BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00009392
         (1365 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011101336.1| PREDICTED: general transcription factor IIH ...   458   e-126
ref|XP_012829347.1| PREDICTED: general transcription factor IIH ...   442   e-121
ref|XP_009626298.1| PREDICTED: general transcription factor IIH ...   421   e-115
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ...   417   e-114
ref|XP_004241513.1| PREDICTED: general transcription factor IIH ...   417   e-114
ref|XP_009776618.1| PREDICTED: general transcription factor IIH ...   417   e-113
emb|CDP12389.1| unnamed protein product [Coffea canephora]            388   e-105
ref|XP_002284465.2| PREDICTED: general transcription factor IIH ...   380   e-102
emb|CBI19033.3| unnamed protein product [Vitis vinifera]              380   e-102
ref|XP_010675067.1| PREDICTED: general transcription factor IIH ...   380   e-102
ref|XP_010999370.1| PREDICTED: general transcription factor IIH ...   375   e-101
ref|XP_009363173.1| PREDICTED: general transcription factor IIH ...   374   e-100
ref|XP_010273663.1| PREDICTED: general transcription factor IIH ...   373   e-100
ref|XP_007019036.1| Basal transcription factor complex subunit-r...   371   e-100
ref|XP_008391898.1| PREDICTED: general transcription factor IIH ...   371   e-100
ref|XP_002307429.2| basal transcription factor complex subunit-r...   371   e-100
ref|XP_008219657.1| PREDICTED: general transcription factor IIH ...   369   3e-99
ref|XP_012078222.1| PREDICTED: general transcription factor IIH ...   365   3e-98
ref|XP_004290858.1| PREDICTED: general transcription factor IIH ...   363   2e-97
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ...   363   2e-97

>ref|XP_011101336.1| PREDICTED: general transcription factor IIH subunit 3 [Sesamum
            indicum] gi|747106105|ref|XP_011101337.1| PREDICTED:
            general transcription factor IIH subunit 3 [Sesamum
            indicum]
          Length = 292

 Score =  458 bits (1179), Expect = e-126
 Identities = 225/291 (77%), Positives = 238/291 (81%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            MTPV+ K+YTDDVSLLMVLIDTNPFFWNS+ S L FSK                      
Sbjct: 1    MTPVSVKLYTDDVSLLMVLIDTNPFFWNSVKSALPFSKFLSHVLAFLNAIVLLNQLNQVV 60

Query: 956  XIATGYNSCDYIFDSAASQNHNQRAENLLQKLEDFVHKDESLCCDDSVDGPGFXXXXXXX 777
             IATGYNSCDYIFDS+ S+   QRAE+LLQKLEDFV+KDESLC +DSVDGPGF       
Sbjct: 61   VIATGYNSCDYIFDSSTSEGQTQRAEHLLQKLEDFVNKDESLCREDSVDGPGFSLLSGSL 120

Query: 776  XXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPIDSCIMGAQ 597
               LCYIQ+VFRSGPLHP PRILCLHGSPDGPGQYVAIMN+IFSAQRSMVPIDSC++GAQ
Sbjct: 121  SMALCYIQRVFRSGPLHPHPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDSCVIGAQ 180

Query: 596  HSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDFRASCFCH 417
            HSAFLQQASYITGGVYLKPQ LDGLFQYLSTVFATDLHSR FLQLPKP GVDFRASCFCH
Sbjct: 181  HSAFLQQASYITGGVYLKPQLLDGLFQYLSTVFATDLHSRGFLQLPKPAGVDFRASCFCH 240

Query: 416  KNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRKNSVD 264
            KNTIDMGYICSVCLSIFCKH KKCSTCGS FGQ   QDSSTPDRKRK  +D
Sbjct: 241  KNTIDMGYICSVCLSIFCKHQKKCSTCGSVFGQAPVQDSSTPDRKRKTPMD 291


>ref|XP_012829347.1| PREDICTED: general transcription factor IIH subunit 3 [Erythranthe
            guttatus] gi|604297450|gb|EYU17663.1| hypothetical
            protein MIMGU_mgv1a011002mg [Erythranthe guttata]
          Length = 295

 Score =  442 bits (1138), Expect = e-121
 Identities = 217/294 (73%), Positives = 239/294 (81%), Gaps = 3/294 (1%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            MTPV+SK+YTDDVSLL+VLIDTNPFFWNS+ S L FSK                      
Sbjct: 1    MTPVSSKLYTDDVSLLVVLIDTNPFFWNSVKSNLPFSKFISHVLAFLNSILLVNQQNQVV 60

Query: 956  XIATGYNSCDYIFDSAASQNHNQRAENLLQKLEDFVHKDESLCCDDSVDGPGFXXXXXXX 777
             +ATG+NSCDY+FDS+ +Q+ NQRAE+LLQKLE+FV KDESLC ++SVDG GF       
Sbjct: 61   VLATGHNSCDYVFDSSVAQSQNQRAEHLLQKLEEFVDKDESLCREESVDGQGFSLLSGSL 120

Query: 776  XXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPIDSCIMGAQ 597
               LCYIQ+VFRSGPLHP PRILCLHGSPDGPGQYVAIMN+IFSAQRSMVPID+C++G Q
Sbjct: 121  SMALCYIQRVFRSGPLHPHPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDACVIGTQ 180

Query: 596  HSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDFRASCFCH 417
            HSAFLQQASYITGGVYLKPQ LDGLFQYLSTVFATDLHSR+FLQLPKP GVDFRASCFCH
Sbjct: 181  HSAFLQQASYITGGVYLKPQLLDGLFQYLSTVFATDLHSRAFLQLPKPAGVDFRASCFCH 240

Query: 416  KNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSST---PDRKRKNSVD 264
            KNTIDMGYICSVCLSIFCKH KKCSTCGS FGQ Q QDSST   P+ KRK  +D
Sbjct: 241  KNTIDMGYICSVCLSIFCKHQKKCSTCGSVFGQAQAQDSSTPPNPNPKRKTPMD 294


>ref|XP_009626298.1| PREDICTED: general transcription factor IIH subunit 3 [Nicotiana
            tomentosiformis]
          Length = 288

 Score =  421 bits (1081), Expect = e-115
 Identities = 208/287 (72%), Positives = 235/287 (81%), Gaps = 1/287 (0%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSI-NSTLSFSKXXXXXXXXXXXXXXXXXXXXX 960
            MTPV+SK+YTDDVSLLMVLIDTNP+FW+S+ N+  +FSK                     
Sbjct: 1    MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 959  XXIATGYNSCDYIFDSAASQNHNQRAENLLQKLEDFVHKDESLCCDDSVDGPGFXXXXXX 780
              IATGY+SCDY+FDS++S    QRAE LL+KLE+FV KDESL  +DSVDG GF      
Sbjct: 61   VVIATGYHSCDYVFDSSSSM---QRAECLLEKLEEFVDKDESLSQEDSVDGVGFSLLSGS 117

Query: 779  XXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPIDSCIMGA 600
                LCYIQ+VFR+GPLHP+PRILCLHGSPDGPGQYVA+MNAIFSAQRSMVPIDSC++G+
Sbjct: 118  LSMALCYIQRVFRTGPLHPQPRILCLHGSPDGPGQYVAVMNAIFSAQRSMVPIDSCVIGS 177

Query: 599  QHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDFRASCFC 420
            QHSAFLQQASYITGGVYLKPQ  DGLFQYLSTVFATDLHSR+FLQLP+PVGVDFRASCFC
Sbjct: 178  QHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRAFLQLPRPVGVDFRASCFC 237

Query: 419  HKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKR 279
            HKNTIDMGYICSVCLSIFCKHHKKCSTCGS+FG+ + QD S  D+KR
Sbjct: 238  HKNTIDMGYICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQKR 284


>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
            tuberosum]
          Length = 290

 Score =  417 bits (1073), Expect = e-114
 Identities = 206/287 (71%), Positives = 232/287 (80%), Gaps = 1/287 (0%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSI-NSTLSFSKXXXXXXXXXXXXXXXXXXXXX 960
            MTPV+SK+Y DDVSLLMVL+DTNP+FW+S+ N+  +F K                     
Sbjct: 1    MTPVSSKLYADDVSLLMVLVDTNPYFWSSMKNTAFTFPKFISHVLAFLNSILLLNQMNQV 60

Query: 959  XXIATGYNSCDYIFDSAASQNHNQRAENLLQKLEDFVHKDESLCCDDSVDGPGFXXXXXX 780
              IATGYNSCDY+FDS+ S    QRAE LL+KLEDFV KDESL  +DSVDG GF      
Sbjct: 61   VVIATGYNSCDYVFDSSTSSM--QRAECLLEKLEDFVDKDESLSQEDSVDGVGFSLLSGS 118

Query: 779  XXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPIDSCIMGA 600
                LCYIQ+VFRSGPLHP+PRILCLHGSPDGPGQYVA+MN+IFSAQRSMVPIDSC++G+
Sbjct: 119  LSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPIDSCVIGS 178

Query: 599  QHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDFRASCFC 420
            QHSAFLQQASYITGGVYLKPQ  DGLFQYLSTVFATDLHSRSFLQLP+PVGVDFRASCFC
Sbjct: 179  QHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRSFLQLPRPVGVDFRASCFC 238

Query: 419  HKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKR 279
            HKNTIDMG+ICSVCLSIFCKHHKKCSTCGS+FG+ + QD S  D++R
Sbjct: 239  HKNTIDMGFICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQRR 285


>ref|XP_004241513.1| PREDICTED: general transcription factor IIH subunit 3 [Solanum
            lycopersicum]
          Length = 290

 Score =  417 bits (1073), Expect = e-114
 Identities = 206/287 (71%), Positives = 232/287 (80%), Gaps = 1/287 (0%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSI-NSTLSFSKXXXXXXXXXXXXXXXXXXXXX 960
            MTPV+SK+Y DDVSLLMVL+DTNP+FW+S+ N+  +F K                     
Sbjct: 1    MTPVSSKLYADDVSLLMVLVDTNPYFWSSMKNTAFTFPKFISHVLAFLNSILLLNQMNQV 60

Query: 959  XXIATGYNSCDYIFDSAASQNHNQRAENLLQKLEDFVHKDESLCCDDSVDGPGFXXXXXX 780
              IATGYNSCDY+FDS+ S    QRAE LL+KLEDFV KDESL  +DSVDG GF      
Sbjct: 61   VVIATGYNSCDYVFDSSTSSM--QRAECLLEKLEDFVDKDESLSQEDSVDGVGFSLLSGA 118

Query: 779  XXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPIDSCIMGA 600
                LCYIQ+VFRSGPLHP+PRILCLHGSPDGPGQYVA+MN+IFSAQRSMVPIDSC++G+
Sbjct: 119  LSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPIDSCVIGS 178

Query: 599  QHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDFRASCFC 420
            QHSAFLQQASYITGGVYLKPQ  DGLFQYLSTVFATDLHSRSFLQLP+PVGVDFRASCFC
Sbjct: 179  QHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRSFLQLPRPVGVDFRASCFC 238

Query: 419  HKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKR 279
            HKNTIDMG+ICSVCLSIFCKHHKKCSTCGS+FG+ + QD S  D++R
Sbjct: 239  HKNTIDMGFICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQRR 285


>ref|XP_009776618.1| PREDICTED: general transcription factor IIH subunit 3 [Nicotiana
            sylvestris]
          Length = 291

 Score =  417 bits (1071), Expect = e-113
 Identities = 206/288 (71%), Positives = 234/288 (81%), Gaps = 1/288 (0%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSI-NSTLSFSKXXXXXXXXXXXXXXXXXXXXX 960
            MTPV+SK+YTDDVSLLMVLIDTNP+ W+S+ N+  +FSK                     
Sbjct: 1    MTPVSSKLYTDDVSLLMVLIDTNPYLWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 959  XXIATGYNSCDYIFDSAASQNHNQRAENLLQKLEDFVHKDESLCCDDSVDGPGFXXXXXX 780
              IATGYNSCDY+FDS++S    QRAE LL+KLE+FV KDE+L  +DSVDG GF      
Sbjct: 61   VVIATGYNSCDYVFDSSSSSM--QRAECLLEKLEEFVDKDETLSQEDSVDGVGFSLLSGS 118

Query: 779  XXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPIDSCIMGA 600
                LCYIQ+VFR+GPLHP+PRILCLHGSPDGPGQYVA+MNAIFSAQRSMVPIDSC++G+
Sbjct: 119  LSMALCYIQRVFRTGPLHPQPRILCLHGSPDGPGQYVAVMNAIFSAQRSMVPIDSCVIGS 178

Query: 599  QHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDFRASCFC 420
            QHSAFLQQASYITGGVYLKPQ  DGLFQYLSTVFATDLHSR+FLQLP+PVGVDFRASCFC
Sbjct: 179  QHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRAFLQLPRPVGVDFRASCFC 238

Query: 419  HKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            HKNTIDMGYICSVCLSIFCKHHKKCSTCGS+FG+ + QD S   ++RK
Sbjct: 239  HKNTIDMGYICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASGQRRK 286


>emb|CDP12389.1| unnamed protein product [Coffea canephora]
          Length = 287

 Score =  388 bits (996), Expect = e-105
 Identities = 198/285 (69%), Positives = 219/285 (76%), Gaps = 2/285 (0%)
 Frame = -2

Query: 1130 PVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXXXI 951
            PV SKI TDDVSLLMVLIDTNP FW+SI    SFSK                       I
Sbjct: 4    PVPSKILTDDVSLLMVLIDTNPHFWSSIKPHFSFSKFLSHVLAFLNSILLLNQLNQVVVI 63

Query: 950  ATGYNSCDYIFDSAASQNHNQRAENLLQKLEDFVHKDESLC--CDDSVDGPGFXXXXXXX 777
            ATG N+C Y+FDS+ S + +QRAE+LL KLE+F   DESL    DDS +G G        
Sbjct: 64   ATGINACGYVFDSS-SGSVSQRAESLLPKLEEFAENDESLSERDDDSGNGVGSSLLSGSL 122

Query: 776  XXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPIDSCIMGAQ 597
               LCYIQ+VFRSGPLHP+PRILCLHGSPDGPGQYVAIMN+IFSAQRSMVPIDSC++G Q
Sbjct: 123  SMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDSCVVGIQ 182

Query: 596  HSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDFRASCFCH 417
            HSAFLQQASYITGGVYLKPQ LDGLFQYL+TVFATDLHSR+FL+LPKPVGVDFRASCFCH
Sbjct: 183  HSAFLQQASYITGGVYLKPQQLDGLFQYLATVFATDLHSRNFLRLPKPVGVDFRASCFCH 242

Query: 416  KNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRK 282
            KNTIDMG+ICSVCLSIFCKH KKCSTCGS FGQ +T D S   ++
Sbjct: 243  KNTIDMGFICSVCLSIFCKHQKKCSTCGSTFGQAKTHDPSASQQR 287


>ref|XP_002284465.2| PREDICTED: general transcription factor IIH subunit 3 [Vitis
            vinifera]
          Length = 303

 Score =  380 bits (976), Expect = e-102
 Identities = 199/295 (67%), Positives = 221/295 (74%), Gaps = 8/295 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            M PV SK+Y+DDVSLL+VL+DTNPFFW++  ++L FSK                      
Sbjct: 7    MAPVPSKLYSDDVSLLVVLLDTNPFFWST--ASLPFSKFLSHVLAFLNSILLINQLNQVV 64

Query: 956  XIATGYNSCDYIFDSA---ASQN-HNQR----AENLLQKLEDFVHKDESLCCDDSVDGPG 801
             IATG NSC++IFDS+   A+ N  N R      NLLQKLE+FV  DE L  +    G G
Sbjct: 65   VIATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKLSKEVLAAGIG 124

Query: 800  FXXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPI 621
                       LCYIQ+VFR+GPLHP+PRILCL GSPDGP QYVA+MNAIFSAQRSMVPI
Sbjct: 125  SSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPI 184

Query: 620  DSCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVD 441
            DSC++GAQHSAFLQQASYITGGVYLKPQ LDGLFQYLSTVFATDLHSR FLQLPKP GVD
Sbjct: 185  DSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQLPKPAGVD 244

Query: 440  FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGS FGQ Q+  +S  DRKRK
Sbjct: 245  FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSATDRKRK 299


>emb|CBI19033.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  380 bits (976), Expect = e-102
 Identities = 199/295 (67%), Positives = 221/295 (74%), Gaps = 8/295 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            M PV SK+Y+DDVSLL+VL+DTNPFFW++  ++L FSK                      
Sbjct: 1    MAPVPSKLYSDDVSLLVVLLDTNPFFWST--ASLPFSKFLSHVLAFLNSILLINQLNQVV 58

Query: 956  XIATGYNSCDYIFDSA---ASQN-HNQR----AENLLQKLEDFVHKDESLCCDDSVDGPG 801
             IATG NSC++IFDS+   A+ N  N R      NLLQKLE+FV  DE L  +    G G
Sbjct: 59   VIATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKLSKEVLAAGIG 118

Query: 800  FXXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPI 621
                       LCYIQ+VFR+GPLHP+PRILCL GSPDGP QYVA+MNAIFSAQRSMVPI
Sbjct: 119  SSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPI 178

Query: 620  DSCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVD 441
            DSC++GAQHSAFLQQASYITGGVYLKPQ LDGLFQYLSTVFATDLHSR FLQLPKP GVD
Sbjct: 179  DSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQLPKPAGVD 238

Query: 440  FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGS FGQ Q+  +S  DRKRK
Sbjct: 239  FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSATDRKRK 293


>ref|XP_010675067.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
            [Beta vulgaris subsp. vulgaris]
            gi|870868920|gb|KMT19706.1| hypothetical protein
            BVRB_1g007610 [Beta vulgaris subsp. vulgaris]
          Length = 306

 Score =  380 bits (975), Expect = e-102
 Identities = 195/303 (64%), Positives = 225/303 (74%), Gaps = 16/303 (5%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSIN--STLSFSKXXXXXXXXXXXXXXXXXXXX 963
            M PVASK+YTDDVSL+++L+DTNP+FW S +  S+LSFS                     
Sbjct: 1    MAPVASKLYTDDVSLVVLLLDTNPYFWTSSSPSSSLSFSHFLSHVLSFVNSILLLNQLNQ 60

Query: 962  XXXIATGYNSCDYIFDSAASQ-----NHNQRAEN---------LLQKLEDFVHKDESLCC 825
               IATG+N+C YIFDS+ S      + NQ ++N         +++ LE+FV KDESL  
Sbjct: 61   VVIIATGHNTCGYIFDSSLSSVSSSISSNQSSDNATMPSFCSDVMKNLEEFVTKDESLSS 120

Query: 824  DDSVDGPGFXXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFS 645
             D V G             LCYIQ+VFRSGPLHP+PRILCLHGSPDGP QYVA+MNAIFS
Sbjct: 121  VDVVHGVDSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPEQYVAVMNAIFS 180

Query: 644  AQRSMVPIDSCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQ 465
            AQRSMVPIDSC++G QHSAFLQQASYITGGVYLKPQ L+GLFQYLSTVFATDLHSR+F+Q
Sbjct: 181  AQRSMVPIDSCVIGGQHSAFLQQASYITGGVYLKPQQLEGLFQYLSTVFATDLHSRNFIQ 240

Query: 464  LPKPVGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDR 285
            LPKPVGVDFRASCFCHKNTIDMGYICSVCLSIFC HHKKCSTCGS +G+ Q+  SST  +
Sbjct: 241  LPKPVGVDFRASCFCHKNTIDMGYICSVCLSIFCMHHKKCSTCGSLYGRAQSDASSTSGQ 300

Query: 284  KRK 276
            KRK
Sbjct: 301  KRK 303


>ref|XP_010999370.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
            [Populus euphratica] gi|743911031|ref|XP_010999371.1|
            PREDICTED: general transcription factor IIH subunit 3
            isoform X2 [Populus euphratica]
          Length = 298

 Score =  375 bits (962), Expect = e-101
 Identities = 194/295 (65%), Positives = 221/295 (74%), Gaps = 8/295 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            MT V SK+Y+DDVSLL+VL+DTNPFFW + +S+LSFS+                      
Sbjct: 1    MTSVPSKLYSDDVSLLVVLLDTNPFFWTA-SSSLSFSQFLSHVLAFVNSILLLNQLNQVV 59

Query: 956  XIATGYNSCDYIFDSA--ASQNHNQRAE------NLLQKLEDFVHKDESLCCDDSVDGPG 801
             IA+GYN+CDYI+DS+  ASQ  ++         NLLQKLE+F+ KDE L  + S     
Sbjct: 60   VIASGYNTCDYIYDSSSDASQLGSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIK 119

Query: 800  FXXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPI 621
                       LCYIQ+VFRSGPLHP+PRILCL GSPDGP QYVA+MNAIFSAQRSMVPI
Sbjct: 120  SSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPI 179

Query: 620  DSCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVD 441
            DSC +GA +SAFLQQASYITGGVY+KPQHLDGLFQYL+TVFATDLHSRSF+QLP+P GVD
Sbjct: 180  DSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQLPRPAGVD 239

Query: 440  FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            FRASCFCHK TIDMGYICSVCLSIFC HHKKCSTCGS FGQ Q+  SST D KRK
Sbjct: 240  FRASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGSVFGQAQSDTSSTSDLKRK 294


>ref|XP_009363173.1| PREDICTED: general transcription factor IIH subunit 3 [Pyrus x
            bretschneideri] gi|694371047|ref|XP_009363174.1|
            PREDICTED: general transcription factor IIH subunit 3
            [Pyrus x bretschneideri] gi|694371051|ref|XP_009363175.1|
            PREDICTED: general transcription factor IIH subunit 3
            [Pyrus x bretschneideri]
          Length = 297

 Score =  374 bits (959), Expect = e-100
 Identities = 195/295 (66%), Positives = 213/295 (72%), Gaps = 8/295 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            M    SK+Y DDVSLLMVL+DTNPFFW+S N  L FSK                      
Sbjct: 1    MASAPSKLYADDVSLLMVLLDTNPFFWSSSN--LPFSKFLPHVLTFLNSILLLNQLNQVV 58

Query: 956  XIATGYNSCDYIFDSAASQNHNQ--------RAENLLQKLEDFVHKDESLCCDDSVDGPG 801
             IATGYNSC YI+DS++  N           R  NLLQKLE+FV KDE L  + S +G  
Sbjct: 59   VIATGYNSCSYIYDSSSDSNQGSDHGRIMPARCSNLLQKLEEFVIKDEQLFKEGSREGIS 118

Query: 800  FXXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPI 621
                       LCYIQ+VFRSGPLHP+PRILCL GS DGP QYVAIMN+IFSAQRSMVPI
Sbjct: 119  SSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNSIFSAQRSMVPI 178

Query: 620  DSCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVD 441
            DSC MG+ +SAFLQQASYITGGVYLKPQ  +GLFQYLSTVFATDLHSR+FLQLPK +GVD
Sbjct: 179  DSCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAFLQLPKSLGVD 238

Query: 440  FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            FRASCFCHK TIDMGYICSVCLSIFCKHHKKCSTCGS FGQ Q   SST +RKRK
Sbjct: 239  FRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQLDASSTSNRKRK 293


>ref|XP_010273663.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
            [Nelumbo nucifera]
          Length = 303

 Score =  373 bits (958), Expect = e-100
 Identities = 193/301 (64%), Positives = 218/301 (72%), Gaps = 12/301 (3%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINST---LSFSKXXXXXXXXXXXXXXXXXXX 966
            M  + SK+Y+DDVSLL+VL+DTNPF W+  N+T   LSF K                   
Sbjct: 1    MASITSKLYSDDVSLLVVLLDTNPFLWSGENTTTNSLSFPKFLTHVFSFLNSILLLNQLN 60

Query: 965  XXXXIATGYNSCDYIFDSAASQNHNQRAEN---------LLQKLEDFVHKDESLCCDDSV 813
                IATG NSCDYI+DS++S    +  EN         LLQ LE+F+ +D+ L  D+S 
Sbjct: 61   QVVVIATGLNSCDYIYDSSSSPTTVESLENGRMPALCSKLLQNLEEFLARDQELNKDESP 120

Query: 812  DGPGFXXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRS 633
             G             LCYIQKVFRSGPLHP+PRILCL GS DGP QYVAIMNAIFSAQRS
Sbjct: 121  PGIASSLLSGSLSLALCYIQKVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQRS 180

Query: 632  MVPIDSCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKP 453
            MVPID+C++GAQHSAFLQQASYITGGVYLKP  LDGLFQYLSTVF+TDL SRSFLQLPKP
Sbjct: 181  MVPIDACVIGAQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFSTDLQSRSFLQLPKP 240

Query: 452  VGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRKN 273
            VGVDFRASCFCHK TIDMGYICSVCLSIFCKHHKKCSTCGS FGQ  +  ++T DRKRK 
Sbjct: 241  VGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAHSSATTTSDRKRKT 300

Query: 272  S 270
            +
Sbjct: 301  T 301


>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
            [Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
            transcription factor complex subunit-related isoform 1
            [Theobroma cacao]
          Length = 296

 Score =  371 bits (953), Expect = e-100
 Identities = 196/296 (66%), Positives = 217/296 (73%), Gaps = 9/296 (3%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            M    SK+Y DDVSL++VL+DTNPFFW++  S+LSFS+                      
Sbjct: 1    MASAPSKLYADDVSLVVVLVDTNPFFWSA--SSLSFSQFLSHVLAFLNAILTLNQLNQVV 58

Query: 956  XIATGYNSCDYIFDSAASQNHNQRAEN---------LLQKLEDFVHKDESLCCDDSVDGP 804
             IATGYNSC+YIFDS  S + NQ  EN         LLQKLE+F+ KDE L  +      
Sbjct: 59   VIATGYNSCNYIFDS--SSDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPEGRI 116

Query: 803  GFXXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVP 624
                        LCYIQ+VFRSG LHP PRILCL GSPDGP QYVAIMNAIFSAQRSMVP
Sbjct: 117  KSSLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVP 176

Query: 623  IDSCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGV 444
            IDSC MGAQ+SAFLQQASYITGGV+ KPQHLDGLFQYL T+FATDLHSRSFL LPKPVGV
Sbjct: 177  IDSCYMGAQNSAFLQQASYITGGVHHKPQHLDGLFQYLMTIFATDLHSRSFLHLPKPVGV 236

Query: 443  DFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            DFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGS FGQ Q++ +ST D+KRK
Sbjct: 237  DFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASTSDKKRK 292


>ref|XP_008391898.1| PREDICTED: general transcription factor IIH subunit 3 [Malus
            domestica] gi|657998960|ref|XP_008391899.1| PREDICTED:
            general transcription factor IIH subunit 3 [Malus
            domestica]
          Length = 297

 Score =  371 bits (952), Expect = e-100
 Identities = 194/295 (65%), Positives = 212/295 (71%), Gaps = 8/295 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            M   ASK+Y DDVSLLMVL+DTNPFFW+S N  L FSK                      
Sbjct: 1    MASAASKLYADDVSLLMVLLDTNPFFWSSSN--LPFSKFLPHVLAFLNSILLLNQLNQVV 58

Query: 956  XIATGYNSCDYIFDSAASQNHNQ--------RAENLLQKLEDFVHKDESLCCDDSVDGPG 801
             I TGYNSC YI+DS++  N           R   LLQKLE+FV KDE L  + S +G  
Sbjct: 59   VIXTGYNSCSYIYDSSSDSNQGSDHGRIMPARCSXLLQKLEEFVIKDEQLFKEGSREGIS 118

Query: 800  FXXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPI 621
                       LCYIQ+VFRSGPLHP+PRILCL GS DGP QYVAIMN+IFSAQRSMVPI
Sbjct: 119  SSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNSIFSAQRSMVPI 178

Query: 620  DSCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVD 441
            DSC MG+ +SAFLQQASYITGGVYLKPQ  +GLFQYLSTVFATDLHSR+FLQLPK +GVD
Sbjct: 179  DSCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAFLQLPKSLGVD 238

Query: 440  FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            FRASCFCHK TIDMGYICSVCLSIFCKHHKKCSTCGS FGQ Q   SST +RKRK
Sbjct: 239  FRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQLDASSTSNRKRK 293


>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
            [Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
            transcription factor complex subunit-related family
            protein [Populus trichocarpa]
          Length = 298

 Score =  371 bits (952), Expect = e-100
 Identities = 193/295 (65%), Positives = 219/295 (74%), Gaps = 8/295 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            MT V SK+Y+DDVSL++VL+DTNPFFW    S+LSFS+                      
Sbjct: 1    MTSVPSKLYSDDVSLVVVLLDTNPFFWTP-PSSLSFSQFLSHVLAFVNSILLLNQLNQVV 59

Query: 956  XIATGYNSCDYIFDSA--ASQNHNQRAE------NLLQKLEDFVHKDESLCCDDSVDGPG 801
             IA+GYN+CDYI+DS+  ASQ  ++         NLLQKLE+F+ KDE L  + S     
Sbjct: 60   VIASGYNTCDYIYDSSSDASQLGSEDGRMPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIK 119

Query: 800  FXXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPI 621
                       LCYIQ+VFRSGPLHP+PRILCL GSPDGP QYVA+MNAIFSAQRSMVPI
Sbjct: 120  SSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPI 179

Query: 620  DSCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVD 441
            DSC +GA +SAFLQQASYITGGVY+KPQHLDGLFQYL+TVFATDLHSRSF+QLP+P GVD
Sbjct: 180  DSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQLPRPAGVD 239

Query: 440  FRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            FRASCFCHK TIDMGYICSVCLSIFC HHKKCSTCGS FGQ Q+  SST D KRK
Sbjct: 240  FRASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGSVFGQAQSDTSSTSDLKRK 294


>ref|XP_008219657.1| PREDICTED: general transcription factor IIH subunit 3 [Prunus mume]
          Length = 296

 Score =  369 bits (947), Expect = 3e-99
 Identities = 193/294 (65%), Positives = 213/294 (72%), Gaps = 7/294 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            M    SK+Y DDVSLLMVL+DTNPFFW+S  S+L FS                       
Sbjct: 1    MASAPSKLYADDVSLLMVLLDTNPFFWSS--SSLPFSVFLSHVLTFLNSILLLNQLNQVV 58

Query: 956  XIATGYNSCDYIFDSAASQNHNQ-------RAENLLQKLEDFVHKDESLCCDDSVDGPGF 798
             IATGYNSC YI+DS+ S N          R  NLLQKLE+FV KDE L  +   +G   
Sbjct: 59   VIATGYNSCSYIYDSSTSTNQGSDNGRMPARCVNLLQKLEEFVIKDEQLIKEGLREGIAS 118

Query: 797  XXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPID 618
                      LCYIQ+VFRSGPLHP+PRILCL GS DGP QYVAIMNAIFSAQRSMVPID
Sbjct: 119  SLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 617  SCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDF 438
            SC MG+ +SAFLQQASYITGGVYLKPQ  +GLFQYLSTVFATDLHSR+FLQLPK +GVDF
Sbjct: 179  SCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAFLQLPKSLGVDF 238

Query: 437  RASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            RASCFCHK TIDMGYICSVCLSIFCKHHKKCSTCGS FGQ Q+  +ST ++KRK
Sbjct: 239  RASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDVNSTSNKKRK 292


>ref|XP_012078222.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
            [Jatropha curcas] gi|643723184|gb|KDP32789.1|
            hypothetical protein JCGZ_12081 [Jatropha curcas]
          Length = 296

 Score =  365 bits (938), Expect = 3e-98
 Identities = 187/294 (63%), Positives = 215/294 (73%), Gaps = 7/294 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            M  V SK+Y+DDVSL+MVL+DTNPFFW +  S+L FS+                      
Sbjct: 1    MASVPSKLYSDDVSLVMVLLDTNPFFWTT--SSLLFSQFLSHVLAFLNSILLLNQLNQVV 58

Query: 956  XIATGYNSCDYIFDSAASQNHNQRA-------ENLLQKLEDFVHKDESLCCDDSVDGPGF 798
             IATGYNSC+Y++DS+ + N +           NLLQ LE+F+ KDE L  ++S      
Sbjct: 59   VIATGYNSCNYVYDSSLAANQSSEDGRMPALYSNLLQALEEFMIKDEKLGKEESQGKIAS 118

Query: 797  XXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPID 618
                      LCYIQ+VFRSGPL+P+PRILCL GSPDGP QYVA+MNAIFSAQRSMVPID
Sbjct: 119  SLLSGSLSMALCYIQRVFRSGPLNPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 178

Query: 617  SCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDF 438
            SC +G+ +SAFLQQASYITGGVY+KPQHLDGLFQYL TVFATDLH RSFLQLP+P GVDF
Sbjct: 179  SCYVGSHNSAFLQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHCRSFLQLPRPAGVDF 238

Query: 437  RASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRK 276
            RASCFCHK TIDMGYICSVCLSIFCK HKKCSTCGS FGQ Q+ +SS  DRKRK
Sbjct: 239  RASCFCHKTTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQSQSDNSSASDRKRK 292


>ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
            [Fragaria vesca subsp. vesca]
          Length = 298

 Score =  363 bits (932), Expect = 2e-97
 Identities = 190/296 (64%), Positives = 212/296 (71%), Gaps = 7/296 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            M  V SK+Y DDVSLLMVL+DTNPFFW+S  S+L FSK                      
Sbjct: 1    MASVPSKLYADDVSLLMVLLDTNPFFWSS--SSLPFSKYLSHVLTFLNSILLLNQLNQVV 58

Query: 956  XIATGYNSCDYIFDSAASQNHNQR-------AENLLQKLEDFVHKDESLCCDDSVDGPGF 798
             IATGY+SC YI+DSA++               +LL+KLE+FV KDE L  + S +G   
Sbjct: 59   VIATGYSSCSYIYDSASAPGQGSDQGRMPALCSHLLKKLEEFVAKDEQLLKEGSAEGIPS 118

Query: 797  XXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPID 618
                      LCYIQKVFRSGP HP PRILCL GS DGP QYVAIMNAIFSAQRSMVPID
Sbjct: 119  SLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 617  SCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDF 438
            SC MG+ +SAFLQQASYITGGVYLKPQ  DGL QYL+TVFATDLHSR+FLQLPK  GVDF
Sbjct: 179  SCYMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLPKSAGVDF 238

Query: 437  RASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRKNS 270
            RASCFCHK TID GYICSVCLSIFCKHHKKCSTCGS FGQ Q++  ST ++KRK+S
Sbjct: 239  RASCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTTNKKRKSS 294


>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
            [Fragaria vesca subsp. vesca]
          Length = 300

 Score =  363 bits (932), Expect = 2e-97
 Identities = 190/296 (64%), Positives = 212/296 (71%), Gaps = 7/296 (2%)
 Frame = -2

Query: 1136 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKXXXXXXXXXXXXXXXXXXXXXX 957
            M  V SK+Y DDVSLLMVL+DTNPFFW+S  S+L FSK                      
Sbjct: 1    MASVPSKLYADDVSLLMVLLDTNPFFWSS--SSLPFSKYLSHVLTFLNSILLLNQLNQVV 58

Query: 956  XIATGYNSCDYIFDSAASQNHNQR-------AENLLQKLEDFVHKDESLCCDDSVDGPGF 798
             IATGY+SC YI+DSA++               +LL+KLE+FV KDE L  + S +G   
Sbjct: 59   VIATGYSSCSYIYDSASAPGQGSDQGRMPALCSHLLKKLEEFVAKDEQLLKEGSAEGIPS 118

Query: 797  XXXXXXXXXXLCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPID 618
                      LCYIQKVFRSGP HP PRILCL GS DGP QYVAIMNAIFSAQRSMVPID
Sbjct: 119  SLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 617  SCIMGAQHSAFLQQASYITGGVYLKPQHLDGLFQYLSTVFATDLHSRSFLQLPKPVGVDF 438
            SC MG+ +SAFLQQASYITGGVYLKPQ  DGL QYL+TVFATDLHSR+FLQLPK  GVDF
Sbjct: 179  SCYMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLPKSAGVDF 238

Query: 437  RASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSDFGQPQTQDSSTPDRKRKNS 270
            RASCFCHK TID GYICSVCLSIFCKHHKKCSTCGS FGQ Q++  ST ++KRK+S
Sbjct: 239  RASCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTTNKKRKSS 294