKIDYRHLSLIADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETAS 323
TIIRE+ VF YG+ ++ RHL+LIADYMTH+GGYRPM R G IAES+SPF KMSFETAS
Sbjct: 1582 TIIREIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRFGGIAESISPFNKMSFETAS 1641
Query: 322 KFIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQKLEV 194
KFIVEAA HG TD+LETPSSRICLGLPVK+GTGCFDLMQK+EV
Sbjct: 1642 KFIVEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKIEV 1684
>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
gi|561018822|gb|ESW17626.1| hypothetical protein
PHAVU_007G255400g [Phaseolus vulgaris]
Length = 1637
Score = 1738 bits (4500), Expect = 0.0
Identities = 953/1758 (54%), Positives = 1172/1758 (66%), Gaps = 40/1758 (2%)
Frame = -3
Query: 5347 MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDE 5168
M TEG T +V+AV F F+T +E+ S VK+TNP LL+ L P++GGLYDPA+GPLD+
Sbjct: 1 MVLFTEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDD 60
Query: 5167 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNC 4988
CKSCGQ S HCPGH GHI+LVSPVYNPL+FN+L ++L +TCF C HF +SR EV+
Sbjct: 61 KSLCKSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMR 120
Query: 4987 VTQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQK 4808
+Q E I +GDII AK L+ S ISD HS
Sbjct: 121 TSQFELIMKGDIIRAKSLD---------------------------SIISDESNHSGDGD 153
Query: 4807 HSEHNKQ--GCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSG 4634
S+ +Q W S QF+EA+ VL +FL KPTFGWFHM+ LS
Sbjct: 154 ESQGVEQLGENWSSLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSD 213
Query: 4633 NQIRSNATR---------HSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXX 4481
++ R+N R LG + ED
Sbjct: 214 DEARANTMRALESETINDDMSLGGGETTEEED--------------------------IT 247
Query: 4480 XXXSTKKSKKKPMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDI 4301
+ K+ K+K + + + N SG LLPS+V+ I+ LWENEA +CSYI DI
Sbjct: 248 STGTAKRDKRKKGKLSSKLAAQ-----NKLSGSLLPSQVKGILELLWENEARLCSYISDI 302
Query: 4300 XXXXXQHGESGKVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIAL 4121
GK HSMFFLE+I VPPIKFRPP KGGD VMEHP T+LL KVLQ NI+L
Sbjct: 303 QDQGF-----GKKAGHSMFFLENIFVPPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNISL 357
Query: 4120 GNAHVNSAERSKFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKM 3941
G+AH+N + SK ++RWMDLQQS+N+L+D+KT+ G+ ++ +GICQLLEKKEGIFRQKM
Sbjct: 358 GDAHINKLDPSKVLSRWMDLQQSVNLLFDNKTS---GQGEVAAGICQLLEKKEGIFRQKM 414
Query: 3940 MGKRVNFACRSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHP 3761
MGKRVNFACRSVISPDPYLAVNEIG+PPYFALRL+YPERVTPWN LRNAI+NGP HP
Sbjct: 415 MGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPWNVTMLRNAILNGPQSHP 474
Query: 3760 GATTYVDKVSTVKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDI 3581
GAT Y D+ +TVKLP N K+ ISRKLPSSRGV+ GK ++ EFEGKIVYRHL+DGD+
Sbjct: 475 GATHYTDQQATVKLPPNGKLLSFISRKLPSSRGVILDHGKISDQEFEGKIVYRHLKDGDV 534
Query: 3580 VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAE 3401
VLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAE
Sbjct: 535 VLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAE 594
Query: 3400 AYNIVNANEQYIVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMP 3221
AYNIVNAN QY+ PT GD +R LIQDHIVSA LLT KDTF+T + F QLLY SGV
Sbjct: 595 AYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFITYEVFIQLLYSSGVSMTGL 654
Query: 3220 GSHPGNNSRKVSLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQG 3041
GS G + +KV + +SE M PA+WKP PLWTGKQVI+ALL +ITR P TV+
Sbjct: 655 GSFSGKHGQKVFMTNSEFEMFLFPPAIWKPEPLWTGKQVISALLYYITRDSPPFTVEKNA 714
Query: 3040 KLPKDYF-TDSTYKSEDEEDRDQNA-----EHKLLIWKNELVRGVIDKAQFGKFGLVHTV 2879
K+P ++F T D+ +N E KLLI+KN+LVRGV+DKAQFG +G++HTV
Sbjct: 715 KIPSNFFKTQVRDGKRHTRDKSRNKVEPDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTV 774
Query: 2878 QELYGSNSAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEG-EDVGEEV 2702
QELYGS AG LSALSRLFT FLQ+HGFTCGVDDL+I D ER ++L E++G+ V
Sbjct: 775 QELYGSKVAGNLLSALSRLFTTFLQMHGFTCGVDDLMITEEKDVERMDQLRSCEEIGDIV 834
Query: 2701 HCNFVKFKRGQ-IGPEELQLEIEKVICSNRESATASLDMKMKNKLTDK-GSQISKKLLTK 2528
H F+ I P LQL IEK I SN E+A LD KM + L + S I K LL+
Sbjct: 835 HREFIGVMNSDIIDPITLQLNIEKKIRSNGEAALTYLDRKMTSNLNSRTSSGILKDLLSD 894
Query: 2527 GLLKPFPKNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDF 2348
G+LKP KNCIS+MTT+GAKGS VNFQQISS+LGQQELEGKRVPRMVSGKTLPCF+PWD
Sbjct: 895 GILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDC 954
Query: 2347 TSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSY 2168
+ RAGGFI DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKV Y
Sbjct: 955 SPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCY 1014
Query: 2167 DYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETI----CRKFQNKREFNTYI 2000
D+TVRDADGSIIQF+YGEDGVDVH TSF+ F+AL+ N+E + CR+ + YI
Sbjct: 1015 DHTVRDADGSIIQFHYGEDGVDVHHTSFINKFEALSTNKELVYGNCCRQLDRS---SPYI 1071
Query: 1999 EKLPDGLEKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEF 1820
KLPD L+++A +F R++ L++R ++ EF
Sbjct: 1072 NKLPDALKEKAENFFRDS----------------------------LKQRNLGSLKRAEF 1103
Query: 1819 LELIEQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL 1640
L+L+E KY+S LAQ GE VGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEI+
Sbjct: 1104 LKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEIV 1163
Query: 1639 MTASDTIKTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVE---LSINHQQVAR 1469
M A+ IKTP +TCP + + + L +KK+++AD+ +SM+V +S+ QV
Sbjct: 1164 MAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPVSVLGGQVCS 1223
Query: 1468 IYKLKMNL-KATEF-----VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTLS 1307
IYKL M L K ++ ++LED TLR +F+RELEDAIENH+ LS++SGIK F
Sbjct: 1224 IYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKISGIKKFKTD 1283
Query: 1306 SPSETLTEAD-------NNSTVRSXXXXXXXXXXXXXERGEDLGSDVQKRKQQSTDEMDY 1148
S + + D + + +S E EDLGSD QKRK+Q TDE+DY
Sbjct: 1284 PQSHSNSSEDAHGNGSESETKGKSNDDDDDDDVVEDTEGYEDLGSDAQKRKRQGTDEVDY 1343
Query: 1147 DDGSEAEPDEGELSSELEKGQTYQDHLEEADNRKXXXXXXXXXXEASNMQNDRETKSESK 968
+DG E E +G LS E+E + D D +D E E
Sbjct: 1344 EDGPEEETHDGVLSEEIENDEDNVDDNMTLD------------------ASDSEGLDELS 1385
Query: 967 SSRAGAKSTAKTNEKSGEEFSDKKPRRAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQKTA 788
S++ + + EK + +K RA+++ KG+HF++HFKFT EP +LLA+IA ++A
Sbjct: 1386 ESKSIFEKDSLKREKKKSRPTTRKYDRAVFVKAKGMHFQIHFKFTGEPDILLAEIALRSA 1445
Query: 787 KKVYIKSSGKISHCKMVKYDADEKTVIWDDDKKPKKSTVKDLQTDNEDLAYWAMKASGVD 608
KKV I++SG++ CK V E V++ + K+ + + A++ SGV
Sbjct: 1446 KKVCIQNSGRVGECKAV--TCKESGVMYYGEDSRKRDDIPASVKEKIP----ALQTSGVH 1499
Query: 607 FKSFWEMQDDLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGVKIDYRHLSLI 428
FK+FWE+QDDLD+ +YSNN+ AML YGVEAAR TIIREV+ VF YG+ ++ RHL+LI
Sbjct: 1500 FKTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLI 1559
Query: 427 ADYMTHAGGYRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNLETPSSRICLG 248
AD+MTH+GGYRPM R+GSIA+ SPFIKM FETASKFIVEAA HG DNLETPSSRICLG
Sbjct: 1560 ADFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLG 1619
Query: 247 LPVKMGTGCFDLMQKLEV 194
LPVKMGTGC DL+QKLE+
Sbjct: 1620 LPVKMGTGCHDLIQKLEI 1637
>ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Tarenaya
hassleriana]
Length = 1671
Score = 1725 bits (4467), Expect = 0.0
Identities = 940/1752 (53%), Positives = 1176/1752 (67%), Gaps = 35/1752 (1%)
Frame = -3
Query: 5344 AQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDEN 5165
+QSTEGAT+ VEAVKF FMTDEEVR HS +K+T+P LLD +E+P+ GGLYDP +GPLD+
Sbjct: 4 SQSTEGATQVVEAVKFSFMTDEEVRKHSFLKVTSPILLDNVERPVPGGLYDPILGPLDDR 63
Query: 5164 FACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNCV 4985
CKSCG CPGHCGHI+LVSPVY+PLLF+ LH+LL TCF C HFR EV+ V
Sbjct: 64 TPCKSCGLLRLSCPGHCGHIELVSPVYHPLLFHFLHSLLQMTCFFCRHFRIRTQEVERVV 123
Query: 4984 TQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQKH 4805
+QL I +GD++ A+ LN K S+ S+ +++ S +
Sbjct: 124 SQLNLIIKGDVVEARLLNSDSKFARWSDSESGRESTHSEH--SDMSYEFGLDIDSSEKCR 181
Query: 4804 SEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQI 4625
+ W S QF+EA VLN FL KPTFGWFH +G++G+ I
Sbjct: 182 DPGTPKQRWTSLQFSEATAVLNAFLKLKTEKCKRCKAKNPKVRKPTFGWFHRAGMTGSAI 241
Query: 4624 RSNATRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKKP 4445
+N + ++ P + VED
Sbjct: 242 GANIIQGLKVRKPSST-VEDLDNDENDGIDAV--------------------------SE 274
Query: 4444 MHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGESGK 4265
+ E K KN+ + LLP+EV++I++ LW+NE CS+I D+ K
Sbjct: 275 AEDSAKVVNEFVKHKNFSTSHLLPTEVKEILKDLWQNEFEFCSFIGDLQQC------GSK 328
Query: 4264 VTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAERSK 4085
H+MFFLESILVPPIKFR P KGG SVMEHP T+ L VL+SNI+LGNA+ N E+SK
Sbjct: 329 KVDHNMFFLESILVPPIKFRAPTKGGASVMEHPQTVALTTVLESNISLGNAYFNKLEKSK 388
Query: 4084 FINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRSV 3905
I RWMDLQQSINVL+DSKTAT +++ SGICQLLEKKEG+FRQKMMGKRVN ACRSV
Sbjct: 389 KIRRWMDLQQSINVLFDSKTATARSQRE-ASGICQLLEKKEGLFRQKMMGKRVNHACRSV 447
Query: 3904 ISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVSTV 3725
ISPDPY+AVNEIG+PPYFAL+LTYPERVTPWN KLR AIINGPDIHPGAT Y D++STV
Sbjct: 448 ISPDPYIAVNEIGIPPYFALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDRLSTV 507
Query: 3724 KLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTLHKP 3545
KLP +K RIA++RKL SSRG + K + FEGKIVYRH+QDGD VLVNRQPTLHKP
Sbjct: 508 KLPPTRKARIALARKLLSSRGTHMEPEKACDINFEGKIVYRHMQDGDAVLVNRQPTLHKP 567
Query: 3544 SIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYI 3365
SIMAH VRVLKGEKTLR+HYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QY+
Sbjct: 568 SIMAHKVRVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYV 627
Query: 3364 VPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSRKVS 3185
P+ GD +R LIQDH+VSAVLLT +DTFL +D+F+QLL+ SGV M+ S G +KV
Sbjct: 628 RPSNGDPLRALIQDHVVSAVLLTKRDTFLDKDQFDQLLFSSGVSDMVLSSFSGKPGKKVI 687
Query: 3184 LVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYFT---- 3017
+ S+ + +V PA+ KP PLWTGKQVITA+LNHIT+G P TV+ KLP D+F
Sbjct: 688 VSASDAELLAVEPAILKPVPLWTGKQVITAVLNHITKGQPPFTVEKATKLPLDFFKIRSR 747
Query: 3016 --------------DSTYKSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTV 2879
S DE + + E KLLI KN+ VRGVIDKAQF +GLVH V
Sbjct: 748 EANSKSKENNVRKHSSKKNDNDESWKRELDEDKLLINKNDFVRGVIDKAQFADYGLVHIV 807
Query: 2878 QELYGSNSAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKL-EGEDVGEEV 2702
QELYGSN+AG LS LSRLFT++LQ+HGFTCGVDDLII + D +R ++L E E VGE V
Sbjct: 808 QELYGSNAAGNLLSVLSRLFTVYLQMHGFTCGVDDLIINKDMDDKRMKQLEESELVGERV 867
Query: 2701 HCNFVKFKRG-QIGPEELQLEIEKVICSNRESATASLDMKMKNKL---TDKGSQISKKLL 2534
+ QI P++L+ +E++ICS+ E+A SLD + N+L T KG + LL
Sbjct: 868 LRKAIGIGNDVQIDPKDLKSRVERIICSDGEAALLSLDRSIVNELNQCTSKG--VMNDLL 925
Query: 2533 TKGLLKPFPKNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPW 2354
+ GLLK KNCIS+MT +GAKGS VNFQQISS+LGQQ+LEGKRVPRMVSGKTLPCF PW
Sbjct: 926 SDGLLKSTGKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPW 985
Query: 2353 DFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKV 2174
D++ RAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLESLKV
Sbjct: 986 DWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKV 1045
Query: 2173 SYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETICRKFQNK--REFNTYI 2000
+YDYTVRD+DGSIIQF YGEDGVDVHRTSF+ FK L N++ I ++ E N YI
Sbjct: 1046 NYDYTVRDSDGSIIQFQYGEDGVDVHRTSFIDKFKELTANRDMILQRCSEDMLSESNCYI 1105
Query: 1999 EKLPDGLEKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEF 1820
LP L+K+A F+ E LP L+ER A++ + E
Sbjct: 1106 TDLPVTLKKQAEKFV----------------EALP-----------LKERIASKLVKEEL 1138
Query: 1819 LELIEQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL 1640
L+L++ KY +SLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL
Sbjct: 1139 LKLVKPKYFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL 1198
Query: 1639 MTASDTIKTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVEL---SINHQQVAR 1469
MTAS IKTPI++CP ++ + K D + ++K+++AD+ E MEV + +I +++
Sbjct: 1199 MTASADIKTPIMSCPLLKGKTKDDANDIADKLRKITVADIIEGMEVSVVPFTILEKELCS 1258
Query: 1468 IYKLKMNLKATEF------VSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTLS 1307
I+KLKM L E ++ +D TL FLR LEDAI+NH+V LS++SGIKNF
Sbjct: 1259 IHKLKMKLYKPEHYPKNTGITAKDWEETLTVVFLRALEDAIQNHIVLLSKMSGIKNFVEE 1318
Query: 1306 SPSETLT-EADNNSTVRSXXXXXXXXXXXXXERGEDLGSDVQKRKQQSTDEMDYDDGSEA 1130
+PS+ E D + +V + +DLGSD QKRK+Q+TDEMDY++ S+
Sbjct: 1319 TPSKAGNGEDDGDGSVAQKQVREDEDEDAEGQDIDDLGSDAQKRKKQATDEMDYEESSDE 1378
Query: 1129 EPDEGELSSELEKGQTYQDHLEEADNRKXXXXXXXXXXEASNMQNDRETKSESKSSRAGA 950
E +E S +E E DN + +D E + + A
Sbjct: 1379 EKNEPSSVSGIED--------PEVDNEDEDMEISKEDL----VGDDGEEPKPEEGKKTKA 1426
Query: 949 KSTAKTNEKSGEEFSDKKPRRAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYIK 770
+ T K +K + F K+ R +++ KG+ FEVHFKF EPH+LLAQIAQKTA+KVYI+
Sbjct: 1427 EKTEK-KKKKRKAFEVKETDRHVFVKAKGMEFEVHFKFKKEPHILLAQIAQKTAQKVYIQ 1485
Query: 769 SSGKISHCKMVKYDADEKTVIWDDDKKPKKSTVKDLQTDNEDLAYWAMKASGVDFKSFWE 590
+ G+I C + D + + + ++ K +K D E A A+ A+G+DF +FWE
Sbjct: 1486 NCGEIQRCTVTDC-GDAQVIYYGENPKERKDVSND-----EKKAKPALHAAGIDFTTFWE 1539
Query: 589 MQDDLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGVKIDYRHLSLIADYMTH 410
+QD++D+ LYSN+I AML TYGVEAAR TIIRE+ VF YG+ + RHL+LIADYMT+
Sbjct: 1540 LQDEIDVRYLYSNSIHAMLNTYGVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTY 1599
Query: 409 AGGYRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNLETPSSRICLGLPVKMG 230
+GGYRPM+R G IAES SPF +MSFETA++FIV+AA++G DNLETPSSRICLGLPV+ G
Sbjct: 1600 SGGYRPMSRMGGIAESTSPFCRMSFETATRFIVQAATYGEVDNLETPSSRICLGLPVQSG 1659
Query: 229 TGCFDLMQKLEV 194
TG FD++Q+L++
Sbjct: 1660 TGSFDVLQRLQL 1671
>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1650
Score = 1723 bits (4463), Expect = 0.0
Identities = 939/1748 (53%), Positives = 1167/1748 (66%), Gaps = 31/1748 (1%)
Frame = -3
Query: 5347 MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDE 5168
MA +TEGAT +V+AV F F+TDEE+ S VK+TNP LLDTL P+ GGLYDPA+GP E
Sbjct: 1 MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60
Query: 5167 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNC 4988
C+SCGQ SYHCPGH GHI+LVSPVYNPL+F+ML N+L +TCF C HF++SR EV+
Sbjct: 61 KSPCQSCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELR 120
Query: 4987 VTQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQK 4808
QLE I +G+I AK L+ E + +SD +D Q
Sbjct: 121 ANQLELIMKGNIAKAKNLDA--------------------INLDESADLSD---GNDSQC 157
Query: 4807 HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 4628
S+ W S QF+EA+ VL +FL KPTFGWFH+ LS Q
Sbjct: 158 SSDEQLGENWTSLQFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQ 217
Query: 4627 IRSNATRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKK 4448
R+N + + +D + K+ K
Sbjct: 218 ARANVISGIDASLASEIIHDDISLGNGDTTDVED---------ITSGDTANSNAKRQNKL 268
Query: 4447 PMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGESG 4268
H N SG LLPS+V+ I+ LWENEA +C YI DI G
Sbjct: 269 ARH-------------NKLSGSLLPSQVQGILELLWENEARLCLYISDIQGQGF-----G 310
Query: 4267 KVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAERS 4088
K HSMFFL++I VPPIKFRPP KG D V EH T+LL +VL+SNI+LG AH+N ++ S
Sbjct: 311 KKAGHSMFFLDNIYVPPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDAS 370
Query: 4087 KFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRS 3908
+ RWMDLQ+S+N+L+D+KTA+G +KD+ +GICQLLEKKEGIFRQKMMGKRVN+ACRS
Sbjct: 371 VVLRRWMDLQRSVNLLFDNKTASG--QKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRS 428
Query: 3907 VISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVST 3728
VISPDPYLAVNEIG+PPYFALRLTYPERVTPWN V+LRNAI+NGP+ HPGAT Y DK ST
Sbjct: 429 VISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTST 488
Query: 3727 VKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTLHK 3548
+KLP +++ R SRKL SSRGV+ +GK ++ EFEGK+VYRHL+DGD+VLVNRQPTLHK
Sbjct: 489 LKLPLDRRSRSLTSRKLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHK 548
Query: 3547 PSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQY 3368
PSIMAHVVRVLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY
Sbjct: 549 PSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQY 608
Query: 3367 IVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSRKV 3188
+ PT GD +R LIQDHIVSA LLT KDTFL+ +EFNQLLY SGV G PG +K+
Sbjct: 609 VKPTSGDPIRALIQDHIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKI 668
Query: 3187 SLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYF---- 3020
+ +S+ M PA++KP PLWTGKQVI+ALL +IT+G P TV+ K+P +F
Sbjct: 669 FMSNSDSEMFLFPPAIFKPEPLWTGKQVISALLYYITKGSPPFTVEKNAKIPSSFFKTRM 728
Query: 3019 ------TDSTYKSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSN 2858
T T +DE D D KLLI++N+LVRGV+DKAQFG +G+VHTVQE YGSN
Sbjct: 729 REGKKRTKDTSIKKDEPDED-----KLLIYRNDLVRGVVDKAQFGDYGIVHTVQEFYGSN 783
Query: 2857 SAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEG-EDVGEEVHCNFVKF 2681
+AGI LSALSRLFT FLQ+HGFTCGVDDL++ D ER +LE E++G+ VH F+
Sbjct: 784 TAGILLSALSRLFTNFLQMHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGV 843
Query: 2680 KRG-QIGPEELQLEIEKVICSNRESATASLDMKMKNKLTDKGSQ-ISKKLLTKGLLKPFP 2507
G I P +QL +EK I SN E+A LD KM + L + S + K LL++G+LKP
Sbjct: 844 MEGDNIDPITMQLNVEKKIRSNGEAAITYLDRKMISNLNSRTSTGVLKVLLSEGILKPSG 903
Query: 2506 KNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGF 2327
KN IS+MTT+GAKGS VNFQQISS+LGQQELEGKRVPRMVSGKTLPCF+ WD + RAGGF
Sbjct: 904 KNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGF 963
Query: 2326 ITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDA 2147
I DRFLT LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKV YD+TVRDA
Sbjct: 964 IIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDA 1023
Query: 2146 DGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETI----CRKFQNKREFNTYIEKLPDGL 1979
DGSIIQF+YGEDGVDVH+TSF+ F+AL+ N+E + CR+ + YI KLPD L
Sbjct: 1024 DGSIIQFHYGEDGVDVHQTSFINKFEALSTNKELVYSNCCRELDKS---SPYINKLPDAL 1080
Query: 1978 EKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQK 1799
+ +A FI ++ ++R + FL L+E K
Sbjct: 1081 KGKAEKFILDSSS---------------------------KQRNSGSMTHTNFLHLMEHK 1113
Query: 1798 YLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTI 1619
Y+SSLAQ GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEIL AS I
Sbjct: 1114 YVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILTAASAHI 1173
Query: 1618 KTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVE---LSINHQQVARIYKLKMN 1448
KTP +TCP + D + L +KK+++AD+ ESM+V +++ ++ IYKL M
Sbjct: 1174 KTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDGRICSIYKLMMK 1233
Query: 1447 L-------KATEFVSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNF-TLSSPSET 1292
L K T+ V+L+D TLR +F+R LEDAIEN++ L+++SGI NF T + P+ +
Sbjct: 1234 LHKPKHYPKYTD-VTLKDWEETLRVSFVRGLEDAIENNIALLAKISGITNFKTDAQPNSS 1292
Query: 1291 LTEADNNSTVRSXXXXXXXXXXXXXERGEDLGSDVQKRKQQSTDEMDYDDGSEAEP-DEG 1115
D+ S ++ E EDLG D QK K+Q D++DYDDG E E ++G
Sbjct: 1293 NGAEDDPSNGKTNDDDDDDGDADDTEGAEDLGLDAQKSKRQVVDDVDYDDGPEEETLEDG 1352
Query: 1114 ELSSELEKGQTYQDHLEEADNRKXXXXXXXXXXEASNMQNDRETKSESKSSRAGAKSTAK 935
ELS +LE + +D+ D+ + +D E K GA +
Sbjct: 1353 ELSEDLEGVEDAKDNEYVKDD---GDGKDDEDGKGDEDGSDIEVNENDKKVTLGANYSQG 1409
Query: 934 TNEKSGEEFSDKKPRRAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYIKSSGKI 755
E S + KK R +Y+ + HFE+HFKFT EPH+LLAQIAQKTA+KV I++ GK+
Sbjct: 1410 PEENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTGEPHILLAQIAQKTAEKVCIQNFGKV 1469
Query: 754 SHCKMVKYDADEKTVIWDDDKKPKK--STVKDLQTDNEDLAYWAMKASGVDFKSFWEMQD 581
CK + +DD K ++ S+VK+ A++ SG+ FKSFWEMQD
Sbjct: 1470 GQCKAITCKESGVIYYGEDDSKREEIPSSVKE--------KIPALQTSGIHFKSFWEMQD 1521
Query: 580 DLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGVKIDYRHLSLIADYMTHAGG 401
DL++ +YSNN+ A+L TYGVEAA+ TIIREV+ VF YG+ ++ RHL LIAD+MTH+G
Sbjct: 1522 DLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHSGC 1581
Query: 400 YRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNLETPSSRICLGLPVKMGTGC 221
YRPM+R GSIA+S SPF+K+ FETAS FIVEAA HG DNL++PS+RICLGLPVKMGTGC
Sbjct: 1582 YRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKMGTGC 1641
Query: 220 FDLMQKLE 197
+L+QKLE
Sbjct: 1642 HELIQKLE 1649
>ref|XP_012574995.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1654
Score = 1719 bits (4453), Expect = 0.0
Identities = 932/1750 (53%), Positives = 1165/1750 (66%), Gaps = 33/1750 (1%)
Frame = -3
Query: 5347 MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKLTNPNLLDTLEKPITGGLYDPAMGPLDE 5168
MA +TEGAT +V+AV F F+TDEE+ S VK+TNP LLDTL P+ GGLYDPA+GP E
Sbjct: 1 MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60
Query: 5167 NFACKSCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCFHFRSSRGEVKNC 4988
C+SCGQ SYHCPGH GHI+LVSP YNPL+F+ML N+L +TCF C HF++SR EV+
Sbjct: 61 KSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELR 120
Query: 4987 VTQLEQIAEGDIIGAKRLNIHQKIKEXXXXXXXXXXXXXXXXDSEGSHISDVELHSDRQK 4808
QLE I +G+I AK L+ E + + D + D Q
Sbjct: 121 ANQLELIMKGNIAKAKNLD--------------------EINLDESADLCDGD---DSQC 157
Query: 4807 HSEHNKQGCWDSCQFTEAIYVLNEFLXXXXXXXXXXXXXXXXXXKPTFGWFHMSGLSGNQ 4628
S W S QF+EA+ VL +FL PTFGWFH+ LS Q
Sbjct: 158 SSAEQLGENWTSLQFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQ 217
Query: 4627 IRSNATRHSRLGVPQNVGVEDKXXXXXXXXXXXSWKXXXXXXXXXXXXXXXXSTKKSKKK 4448
R+N + + + + +D S
Sbjct: 218 ARANVISGNDVSLASEIIHDD--------------------ISLGNGDTTDVEDITSGDI 257
Query: 4447 PMHQARNFSQELEKPKNYFSGPLLPSEVRDIVRRLWENEAPICSYICDIXXXXXQHGESG 4268
A+ ++E + + +G LLPS+V+ I+ LWEN+A +C YI DI G
Sbjct: 258 ANSNAKRHNKEKQISSHTLAGSLLPSQVQRILELLWENDARLCLYISDIQGLGI-----G 312
Query: 4267 KVTSHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNAHVNSAERS 4088
K HSMFFLE+I VPPIKFRPP KG D V EH T+LL +VL+SNI+LG AH+N ++ S
Sbjct: 313 KKAGHSMFFLENIYVPPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDAS 372
Query: 4087 KFINRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRS 3908
+ RWMDLQ+S+N+L+D+KTA+G +KD+ +GICQLLEKKEGIFRQKMMGKRVN+ACRS
Sbjct: 373 VVLRRWMDLQRSVNLLFDNKTASG--QKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRS 430
Query: 3907 VISPDPYLAVNEIGVPPYFALRLTYPERVTPWNSVKLRNAIINGPDIHPGATTYVDKVST 3728
VISPDPYLAVNEIG+PPYFALRLTYPERVTPWN V+LRNAI+NGP+ HPGAT Y DK ST
Sbjct: 431 VISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTST 490
Query: 3727 VKLPSNKKMRIAISRKLPSSRGVVTQSGKKNEYEFEGKIVYRHLQDGDIVLVNRQPTLHK 3548
+KLP +++ R SR+L SSRGV+ +GK ++ EFEGK+VYRHL+DGD+VLVNRQPTLHK
Sbjct: 491 LKLPLDRRSRSLTSRRLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHK 550
Query: 3547 PSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQY 3368
PSIMAHVVRVLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY
Sbjct: 551 PSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQY 610
Query: 3367 IVPTRGDTVRGLIQDHIVSAVLLTMKDTFLTRDEFNQLLYGSGVFAMMPGSHPGNNSRKV 3188
+ PT GD +R LIQDHIVSA LLT KDTFL+ +EFNQLLY SGV G PG +K+
Sbjct: 611 VKPTSGDPIRALIQDHIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKI 670
Query: 3187 SLVDSEGVMQSVLPAVWKPGPLWTGKQVITALLNHITRGCAPCTVKNQGKLPKDYF---- 3020
+ +S+ M PA++KP PLWTGKQVI+ALL +IT+G P TV+ K+P +F
Sbjct: 671 FMSNSDSEMFLFPPAIFKPEPLWTGKQVISALLYYITKGSPPFTVEKNAKIPSSFFKTRM 730
Query: 3019 ------TDSTYKSEDEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSN 2858
T T +DE D D KLLI+KN+LVRGV+DKAQFG +G+VHTVQE YGSN
Sbjct: 731 REGKKRTKDTSIKKDEPDED-----KLLIYKNDLVRGVVDKAQFGDYGIVHTVQEFYGSN 785
Query: 2857 SAGIFLSALSRLFTIFLQIHGFTCGVDDLIILPNYDKERKEKLEG-EDVGEEVHCNFVKF 2681
+AG LSALSRLFT FLQ+HGFTCGVDDL++ D ER +LE E++G+ VH F+
Sbjct: 786 TAGFLLSALSRLFTNFLQMHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGV 845
Query: 2680 KRG-QIGPEELQLEIEKVICSNRESATASLDMKMKNKLTDK-GSQISKKLLTKGLLKPFP 2507
G I P +QL +EK I SN E+A LD KM + L + S + K+LL++G+LKP
Sbjct: 846 MEGDNIDPITMQLNVEKKIRSNGEAAITYLDRKMISNLNSRTSSGVLKELLSEGILKPSG 905
Query: 2506 KNCISVMTTTGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWDFTSRAGGF 2327
KN IS+MTT+GAKGS VNFQQISS+LGQQELEGKRVPRMVSGKTLPCF+ WD + RAGGF
Sbjct: 906 KNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGF 965
Query: 2326 ITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDA 2147
I DRFLT LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKV YD+TVRDA
Sbjct: 966 IIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDA 1025
Query: 2146 DGSIIQFYYGEDGVDVHRTSFLKNFKALADNQETI----CRKFQNKREFNTYIEKLPDGL 1979
DGSIIQF+YGEDGVDVH+TSF+ F+AL+ N+E + CR+ E + YI KLPD L
Sbjct: 1026 DGSIIQFHYGEDGVDVHQTSFINKFEALSTNKELVYSNCCRELD---ESSPYINKLPDAL 1082
Query: 1978 EKEARHFIREARKETSEVQKPTEKEHLPKGRKAKRKENQLEERKATEKEQNEFLELIEQK 1799
+ +A FIR++ ++R + FL+L+E K
Sbjct: 1083 KGKAEKFIRDSSS---------------------------KQRNSGSMTHTNFLQLMEHK 1115
Query: 1798 YLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTI 1619
Y+SSLAQ GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEIL AS I
Sbjct: 1116 YVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILTAASAHI 1175
Query: 1618 KTPILTCPFMQYRYKPDVMYLVSNVKKVSIADLAESMEVE---LSINHQQVARIYKLKMN 1448
KTP +TCP + D + L +KK+++AD+ ESM+V +++ ++ IYKL M
Sbjct: 1176 KTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDGRICSIYKLMMK 1235
Query: 1447 L-------KATEFVSLEDLHATLRSTFLRELEDAIENHVVFLSRVSGIKNFTLSSPSETL 1289
L K T+ V+L+D TLR +F+R LEDAIEN++ L+++SGI NF + +
Sbjct: 1236 LHKPKHYPKYTD-VTLKDWEETLRVSFVRGLEDAIENNIALLAKISGITNFKTDAQPNSS 1294
Query: 1288 TEAD---NNSTVRSXXXXXXXXXXXXXERGEDLGSDVQKRKQQSTDEMDYDDGSEAEP-D 1121
A+ +N E EDLG D QK K+Q D++DYDDG E E +
Sbjct: 1295 NGAEDDPSNGKTNDDDDDDDDGDADDTEGAEDLGLDAQKSKRQVVDDVDYDDGPEEETLE 1354
Query: 1120 EGELSSELEKGQTYQDHLEEADNRKXXXXXXXXXXEASNMQNDRETKSESKSSRAGAKST 941
+GELS +LE + +D+ D+ + +D E K G +
Sbjct: 1355 DGELSEDLEGVEDAKDNEHVKDD---GDGKDDEDGKGDEDGSDIEVNENDKKVTLGVNYS 1411
Query: 940 AKTNEKSGEEFSDKKPRRAIYIAVKGLHFEVHFKFTMEPHLLLAQIAQKTAKKVYIKSSG 761
E S + KK R +Y+ + HFE+HFKFT EPH+LLAQIAQKTA+KV I++ G
Sbjct: 1412 QGPEENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTDEPHILLAQIAQKTAEKVCIQNFG 1471
Query: 760 KISHCKMVKYDADEKTVIWDDDKKPKK--STVKDLQTDNEDLAYWAMKASGVDFKSFWEM 587
K+ CK + +DD K ++ S+VK+ A++ SG+ FKSFWEM
Sbjct: 1472 KVGQCKAITCKESGVIYYGEDDSKREEIPSSVKE--------KIPALQTSGIHFKSFWEM 1523
Query: 586 QDDLDLSRLYSNNIDAMLKTYGVEAARATIIREVKQVFDIYGVKIDYRHLSLIADYMTHA 407
QDDL++ +YSNN+ A+L TYGVEAA+ TIIREV+ VF YG+ ++ RHL LIAD+MTH+
Sbjct: 1524 QDDLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHS 1583
Query: 406 GGYRPMTRHGSIAESLSPFIKMSFETASKFIVEAASHGMTDNLETPSSRICLGLPVKMGT 227
G YRPM+R GSIA+S SPF+K+ FETAS FIVEAA HG DNL++PS+RICLGLPVKMGT
Sbjct: 1584 GCYRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKMGT 1643
Query: 226 GCFDLMQKLE 197
GC +L+QKLE
Sbjct: 1644 GCHELIQKLE 1653